+D GENES KO
#
KEGG Orthology (KO) - Staphylococcus carnosus subsp. carnosus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:sca00010]
D SCA_1169 glcA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCA_0570 pgiA; glucose-6-phosphate isomerase A K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCA_1304 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCA_2412 conserved protein, similar to fructose-1,6-bisphosphatase, class II, fbp-1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCA_1964 fbp; putative fructose-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SCA_2144 fda; fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SCA_1628 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCA_0426 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCA_0424 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SCA_1293 gapB; glyceraldehyde 3-phosphate dehydrogenase 2 K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D SCA_0425 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SCA_1912 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_0032 gpm3; putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_1698 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_0427 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SCA_0428 eno; 2-phospho-D-glycerate hydrolase (enolase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCA_1303 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCA_1694 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SCA_0719 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SCA_0720 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SCA_0721 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_0932 putative pyruvate flavodoxin/ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SCA_0933 putative 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SCA_1369 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCA_0343 ldh; putative L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCA_2269 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_1338 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_2259 acsA; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_1834 putative aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SCA_0664 putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCA_1390 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SCA_1066 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCA_0999 glcA; glucose-specific phosphotransferase system enzyme II, factor IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SCA_1000 glcB; glucose-specific phosphotransferase system enzym II, factor IIB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:sca00020]
D SCA_1301 citZ; citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D SCA_0991 citB; aconitate hydratase (aconitase) K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SCA_1300 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SCA_1058 odhA; putatative 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SCA_1057 odhB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_0932 putative pyruvate flavodoxin/ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SCA_0933 putative 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SCA_0883 sucD; putative succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SCA_0882 sucC; putative succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SCA_0766 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SCA_0767 sdhB; succinate dehydrogenase iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SCA_0765 sdhC; succinate dehydrogenase cytochrome b-558 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SCA_1426 citG; fumarate hydratase, class-II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SCA_0338 mdh; putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SCA_1865 mqo; malate dehydrogenase (acceptor) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SCA_2266 mqo2; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SCA_0740 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D SCA_1390 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SCA_0719 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SCA_0720 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SCA_0721 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:sca00030]
D SCA_0570 pgiA; glucose-6-phosphate isomerase A K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCA_1130 zwf; putative glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SCA_1496 conserved hypothetical protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D SCA_1132 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SCA_0842 rpe; putative ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCA_0983 tkt; putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SCA_1381 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SCA_1833 rpi; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SCA_2413 conserved protein, similar to ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SCA_0711 putative hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D SCA_0226 putative hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D SCA_0225 putative sugar phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D SCA_0710 putative hexose phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D SCA_1640 dra; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SCA_2419 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D SCA_2011 drm; putative phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SCA_0664 putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCA_0150 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SCA_1743 gdh; putative glucose 1-dehydrogenase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47]
D SCA_1949 gntK; putative gluconokinase K25031 gntK; gluconokinase [EC:2.7.1.12]
D SCA_2144 fda; fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SCA_1628 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCA_2412 conserved protein, similar to fructose-1,6-bisphosphatase, class II, fbp-1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCA_1964 fbp; putative fructose-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SCA_1304 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:sca00040]
D SCA_2025 gtaB; UTP-glucose-1-phosphate uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2180 truncated UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2179 truncated UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_0842 rpe; putative ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCA_2036 xylB; putative xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
C 00051 Fructose and mannose metabolism [PATH:sca00051]
D SCA_2175 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SCA_2439 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SCA_1648 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SCA_1304 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCA_2412 conserved protein, similar to fructose-1,6-bisphosphatase, class II, fbp-1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCA_1964 fbp; putative fructose-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SCA_1661 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D SCA_2317 srlD; putative sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D SCA_0347 fruB; putative fructose 1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SCA_2144 fda; fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SCA_1628 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCA_0426 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCA_2413 conserved protein, similar to ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SCA_0348 fruA; putative fructose specific permease K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCA_2440 fruA; putative fructose phosphotransferase system enzyme fruA K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D SCA_1660 mtlF; PTS system, mannitol-specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCA_1658 mtlA; PTS system, mannitol-specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCA_2322 putative sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SCA_2321 putative sorbitol PTS, EIIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D SCA_2320 putative sorbitol PTS, EIIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:sca00052]
D SCA_1834 putative aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D SCA_1771 galK; galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6]
D SCA_1769 galT; Galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SCA_2065 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_1770 galE; UDP-glucose-4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_2099 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_2158 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_2025 gtaB; UTP-glucose-1-phosphate uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2180 truncated UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2179 truncated UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_0664 putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCA_1169 glcA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCA_1965 lacH; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SCA_0673 lacC; putative tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D SCA_1304 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCA_0672 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SCA_0675 lacA; putative galactose-6-phosphate isomerase LacA subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SCA_0674 lacB; putative galactose-6-phosphate isomerase LacB subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SCA_0669 lacG; putative 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SCA_0667 lacF; putative lactose-specific enzyme IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCA_0668 lacE; putative PTS system lactose-specific component IIBC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SCA_1550 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
C 00053 Ascorbate and aldarate metabolism [PATH:sca00053]
D SCA_2349 capI; capsular polysaccharide biosynthesis protein Cap I K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:sca00500]
D SCA_2138 putative PTS system, IIBC components K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCA_1550 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SCA_2025 gtaB; UTP-glucose-1-phosphate uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2180 truncated UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2179 truncated UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2342 putative glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SCA_2341 truncated putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SCA_1066 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCA_0110 treC; trehalose-6-phosphate hydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D SCA_0664 putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCA_1169 glcA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCA_0570 pgiA; glucose-6-phosphate isomerase A K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCA_2175 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:sca00520]
D SCA_1066 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCA_1332 putative PTS system IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SCA_2068 nagA; putative N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SCA_2393 nagB; glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SCA_0227 nagB; putative glucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SCA_2175 putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SCA_1657 glmS; putative glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SCA_1663 glmM; phosphoglucosamine-mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SCA_0149 gcaD; putative UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SCA_2139 putative glucokinase regulatory protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D SCA_1627 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SCA_1603 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SCA_0386 murB; putative UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SCA_2392 putative N-acylglucosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D SCA_2389 nanA; N-acetylneuraminate lyase subunit K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D SCA_1614 mnaA; UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SCA_2348 capL; capsular polysaccharide biosynthesis protein CapL K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D SCA_0999 glcA; glucose-specific phosphotransferase system enzyme II, factor IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SCA_1000 glcB; glucose-specific phosphotransferase system enzym II, factor IIB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SCA_1169 glcA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCA_0664 putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCA_2025 gtaB; UTP-glucose-1-phosphate uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2180 truncated UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2179 truncated UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_1771 galK; galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6]
D SCA_1769 galT; Galactose-1-phosphate uridylyltransferase GalT K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SCA_2065 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_1770 galE; UDP-glucose-4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_2099 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_2158 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_2349 capI; capsular polysaccharide biosynthesis protein Cap I K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SCA_0570 pgiA; glucose-6-phosphate isomerase A K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCA_2439 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SCA_1648 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
C 00620 Pyruvate metabolism [PATH:sca00620]
D SCA_1338 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_2259 acsA; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_0932 putative pyruvate flavodoxin/ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SCA_0933 putative 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SCA_0719 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SCA_0720 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SCA_0721 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_2017 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SCA_2269 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SCA_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SCA_0242 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCA_1303 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCA_1305 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SCA_1151 accB; putative acetyl-CoA carboxylase biotin carboxyl carrier subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCA_2040 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCA_2039 putative acetyl-CoA carboxylase (biotin carboxylase subunit), accC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCA_1150 accC; biotin carboxylase (subunit of acetyl-CoA carboxylase) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCA_1306 accD; acetyl-CoA carboxylase transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SCA_1047 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2406 fadX; putative acetyl-CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D SCA_1991 putative pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D SCA_1369 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCA_0343 ldh; putative L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCA_2121 ddh; D-specific D-2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SCA_1975 ddh; D-specific D-2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D SCA_0775 glx; putative glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SCA_1167 putative member of metallo-beta-lactamase superfamily K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SCA_1307 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SCA_0740 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D SCA_0338 mdh; putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SCA_1865 mqo; malate dehydrogenase (acceptor) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SCA_2266 mqo2; putative malate:quinone oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D SCA_1426 citG; fumarate hydratase, class-II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SCA_1390 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SCA_1694 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_1563 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:sca00630]
D SCA_1338 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_2259 acsA; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_0338 mdh; putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SCA_1301 citZ; citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1]
D SCA_0991 citB; aconitate hydratase (aconitase) K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2210 katE_B; putative catalase K03781 katE; catalase [EC:1.11.1.6]
D SCA_2336 katA; (Q9ZN99) Catalase (EC 1.11.1.6),InterPro: Catalase; Conserved hypothetical protein; Sca_2336 K03781 katE; catalase [EC:1.11.1.6]
D SCA_0533 putative D-isomer specific 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D SCA_0217 putative haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SCA_0957 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_2364 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_1616 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SCA_1160 gcvPA; putative glycine cleavage system P-protein subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D SCA_1158 gcvPB''; truncated glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (fragment 2) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SCA_1159 gcvPB'; truncated glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (fragment 1) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SCA_1161 gcvT; putative aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_0452 gcdH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D SCA_0390 putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SCA_2272 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SCA_1475 putative D-isomer specific 2-hydroxyacid dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D SCA_2135 fdh; putative NAD-dependent formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D SCA_1802 putative formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SCA_2142 fmdA; putative formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00640 Propanoate metabolism [PATH:sca00640]
D SCA_1338 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_2259 acsA; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_2406 fadX; putative acetyl-CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D SCA_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SCA_0242 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCA_1139 bfmBAA; putative branched-chain alpha-keto acid dehydrogenase E1 component alpha chain K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SCA_1138 bfmBAB; branched-chain alpha-keto acid dehydrogenase E1 component beta chain K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SCA_1137 bmfBB; putative dihydrolipoamide branched chain transacylase (E2) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_2017 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SCA_1870 conserved hypothetical protein K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D SCA_1305 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SCA_1151 accB; putative acetyl-CoA carboxylase biotin carboxyl carrier subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCA_2040 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCA_2039 putative acetyl-CoA carboxylase (biotin carboxylase subunit), accC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCA_1150 accC; biotin carboxylase (subunit of acetyl-CoA carboxylase) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCA_1306 accD; acetyl-CoA carboxylase transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SCA_0283 putative aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SCA_0882 sucC; putative succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SCA_0883 sucD; putative succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SCA_1369 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCA_0343 ldh; putative L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:sca00650]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2409 putative fatty oxidation complex protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SCA_1141 buk; butyrate kinase (branched-chain carboxylic acid kinase) K00929 buk; butyrate kinase [EC:2.7.2.7]
D SCA_1142 putative phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D SCA_0766 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SCA_0767 sdhB; succinate dehydrogenase iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SCA_0765 sdhC; succinate dehydrogenase cytochrome b-558 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SCA_0283 putative aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SCA_2374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SCA_2363 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SCA_2017 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SCA_0932 putative pyruvate flavodoxin/ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SCA_0933 putative 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SCA_1885 mvaS; putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SCA_2369 adc; putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D SCA_1560 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SCA_1561 ilvH; putative acetolactate synthase small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SCA_1958 putative alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SCA_2335 gutB; alcohol dehydrogenase, zinc-containing K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
D SCA_0065 putative short chain dehydrogenase SDR K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:sca00660]
D SCA_1560 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SCA_1561 ilvH; putative acetolactate synthase small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SCA_1958 putative alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SCA_0882 sucC; putative succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SCA_0883 sucD; putative succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SCA_1565 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SCA_1566 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SCA_1564 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:sca00562]
D SCA_0733 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SCA_1806 conserved hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SCA_0426 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:sca00190]
D SCA_0543 putative pyridine nucleotide-disulphide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SCA_0546 putative NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D SCA_0766 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SCA_0767 sdhB; succinate dehydrogenase iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SCA_0765 sdhC; succinate dehydrogenase cytochrome b-558 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SCA_0742 ctaB; putative protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D SCA_0741 ctaA; putative heme A synthase CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SCA_0678 qoxD; putative quinol oxidase polypeptide IV K02829 qoxD; cytochrome aa3-600 menaquinol oxidase subunit IV [EC:7.1.1.5]
D SCA_0679 qoxC; putative quinol oxidase polypeptide III K02828 qoxC; cytochrome aa3-600 menaquinol oxidase subunit III [EC:7.1.1.5]
D SCA_0680 qoxB; quinol oxidase polypeptide I QoxB K02827 qoxB; cytochrome aa3-600 menaquinol oxidase subunit I [EC:7.1.1.5]
D SCA_0681 qoxA; putative quinol oxidase polypeptide II QoxA K02826 qoxA; cytochrome aa3-600 menaquinol oxidase subunit II [EC:7.1.1.5]
D SCA_0707 putative cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SCA_0708 putative cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SCA_1608 atpA''; truncated ATP synthase alpha chain (fragment 2) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SCA_1606 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SCA_1607 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SCA_1610 atpH; putative ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SCA_1605 atpE; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SCA_1613 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SCA_1611 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SCA_1612 atpE; putative ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SCA_1491 ppaC; putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D SCA_1945 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:sca00710]
D SCA_0425 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SCA_0424 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SCA_1293 gapB; glyceraldehyde 3-phosphate dehydrogenase 2 K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D SCA_2144 fda; fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SCA_1628 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCA_2412 conserved protein, similar to fructose-1,6-bisphosphatase, class II, fbp-1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCA_1964 fbp; putative fructose-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SCA_0983 tkt; putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SCA_1833 rpi; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SCA_2413 conserved protein, similar to ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D SCA_0426 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCA_0842 rpe; putative ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SCA_1381 putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D SCA_1390 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SCA_1694 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SCA_0338 mdh; putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:sca00720]
D SCA_1694 ppdK; pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D SCA_0740 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D SCA_0338 mdh; putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SCA_1426 citG; fumarate hydratase, class-II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D SCA_0766 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D SCA_0767 sdhB; succinate dehydrogenase iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D SCA_0765 sdhC; succinate dehydrogenase cytochrome b-558 K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D SCA_0883 sucD; putative succinyl-CoA synthetase, alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D SCA_0882 sucC; putative succinyl-CoA synthetase, beta chain K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_0932 putative pyruvate flavodoxin/ferredoxin oxidoreductase K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D SCA_0933 putative 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D SCA_1300 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SCA_0991 citB; aconitate hydratase (aconitase) K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SCA_1305 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SCA_1151 accB; putative acetyl-CoA carboxylase biotin carboxyl carrier subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCA_2040 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCA_2039 putative acetyl-CoA carboxylase (biotin carboxylase subunit), accC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCA_1150 accC; biotin carboxylase (subunit of acetyl-CoA carboxylase) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCA_1306 accD; acetyl-CoA carboxylase transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SCA_1337 fhs; formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SCA_0685 folD; putative bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SCA_0242 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCA_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SCA_1338 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_2259 acsA; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:sca00680]
