+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Salmonella bongori N268-08
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ACRISPR-Cas system
B Universal Cas proteins
C A464_2960 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
C A464_2959 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D A464_2966 CRISPR-associated helicase Cas3 protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
C Subtype I-B factors
C Subtype I-C factors
C Subtype I-D factors
C Subtype I-E factors
D A464_2965 CRISPR-associated protein Cse1 family K19123 casA; CRISPR system Cascade subunit CasA
D A464_2964 CRISPR-associated protein Cse2 family K19046 casB; CRISPR system Cascade subunit CasB
D A464_2963 CRISPR-associated protein Cse4 family K19124 casC; CRISPR system Cascade subunit CasC
D A464_2962 CRISPR-associated protein Cas5e family K19125 casD; CRISPR system Cascade subunit CasD
D A464_2961 CRISPR-associated protein Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C A464_4492 Type I restriction-modification system restriction subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C A464_4491 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C A464_4490 Type I restriction-modification systemDNA-methyl transferase subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D A464_3279 putative phage gene K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D A464_1373 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D A464_3561 Methyl-directed repair DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D A464_3466 Adenine-specific methyl transferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D A464_plas0077 Adenine-specific methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D A464_476 Putative methyl transferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D A464_2744 DNA-cytosine methyl transferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D A464_2141 DNA-cytosine methyl transferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
C A464_310 Type III restriction-modification system StyLTI enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5]
C A464_309 Type III restriction-modification system methylation subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
D A464_2169 hypothetical protein K19048 symE; toxic protein SymE
D A464_4573 hypothetical protein K19048 symE; toxic protein SymE
D A464_2171 hypothetical protein K19048 symE; toxic protein SymE
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
D A464_426 hemolysin expression modulating protein K05839 hha; haemolysin expression modulating protein
D A464_427 hypothetical protein K19162 tomB; hha toxicity modulator TomB
C PspC-PspB
D A464_1770 Phage shock protein C K03973 pspC; phage shock protein C
D A464_1771 Phage shock protein B K03970 pspB; phage shock protein B
C CcdB-CcdA
D A464_plas0093 CcdB toxin protein K19163 ccdB; toxin CcdB
D A464_plas0094 CcdA protein (antitoxin to CcdB) K19164 ccdA; antitoxin CcdA
C ParE-ParD
D A464_plas0114 hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D A464_plas0115 putative transcriptional regulators, containing the CopG/Arc/MetJ DNA-binding domain protein K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
D A464_4438 virulence associated protein C K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D A464_plas0097 VagD K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D A464_plas0095 Virulence-associated protein vagC K18829 mvpT; antitoxin VapB
D A464_4439 Virulence-associated protein vagC K18829 mvpT; antitoxin VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D A464_4457 Protein yjgK K19334 tabA; biofilm protein TabA
D A464_1095 Putative cytoplasmic protein K12148 bssS; biofilm regulator BssS
D A464_820 biofilm regulator BssR K19688 bssR; biofilm regulator BssR
D A464_1149 Putative outer membrane protein K12151 bhsA; multiple stress resistance protein BhsA
D A464_128 Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D A464_3453 Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D A464_3206 Topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D A464_3212 Topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D A464_2549 Glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D A464_3056 hypothetical protein K19168 cptA; toxin CptA
D A464_3057 YgfY K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C A464_2655 Cysteine desulfurase IscS subfamily K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023