+E Ribosome biogenesis KO
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Ribosome Biogenesis - Streptococcus agalactiae NEM316 (serotype III)
%
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AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D gbs0745 Unknown K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C gbs1560 Unknown K03595 era; GTPase
C gbs1537 Unknown K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C nusA Unknown K02600 nusA; transcription termination/antitermination protein NusA
C gbs1737 Unknown K03625 nusB; transcription antitermination protein NusB
C gbs2017 Unknown K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D gbs0821 Unknown K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D gbs1541 unknown K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D gbs1822 Unknown K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D gbs0305 unknown K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D gbs0940 Unknown K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D gbs0499 Unknown K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D gbs1955 Unknown K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D gidB Unknown K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D gbs0275 unknown K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D gbs1623 Unknown K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D gbs0545 Unknown K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D gbs1821 Unknown K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D gbs0204 Unknown K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D gbs2132 Unknown K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D gbs1450 unknown K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D gbs0505 Unknown K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D gbs0545 Unknown K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D gbs0613 Unknown K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D gbs1642 Unknown K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D gbs1435 unknown K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D gbs2021 Unknown K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D gbs1160 unknown K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C gbs1801 Unknown K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C gbs0245 unknown K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
C gbs1425 unknown K02860 rimM; 16S rRNA processing protein RimM
C gbs1956 Unknown K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C gbs0745 Unknown K03685 rnc; ribonuclease III [EC:3.1.26.3]
C gbs2044 Unknown K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
C gbs0203 Unknown K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
B rRNA helicases
C gbs0797 Unknown K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
C gbs0279 unknown K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
B GTPases
C gbs1560 Unknown K03595 era; GTPase
C gbs1820 Unknown K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
C gbs1667 Unknown K03977 engA; GTPase
C gbs1537 Unknown K03979 obgE; GTPase [EC:3.6.5.-]
C gbs1048 Unknown K14540 rbgA; ribosome biogenesis GTPase A
C gbs1284 Unknown K03665 hflX; GTPase
C gbs1708 Unknown K06948 yqeH; 30S ribosome assembly GTPase
B Other maturation factors
C gbs1107 Unknown K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C relA Unknown K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C rbfA ribosome binding factor A K02834 rbfA; ribosome-binding factor A
C gbs0413 unknown K09748 rimP; ribosome maturation factor RimP
C gbs2114 Unknown K14761 rlbA; ribosome-associated protein
C gbs1703 unknown K09710 ybeB; ribosome-associated protein
C gbs1562 Unknown K07042 ybeY; probable rRNA maturation factor
C gbs1707 Unknown K07574 yhbY; RNA-binding protein
C gbs0326 unknown K05808 hpf; ribosome hibernation promoting factor
C gbs0006 Unknown K06942 ychF; ribosome-binding ATPase
C gbs1673 Unknown K07040 yceD; DUF177 domain-containing protein
#
ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024