D SCA_1475 putative D-isomer specific 2-hydroxyacid dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D SCA_2135 fdh; putative NAD-dependent formate dehydrogenase K00122 FDH; formate dehydrogenase [EC:1.17.1.9]
D SCA_1802 putative formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D SCA_1616 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SCA_0428 eno; 2-phospho-D-glycerate hydrolase (enolase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCA_0338 mdh; putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SCA_2144 fda; fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SCA_1628 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SCA_2412 conserved protein, similar to fructose-1,6-bisphosphatase, class II, fbp-1 K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D SCA_1964 fbp; putative fructose-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D SCA_1304 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCA_0225 putative sugar phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D SCA_0710 putative hexose phosphate isomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27]
D SCA_0711 putative hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D SCA_0226 putative hexulose-6-phosphate synthase K08093 hxlA; 3-hexulose-6-phosphate synthase [EC:4.1.2.43]
D SCA_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SCA_0242 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCA_1338 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_2259 acsA; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_1912 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_0032 gpm3; putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_1698 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_0427 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SCA_1330 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:sca00910]
D SCA_2142 fmdA; putative formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D SCA_1894 narG; respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SCA_1893 narH; nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SCA_1891 narI; NarI protein K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SCA_1897 nirB; NirB K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D SCA_1896 nirD; NirD protein K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D SCA_0524 putative FMN-dependent dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D SCA_0566 gudB; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D SCA_0957 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_2364 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_0105 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SCA_0106 gltD; NADH-glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SCA_2252 arcC; Conserved hypothetical protein; Sca_2252 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SCA_2049 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SCA_2256 arcC; Conserved hypothetical protein; Sca_2256 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SCA_1457 conserved hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:sca00920]
D SCA_0063 cysD; putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D SCA_0064 cysC; putative adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SCA_1309 conserved hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SCA_0058 cysH; putative phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D SCA_0059 cysJ; putative sulfite reductase (NADPH) flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D SCA_0060 cysI; putative sulfite reductase (NADPH) hemoprotein beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D SCA_0351 putative membrane protein K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D SCA_0185 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SCA_0164 cysK; cysteine synthase (O-acetylserine sulfhydrylase) K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SCA_1004 metA; putative homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SCA_0087 metC; putative Cys/Met metabolism pyridoxal-5'-phosphate dependent enzyme K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:sca00061]
D SCA_1305 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SCA_1151 accB; putative acetyl-CoA carboxylase biotin carboxyl carrier subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCA_2040 putative biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SCA_2039 putative acetyl-CoA carboxylase (biotin carboxylase subunit), accC K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCA_1150 accC; biotin carboxylase (subunit of acetyl-CoA carboxylase) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SCA_1306 accD; acetyl-CoA carboxylase transferase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SCA_0855 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D SCA_0853 fabD; putative malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SCA_0584 FabH; putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SCA_0585 fab; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SCA_0854 fabG; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_2279 fabG5; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_0921 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_2287 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_1602 fabZ; putative hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SCA_0612 fabI; putative trans-2-enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SCA_2407 fadE; putative acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SCA_2089 vraA; putative Co-A ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:sca00071]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2410 fadA; putative acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SCA_2409 putative fatty oxidation complex protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SCA_2408 putative glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SCA_2407 fadE; putative acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SCA_2089 vraA; putative Co-A ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SCA_2269 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:sca00561]
D SCA_0390 putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SCA_2272 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2415 dihydroxyacetone kinase family protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D SCA_2113 putative dihydroxyacetone kinase K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D SCA_2414 conserved hypothetical protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D SCA_2112 conserved hypothetical protein K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D SCA_2111 conserved hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SCA_0949 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SCA_0852 plsX; putative fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SCA_0994 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SCA_1333 conserved hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SCA_1470 conserved hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SCA_0132 geh''; truncated lipase (fragment 2) K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D SCA_2396 lip; triacylglycerol lipase precursor K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D SCA_0131 geh'; truncated lipase (fragment 1) K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D SCA_0619 putative glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D SCA_0366 putative membrane-bound sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:sca00564]
D SCA_1106 gpsA; putative glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SCA_0950 glpD; aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D SCA_0994 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SCA_1333 conserved hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SCA_0290 tagD; teichoic acid biosynthesis protein D K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D SCA_2108 tagD; putative teichoic acid biosynthesis protein D K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D SCA_1470 conserved hypothetical protein K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SCA_1370 putative lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5]
D SCA_1327 putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SCA_0746 putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SCA_0944 glpQ; putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SCA_0907 ugpQ'; truncated glycerophosphoryldiester phosphodiesterase (fragment 1) K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SCA_0521 glpQ; putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SCA_0908 ugpQ''; truncated glycerophosphoryldiester phosphodiesterase (fragment 2) K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SCA_0896 cdsA; putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SCA_0924 pgsA; putative phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SCA_1589 putative cardiolipin synthetase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SCA_0960 truncated putative cardiolipin synthetase (fragment 1) K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SCA_0961 truncated putative cardiolipin synthetase (fragment 2) K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D SCA_1479 pcrB; putative PcrB family protein K07094 pcrB; heptaprenylglyceryl phosphate synthase [EC:2.5.1.-]
D SCA_0411 putative acetyltransferase K24872 yvoF; heptaprenylglycerol acetyltransferase [EC:2.3.1.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
D SCA_1965 lacH; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:sca00592]
D SCA_2410 fadA; putative acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:sca00230]
D SCA_1125 nudF; putative ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SCA_2011 drm; putative phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SCA_0664 putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCA_0150 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SCA_0692 purF; putative amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SCA_0696 purD; putative phosphoribosylamine--glycine ligase PurD K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SCA_0694 purN; putative phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SCA_0691 purL; putative phosphoribosylformylglycinamidine synthetase II PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D SCA_0689 purS; putative phosphoribosylformylglycinamidine synthase, PurS component K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D SCA_0690 purQ; phosphoribosylformylglycinamidine synthase I PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SCA_0693 purM; phosphoribosylformylglycinamidine cyclo-ligase PurM K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SCA_0687 purK; putative phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SCA_0686 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SCA_0688 purC; putative phosphoribosylaminoimidazole-succinocarboxamide synthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SCA_1482 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SCA_0695 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SCA_1246 apt; adenine phosphoribosyl transferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SCA_1641 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SCA_0800 conserved hypothetical protein with nucleic acid binding motif K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SCA_0161 hpt; putative hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SCA_0049 guaB; putative inositol-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SCA_1101 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SCA_0771 HAM1 family protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SCA_0047 xprT; putative xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D SCA_0050 guaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SCA_0978 guaC; GMP reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D SCA_0826 gmk; putative guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SCA_0379 nrdE; ribonuceloside diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SCA_0380 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SCA_1845 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SCA_0221 putative deoxynucleoside kinase K15518 dgk; deoxyguanosine kinase [EC:2.7.1.113]
D SCA_1245 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SCA_1944 ppx; putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D SCA_0607 conserved hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SCA_1954 conserved hypothetical protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SCA_2459 purA; Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SCA_0220 putative deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D SCA_0931 putative metallo-phosphoesterase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SCA_1714 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SCA_0064 cysC; putative adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D SCA_0063 cysD; putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D SCA_2059 allB; putative allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D SCA_2060 hypothetical protein K01466 allB; allantoinase [EC:3.5.2.5]
D SCA_2056 putative allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D SCA_2055 conserved hypothetical protein K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D SCA_1782 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D SCA_1781 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D SCA_1780 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D SCA_2053 allD; putative ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D SCA_2054 allD; putative ureidoglycolate dehydrogenase K00073 allD; ureidoglycolate dehydrogenase (NAD+) [EC:1.1.1.350]
D SCA_2252 arcC; Conserved hypothetical protein; Sca_2252 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SCA_2049 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SCA_2256 arcC; Conserved hypothetical protein; Sca_2256 K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:sca00240]
D SCA_0817 pyrAB; carbamoyl-phosphate synthase, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SCA_0816 pyrAA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SCA_0814 pyrB; putative aspartate transcarbamoylase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SCA_0815 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SCA_0819 pyrD; dihydroorotate dehydrogenase, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D SCA_0818 pyrK; putative dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D SCA_0821 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SCA_0820 pyrF; putative orotidine-5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SCA_0893 pyrH; putative uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SCA_1101 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SCA_1630 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SCA_1109 cmk; putative cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SCA_1223 udk; putative uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SCA_1615 upp; uracil phosphoribosyl transferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SCA_0812 pyrR; putative pyrimidine operon regulatory protein / uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SCA_0931 putative metallo-phosphoesterase family protein K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D SCA_2012 pdp; putative pyrimidine nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SCA_1190 cdd; putative cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SCA_1845 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SCA_0379 nrdE; ribonuceloside diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SCA_0380 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SCA_0220 putative deoxynucleoside kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D SCA_1211 putative deaminase similar to ComEB K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SCA_0123 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SCA_0486 dut; putative dUTP pyrophosphatase, phage associated K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SCA_1622 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SCA_1071 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SCA_2063 amaB; putative N-carbamoyl-beta-alanine amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:sca00250]
D SCA_1402 nadB; putative L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SCA_1110 putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SCA_1544 conserved hypothetical protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D SCA_1314 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SCA_0569 argG; putative argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SCA_0568 argH; putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SCA_2459 purA; Adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SCA_1482 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SCA_0814 pyrB; putative aspartate transcarbamoylase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SCA_0283 putative aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SCA_2374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SCA_2363 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SCA_0105 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SCA_0106 gltD; NADH-glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SCA_0566 gudB; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D SCA_0564 rocA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D SCA_0957 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_2364 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_0817 pyrAB; carbamoyl-phosphate synthase, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SCA_0816 pyrAA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SCA_0690 purQ; phosphoribosylformylglycinamidine synthase I PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SCA_1657 glmS; putative glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SCA_0692 purF; putative amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:sca00260]
D SCA_1037 lysC; putative aspartokinase II K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SCA_0969 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SCA_1038 asd; putative aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SCA_0970 hom; putative homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SCA_0972 thrB; putative homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SCA_0971 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SCA_1514 ltaE; putative L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D SCA_1616 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SCA_0390 putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SCA_2272 Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SCA_1912 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_0032 gpm3; putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_1698 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_0427 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D SCA_1330 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SCA_0209 kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SCA_1160 gcvPA; putative glycine cleavage system P-protein subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D SCA_1158 gcvPB''; truncated glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (fragment 2) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SCA_1159 gcvPB'; truncated glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (fragment 1) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SCA_1161 gcvT; putative aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_0452 gcdH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D SCA_2162 cudB; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D SCA_2163 cudA; glycine betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D SCA_0087 metC; putative Cys/Met metabolism pyridoxal-5'-phosphate dependent enzyme K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D SCA_1979 putative L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SCA_1980 putative L-serine dehydratase beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SCA_0848 sdaB; putative L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SCA_0849 sdaA; putative L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SCA_1567 ilvA; thereonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SCA_1018 trpA; putative tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SCA_1017 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:sca00270]
D SCA_0185 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SCA_0164 cysK; cysteine synthase (O-acetylserine sulfhydrylase) K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SCA_0087 metC; putative Cys/Met metabolism pyridoxal-5'-phosphate dependent enzyme K17217 mccB; cystathionine gamma-lyase / homocysteine desulfhydrase [EC:4.4.1.1 4.4.1.2]
D SCA_0014 metC; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SCA_0086 cysM; Pyridoxal-5'-phosphate-dependent enzyme, beta family K17216 mccA; cystathionine beta-synthase (O-acetyl-L-serine) [EC:2.5.1.134]
D SCA_0013 metH; putative homocysteine methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SCA_0012 metE; 5-methyltetrahydropteroyltriglutamate-homocystei ne methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SCA_1389 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SCA_1221 mtn; putative 5'-methylthioadenosine nucleosidase / S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SCA_0800 conserved hypothetical protein with nucleic acid binding motif K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D SCA_0010 putative aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D SCA_1324 truncated GAF-domain protein (fragment 1) K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SCA_1399 conserved hypothetical protein K17462 yrrT; putative AdoMet-dependent methyltransferase [EC:2.1.1.-]
D SCA_1637 luxS; LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SCA_1037 lysC; putative aspartokinase II K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SCA_0969 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SCA_1038 asd; putative aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SCA_0970 hom; putative homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SCA_1004 metA; putative homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SCA_1003 cysD; putative O-acetylhomoserine (thiol)-lyase (homocysteine synthase) K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SCA_0215 ilvE; branched-chain amino acid aminotroansferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SCA_1369 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCA_0343 ldh; putative L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCA_0338 mdh; putative malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D SCA_1979 putative L-serine dehydratase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SCA_1980 putative L-serine dehydratase beta chain K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SCA_0848 sdaB; putative L-serine dehydratase, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SCA_0849 sdaA; putative L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D SCA_1330 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:sca00280]
D SCA_0215 ilvE; branched-chain amino acid aminotroansferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SCA_1139 bfmBAA; putative branched-chain alpha-keto acid dehydrogenase E1 component alpha chain K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SCA_1138 bfmBAB; branched-chain alpha-keto acid dehydrogenase E1 component beta chain K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SCA_1137 bmfBB; putative dihydrolipoamide branched chain transacylase (E2) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_2410 fadA; putative acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_1885 mvaS; putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:sca00290]
D SCA_1567 ilvA; thereonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SCA_1565 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SCA_1566 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SCA_1564 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SCA_1560 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SCA_1561 ilvH; putative acetolactate synthase small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SCA_1562 ilvC; alpha-keto-beta-hydroxylacil reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SCA_1559 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SCA_0215 ilvE; branched-chain amino acid aminotroansferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SCA_1563 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:sca00300]
D SCA_0970 hom; putative homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SCA_1037 lysC; putative aspartokinase II K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SCA_0969 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SCA_1038 asd; putative aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SCA_1039 dapA; putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SCA_1040 dapB; putative dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SCA_1358 pepV; putative Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCA_0033 dapE; putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCA_2333 putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCA_2362 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCA_1044 lysA; putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SCA_1041 dapD; putative tetrahydrodipicolinate acetyltransferase K05822 dapH; tetrahydrodipicolinate N-acetyltransferase [EC:2.3.1.89]
D SCA_0656 putative aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SCA_1582 murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SCA_2284 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:sca00310]
D SCA_1057 odhB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_2408 putative glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SCA_2363 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SCA_1357 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:sca00220]
