+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Salmonella bongori N268-08

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ACRISPR-Cas system B Universal Cas proteins C A464_2960 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 C A464_2959 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D A464_2966 CRISPR-associated helicase Cas3 protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors C Subtype I-B factors C Subtype I-C factors C Subtype I-D factors C Subtype I-E factors D A464_2965 CRISPR-associated protein Cse1 family K19123 casA; CRISPR system Cascade subunit CasA D A464_2964 CRISPR-associated protein Cse2 family K19046 casB; CRISPR system Cascade subunit CasB D A464_2963 CRISPR-associated protein Cse4 family K19124 casC; CRISPR system Cascade subunit CasC D A464_2962 CRISPR-associated protein Cas5e family K19125 casD; CRISPR system Cascade subunit CasD D A464_2961 CRISPR-associated protein Cse3 family K19126 casE; CRISPR system Cascade subunit CasE C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C A464_4492 Type I restriction-modification system restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C A464_4491 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C A464_4490 Type I restriction-modification systemDNA-methyl transferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D A464_3279 putative phage gene K06223 dam; DNA adenine methylase [EC:2.1.1.72] D A464_1373 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D A464_3561 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D A464_3466 Adenine-specific methyl transferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D A464_plas0077 Adenine-specific methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D A464_476 Putative methyl transferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D A464_2744 DNA-cytosine methyl transferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D A464_2141 DNA-cytosine methyl transferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C A464_310 Type III restriction-modification system StyLTI enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5] C A464_309 Type III restriction-modification system methylation subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR D A464_2169 hypothetical protein K19048 symE; toxic protein SymE D A464_4573 hypothetical protein K19048 symE; toxic protein SymE D A464_2171 hypothetical protein K19048 symE; toxic protein SymE C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB D A464_426 hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein D A464_427 hypothetical protein K19162 tomB; hha toxicity modulator TomB C PspC-PspB D A464_1770 Phage shock protein C K03973 pspC; phage shock protein C D A464_1771 Phage shock protein B K03970 pspB; phage shock protein B C CcdB-CcdA D A464_plas0093 CcdB toxin protein K19163 ccdB; toxin CcdB D A464_plas0094 CcdA protein (antitoxin to CcdB) K19164 ccdA; antitoxin CcdA C ParE-ParD D A464_plas0114 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 D A464_plas0115 putative transcriptional regulators, containing the CopG/Arc/MetJ DNA-binding domain protein K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd C HigB-HigA C MqsR-MqsA C VapC-VapB D A464_4438 virulence associated protein C K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D A464_plas0097 VagD K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D A464_plas0095 Virulence-associated protein vagC K18829 mvpT; antitoxin VapB D A464_4439 Virulence-associated protein vagC K18829 mvpT; antitoxin VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D A464_4457 Protein yjgK K19334 tabA; biofilm protein TabA D A464_1095 Putative cytoplasmic protein K12148 bssS; biofilm regulator BssS D A464_820 biofilm regulator BssR K19688 bssR; biofilm regulator BssR D A464_1149 Putative outer membrane protein K12151 bhsA; multiple stress resistance protein BhsA D A464_128 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D A464_3453 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D A464_3206 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D A464_3212 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D A464_2549 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D A464_3056 hypothetical protein K19168 cptA; toxin CptA D A464_3057 YgfY K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C A464_2655 Cysteine desulfurase IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023