D SCA_0022 argF; putative ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SCA_2257 argF; (Q9K3A1) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase),InterPro: Ornithine carbamoyltransferase; Conserved hypothetical protein; Sca_2257 K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SCA_2251 argF; putative ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SCA_0569 argG; putative argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SCA_0568 argH; putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SCA_1782 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D SCA_1781 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D SCA_1780 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D SCA_2085 arcA; putative arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D SCA_2086 arcA; putative arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D SCA_1487 nos; nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D SCA_0690 purQ; phosphoribosylformylglycinamidine synthase I PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SCA_0957 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_2364 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_0817 pyrAB; carbamoyl-phosphate synthase, large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SCA_0816 pyrAA; carbamoyl-phosphate synthase, small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SCA_2252 arcC; Conserved hypothetical protein; Sca_2252 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SCA_2049 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SCA_2256 arcC; Conserved hypothetical protein; Sca_2256 K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SCA_0566 gudB; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
C 00330 Arginine and proline metabolism [PATH:sca00330]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_1487 nos; nitric oxide synthase oxygenase K00491 nos; nitric-oxide synthase, bacterial [EC:1.14.14.47]
D SCA_0565 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D SCA_1128 putative pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SCA_1371 conserved hypothetical protein K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D SCA_0564 rocA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D SCA_1357 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
C 00340 Histidine metabolism [PATH:sca00340]
D SCA_0636 hisG; putative ATP phosphoribosyltransferase HisG K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SCA_0629 hisIE; putative histidine biosynthesis bifunctional protein HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D SCA_0631 hisA; putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SCA_0632 hisH; putative amidotransferase HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SCA_0630 hisF; putative imidazoleglycerol-phosphate synthase hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SCA_0633 hisB; putative imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D SCA_0371 hisC; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_0634 hisC; putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_0635 hisD; putative histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D SCA_2466 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D SCA_1828 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D SCA_1827 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D SCA_1831 formiminoglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:sca00350]
D SCA_0371 hisC; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_0634 hisC; putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_2446 conserved hypothetical protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D SCA_2269 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SCA_2374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SCA_2363 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:sca00360]
D SCA_2446 conserved hypothetical protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D SCA_0371 hisC; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_0634 hisC; putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_1357 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SCA_0040 putative 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00380 Tryptophan metabolism [PATH:sca00380]
D SCA_1057 odhB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_2408 putative glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2446 conserved hypothetical protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2210 katE_B; putative catalase K03781 katE; catalase [EC:1.11.1.6]
D SCA_2336 katA; (Q9ZN99) Catalase (EC 1.11.1.6),InterPro: Catalase; Conserved hypothetical protein; Sca_2336 K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:sca00400]
D SCA_1344 aroA; phospho-2-dehydro-3-deoxyheptonate aldolase / chorismate mutase K13853 aroG; 3-deoxy-7-phosphoheptulonate synthase / chorismate mutase [EC:2.5.1.54 5.4.99.5]
D SCA_1099 aroB; putative 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SCA_0448 aroD; putative 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D SCA_1218 aroE; putative shikimate 5-dehydrogenease K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SCA_1162 aroK; putative shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SCA_1098 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SCA_1100 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SCA_1012 trpE; putative anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SCA_1013 trpG; putative anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SCA_1014 trpD; putative anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SCA_1016 trpF; putative phosphoriborylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SCA_1015 trpC; putative indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SCA_1018 trpA; putative tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SCA_1017 trpB; tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SCA_1254 conserved hypothetical protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D SCA_1010 tyrA; putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SCA_1488 conserved hypothetical protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D SCA_0371 hisC; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_0634 hisC; putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:sca00410]
D SCA_2074 panD; putative aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SCA_0283 putative aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2073 panC; putative pantoate beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SCA_2063 amaB; putative N-carbamoyl-beta-alanine amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:sca00430]
D SCA_1314 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D SCA_0566 gudB; NAD-specific glutamate dehydrogenase K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D SCA_0242 pta; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SCA_1316 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:sca00440]
D SCA_0879 putative hydrolase (HAD superfamily) K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D SCA_0878 putative aminotransferase, class V K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:sca00450]
D SCA_0014 metC; putative cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SCA_0013 metH; putative homocysteine methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SCA_0012 metE; 5-methyltetrahydropteroyltriglutamate-homocystei ne methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SCA_0460 csdB; putative selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SCA_0413 trxB; putative thioredoxine reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SCA_0063 cysD; putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D SCA_0140 metS; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:sca00460]
D SCA_2342 putative glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SCA_2341 truncated putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SCA_1110 putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SCA_1616 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SCA_2142 fmdA; putative formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:sca00470]
D SCA_1043 alr; putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SCA_1576 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SCA_1357 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SCA_1583 ddlA; putative D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SCA_0534 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SCA_0536 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SCA_0690 purQ; phosphoribosylformylglycinamidine synthase I PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D SCA_0770 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SCA_0796 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SCA_1044 lysA; putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SCA_1681 conserved hypothetical protein K21898 orr; ornithine racemase [EC:5.1.1.12]
C 00480 Glutathione metabolism [PATH:sca00480]
D SCA_2038 conserved hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D SCA_0547 cytosol aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SCA_1300 icd; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SCA_1132 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D SCA_1130 zwf; putative glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SCA_0954 putative glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:sca00511]
D SCA_1965 lacH; beta-D-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D SCA_0659 bph; bifunctional peptidoglycan hydrolase precursor K13714 atl; bifunctional autolysin [EC:3.5.1.28 3.2.1.96]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:sca00542]
D SCA_0395 llm; putative phospho-N-acetylmuramyl-pentapeptide-transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:sca00541]
D SCA_2025 gtaB; UTP-glucose-1-phosphate uridyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2180 truncated UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2179 truncated UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SCA_2065 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_1770 galE; UDP-glucose-4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_2099 hypothetical protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_2158 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SCA_2349 capI; capsular polysaccharide biosynthesis protein Cap I K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D SCA_2439 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SCA_1648 putative mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SCA_0149 gcaD; putative UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SCA_1614 mnaA; UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SCA_2026 capD; putative capsular polysaccharide synthesis enzyme K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D SCA_2353 capD''; truncated capsular polysaccharide synthesis enzyme CapD (fragment 2) K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D SCA_2348 capL; capsular polysaccharide biosynthesis protein CapL K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:sca00550]
D SCA_1627 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SCA_1603 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SCA_0386 murB; putative UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SCA_1347 murC; UDP-N-Aacerylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SCA_0796 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SCA_1583 ddlA; putative D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SCA_1582 murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SCA_2284 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SCA_1191 dgk; putative diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D SCA_0895 uppS; putative undecaprenyl pyrophosphatase synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SCA_0330 bacA; putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SCA_1061 putative membrane integrated acid phosphatase family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SCA_0795 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SCA_1062 murG; putative undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SCA_1084 pbp2; penicillin-binding protein 2 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SCA_0291 pbp4; penicillin binding protein 4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SCA_2445 pbp4; penicillin binding protein 4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SCA_1643 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SCA_0621 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SCA_1465 conserved hypothetical protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SCA_1464 conserved hypothetical protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SCA_1750 fmhB; putative FmhB protein K11693 femX; peptidoglycan pentaglycine glycine transferase (the first glycine) [EC:2.3.2.16]
D SCA_1019 femA; factor essential for expression of methicillin resistance, FemA K11694 femA; peptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.17]
D SCA_1020 femB; factor essential for expression of methicillin resistance, FemB K11695 femB; peptidoglycan pentaglycine glycine transferase (the fourth and fifth glycine) [EC:2.3.2.18]
D SCA_1336 sgtA; putative transglycosylase K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SCA_1447 monofunctional glycosyltransferase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D SCA_0794 pbpA; penicillin-binding protein Pbp1 K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-]
D SCA_1173 pbpF; penicillin-binding protein Pbp2b K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-]
C 00552 Teichoic acid biosynthesis [PATH:sca00552]
D SCA_0330 bacA; putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SCA_1061 putative membrane integrated acid phosphatase family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SCA_0395 llm; putative phospho-N-acetylmuramyl-pentapeptide-transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SCA_0281 tagA; putative teichoic acid biosynthesis protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D SCA_0288 tagB; teichoic acid biosynthesis protein B K21285 tagB; teichoic acid glycerol-phosphate primase [EC:2.7.8.44]
D SCA_2150 putative teichoic acid biosynthesis protein F K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D SCA_2178 truncated putative teichoic acid biosythesis protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D SCA_2181 hypothetical protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D SCA_2184 truncated protein similar to glycosyl/glycerophosphate transferases (fragment 2) K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D SCA_2107 tagF2; putative teichoic acid biosynthesis protein K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D SCA_2109 tagF; putative teichoic acid biosynthesis protein F K09809 tagF; CDP-glycerol glycerophosphotransferase [EC:2.7.8.12]
D SCA_2110 tagE; putative teichoic acid biosynthesis protein E K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D SCA_0534 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SCA_0536 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SCA_0535 dltB; DltB membrane protein K03739 dltB; membrane protein involved in D-alanine export
D SCA_0537 dltD; poly D-alanine transfer protein K03740 dltD; D-alanine transfer protein
D SCA_0663 putative membrane anchored protein with LytR_cpsA_psr domain K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SCA_1805 conserved hypothetical protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SCA_1006 putative cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SCA_2404 hypothetical protein K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
D SCA_0056 putative glycosyl transferase K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]
D SCA_0619 putative glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D SCA_0366 putative membrane-bound sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D SCA_2101 hypothetical protein K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D SCA_0869 putative membrane protein K25619 yfhO; lipoteichoic acid glycosylation protein
D SCA_2026 capD; putative capsular polysaccharide synthesis enzyme K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D SCA_2353 capD''; truncated capsular polysaccharide synthesis enzyme CapD (fragment 2) K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:sca00543]
D SCA_0395 llm; putative phospho-N-acetylmuramyl-pentapeptide-transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SCA_0185 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:sca00730]
D SCA_0594 thiC'; truncated thiamin biosynthesis protein ThiC (fragment 1) K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SCA_0595 thiC''; truncated thiamine biosynthesis protein ThiC (fragment 2) K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D SCA_1595 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D SCA_2080 putative molybdopterin biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D SCA_1234 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1322 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1401 nifS; putative Cysteine desulfurase/aminotransferase,class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1320 thiI''; truncated putative thiamine biosynthesis ATP pyrophosphatase (fragment 2) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SCA_1321 thiI'; truncated putative thiamine biosynthesis ATP pyrophosphatase (fragment 1) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SCA_2077 goxB; putative glycine oxidase K03153 thiO; glycine oxidase [EC:1.4.3.19]
D SCA_2079 thiG; putative thiazole biosynthesis protein ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D SCA_2076 hypothetical protein K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D SCA_1594 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SCA_1593 thiE; thiamin phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D SCA_0841 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SCA_0843 putative thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SCA_1714 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SCA_2227 putative transcriptional activator TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SCA_1596 tenA; putative transcriptional activator tenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SCA_1946 argE; putative acetylornitine deacetylase K20895 ylmB; formylaminopyrimidine deformylase [EC:3.5.1.-]
C 00740 Riboflavin metabolism [PATH:sca00740]
D SCA_1373 ribA; riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SCA_1375 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SCA_0579 Predicted hydrolases of the HAD superfamily K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SCA_1372 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D SCA_1374 ribB; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D SCA_0912 ribC; putative riboflavin kinase / FAD synthase RibC K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SCA_0041 nitroreductase family protein K19285 nfrA1; FMN reductase (NADPH) [EC:1.5.1.38]
D SCA_1594 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D SCA_1125 nudF; putative ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:sca00750]
D SCA_0232 thiD; putative phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SCA_0971 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SCA_0173 pdx1; putative Vitamin B6 biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D SCA_0174 SNO glutamine amidotransferase family protein K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:sca00760]
D SCA_1402 nadB; putative L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D SCA_1404 nadA; quinolinate synthetase complex, subunit A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D SCA_1403 nadC; nicotinate-nucleotide pyrophosphorylase homolog,carboxylating K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D SCA_1486 conserved hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SCA_1641 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SCA_1216 nad; putative nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SCA_1485 nadE; NAD synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SCA_2434 conserved hypothetical protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D SCA_0608 putative kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SCA_2374 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SCA_2363 gabD; succinate-semialdehyde dehydrogenase (NADP+) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:sca00770]
D SCA_1560 ilvB; acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SCA_1561 ilvH; putative acetolactate synthase small (regulatory) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SCA_1562 ilvC; alpha-keto-beta-hydroxylacil reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SCA_1559 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SCA_2072 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D SCA_2370 hypothetical protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SCA_2104 apbA; putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SCA_2071 putative 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D SCA_2073 panC; putative pantoate beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D SCA_1634 conserved hypothetical protein K09680 PANK1_2_3; type II pantothenate kinase [EC:2.7.1.33]
D SCA_0829 coaBC; putative Coenzyme A biosynthesis bifunctional protein coaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D SCA_0750 coaD; putative phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SCA_1295 coaE; putative dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SCA_1577 acpS; holo-[acyl-carrier protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SCA_0215 ilvE; branched-chain amino acid aminotroansferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SCA_2063 amaB; putative N-carbamoyl-beta-alanine amidohydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D SCA_2074 panD; putative aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:sca00780]
D SCA_0585 fab; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SCA_0854 fabG; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_2279 fabG5; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_0921 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_2287 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_1602 fabZ; putative hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SCA_0612 fabI; putative trans-2-enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SCA_2223 bioA; putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SCA_2224 bioD; putative dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D SCA_2002 bioB; putative biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D SCA_1090 birA; putative bifunctional protein [includes: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:sca00785]
D SCA_1156 putative biotin/lipoate A/B protein ligase family protein K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D SCA_0528 lipA; putative lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D SCA_0243 lplA; putative lipoate protein ligase K16869 lipL; octanoyl-[GcvH]:protein N-octanoyltransferase [EC:2.3.1.204]
D SCA_0644 putative lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_0719 pdhA; pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SCA_0720 pdhB; pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SCA_0721 pdhC; dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SCA_1058 odhA; putatative 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D SCA_1057 odhB; dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D SCA_1139 bfmBAA; putative branched-chain alpha-keto acid dehydrogenase E1 component alpha chain K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D SCA_1138 bfmBAB; branched-chain alpha-keto acid dehydrogenase E1 component beta chain K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D SCA_1137 bmfBB; putative dihydrolipoamide branched chain transacylase (E2) K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D SCA_1160 gcvPA; putative glycine cleavage system P-protein subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D SCA_1158 gcvPB''; truncated glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (fragment 2) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SCA_1159 gcvPB'; truncated glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (fragment 1) K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D SCA_1161 gcvT; putative aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SCA_0452 gcdH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:sca00790]
D SCA_0230 conserved hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D SCA_0166 folB; 7,8-dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SCA_0167 folK; 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokin a se K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SCA_0165 folP; dihydropteroate synthase chain A synthetase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SCA_1070 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SCA_1268 folC'; truncated putative folylpolyglutamate synthase (fragment 1) K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SCA_1267 folC''; truncated putative folylpolyglutamate synthase (fragment 2) K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SCA_1373 ribA; riboflavin biosynthesis protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D SCA_0361 glutamine amidotransferase class-I protein K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D SCA_0362 putative chorismate binding protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D SCA_0363 putative 4-amino-4-deoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D SCA_0359 putative 6-pyruvoyltetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SCA_0358 putative organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SCA_0360 putative ExsB family protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SCA_0376 putative GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SCA_1756 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SCA_1763 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SCA_1759 moaE; MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SCA_1764 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SCA_1761 moeA; molybdopterin biosynthesis protein MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D SCA_1757 mobA; MobA; Molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:sca00670]
D SCA_1070 dfrA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SCA_1337 fhs; formate-tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SCA_0685 folD; putative bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SCA_1616 glyA; serine hydroxymethyl transferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SCA_0694 purN; putative phosphoribosylglycinamide formyltransferase PurN K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SCA_0695 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SCA_0836 putative methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SCA_1161 gcvT; putative aminomethyltransferase (glycine cleavage system T protein) K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D SCA_0013 metH; putative homocysteine methyltransferase K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SCA_1071 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SCA_1172 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:sca00860]
D SCA_1278 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D SCA_1273 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SCA_1437 gsaB; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SCA_1274 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SCA_1276 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D SCA_1275 hemD; putative uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D SCA_1408 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D SCA_1406 hemY; protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D SCA_1407 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D SCA_0241 conserved hypothetical protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5]
D SCA_0061 cysG; putative uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SCA_1895 sirB; SirB protein K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D SCA_1898 sirA; SirA K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D SCA_0742 ctaB; putative protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D SCA_0741 ctaA; putative heme A synthase CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SCA_0030 conserved hypothetical protein with monooxygenase domain K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48]
D SCA_1676 conserved hypothetical protein K07145 isdG; heme oxygenase (staphylobilin-producing) [EC:1.14.99.48]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:sca00130]
D SCA_1103 gerCB; menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D SCA_0651 menF; putative menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D SCA_0652 menD; putative menaquinone biosynthesis protein MenD K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D SCA_0653 putative hydrolase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D SCA_1394 conserved hypothetical protein K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D SCA_1395 menE; O-succinylbenzoic acid--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D SCA_0654 menB; dihydroxynaphtoic acid synthetase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D SCA_0549 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D SCA_0650 putative prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SCA_2425 conserved hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:sca00900]
D SCA_0145 GHMP kinase family protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_1885 mvaS; putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SCA_1883 mvaA; putative hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D SCA_0244 mvaK1; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D SCA_0246 mvaK2; phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D SCA_0245 mvaD; mevalonate diphosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D SCA_1847 fni; putative isopentenyl diphosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D SCA_1145 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SCA_1104 hypothetical protein K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D SCA_1102 gerCC; putative heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D SCA_0895 uppS; putative undecaprenyl pyrophosphatase synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:sca00906]
D SCA_2274 similar to squalene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D SCA_1490 aldH; putative aldehyde dehydrogenase K25072 crtNc; 4,4'-diapolycopenoate synthase [EC:1.2.99.10]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:sca00907]
D SCA_2410 fadA; putative acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SCA_0983 tkt; putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D SCA_0651 menF; putative menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:sca00946]
D SCA_2342 putative glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SCA_2341 truncated putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D SCA_0210 Choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:sca00261]
D SCA_0063 cysD; putative sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D SCA_1037 lysC; putative aspartokinase II K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SCA_0969 putative aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SCA_1038 asd; putative aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SCA_1039 dapA; putative dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SCA_1040 dapB; putative dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:sca00521]
D SCA_1169 glcA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D SCA_0664 putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SCA_0733 putative inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SCA_1806 conserved hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SCA_1169 glcA; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:sca00401]
D SCA_1010 tyrA; putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SCA_0371 hisC; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_0634 hisC; putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SCA_1012 trpE; putative anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SCA_1013 trpG; putative anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SCA_0853 fabD; putative malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SCA_0854 fabG; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_2279 fabG5; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_0921 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_2287 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_0612 fabI; putative trans-2-enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SCA_0855 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:sca00999]
D SCA_1389 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SCA_1218 aroE; putative shikimate 5-dehydrogenease K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D SCA_2342 putative glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D SCA_2341 truncated putative beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:sca00997]
D SCA_1681 conserved hypothetical protein K21898 orr; ornithine racemase [EC:5.1.1.12]
D SCA_1684 conserved hypothetical protein K23446 sfnaD; D-ornithine---citrate ligase [EC:6.3.2.58]
D SCA_1682 conserved hypothetical protein K23447 sfnaB; staphyloferrin A synthase [EC:6.3.2.57]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:sca00362]
D SCA_2410 fadA; putative acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D SCA_0051 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_0807 truncated glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 1) K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_0808 truncated glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 2) K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_0040 putative 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D SCA_1007 putative keto-enol isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D SCA_2409 putative fatty oxidation complex protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D SCA_2408 putative glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D SCA_1047 putative acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:sca00625]
D SCA_2269 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
D SCA_1625 putative aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2103 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2102 aldA; putative aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D SCA_2091 putative 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:sca00361]
D SCA_0051 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_0807 truncated glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 1) K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_0808 truncated glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 2) K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_2091 putative 2-haloalkanoic acid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:sca00622]
D SCA_0051 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_0807 truncated glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 1) K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_0808 truncated glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 2) K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_1007 putative keto-enol isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D SCA_0040 putative 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D SCA_2410 fadA; putative acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:sca00643]
D SCA_0051 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_0807 truncated glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 1) K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_0808 truncated glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein (fragment 2) K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D SCA_2406 fadX; putative acetyl-CoA transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
D SCA_1782 ureC; urease alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D SCA_1781 ureB; urease beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D SCA_1780 ureA; urease gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation [PATH:sca00621]
D SCA_1007 putative keto-enol isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D SCA_0040 putative 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
C 00626 Naphthalene degradation [PATH:sca00626]
D SCA_2269 hypothetical protein K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:sca03020]
D SCA_0199 rpoB; RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SCA_0200 rpoC; RNA polymerase beta-prime chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SCA_1709 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SCA_0827 putative DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SCA_1631 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:sca03010]
D SCA_1108 putative 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SCA_0891 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SCA_1729 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SCA_1326 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SCA_1718 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SCA_0026 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SCA_0205 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SCA_1721 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SCA_1702 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SCA_1736 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SCA_1710 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SCA_0204 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SCA_1711 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SCA_0977 rpsN; putative 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SCA_1722 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SCA_0913 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SCA_0863 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SCA_1726 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SCA_0028 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SCA_1731 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SCA_1207 rpsT; putative 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SCA_1197 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SCA_0194 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SCA_1732 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SCA_1735 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SCA_1734 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SCA_1723 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SCA_1720 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SCA_0196 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SCA_2461 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SCA_0195 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SCA_0193 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SCA_1703 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SCA_1725 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SCA_1716 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SCA_1728 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SCA_1708 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SCA_1719 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SCA_0866 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SCA_1284 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SCA_1258 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SCA_1730 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SCA_1733 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SCA_1724 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SCA_0151 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SCA_1256 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SCA_0845 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SCA_1727 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SCA_1717 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SCA_1623 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SCA_0754 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SCA_0976 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SCA_0001 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SCA_1285 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SCA_1712 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SCA_0203 putative ribosomal protein K07590 RP-L7A; large subunit ribosomal protein L7A
D SCA_16S_rRNA_D 16S_rRNA_D; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_E 16S_rRNA_E; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_A 16S_rRNA_A; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_C 16S_rRNA_C; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_B 16S_rRNA_B; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_23S_rRNA_B 23S_rRNA_B; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_D 23S_rRNA_D; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_C 23S_rRNA_C; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_A 23S_rRNA_A; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_E 23S_rRNA_E; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_5S_rRNA_A 5S_rRNA_A; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_E 5S_rRNA_E; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_B2 5S_rRNA_B2; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_B 5S_rRNA_B; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_C 5S_rRNA_C; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:sca00970]
D SCA_t0009 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCA_t0037 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCA_t0046 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCA_t0013 tRNA-Arg_(TCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCA_t0007 tRNA-Arg_(ACG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCA_t0039 tRNA-Arg_(ACG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCA_t0010 tRNA-Arg_(CCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCA_t0012 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCA_t0016 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCA_t0055 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCA_t0020 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCA_t0032 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCA_t0059 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCA_t0025 tRNA-Cys_(GCA); tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SCA_t0026 tRNA-Gln_(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCA_t0051 tRNA-Gln_(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCA_t0060 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SCA_t0015 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SCA_t0054 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SCA_t0017 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0048 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0005 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0041 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0023 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0024 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0018 tRNA-His_(GTG); tRNA-His K14226 tRNA-His; tRNA His
D SCA_t0027 tRNA-His_(GTG); tRNA-His K14226 tRNA-His; tRNA His
D SCA_t0047 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SCA_t0056 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SCA_t0049 tRNA-Leu_(GAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0006 tRNA-Leu_(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0040 tRNA-Leu_(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0022 tRNA-Leu_(CAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0042 tRNA-Leu_(TAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0043 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCA_t0004 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCA_t0050 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCA_t0021 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D SCA_t0033 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D SCA_t0035 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D SCA_t0036 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D SCA_t0019 tRNA-Phe_(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SCA_t0031 tRNA-Phe_(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SCA_t0038 tRNA-Pro_(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SCA_t0008 tRNA-Pro_(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SCA_t0011 tRNA-Ser_(GCT); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0001 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0034 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0057 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0014 tRNA-Ser_(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0058 tRNA-Ser_(CGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0003 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCA_t0030 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCA_t0044 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCA_t0028 tRNA-Trp_(CCA); tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SCA_t0029 tRNA-Tyr_(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SCA_t0052 tRNA-Tyr_(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SCA_t0002 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D SCA_t0045 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D SCA_t0053 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D SCA_0184 gltX; putative glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SCA_1472 gatA; glutamyl-tRNAGln amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SCA_1471 gatB; glutamyl-tRNAGln amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SCA_1473 gatC; glutamyl-tRNAGln amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SCA_1230 alaS; putative alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SCA_1241 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCA_1088 asnS; putative asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SCA_1187 glyS; putative glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SCA_0282 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SCA_1289 thrS; threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SCA_2465 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SCA_0186 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SCA_0140 metS; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SCA_0836 putative methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SCA_1269 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SCA_1364 leuS''; truncated leucyl-tRNA synthetase (fragment 2) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCA_1365 leuS'; truncated leucyl-tRNA synthetase (fragment 1) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCA_0806 ileS; putative isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SCA_0169 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SCA_0259 argS; putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SCA_0898 proS; putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SCA_1242 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SCA_0756 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SCA_0757 pheT; putative phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SCA_1335 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SCA_0596 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:sca03060]
D SCA_2201 putative preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SCA_1715 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D SCA_0191 secE; (P36253) Preprotein translocase secE subunit,InterPro: Protein secE/sec61-gamma protein; Hypothetical protein; Sca_0191 K03073 secE; preprotein translocase subunit SecE
D SCA_0430 secG; putative preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SCA_1248 secDF; putative protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D SCA_1249 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D SCA_1592 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCA_2248 putative lipoprotein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCA_2197 putative preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCA_0401 secA; preprotein translocase secA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCA_0860 ffh'; truncated signal recognition particle homolog (fragment 1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SCA_0861 ffh''; truncated signal recognition particle homolog (fragment 2) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SCA_0858 ftsY; putative cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SCA_2211A tatA; putative sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D SCA_2212 tatC; putative sec-independant protein translocase K03118 tatC; sec-independent protein translocase protein TatC
D SCA_0572 sipA; type-I signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SCA_0573 sipB; type-1 signal peptidase 1B K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SCA_0810 lsp; lipoprotein signal peptidase (signal peptidase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:sca04122]
D SCA_1234 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1322 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1401 nifS; putative Cysteine desulfurase/aminotransferase,class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1233 putative (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SCA_1759 moaE; MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D SCA_1756 moaA; Molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D SCA_1758 moaD; MoaD K03636 moaD; sulfur-carrier protein
D SCA_1765 moeB; putative molybdopterin biosynthesis protein moeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D SCA_1763 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D SCA_1764 moaB; Molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D SCA_1320 thiI''; truncated putative thiamine biosynthesis ATP pyrophosphatase (fragment 2) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SCA_1321 thiI'; truncated putative thiamine biosynthesis ATP pyrophosphatase (fragment 1) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SCA_2078 hypothetical protein K03154 thiS; sulfur carrier protein
D SCA_2080 putative molybdopterin biosynthesis protein MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:sca03018]
D SCA_0428 eno; 2-phospho-D-glycerate hydrolase (enolase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCA_0914 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SCA_0432 rnr; putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SCA_1581 putative helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SCA_0368 recQ; DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SCA_1113 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SCA_1624 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SCA_0927 putative exported protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SCA_0713 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SCA_0915 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SCA_1304 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCA_1202 dnaK; chaperone protein DnaK (Hsp70) K04043 dnaK; molecular chaperone DnaK
D SCA_1540 groEL; GroEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCA_0953 putative Hfq protein K03666 hfq; host factor-I protein
D SCA_1945 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:sca03030]
D SCA_1466 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCA_1308 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCA_0899 polC; homolog of DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SCA_0119 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCA_0125 holB; putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCA_1208 putative DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCA_2473 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCA_2460 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SCA_1184 dnaG; putative DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D SCA_0027 ssb; putative single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_1600 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_0475 ssb; putative single strand DNA binding protein,phage associated K03111 ssb; single-strand DNA-binding protein
D SCA_1075 conserved hypothetical protein with RNase H domain K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SCA_0881 rnhB; putative RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SCA_0758 rnhC; putative ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SCA_1297 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCA_1477 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:sca03410]
D SCA_1086 nth; putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SCA_0233 ung; putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SCA_1441 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SCA_1843 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SCA_1296 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SCA_2193 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SCA_1270 tag; putative DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SCA_1178 putative AP endonuclease family 2 protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SCA_1297 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCA_1247 putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SCA_1477 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:sca03420]
D SCA_0153 mfd; putative transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SCA_0408 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SCA_0407 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SCA_0764 uvrC; putative excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SCA_1478 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCA_2307 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCA_1297 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCA_1477 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:sca03430]
D SCA_0945 mutS; putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SCA_0762 mutS2; MutS2-like protein K07456 mutS2; DNA mismatch repair protein MutS2
D SCA_0946 mutL; putative DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D SCA_1478 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCA_2307 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCA_1147 putative exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SCA_1146 putative exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SCA_1247 putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SCA_0027 ssb; putative single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_1600 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_0475 ssb; putative single strand DNA binding protein,phage associated K03111 ssb; single-strand DNA-binding protein
D SCA_1308 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCA_0899 polC; homolog of DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SCA_2473 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCA_0119 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCA_1208 putative DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCA_0125 holB; putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCA_1466 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCA_1477 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:sca03440]
D SCA_1247 putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SCA_0027 ssb; putative single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_1600 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_0475 ssb; putative single strand DNA binding protein,phage associated K03111 ssb; single-strand DNA-binding protein
D SCA_2471 recF; DNA repair and genetic recombination protein K03629 recF; DNA replication and repair protein RecF
D SCA_1188 recO; putative recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D SCA_0121 recR; putative recombination protein K06187 recR; recombination protein RecR
D SCA_0926 recA; RecA protein (recombinase A) K03553 recA; recombination protein RecA
D SCA_1297 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCA_1253 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D SCA_1252 ruvB; holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SCA_0850 recG; putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SCA_1231 conserved hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SCA_1308 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCA_0899 polC; homolog of DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SCA_2473 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCA_0119 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCA_1208 putative DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCA_0125 holB; putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCA_1466 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCA_0830 priA; putative primosomal replication factor Y (primosomal protein N') K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:sca02010]
D SCA_1768 modA; molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D SCA_1767 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D SCA_1766 modC; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SCA_0876 hypothetical protein, similar to ABC transporter, binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SCA_2241 putative ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SCA_2240 putative ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SCA_0875 putative ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SCA_2242 putative ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SCA_0874 putative ABC transporter nucleotide-binding domain K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SCA_0728 potD; putative spermidine/putrescine-binding protein precursor PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SCA_0727 potC; putative spermidine/putrescine transport system permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D SCA_0726 potB; putative spermidine/putrescine transport system permease protein potB K11071 potB; spermidine/putrescine transport system permease protein
D SCA_0725 potA; putative spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SCA_0370 opuAC; putative substrate binding component of ABC-type glycine betaine transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D SCA_1932 opuCC; putative glycine betaine/carnitine/choline ABC transporter (osmoprotec) opuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D SCA_1931 opuCD; putative glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SCA_1933 opuCB; putative glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SCA_0369 opuBA; putative ATPase component of ABC-type proline/glycine betaine transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SCA_1934 opuCA; putative glycine betaine/carnitine/choline ABC transporter (ATP-bindin) opuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SCA_2420 rbsD; ribose permease K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D SCA_1034 putative phosphate transport system substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SCA_1033 putative ABC transporter permease protein K02037 pstC; phosphate transport system permease protein
D SCA_1032 pstA; putative phosphate ABC transporter permease protein K02038 pstA; phosphate transport system permease protein
D SCA_1031 pstB; putative phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SCA_1910 conserved hypothetical protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SCA_1909 hypothetical protein K10009 tcyB; L-cystine transport system permease protein
D SCA_1908 putative ABC transporter K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SCA_1432 conserved hypothetical protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D SCA_1431 glnQ; glutamate ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SCA_2189 hypothetical protein, similar to lactococcal lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_0342 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_0457 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_1512 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_1513 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_2190 putative ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SCA_0456 putative ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SCA_2191 putative ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SCA_0455 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SCA_0592 oppA; putative peptide binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SCA_0588 oppB; oligopeptide transport system permease protein homolog OppB K15581 oppB; oligopeptide transport system permease protein
D SCA_0589 oppC; putative oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D SCA_0590 oppD; oligopeptide transport system ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SCA_0591 oppF; oligopeptide transport system ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SCA_1680 fecB; putative ferrichrome ABC transporter (binding protein) K23181 fecB; ferric citrate transport system substrate-binding protein
D SCA_0870 putative ABC transporter siderophore binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D SCA_0964 similar to transport system binding proteins K23181 fecB; ferric citrate transport system substrate-binding protein
D SCA_1678 putative FecCD transport family protein K23182 fecD; ferric citrate transport system permease protein
D SCA_1679 putative FecCD transport family protein K23183 fecC; ferric citrate transport system permease protein
D SCA_0273 putative lipoprotein, AdhesinB family protein K19975 mntC; manganese transport system substrate-binding protein
D SCA_0274 putative ABC transporter, permease component K19976 mntB; manganese transport system permease protein
D SCA_0275 putative ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D SCA_1971 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D SCA_1176 mreB; putative ABC transporter permease protein MreB K09816 znuB; zinc transport system permease protein
D SCA_1177 mreA; putative ABC transporter, ATPase component MreA K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SCA_2225 bioY; putative biotin synthase K03523 bioY; biotin transport system substrate-specific component
D SCA_1775 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D SCA_1705 conserved hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D SCA_0698 putative cobalt transport system permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D SCA_1707 conserved hypothetical protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SCA_1706 conserved hypothetical protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SCA_0287 tagG; teichoic acid translocation permease protein K09692 tagG; teichoic acid transport system permease protein
D SCA_1443 conserved hypothetical protein K09692 tagG; teichoic acid transport system permease protein
D SCA_0286 tagH; teichoic acid translocation ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D SCA_1444 conserved hypothetical protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D SCA_1862 conserved hypothetical protein K09813 hrtB; hemin transport system permease protein
D SCA_1861 putative ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D SCA_0305 putative ABC transporter permease K19080 vraG; cationic antimicrobial peptide transport system permease protein
D SCA_0304 putative ABC transporter ATP-binding protein K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SCA_1974 ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SCA_1973 putative ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SCA_0292 ATP-binding cassette transporter A K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D SCA_0332 cydC; putative ABC transporter required for expression of cytochrome bd, CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SCA_0331 cydD; putative ABC transporter required for expression of cytochrome bd, CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SCA_0057 vba; ABC transporter ATP-binding protein (antibiotic resistance) K19349 vga; pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:sca02060]
D SCA_0705 ptsI; phosphoenolpyruvate-protein phosphatase (phosphotransferase system enzyme I) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SCA_0704 ptsH; phosphocarrier protein HPR K02784 ptsH; phosphocarrier protein HPr
D SCA_0999 glcA; glucose-specific phosphotransferase system enzyme II, factor IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SCA_1000 glcB; glucose-specific phosphotransferase system enzym II, factor IIB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SCA_1066 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCA_1332 putative PTS system IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SCA_2138 putative PTS system, IIBC components K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCA_2440 fruA; putative fructose phosphotransferase system enzyme fruA K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D SCA_1660 mtlF; PTS system, mannitol-specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCA_1658 mtlA; PTS system, mannitol-specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCA_0667 lacF; putative lactose-specific enzyme IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCA_0668 lacE; putative PTS system lactose-specific component IIBC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SCA_2322 putative sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SCA_2321 putative sorbitol PTS, EIIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D SCA_2320 putative sorbitol PTS, EIIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D SCA_1696 hypothetical protein K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SCA_0348 fruA; putative fructose specific permease K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCA_0347 fruB; putative fructose 1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:sca03070]
D SCA_1248 secDF; putative protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D SCA_0191 secE; (P36253) Preprotein translocase secE subunit,InterPro: Protein secE/sec61-gamma protein; Hypothetical protein; Sca_0191 K03073 secE; preprotein translocase subunit SecE
D SCA_0430 secG; putative preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SCA_2201 putative preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SCA_1715 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D SCA_1249 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D SCA_1592 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCA_2248 putative lipoprotein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCA_2197 putative preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCA_0401 secA; preprotein translocase secA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCA_0858 ftsY; putative cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SCA_0860 ffh'; truncated signal recognition particle homolog (fragment 1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SCA_0861 ffh''; truncated signal recognition particle homolog (fragment 2) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SCA_2211A tatA; putative sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D SCA_2212 tatC; putative sec-independant protein translocase K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:sca02020]
D SCA_1298 phoR; putative alkaline phosphatase synthesis sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SCA_1299 phoP; alkaline phosphatase synthesis transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SCA_1034 putative phosphate transport system substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SCA_1334 conserved hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SCA_0625 putative protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SCA_1117 srrB; staphylococcal respiratory response protein SrrB K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D SCA_1118 srrA; staphylococcal respiratory response regulator receiver SrrA K07775 resD; two-component system, OmpR family, response regulator ResD
D SCA_0741 ctaA; putative heme A synthase CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SCA_2455 two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SCA_2456 vicR; putative response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D SCA_2474 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D SCA_0353 saeS; histidine protein kinase SaeS K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D SCA_0352 saeR'; truncated response regulator saeR (fragment 1) K10682 saeR; two-component system, OmpR family, response regulator SaeR
D SCA_0305 putative ABC transporter permease K19080 vraG; cationic antimicrobial peptide transport system permease protein
D SCA_0304 putative ABC transporter ATP-binding protein K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SCA_0303 putative two-component sensor histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SCA_0302 putative response regulator protein K19078 graR; two-component system, OmpR family, response regulator protein GraR
D SCA_0534 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SCA_0535 dltB; DltB membrane protein K03739 dltB; membrane protein involved in D-alanine export
D SCA_0536 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SCA_0537 dltD; poly D-alanine transfer protein K03740 dltD; D-alanine transfer protein
D SCA_1002 fmtC; oxacillin resistance-related FmtC protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SCA_1643 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SCA_1059 putative sensor protein histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SCA_1060 putative response regulator protein K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SCA_0558 conserved hypothetical protein K06347 kapB; kinase-associated protein B
D SCA_1307 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D SCA_1923 lytS; two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SCA_1924 lytR; two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
D SCA_1925 lrgA; putative holin-like protein LrgA K05338 lrgA; holin-like protein
D SCA_1926 lrgB; putative holin-like protein LrgB K05339 lrgB; holin-like protein LrgB
D SCA_1545 agrB; accessory gene regulator B K07813 agrB; accessory gene regulator B
D SCA_1546 agrD; AgrD protein K07800 agrD; AgrD protein
D SCA_1547 agrC; autoinducer sensor protein AgrC, probably truncated K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SCA_1549 agrA; Accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SCA_1894 narG; respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SCA_1893 narH; nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SCA_1891 narI; NarI protein K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SCA_1892 narJ; NarJ protein K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D SCA_1459 vraS; histidine kinase sensor K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
D SCA_1458 vraR; putative response regulator K07694 vraR; two-component system, NarL family, vancomycin resistance associated response regulator VraR
D SCA_1889 nreB; NreB protein K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D SCA_1888 nreC; response regulator of the two-component regulatory K07696 nreC; two-component system, NarL family, response regulator NreC
D SCA_1890 nreA; NreA protein K10851 nreA; nitrogen regulatory protein A
D SCA_1887 narT; nitrate transporter K10850 narT; MFS transporter, NNP family, putative nitrate transporter
D SCA_0957 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_2364 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_0707 putative cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D SCA_0708 putative cytochrome D ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D SCA_1454 conserved hypothetical protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SCA_1614 mnaA; UDP-GlcNAc 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:sca02024]
D SCA_1637 luxS; LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SCA_0953 putative Hfq protein K03666 hfq; host factor-I protein
D SCA_1012 trpE; putative anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SCA_1013 trpG; putative anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SCA_2373 hypothetical protein K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D SCA_2407 fadE; putative acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SCA_2089 vraA; putative Co-A ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SCA_1375 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D SCA_0268 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D SCA_1546 agrD; AgrD protein K07800 agrD; AgrD protein
D SCA_1545 agrB; accessory gene regulator B K07813 agrB; accessory gene regulator B
D SCA_1547 agrC; autoinducer sensor protein AgrC, probably truncated K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SCA_1549 agrA; Accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SCA_0785 phenol soluble modulin K20337 psmB; phenol-soluble modulin beta
D SCA_0784 phenol soluble modulin K20337 psmB; phenol-soluble modulin beta
D SCA_0592 oppA; putative peptide binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SCA_0588 oppB; oligopeptide transport system permease protein homolog OppB K15581 oppB; oligopeptide transport system permease protein
D SCA_0589 oppC; putative oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D SCA_0590 oppD; oligopeptide transport system ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SCA_0591 oppF; oligopeptide transport system ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SCA_0936 appA; putative oligopeptide-binding protein AppA (Precursor) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SCA_1027 truncated putative extracellular solute-binding lipoprotein (fragment 1) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SCA_1025 opp-2B; putative oligopeptide transporter membrane permease domain, Opp-2B K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SCA_0939 appB; putative oligopeptide transport system permease protein AppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SCA_1024 opp-2C; putative oligopeptide transporter membrane permease domain, Opp-2c K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SCA_0940 appC; putative oligopeptide transport system permease protein AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SCA_0937 appD'; truncated oligopeptide transport ATP-binding protein appD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SCA_1023 opp-2D; putative oligopeptide transporter ATPase domain, Opp-2D K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SCA_0938 appF; putative oligopeptide transport system ATP-binding protein AppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SCA_0672 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SCA_1592 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCA_2248 putative lipoprotein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCA_2075 hypothetical protein K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D SCA_0642 putative ComK family protein K02250 comK; competence protein ComK
D SCA_1248 secDF; putative protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D SCA_0191 secE; (P36253) Preprotein translocase secE subunit,InterPro: Protein secE/sec61-gamma protein; Hypothetical protein; Sca_0191 K03073 secE; preprotein translocase subunit SecE
D SCA_0430 secG; putative preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SCA_2201 putative preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SCA_1715 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D SCA_1249 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D SCA_2197 putative preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCA_0401 secA; preprotein translocase secA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCA_0858 ftsY; putative cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SCA_0860 ffh'; truncated signal recognition particle homolog (fragment 1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SCA_0861 ffh''; truncated signal recognition particle homolog (fragment 2) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:sca02040]
D SCA_1910 conserved hypothetical protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SCA_1183 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SCA_0428 eno; 2-phospho-D-glycerate hydrolase (enolase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:sca01501]
D SCA_0592 oppA; putative peptide binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SCA_0588 oppB; oligopeptide transport system permease protein homolog OppB K15581 oppB; oligopeptide transport system permease protein
D SCA_0589 oppC; putative oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D SCA_0590 oppD; oligopeptide transport system ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SCA_0591 oppF; oligopeptide transport system ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SCA_0292 ATP-binding cassette transporter A K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D SCA_0794 pbpA; penicillin-binding protein Pbp1 K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-]
D SCA_1173 pbpF; penicillin-binding protein Pbp2b K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-]
D SCA_1084 pbp2; penicillin-binding protein 2 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01502 Vancomycin resistance [PATH:sca01502]
D SCA_1583 ddlA; putative D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SCA_1043 alr; putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SCA_1576 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SCA_1582 murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SCA_2284 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SCA_0795 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SCA_1062 murG; putative undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SCA_1643 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:sca01503]
D SCA_1243 conserved hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SCA_1334 conserved hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SCA_0625 putative protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SCA_0303 putative two-component sensor histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SCA_0302 putative response regulator protein K19078 graR; two-component system, OmpR family, response regulator protein GraR
D SCA_0534 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SCA_0535 dltB; DltB membrane protein K03739 dltB; membrane protein involved in D-alanine export
D SCA_0536 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SCA_0537 dltD; poly D-alanine transfer protein K03740 dltD; D-alanine transfer protein
D SCA_1002 fmtC; oxacillin resistance-related FmtC protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SCA_0304 putative ABC transporter ATP-binding protein K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SCA_0305 putative ABC transporter permease K19080 vraG; cationic antimicrobial peptide transport system permease protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:sca01000]
C 01001 Protein kinases [BR:sca01001]
D SCA_0840 pknB; putative serine/threonine-protein kinase PknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SCA_1571 rsbW; anti-sigmaB factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SCA_2356 capB; capsular polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SCA_1298 phoR; putative alkaline phosphatase synthesis sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SCA_1117 srrB; staphylococcal respiratory response protein SrrB K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D SCA_2455 two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SCA_0353 saeS; histidine protein kinase SaeS K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D SCA_0303 putative two-component sensor histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SCA_1059 putative sensor protein histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SCA_1864 conserved hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SCA_1459 vraS; histidine kinase sensor K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
D SCA_1889 nreB; NreB protein K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D SCA_1424 putative two-component sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D SCA_1923 lytS; two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SCA_1547 agrC; autoinducer sensor protein AgrC, probably truncated K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SCA_2368 conserved hypothetical protein, similar to two-component sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:sca01009]
D SCA_1304 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCA_0839 putative Serine/threonine phosphatase, family 2C protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:sca01002]
D SCA_0810 lsp; lipoprotein signal peptidase (signal peptidase II) K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SCA_1271 pcp; putative pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D SCA_0050 guaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SCA_2385 conserved hypothetical protein K07010 K07010; putative glutamine amidotransferase
D SCA_0404 putative LysM family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SCA_0692 purF; putative amidophosphoribosyltransferase PurF K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SCA_0105 gltB; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SCA_1657 glmS; putative glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SCA_1448 conserved hypothetical protein K05520 yhbO; deglycase [EC:3.5.1.124]
D SCA_0210 Choloylglycine hydrolase family protein K24041 yxeI; penicillin V amidase [EC:3.5.1.11]
D SCA_2003 srtA; sortase protein K07284 srtA; sortase A [EC:3.4.22.70]
D SCA_1545 agrB; accessory gene regulator B K07813 agrB; accessory gene regulator B
D SCA_2267 hypothetical protein K07052 K07052; CAAX protease family protein
D SCA_1942 hypothetical protein K07052 K07052; CAAX protease family protein
D SCA_1542 conserved hypothetical protein K07052 K07052; CAAX protease family protein
D SCA_2338 hypothetical protein K07052 K07052; CAAX protease family protein
D SCA_1808 conserved hypothetical protein K07052 K07052; CAAX protease family protein
D SCA_2236 hypothetical protein K07052 K07052; CAAX protease family protein
D SCA_0646 putative membrane protein K07052 K07052; CAAX protease family protein
D SCA_1941 hypothetical protein K07052 K07052; CAAX protease family protein
D SCA_0599 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SCA_1643 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SCA_0547 cytosol aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D SCA_1358 pepV; putative Xaa-His dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCA_0033 dapE; putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCA_2333 putative succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCA_2362 hypothetical protein K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SCA_0391 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SCA_1133 putative peptidase K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SCA_2056 putative allantoate amidohydrolase K02083 allC; allantoate deiminase [EC:3.5.3.9]
D SCA_2377 lytM; putative LytM-like peptidoglycan hydrolase K08259 lytM; lysostaphin [EC:3.4.24.75]
D SCA_1462 map; putative methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SCA_1153 putative peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SCA_1452 ampS; aminopeptidase ampS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D SCA_0162 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SCA_1352 pepA; putative glutamyl-aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D SCA_1011 putative peptidase K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D SCA_0897 putative PDZ_metalloprotease family protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SCA_2075 hypothetical protein K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D SCA_1334 conserved hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SCA_0625 putative protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SCA_0291 pbp4; penicillin binding protein 4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SCA_2445 pbp4; penicillin binding protein 4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SCA_0419 clpP; putative ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SCA_0980 lexA; DNA damage-inducible repressor LexA (DinR) K01356 lexA; repressor LexA [EC:3.4.21.88]
D SCA_0572 sipA; type-I signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SCA_0573 sipB; type-1 signal peptidase 1B K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SCA_1064 putative protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D SCA_1171 putative membrane protein K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D SCA_0887 hslV; ATP-dependent protease HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D SCA_1224 truncated putative peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D SCA_1225 putative peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:sca01003]
D SCA_0619 putative glycosyl transferase K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D SCA_1084 pbp2; penicillin-binding protein 2 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SCA_1336 sgtA; putative transglycosylase K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SCA_1447 monofunctional glycosyltransferase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D SCA_0281 tagA; putative teichoic acid biosynthesis protein K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D SCA_2110 tagE; putative teichoic acid biosynthesis protein E K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D SCA_0395 llm; putative phospho-N-acetylmuramyl-pentapeptide-transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SCA_0056 putative glycosyl transferase K22708 tarS; poly(ribitol-phosphate) beta-N-acetylglucosaminyltransferase [EC:2.4.1.355]
D SCA_2101 hypothetical protein K25617 csbB; lipoteichoic acid polyisoprenyl-phosphate beta-N-acetylglucosaminyltransferase [EC:2.4.-.-]
D SCA_0869 putative membrane protein K25619 yfhO; lipoteichoic acid glycosylation protein
C 01005 Lipopolysaccharide biosynthesis proteins [BR:sca01005]
D SCA_0395 llm; putative phospho-N-acetylmuramyl-pentapeptide-transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SCA_2344 capM; capsular polysaccharide synthesis enzyme Cap5M K13012 wbqP; O-antigen biosynthesis protein WbqP
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:sca01011]
D SCA_1627 murA2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SCA_1603 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SCA_0386 murB; putative UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SCA_1347 murC; UDP-N-Aacerylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SCA_0796 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SCA_0621 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SCA_1583 ddlA; putative D-alanine-D-alanine ligase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SCA_1750 fmhB; putative FmhB protein K11693 femX; peptidoglycan pentaglycine glycine transferase (the first glycine) [EC:2.3.2.16]
D SCA_1019 femA; factor essential for expression of methicillin resistance, FemA K11694 femA; peptidoglycan pentaglycine glycine transferase (the second and third glycine) [EC:2.3.2.17]
D SCA_1020 femB; factor essential for expression of methicillin resistance, FemB K11695 femB; peptidoglycan pentaglycine glycine transferase (the fourth and fifth glycine) [EC:2.3.2.18]
D SCA_1043 alr; putative alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SCA_1576 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SCA_0770 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SCA_0795 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferas e K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SCA_1062 murG; putative undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SCA_0330 bacA; putative undecaprenol kinase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SCA_1061 putative membrane integrated acid phosphatase family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SCA_1084 pbp2; penicillin-binding protein 2 K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SCA_0794 pbpA; penicillin-binding protein Pbp1 K12552 pbpA; penicillin-binding protein 1 [EC:3.4.-.-]
D SCA_1173 pbpF; penicillin-binding protein Pbp2b K12553 pbp3; penicillin-binding protein 3 [EC:3.4.-.-]
D SCA_0291 pbp4; penicillin binding protein 4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SCA_2445 pbp4; penicillin binding protein 4 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SCA_1336 sgtA; putative transglycosylase K12551 sgtA; monofunctional glycosyltransferase [EC:2.4.99.28]
D SCA_1447 monofunctional glycosyltransferase K04478 sgtB; monofunctional glycosyltransferase [EC:2.4.99.28]
D SCA_1643 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SCA_0404 putative LysM family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SCA_2377 lytM; putative LytM-like peptidoglycan hydrolase K08259 lytM; lysostaphin [EC:3.4.24.75]
D SCA_2003 srtA; sortase protein K07284 srtA; sortase A [EC:3.4.22.70]
D SCA_1243 conserved hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:sca01004]
D SCA_0853 fabD; putative malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SCA_0584 FabH; putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SCA_0585 fab; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SCA_0854 fabG; 3-oxoacyl-(acyl-carrier protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_2279 fabG5; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_0921 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_2287 putative short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SCA_1602 fabZ; putative hydroxymyristoyl-(acyl carrier protein) dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SCA_0612 fabI; putative trans-2-enoyl-ACP reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D SCA_1338 acsA; acetyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_2259 acsA; acetate-CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D SCA_2407 fadE; putative acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SCA_2089 vraA; putative Co-A ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SCA_0852 plsX; putative fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SCA_0994 putative membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SCA_1333 conserved hypothetical protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:sca01006]
D SCA_1145 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SCA_1104 hypothetical protein K00805 hepS; heptaprenyl diphosphate synthase component 1 [EC:2.5.1.30]
D SCA_1102 gerCC; putative heptaprenyl diphosphate synthase component II K24873 hepT; heptaprenyl diphosphate synthase component 2 [EC:2.5.1.30]
D SCA_0895 uppS; putative undecaprenyl pyrophosphatase synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SCA_2274 similar to squalene synthase K10208 crtM; 4,4'-diapophytoene synthase [EC:2.5.1.96]
D SCA_0952 miaA; putative tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SCA_0650 putative prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D SCA_0742 ctaB; putative protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:sca01007]
D SCA_0184 gltX; putative glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SCA_1335 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SCA_0596 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SCA_0186 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SCA_0259 argS; putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SCA_0140 metS; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SCA_0806 ileS; putative isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SCA_1269 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SCA_1364 leuS''; truncated leucyl-tRNA synthetase (fragment 2) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCA_1365 leuS'; truncated leucyl-tRNA synthetase (fragment 1) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCA_0169 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SCA_1241 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCA_1088 asnS; putative asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SCA_1242 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SCA_1187 glyS; putative glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SCA_2465 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SCA_0898 proS; putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SCA_0282 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SCA_1289 thrS; threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SCA_1230 alaS; putative alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SCA_0756 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SCA_0757 pheT; putative phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SCA_0010 putative aminotransferase K08969 mtnE; L-glutamine---4-(methylsulfanyl)-2-oxobutanoate aminotransferase [EC:2.6.1.117]
D SCA_0656 putative aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SCA_0371 hisC; putative histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_0634 hisC; putative histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SCA_0209 kbl; putative 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D SCA_0565 rocD; ornithine aminotransferase K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D SCA_0283 putative aminotransferase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D SCA_2223 bioA; putative adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D SCA_1273 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SCA_1437 gsaB; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D SCA_1357 dat; D-alanine aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D SCA_0215 ilvE; branched-chain amino acid aminotroansferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SCA_0878 putative aminotransferase, class V K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:sca00194]
D SCA_1605 atpE; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SCA_1606 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SCA_1607 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SCA_1608 atpA''; truncated ATP synthase alpha chain (fragment 2) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SCA_1610 atpH; putative ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SCA_1611 atpF; ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SCA_1612 atpE; putative ATP synthase C chain K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SCA_1613 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:sca03000]
D SCA_0104 gltC; putative transcription activator of glutamate synthase operon K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon
D SCA_2371 hypothetical protein K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D SCA_2243 putative transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D SCA_0929 putative LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D SCA_0676 lacR; putative lactose phosphotransferase system repressor lacR K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D SCA_0346 putative transcriptional regulators of sugar metabolism K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SCA_1186 truncated CBS domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D SCA_2422 hypothetical protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCA_1342 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCA_1772 galR; Galactose operon repressor GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCA_2423 conserved hypothetical protein, similar to rbs operon repressor RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SCA_0111 putative trehalose operon transcriptional regulator K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D SCA_0918 putative GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D SCA_1649 conserved hypothetical protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D SCA_0172 GntR family regulatory protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D SCA_1950 gntR; putative gluconate operon transcriptional repressor K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor
D SCA_0084 similar to ica operon transcriptional regulator K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor
D SCA_1970 putative transcription regulator MarR family K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor
D SCA_0333 MarR family regulatory protein K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA
D SCA_1874 putative transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D SCA_2432 MarR family regulatory protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D SCA_1859 putative transcriptional regulator K21454 tcaR; MarR family transcriptional regulator, teicoplanin-associated locus regulator
D SCA_1881 conserved hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D SCA_0655 putative transcriptional regulator, MarR type K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D SCA_0958 putative HTH-type transcriptional regulator, MerR family K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D SCA_1124 fur; iron uptake regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D SCA_1175 fur; putative ferric uptake regulator K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator
D SCA_1434 perR; transcription regulator Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D SCA_2083 putative transcriptional regulator protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D SCA_1238 conserved hypothetical protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D SCA_2330 putative transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D SCA_0113 similar to transcriptional regulator (ArsR family) K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D SCA_2031 conserved hypothetical protein K10947 K10947; PadR family transcriptional regulator
D SCA_0070 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D SCA_0276 putative metal dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D SCA_1090 birA; putative bifunctional protein [includes: Biotin operon repressor; Biotin--[acetyl-CoA-carboxylase] synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SCA_2164 cudC; putative transcriptional regulator of cud operon K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator
D SCA_0146 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D SCA_1553 conserved hypothetical protein K01926 rex; redox-sensing transcriptional repressor
D SCA_0890 codY; transcription pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D SCA_1536 hypothetical protein K07727 K07727; putative transcriptional regulator
D SCA_1839 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D SCA_1575 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D SCA_0998 glcT; transcription antiterminator GlcT K03480 glcT; transcriptional antiterminator
D SCA_1659 conserved hypothetical protein K03483 mtlR; mannitol operon transcriptional activator
D SCA_2441 putative transcriptional regulator K02538 manR; mannose operon transcriptional activator
D SCA_2318 srlM; putative regulator of sorbitol operon K03491 licR; probable licABCH operon transcriptional regulator
D SCA_1588 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D SCA_2062 conserved hypothetical protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein
D SCA_0006 putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCA_0015 putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCA_0947 glpP; putative glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D SCA_1144 argR; arginine repressor ArgR K03402 argR; transcriptional regulator of arginine metabolism
D SCA_2082 putative transcriptional regulator protein K03402 argR; transcriptional regulator of arginine metabolism
D SCA_1204 hrcA; putative heat-inducible transcriptional repressor K03705 hrcA; heat-inducible transcriptional repressor
D SCA_2227 putative transcriptional activator TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SCA_1596 tenA; putative transcriptional activator tenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D SCA_2076 hypothetical protein K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10]
D SCA_0178 ctsR; transcription repressor of class III stress genes K03708 ctsR; transcriptional regulator of stress and heat shock response
D SCA_0423 putative transcriptional regulator with sugar binding domain K05311 cggR; central glycolytic genes regulator
D SCA_0812 pyrR; putative pyrimidine operon regulatory protein / uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SCA_1951 conserved hypothetical protein K07734 paiB; transcriptional regulator
D SCA_1292 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
D SCA_0642 putative ComK family protein K02250 comK; competence protein ComK
D SCA_0791 mraZ; conserved hypothetical protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:sca03021]
D SCA_1709 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SCA_0199 rpoB; RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SCA_0200 rpoC; RNA polymerase beta-prime chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SCA_1631 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SCA_0827 putative DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SCA_1183 sigA; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D SCA_1570 sigB; sigma factor B K03090 sigB; RNA polymerase sigma-B factor
D SCA_0190 sigH; putative RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
D SCA_0901 nusA; putative transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SCA_1148 nusB; putative N utilization substance protein NusB K03625 nusB; transcription antitermination protein NusB
D SCA_0192 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D SCA_1573 rsbU; putative sigmaB regulation protein RsbU K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D SCA_1572 rsbV; putative anti-sigmaB factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D SCA_1571 rsbW; anti-sigmaB factor K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D SCA_1222 greA; putative transcription elongation factor,similar to GreA K03624 greA; transcription elongation factor GreA
D SCA_1624 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:sca03019]
D SCA_0856 rnc; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SCA_0713 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SCA_0915 putative hydrolase of the metallo-beta-lactamase superfamily K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SCA_0927 putative exported protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SCA_0432 rnr; putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SCA_1416 conserved hypothetical protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D SCA_1581 putative helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SCA_1179 putative helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SCA_0368 recQ; DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SCA_1113 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SCA_0428 eno; 2-phospho-D-glycerate hydrolase (enolase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCA_0914 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SCA_1624 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D SCA_1304 pfk; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SCA_1202 dnaK; chaperone protein DnaK (Hsp70) K04043 dnaK; molecular chaperone DnaK
D SCA_1540 groEL; GroEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCA_0953 putative Hfq protein K03666 hfq; host factor-I protein
D SCA_1945 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D SCA_0414 putative P-loop-containing kinase K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:sca03011]
D SCA_1108 putative 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SCA_0891 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SCA_1729 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SCA_1326 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SCA_1718 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SCA_0026 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SCA_0205 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SCA_1721 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SCA_1702 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SCA_1736 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SCA_1710 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SCA_0204 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SCA_1711 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SCA_0977 rpsN; putative 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SCA_1722 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SCA_0913 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SCA_0863 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SCA_1726 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SCA_0028 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SCA_1731 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SCA_1207 rpsT; putative 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SCA_1197 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SCA_0194 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SCA_1732 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SCA_1735 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SCA_1734 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SCA_1723 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SCA_1720 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SCA_2461 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SCA_0195 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SCA_0193 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SCA_0196 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SCA_1703 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SCA_1725 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SCA_1716 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SCA_1728 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SCA_1708 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SCA_1719 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SCA_0866 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SCA_1284 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SCA_1258 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SCA_1730 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SCA_1733 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SCA_1724 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SCA_1256 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SCA_0845 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SCA_1727 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SCA_1717 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SCA_1623 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SCA_0754 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SCA_0976 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SCA_0001 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SCA_1285 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SCA_1712 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SCA_0151 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D SCA_0203 putative ribosomal protein K07590 RP-L7A; large subunit ribosomal protein L7A
D SCA_5S_rRNA_A 5S_rRNA_A; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_E 5S_rRNA_E; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_B2 5S_rRNA_B2; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_B 5S_rRNA_B; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_C 5S_rRNA_C; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_16S_rRNA_D 16S_rRNA_D; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_E 16S_rRNA_E; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_A 16S_rRNA_A; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_C 16S_rRNA_C; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_B 16S_rRNA_B; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_23S_rRNA_B 23S_rRNA_B; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_D 23S_rRNA_D; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_C 23S_rRNA_C; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_A 23S_rRNA_A; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_E 23S_rRNA_E; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:sca03009]
D SCA_0856 rnc; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SCA_1189 era; putative GTP-binding protein Era K03595 era; GTPase
D SCA_1255 obg; Spo0B-associated GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D SCA_0901 nusA; putative transcription elongation protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D SCA_1148 nusB; putative N utilization substance protein NusB K03625 nusB; transcription antitermination protein NusB
D SCA_0192 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D SCA_1360 RNA pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SCA_0143 ribosomal RNA adenine dimethylase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SCA_0837 putative NusB_Sun RNA binding protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SCA_0197 putative rRNA methylase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SCA_0749 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SCA_1199 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SCA_0005 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SCA_0792 mraW; putative MraW methylase family S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SCA_0130 tetrapyrrole (corrin/porphyrin) methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SCA_0188 spoU; putative rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SCA_2451 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SCA_0702 putative SAM methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SCA_0838 putative Radical SAM family protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SCA_1469 putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SCA_1119 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SCA_0609 putative pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SCA_1425 conserved hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SCA_0811 rluD; putative ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SCA_1556 conserved hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SCA_2034 putative acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D SCA_1989 hypothetical protein K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-]
D SCA_0864 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D SCA_1200 putative ribosomal protein L11 methyltransferase (PrmA) family protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SCA_1228 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SCA_0187 conserved hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D SCA_1581 putative helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SCA_1179 putative helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SCA_0841 conserved hypothetical protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SCA_1107 putative GTP-binding protein K03977 engA; GTPase
D SCA_0880 putative GTPase K14540 rbgA; ribosome biogenesis GTPase A
D SCA_0955 similar to GTP-binding protein HflX K03665 hflX; GTPase
D SCA_1219 conserved hypothetical protein K06948 yqeH; 30S ribosome assembly GTPase
D SCA_1619 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SCA_1245 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SCA_0910 rbfA; putative ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D SCA_0900 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D SCA_2472 conserved hypothetical protein K14761 rlbA; ribosome-associated protein
D SCA_1214 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D SCA_1192 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D SCA_1217 conserved hypothetical protein K07574 yhbY; RNA-binding protein
D SCA_0400 putative ribosome-associated protein K05808 hpf; ribosome hibernation promoting factor
D SCA_0018 putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
D SCA_0753 conserved hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:sca03016]
D SCA_1129 rnz; putative ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SCA_1091 pap; putative poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SCA_0898 proS; putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SCA_0806 ileS; putative isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SCA_1364 leuS''; truncated leucyl-tRNA synthetase (fragment 2) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCA_1365 leuS'; truncated leucyl-tRNA synthetase (fragment 1) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCA_0140 metS; Methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SCA_0259 argS; putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SCA_0169 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SCA_1241 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCA_1230 alaS; putative alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SCA_1088 asnS; putative asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SCA_1187 glyS; putative glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SCA_0282 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SCA_1289 thrS; threonyl-tRNA synthetase 1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SCA_2465 serS; Seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SCA_0186 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SCA_1269 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SCA_1242 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SCA_0756 pheS; Phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SCA_0757 pheT; putative phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SCA_1335 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SCA_0596 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SCA_1244 putative D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SCA_1412 hit; hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SCA_1355 putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SCA_1704 truA; putative tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SCA_0911 truB; putative tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SCA_1234 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1322 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1401 nifS; putative Cysteine desulfurase/aminotransferase,class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1619 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SCA_0952 miaA; putative tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SCA_0003 trmE; putative tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SCA_0004 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SCA_0002 rnpA; putative ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SCA_0184 gltX; putative glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SCA_0345 YbaK family protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SCA_0222 putative deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SCA_0168 dus1; putative tRNA-dihydrouridine synthase 1 K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SCA_0941 putative radical SAM superfamily protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D SCA_1198 putative radical SAM family protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D SCA_0885 gid; glucose-inhibited division protein gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SCA_0865 trmD; putative tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SCA_1181 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SCA_1429 putative rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SCA_0755 SpoU rRNA Methylase family protein K03437 spoU; RNA methyltransferase, TrmH family
D SCA_1233 putative (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SCA_0545 conserved hypothetical protein with HesB-like domain K13628 iscA; iron-sulfur cluster assembly protein
D SCA_1251 queA; putative S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SCA_0360 putative ExsB family protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SCA_0359 putative 6-pyruvoyltetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SCA_0358 putative organic radical activating enzyme K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SCA_0376 putative GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SCA_1430 conserved hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SCA_2022 truncated conserved hypothetical protein (fragment 1) K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D SCA_2021 truncated conserved hypothetical protein (fragment 2) K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D SCA_1250 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SCA_1320 thiI''; truncated putative thiamine biosynthesis ATP pyrophosphatase (fragment 2) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SCA_1321 thiI'; truncated putative thiamine biosynthesis ATP pyrophosphatase (fragment 1) K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SCA_0160 putative PP-loop family protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SCA_1557 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SCA_1555 gcp; putative O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SCA_1558 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SCA_1240 conserved hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D SCA_0752 putative nucleotidyltransferase K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D SCA_0432 rnr; putative ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SCA_0914 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:sca03012]
D SCA_0904 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SCA_1286 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SCA_1554 putative ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SCA_0892 tsf; putative elongation factor TS K02357 tsf; elongation factor Ts
D SCA_0207 tufA; translational elongation factor TU K02358 tuf; elongation factor Tu
D SCA_0206 fusA; elongation factor EF-G K02355 fusA; elongation factor G
D SCA_1621 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SCA_0894 frr; putative ribosome recycling factor K02838 frr; ribosome recycling factor
D SCA_1620 conserved hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SCA_0152 pth; (Q8CQU9) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH),(P37470) Peptidyl-tRNA hydrolase (EC 3.1.1.29) (PTH) (Stage V sporulation protein C),InterPro: Peptidyl-tRNA hydrolase; Hypothetical protein; Sca_0152 K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SCA_1713 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SCA_1152 efp; putative translation elongation factor EF-P K02356 efp; elongation factor P
D SCA_0402 prfB''; peptide chain release factor RF-2, major part K02836 prfB; peptide chain release factor 2
D SCA_0623 prfC; putative peptide chain release factor RF-3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:sca03110]
D SCA_0582 clpB; ClpB chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SCA_0181 clpC; ClpC ATPase family protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SCA_1953 clpL; putative ATP-dependent Clp proteinase chain clpL K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D SCA_1280 clpX; protease ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SCA_0889 hslU; ATP-dependent hsl protease ATP-binding subunit hslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D SCA_1202 dnaK; chaperone protein DnaK (Hsp70) K04043 dnaK; molecular chaperone DnaK
D SCA_1540 groEL; GroEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCA_1201 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SCA_0163 hsp33; heat-shock protein HSP33 (33 kDa chaperonin) K04083 hslO; molecular chaperone Hsp33
D SCA_1203 grpE; putative GrpE protein (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D SCA_1882 hypothetical protein K13993 HSP20; HSP20 family protein
D SCA_1541 groES; GroES protein K04078 groES; chaperonin GroES
D SCA_1334 conserved hypothetical protein K04771 degP; serine protease Do [EC:3.4.21.107]
D SCA_0625 putative protease K04771 degP; serine protease Do [EC:3.4.21.107]
D SCA_0162 ftsH; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SCA_1613 atpB; ATP synthase A chain K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SCA_0559 putative peptidyl-prolyl cis-trans isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SCA_1415 prsA1; putative foldase protein prsA 1 [Precursor] K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D SCA_0763 trxA; putative thioredoxin TrxA K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:sca04131]
D SCA_1101 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D SCA_2144 fda; fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SCA_0424 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SCA_1912 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_0032 gpm3; putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_1698 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_1303 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system [BR:sca04121]
C 03051 Proteasome
C 03032 DNA replication proteins [BR:sca03032]
D SCA_1075 conserved hypothetical protein with RNase H domain K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D SCA_1105 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SCA_2474 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D SCA_2460 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SCA_0479 putative IstB-like ATP-binding protein, phage associated K02315 dnaC; DNA replication protein DnaC
D SCA_1184 dnaG; putative DNA primase DnaG K02316 dnaG; DNA primase [EC:2.7.7.101]
D SCA_1291 dnaB; chromosome replication initiation/membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D SCA_1290 dnaI; primosomal protein K11144 dnaI; primosomal protein DnaI
D SCA_0027 ssb; putative single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_1600 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_0475 ssb; putative single strand DNA binding protein,phage associated K03111 ssb; single-strand DNA-binding protein
D SCA_1308 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCA_0899 polC; homolog of DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SCA_2473 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCA_1208 putative DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCA_0125 holB; putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCA_1466 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCA_0119 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCA_0881 rnhB; putative RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SCA_0758 rnhC; putative ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SCA_1297 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCA_1477 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SCA_1076 putative 5'-3' exonuclease K23786 exoA; 5'-3' exonuclease [EC:3.1.11.-]
D SCA_2469 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SCA_2470 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SCA_0996 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SCA_0995 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SCA_0884 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SCA_1740 topB; putative DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:sca03036]
D SCA_0856 rnc; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SCA_2144 fda; fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SCA_1105 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SCA_2474 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D SCA_1644 dps; general stress protein 20U K04047 dps; starvation-inducible DNA-binding protein
D SCA_0953 putative Hfq protein K03666 hfq; host factor-I protein
D SCA_0857 smc; putative chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D SCA_1121 scpA; putative segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D SCA_1120 scpB; putative segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D SCA_0798 ftsA; putative cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SCA_0158 putative cell division protein K13052 divIC; cell division protein DivIC
D SCA_1348 FtsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SCA_0916 ftsK; putative DNA translocase FtsK (SpoIIIE) K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SCA_0793 putative cell division protein K03586 ftsL; cell division protein FtsL
D SCA_0797 div1b; putative cell division protein K03589 ftsQ; cell division protein FtsQ
D SCA_0739 putative cell division protein K03588 ftsW; cell division protein FtsW
D SCA_1886 putative cell division protein K03588 ftsW; cell division protein FtsW
D SCA_0799 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SCA_0759 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D SCA_1243 conserved hypothetical protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SCA_1323 putative septation ring formation regulator K06286 ezrA; septation ring formation regulator
D SCA_0805 conserved hypothetical protein K04074 divIVA; cell division initiation protein
D SCA_0802 conserved hypothetical protein (similar to ylmF) K09772 sepF; cell division inhibitor SepF
D SCA_1260 conserved hypothetical protein K03570 mreC; rod shape-determining protein MreC
D SCA_1259 conserved hypothetical protein K03571 mreD; rod shape-determining protein MreD
D SCA_1584 conserved hypothetical protein K05837 rodA; rod shape determining protein RodA
D SCA_0006 putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCA_0015 putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCA_0996 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SCA_0995 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SCA_0004 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SCA_0005 gidB; glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SCA_0885 gid; glucose-inhibited division protein gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SCA_0886 xerC; putative site-specific recombinase XerC K03733 xerC; integrase/recombinase XerC
D SCA_1123 xerD; putative site-specific recombinase XerD K04763 xerD; integrase/recombinase XerD
D SCA_0155 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D SCA_1666 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SCA_1279 putative GTP-binding protein K03978 engB; GTP-binding protein
D SCA_0416 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:sca03400]
D SCA_2000 adaB; putative methylated DNA-protein cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SCA_0233 ung; putative uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SCA_1843 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SCA_1441 putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SCA_1086 nth; putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SCA_2148 putative mutator protein mutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SCA_0053 mutT; mutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SCA_1392 conserved hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SCA_0486 dut; putative dUTP pyrophosphatase, phage associated K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SCA_2193 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D SCA_1270 tag; putative DNA-3-methyladenine glycosidase K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SCA_1296 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SCA_1178 putative AP endonuclease family 2 protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D SCA_1247 putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SCA_1477 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SCA_1297 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SCA_0408 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SCA_0407 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SCA_0764 uvrC; putative excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SCA_1478 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCA_2307 Superfamily I DNA and RNA helicases K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SCA_0199 rpoB; RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SCA_0200 rpoC; RNA polymerase beta-prime chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SCA_1709 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SCA_1631 hypothetical protein K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SCA_0827 putative DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SCA_0153 mfd; putative transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SCA_0945 mutS; putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D SCA_0762 mutS2; MutS2-like protein K07456 mutS2; DNA mismatch repair protein MutS2
D SCA_0946 mutL; putative DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D SCA_1147 putative exonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SCA_1146 putative exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SCA_1308 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SCA_0899 polC; homolog of DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SCA_2473 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SCA_1208 putative DNA-binding protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SCA_0125 holB; putative DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SCA_1466 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D SCA_0119 dnaX; DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SCA_0027 ssb; putative single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_1600 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_0475 ssb; putative single strand DNA binding protein,phage associated K03111 ssb; single-strand DNA-binding protein
D SCA_2230 hypothetical protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D SCA_1231 conserved hypothetical protein K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SCA_0926 recA; RecA protein (recombinase A) K03553 recA; recombination protein RecA
D SCA_1253 ruvA; holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA
D SCA_1252 ruvB; holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SCA_0830 priA; putative primosomal replication factor Y (primosomal protein N') K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SCA_0988 putative ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50
D SCA_0987 putative exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D SCA_0182 radA; DNA repair protein radA K04485 radA; DNA repair protein RadA/Sms
D SCA_2471 recF; DNA repair and genetic recombination protein K03629 recF; DNA replication and repair protein RecF
D SCA_0850 recG; putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SCA_1188 recO; putative recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D SCA_0121 recR; putative recombination protein K06187 recR; recombination protein RecR
D SCA_1143 recN; similar to DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D SCA_1083 recU; putative recombination protein U K03700 recU; recombination protein U
D SCA_0575 addA; putative ATP-dependent nuclease, subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SCA_0574 addB; putative ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SCA_2469 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SCA_2470 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SCA_0884 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SCA_1105 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SCA_0368 recQ; DNA helicase recQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SCA_1113 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D SCA_1467 dinP; similar to DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SCA_1008 truncated ImpB/MucB/SamB family protein (fragment 1) K03502 umuC; DNA polymerase V
D SCA_1009 truncated ImpB/MucB/SamB family protein (fragment 2) K03502 umuC; DNA polymerase V
D SCA_0980 lexA; DNA damage-inducible repressor LexA (DinR) K01356 lexA; repressor LexA [EC:3.4.21.88]
D SCA_1446 putative regulatory protein K03565 recX; regulatory protein
D SCA_0761 DNA polymerase family X protein K02347 polX; DNA polymerase (family X)
D SCA_1089 conserved hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SCA_0379 nrdE; ribonuceloside diphosphate reductase alpha chain K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SCA_0380 nrdF; ribonucleoside-diphosphate reductase beta chain K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SCA_1309 conserved hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:sca03029]
D SCA_0904 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SCA_1286 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D SCA_0892 tsf; putative elongation factor TS K02357 tsf; elongation factor Ts
D SCA_0207 tufA; translational elongation factor TU K02358 tuf; elongation factor Tu
D SCA_0206 fusA; elongation factor EF-G K02355 fusA; elongation factor G
D SCA_1189 era; putative GTP-binding protein Era K03595 era; GTPase
D SCA_1335 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SCA_1364 leuS''; truncated leucyl-tRNA synthetase (fragment 2) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCA_1365 leuS'; truncated leucyl-tRNA synthetase (fragment 1) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SCA_1241 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SCA_1187 glyS; putative glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D SCA_0259 argS; putative arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SCA_1472 gatA; glutamyl-tRNAGln amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SCA_1471 gatB; glutamyl-tRNAGln amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SCA_1473 gatC; glutamyl-tRNAGln amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SCA_0027 ssb; putative single-strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_1600 ssb; single strand DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SCA_0475 ssb; putative single strand DNA binding protein,phage associated K03111 ssb; single-strand DNA-binding protein
D SCA_1202 dnaK; chaperone protein DnaK (Hsp70) K04043 dnaK; molecular chaperone DnaK
D SCA_1203 grpE; putative GrpE protein (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D SCA_1540 groEL; GroEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCA_1541 groES; GroES protein K04078 groES; chaperonin GroES
D SCA_1201 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SCA_1234 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1322 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1401 nifS; putative Cysteine desulfurase/aminotransferase,class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1666 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D SCA_0742 ctaB; putative protoheme IX farnesyltransferase CtaB K02257 COX10; heme o synthase [EC:2.5.1.141]
D SCA_0741 ctaA; putative heme A synthase CtaA K02259 COX15; heme a synthase [EC:1.17.99.9]
D SCA_1592 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCA_2248 putative lipoprotein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:sca02000]
D SCA_1439 ABC transporter, ATP-binding protein K24708 K24708; ATP-binding cassette, subfamily B, putative efflux pump [EC:7.6.2.-]
D SCA_1974 ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SCA_1973 putative ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SCA_0292 ATP-binding cassette transporter A K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D SCA_0332 cydC; putative ABC transporter required for expression of cytochrome bd, CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D SCA_0331 cydD; putative ABC transporter required for expression of cytochrome bd, CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D SCA_0057 vba; ABC transporter ATP-binding protein (antibiotic resistance) K19349 vga; pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
D SCA_0367 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D SCA_1768 modA; molybdate-binding protein ModA K02020 modA; molybdate transport system substrate-binding protein
D SCA_1767 modB; molybdenum transport system permease protein ModB K02018 modB; molybdate transport system permease protein
D SCA_1766 modC; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D SCA_0876 hypothetical protein, similar to ABC transporter, binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SCA_2241 putative ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D SCA_2240 putative ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SCA_0875 putative ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D SCA_2242 putative ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SCA_0874 putative ABC transporter nucleotide-binding domain K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D SCA_0728 potD; putative spermidine/putrescine-binding protein precursor PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SCA_0727 potC; putative spermidine/putrescine transport system permease PotC K11070 potC; spermidine/putrescine transport system permease protein
D SCA_0726 potB; putative spermidine/putrescine transport system permease protein potB K11071 potB; spermidine/putrescine transport system permease protein
D SCA_0725 potA; putative spermidine/putrescine import ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SCA_0370 opuAC; putative substrate binding component of ABC-type glycine betaine transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D SCA_1932 opuCC; putative glycine betaine/carnitine/choline ABC transporter (osmoprotec) opuCC K05845 opuC; osmoprotectant transport system substrate-binding protein
D SCA_1931 opuCD; putative glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SCA_1933 opuCB; putative glycine betaine/carnitine/choline transport system permease protein K05846 opuBD; osmoprotectant transport system permease protein
D SCA_0369 opuBA; putative ATPase component of ABC-type proline/glycine betaine transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SCA_1934 opuCA; putative glycine betaine/carnitine/choline ABC transporter (ATP-bindin) opuCA K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SCA_1939 conserved hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D SCA_1940 putative ABC transporter ATP-binding protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D SCA_1034 putative phosphate transport system substrate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SCA_1033 putative ABC transporter permease protein K02037 pstC; phosphate transport system permease protein
D SCA_1032 pstA; putative phosphate ABC transporter permease protein K02038 pstA; phosphate transport system permease protein
D SCA_1031 pstB; putative phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SCA_1910 conserved hypothetical protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SCA_1909 hypothetical protein K10009 tcyB; L-cystine transport system permease protein
D SCA_1908 putative ABC transporter K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SCA_1432 conserved hypothetical protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D SCA_1431 glnQ; glutamate ABC transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SCA_2189 hypothetical protein, similar to lactococcal lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_0342 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_0457 putative lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_1512 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_1513 hypothetical protein K02073 metQ; D-methionine transport system substrate-binding protein
D SCA_2190 putative ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SCA_0456 putative ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SCA_2191 putative ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SCA_0455 ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SCA_0592 oppA; putative peptide binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SCA_0588 oppB; oligopeptide transport system permease protein homolog OppB K15581 oppB; oligopeptide transport system permease protein
D SCA_0589 oppC; putative oligopeptide transport system permease protein OppC K15582 oppC; oligopeptide transport system permease protein
D SCA_0590 oppD; oligopeptide transport system ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SCA_0591 oppF; oligopeptide transport system ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SCA_0936 appA; putative oligopeptide-binding protein AppA (Precursor) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SCA_1027 truncated putative extracellular solute-binding lipoprotein (fragment 1) K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D SCA_1025 opp-2B; putative oligopeptide transporter membrane permease domain, Opp-2B K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SCA_0939 appB; putative oligopeptide transport system permease protein AppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D SCA_1024 opp-2C; putative oligopeptide transporter membrane permease domain, Opp-2c K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SCA_0940 appC; putative oligopeptide transport system permease protein AppC K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D SCA_0937 appD'; truncated oligopeptide transport ATP-binding protein appD K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SCA_1023 opp-2D; putative oligopeptide transporter ATPase domain, Opp-2D K02031 ddpD; peptide/nickel transport system ATP-binding protein
D SCA_0938 appF; putative oligopeptide transport system ATP-binding protein AppF K02032 ddpF; peptide/nickel transport system ATP-binding protein
D SCA_1680 fecB; putative ferrichrome ABC transporter (binding protein) K23181 fecB; ferric citrate transport system substrate-binding protein
D SCA_0870 putative ABC transporter siderophore binding protein K23181 fecB; ferric citrate transport system substrate-binding protein
D SCA_0964 similar to transport system binding proteins K23181 fecB; ferric citrate transport system substrate-binding protein
D SCA_1678 putative FecCD transport family protein K23182 fecD; ferric citrate transport system permease protein
D SCA_1679 putative FecCD transport family protein K23183 fecC; ferric citrate transport system permease protein
D SCA_1778 putative ferrichrome binding protein precursor K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D SCA_0296 fhuB; ferrichrome transport permease K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D SCA_0297 fhuG; ferrichrome transport permease K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D SCA_0295 fhuC; ferrichrome transport ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D SCA_0384 sstD; homolog of lipoprotein SstD K25282 yclQ; iron-siderophore transport system substrate-binding protein
D SCA_0382 sstB; homolog of FecCD transport family protein SstB K25283 yclO; iron-siderophore transport system permease protein
D SCA_0381 sstA; homolog of FecCD transport family protein SstA K25284 yclN; iron-siderophore transport system permease protein
D SCA_0383 sstC; homolog of ABC transporter ATP-binding protein SstC K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D SCA_0260 putative lipoprotein involved in iron transport K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D SCA_0261 FecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D SCA_0273 putative lipoprotein, AdhesinB family protein K19975 mntC; manganese transport system substrate-binding protein
D SCA_0274 putative ABC transporter, permease component K19976 mntB; manganese transport system permease protein
D SCA_0275 putative ABC transporter ATP-binding protein K19973 mntA; manganese transport system ATP-binding protein [EC:7.2.2.5]
D SCA_1971 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein
D SCA_1176 mreB; putative ABC transporter permease protein MreB K09816 znuB; zinc transport system permease protein
D SCA_1177 mreA; putative ABC transporter, ATPase component MreA K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SCA_2225 bioY; putative biotin synthase K03523 bioY; biotin transport system substrate-specific component
D SCA_1775 conserved hypothetical protein K03523 bioY; biotin transport system substrate-specific component
D SCA_1705 conserved hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein
D SCA_0698 putative cobalt transport system permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D SCA_1707 conserved hypothetical protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SCA_1706 conserved hypothetical protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SCA_0699 putative ABC-type cobalt transport system,ATPase component K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SCA_0700 putative membrane protein K16925 ykoE; energy-coupling factor transport system permease protein
D SCA_0287 tagG; teichoic acid translocation permease protein K09692 tagG; teichoic acid transport system permease protein
D SCA_1443 conserved hypothetical protein K09692 tagG; teichoic acid transport system permease protein
D SCA_0286 tagH; teichoic acid translocation ATP-binding protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D SCA_1444 conserved hypothetical protein K09693 tagH; teichoic acid transport system ATP-binding protein [EC:7.5.2.4]
D SCA_1862 conserved hypothetical protein K09813 hrtB; hemin transport system permease protein
D SCA_1861 putative ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-]
D SCA_2116 putative ABC transporter membrane-spanning protein K25149 narB; polyether ionophore transport system permease protein
D SCA_2117 putative ABC transporter ATP-binding protein K25150 narA; polyether ionophore transport system ATP-binding protein
D SCA_0305 putative ABC transporter permease K19080 vraG; cationic antimicrobial peptide transport system permease protein
D SCA_0304 putative ABC transporter ATP-binding protein K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SCA_1410 ecsB; putative ABC transporter ecsB K25157 ecsB; ABC-2 type transport system permease protein
D SCA_1411 ecsA; ABC transporter ecsA K25158 ecsA; ABC-2 type transport system ATP-binding protein
D SCA_1836 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SCA_1504 conserved hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SCA_2096 putative ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D SCA_1837 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCA_1963 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCA_1507 conserved hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCA_2097 putative ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCA_1505 conserved hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCA_0138 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SCA_1995 putative permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SCA_1996 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SCA_0458 putative ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SCA_1495 truncated putative ArsB/NhaD permease (fragment 1) K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D SCA_2433 conserved hypothetical protein K18908 mepA; MATE family, multidrug efflux pump
D SCA_0231 proP; proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D SCA_1960 putative glucarate transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter
D SCA_2047 putative truncated permease (fragment 2) K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D SCA_2048 putative truncated permease (fragment 1) K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D SCA_1820 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D SCA_1887 narT; nitrate transporter K10850 narT; MFS transporter, NNP family, putative nitrate transporter
D SCA_1857 tcaB; TcaB protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SCA_1916 conserved hypothetical protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D SCA_0341 norA; quinolone resistance protein NorA K19576 norA; MFS transporter, DHA1 family, quinolone resistance protein
D SCA_1938 hypothetical protein K18567 pbuE; MFS transporter, DHA1 family, purine base/nucleoside efflux pump
D SCA_0170 putative sugar transport protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D SCA_1683 conserved hypothetical protein K23448 sfaA; MFS transporter, DHA1 family, staphyloferrin A biosynthesis exporter
D SCA_0586 putative permease of the major facilitator superfamily K08152 lmrP; MFS transporter, DHA1 family, multidrug resistance protein B
D SCA_1922 putative integral membrane efflux protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D SCA_1667 conserved hypothetical protein K18934 lmrS; MFS transporter, DHA2 family, multidrug resistance protein
D SCA_1669 conserved hypothetical protein K18935 sdrM; MFS transporter, DHA2 family, multidrug resistance protein
D SCA_2216 hypothetical protein K18936 mdeA; MFS transporter, DHA2 family, multidrug resistance protein
D SCA_0909 putative membrane protein K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D SCA_0705 ptsI; phosphoenolpyruvate-protein phosphatase (phosphotransferase system enzyme I) K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SCA_0704 ptsH; phosphocarrier protein HPR K02784 ptsH; phosphocarrier protein HPr
D SCA_1066 crr; PTS system, glucose-specific IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D SCA_0999 glcA; glucose-specific phosphotransferase system enzyme II, factor IIA K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SCA_1000 glcB; glucose-specific phosphotransferase system enzym II, factor IIB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D SCA_1332 putative PTS system IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D SCA_2138 putative PTS system, IIBC components K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SCA_0348 fruA; putative fructose specific permease K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SCA_1660 mtlF; PTS system, mannitol-specific IIA component K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SCA_1658 mtlA; PTS system, mannitol-specific IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SCA_0667 lacF; putative lactose-specific enzyme IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SCA_0668 lacE; putative PTS system lactose-specific component IIBC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SCA_2322 putative sorbitol PTS, EIIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SCA_2321 putative sorbitol PTS, EIIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D SCA_2320 putative sorbitol PTS, EIIC K02783 srlA; glucitol/sorbitol PTS system EIIC component
D SCA_1696 hypothetical protein K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SCA_2440 fruA; putative fructose phosphotransferase system enzyme fruA K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191]
D SCA_2111 conserved hypothetical protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D SCA_0948 glpF; glycerol uptake facilitator K02440 glpF; glycerol uptake facilitator
D SCA_0989 mscL; putative large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D SCA_0016 putative membrane protein with mechanosensitive ion channel domain K22044 ybiO; moderate conductance mechanosensitive channel
D SCA_0610 putative divalent cation transporter K06213 mgtE; magnesium transporter
D SCA_1779 conserved hypothetical protein K08717 utp; urea transporter
D SCA_1848 conserved hypothetical protein K03284 corA; magnesium transporter
D SCA_1875 conserved hypothetical protein K03284 corA; magnesium transporter
D SCA_2395 putative CorA-like Mg2+ transporter protein K03284 corA; magnesium transporter
D SCA_1383 hypothetical protein K06199 crcB; fluoride exporter
D SCA_1384 hypothetical protein K06199 crcB; fluoride exporter
D SCA_0349 predicted membrane protein with CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SCA_0523 conserved hypothetical protein, truncated K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SCA_2192 putative glycine-rich cell wall surface anchor protein K21449 ata; trimeric autotransporter adhesin
D SCA_1925 lrgA; putative holin-like protein LrgA K05338 lrgA; holin-like protein
D SCA_1993 conserved hypothetical protein K06518 cidA; holin-like protein
D SCA_1968 lacP; lactose permease K11104 melB; melibiose permease
D SCA_1287 lysP; lysine-specific permease K11733 lysP; lysine-specific permease
D SCA_2120 putative amino acid transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D SCA_1302 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D SCA_1918 putative amino acid permease K11737 cycA; D-serine/D-alanine/glycine transporter
D SCA_2084 arcD; putative arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D SCA_2007 putative cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D SCA_1652 czrB; putative cation-efflux system membrane protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D SCA_1795 hypothetical protein K18924 ykkC; paired small multidrug resistance pump
D SCA_1796 hypothetical protein K18925 ykkD; paired small multidrug resistance pump
D SCA_1742 glcU; glucose uptake protein K05340 glcU; glucose uptake protein
D SCA_2421 putative sugar transport protein K06216 rbsU; putative ribose uptake protein
D SCA_1078 putative membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D SCA_0268 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D SCA_1835 conserved hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D SCA_0548 putative permease K07084 yuiF; putative amino acid transporter
D SCA_1948 gntP; putative gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D SCA_2208 putative anaerobic C4-dicarboxylate membrane transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D SCA_1867 putative L-lactate permease lctP K03303 lutP; lactate permease
D SCA_0990 opuD; glycine betaine transporter opuD K05020 opuD; glycine betaine transporter
D SCA_1688 opuD2; glycine betaine transporter opuD K05020 opuD; glycine betaine transporter
D SCA_2310 opuD; opuD-like protein, glycine betaine transporter K05020 opuD; glycine betaine transporter
D SCA_1474 putP; high affinity proline permease K11928 putP; sodium/proline symporter
D SCA_2260 putP; high affinity proline permease K11928 putP; sodium/proline symporter
D SCA_1878 gltT; putative proton/sodium-glutamate symport protein K11102 gltP; proton glutamate symport protein
D SCA_1792 putative Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D SCA_2258 nhaC; Na+/H+ antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D SCA_0272 sodium/hydrogen exchanger family protein K24163 nhaK; monovalent cation/hydrogen antiporter
D SCA_0441 putative cation transport protein of TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D SCA_0626 putative sodium transport protein K03498 trkH; trk/ktr system potassium uptake protein
D SCA_0709 TrkA_N, TrkA_C-family protein K03499 trkA; trk/ktr system potassium uptake protein
D SCA_2061 putative allantoin permease K10975 allP; allantoin permease
D SCA_0813 pyrP; uracil permease K02824 uraA; uracil permease
D SCA_0048 pbuX; putative xanthine permease K16169 pbuX; xanthine permease
D SCA_1739 conserved hypothetical protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D SCA_0177 nupC; pyrimidine nucleoside transport protein K11535 nupC; nucleoside transport protein
D SCA_0293 putative sodium dependent nucleoside transporter K16323 yxjA; purine nucleoside transport protein
D SCA_1826 putative sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D SCA_0731 putative divalent cation transport protein K03322 mntH; manganese transport protein
D SCA_0671 arsB; arsenic efflux pump protein K03893 arsB; arsenical pump membrane protein
D SCA_2129 putative NADH dehydrogenase I chain L K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D SCA_0557 mnhA; putative Na+/H+ antiporter subunit K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D SCA_2128 putative Na(+)/H(+) antiporter subunit B K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D SCA_0556 mnhB; putative Na+/H+ antiporter subunit K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D SCA_2127 putative Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D SCA_0555 mnhC; putative Na+/H+ antiporter subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D SCA_2126 MnhD, putative Na(+)/H(+) antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D SCA_0554 mnhD; putative Na+/H+-antiporter subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D SCA_2125 putative Na(+)/H(+) antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D SCA_0553 mnhE; putative Na+/H+ antiporter subunit K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D SCA_2124 putative Na(+)/H(+) antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D SCA_0552 mnhF; putative Na+/H+ antiporter subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D SCA_2123 putative Na(+)/H(+) antiporter subunit G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D SCA_0551 mnhG; putative Na+/H+ antiporter subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D SCA_1744 conserved hypothetical protein K24180 mleP; malate permease and related proteins
D SCA_0088 putative LysE type translocator K06895 lysE; L-lysine exporter family protein LysE/ArgO
D SCA_0253 putative LysE type translocator protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D SCA_1988 hypothetical protein K26605 azlC; branched chain amino acid efflux pump
D SCA_1987 alzD; putative branched-chain amino acid transport protein K26606 azlD; branched chain amino acid efflux pump
D SCA_1116 putative membrane protein K23675 fmnP; riboflavin transporter
D SCA_1074 putative membrane protein K09125 yhhQ; queuosine precursor transporter
D SCA_0739 putative cell division protein K03588 ftsW; cell division protein FtsW
D SCA_1886 putative cell division protein K03588 ftsW; cell division protein FtsW
D SCA_2213 conserved hypothetical protein K07243 FTR; high-affinity iron transporter
D SCA_2215 conserved hypothetical protein K07224 efeO; iron uptake system component EfeO
D SCA_2214 putative Tat-translocated protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D SCA_0421 hypothetical protein K03646 tolA; colicin import membrane protein
D SCA_1894 narG; respiratory nitrate reductase alpha chain K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D SCA_1893 narH; nitrate reductase beta chain K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D SCA_1891 narI; NarI protein K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D SCA_2356 capB; capsular polysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D SCA_2357 capA; putative capsular polysaccharide synthesis enzyme Cap5A K19420 epsA; protein tyrosine kinase modulator
D SCA_2028 hypothetical protein K04758 feoA; ferrous iron transport protein A
D SCA_2029 feoB; putative ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D SCA_2229 hypothetical protein K05770 TSPO; translocator protein
D SCA_1662 conserved hypothetical protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:sca02044]
D SCA_0803 putative membrane protein K02221 yggT; YggT family protein
D SCA_1212 hypothetical protein, similar to late competence operon protein ComEA K02237 comEA; competence protein ComEA
D SCA_1211 putative deaminase similar to ComEB K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SCA_1210 truncated protein, similar to ComEC late competence protein 3 (fragment 1) K02238 comEC; competence protein ComEC
D SCA_1209 truncated protein, similar to ComEC late competence protein 3 (fragment 2) K02238 comEC; competence protein ComEC
D SCA_0398 putative ATP-dependent helicase K02240 comFA; competence protein ComFA
D SCA_0399 putative amidophosphoribosyltransferase K02242 comFC; competence protein ComFC
D SCA_1166 similar to type II secretion system protein E K02243 comGA; competence protein ComGA
D SCA_1165 similar to type II secretion system protein pulF K02244 comGB; competence protein ComGB
D SCA_1164 similar to general secretion pathway protein G K02245 comGC; competence protein ComGC
D SCA_1163 putative exported protein K02246 comGD; competence protein ComGD
D SCA_1265 conserved hypothetical protein K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SCA_0642 putative ComK family protein K02250 comK; competence protein ComK
D SCA_2197 putative preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCA_0401 secA; preprotein translocase secA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SCA_1248 secDF; putative protein-export membrane protein SecDF K12257 secDF; SecD/SecF fusion protein
D SCA_0191 secE; (P36253) Preprotein translocase secE subunit,InterPro: Protein secE/sec61-gamma protein; Hypothetical protein; Sca_0191 K03073 secE; preprotein translocase subunit SecE
D SCA_0430 secG; putative preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SCA_2201 putative preprotein translocase secY subunit K03076 secY; preprotein translocase subunit SecY
D SCA_1715 secY; preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D SCA_0860 ffh'; truncated signal recognition particle homolog (fragment 1) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SCA_0861 ffh''; truncated signal recognition particle homolog (fragment 2) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SCA_0858 ftsY; putative cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SCA_1249 conserved hypothetical protein K03210 yajC; preprotein translocase subunit YajC
D SCA_1592 conserved hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCA_2248 putative lipoprotein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SCA_2200 conserved hypothetical protein K12268 asp1; accessory secretory protein Asp1
D SCA_2199 conserved hypothetical protein K12269 asp2; accessory secretory protein Asp2
D SCA_2198 hypothetical protein K12270 asp3; accessory secretory protein Asp3
D SCA_2211A tatA; putative sec-independent protein translocase K03116 tatA; sec-independent protein translocase protein TatA
D SCA_2212 tatC; putative sec-independant protein translocase K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:sca02042]
D SCA_2302 hypothetical protein K11041 eta; exfoliative toxin A/B
D SCA_0349 predicted membrane protein with CBS domains K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SCA_0523 conserved hypothetical protein, truncated K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SCA_1670 putative hemolysin III K11068 hlyIII; hemolysin III
D SCA_0905 set; exotoxin-like protein K23587 ssl5_11; superantigen-like protein 5/11
C 02022 Two-component system [BR:sca02022]
D SCA_1298 phoR; putative alkaline phosphatase synthesis sensor protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D SCA_1299 phoP; alkaline phosphatase synthesis transcriptional regulatory protein K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D SCA_1117 srrB; staphylococcal respiratory response protein SrrB K07651 resE; two-component system, OmpR family, sensor histidine kinase ResE [EC:2.7.13.3]
D SCA_1118 srrA; staphylococcal respiratory response regulator receiver SrrA K07775 resD; two-component system, OmpR family, response regulator ResD
D SCA_2455 two-component sensor histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SCA_2456 vicR; putative response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D SCA_0353 saeS; histidine protein kinase SaeS K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D SCA_0352 saeR'; truncated response regulator saeR (fragment 1) K10682 saeR; two-component system, OmpR family, response regulator SaeR
D SCA_0303 putative two-component sensor histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SCA_0302 putative response regulator protein K19078 graR; two-component system, OmpR family, response regulator protein GraR
D SCA_1059 putative sensor protein histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D SCA_1060 putative response regulator protein K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SCA_1864 conserved hypothetical protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D SCA_1863 conserved hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D SCA_1459 vraS; histidine kinase sensor K07681 vraS; two-component system, NarL family, vancomycin resistance sensor histidine kinase VraS [EC:2.7.13.3]
D SCA_1458 vraR; putative response regulator K07694 vraR; two-component system, NarL family, vancomycin resistance associated response regulator VraR
D SCA_1889 nreB; NreB protein K07683 nreB; two-component system, NarL family, sensor histidine kinase NreB [EC:2.7.13.3]
D SCA_1888 nreC; response regulator of the two-component regulatory K07696 nreC; two-component system, NarL family, response regulator NreC
D SCA_1424 putative two-component sensor histidine kinase K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D SCA_1423 putative two-component response regulator K02479 K02479; two-component system, NarL family, response regulator
D SCA_1923 lytS; two-component sensor histidine kinase K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SCA_1924 lytR; two-component response regulator K07705 lytT; two-component system, LytTR family, response regulator LytT
D SCA_1547 agrC; autoinducer sensor protein AgrC, probably truncated K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SCA_1549 agrA; Accessory gene regulator protein A K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SCA_2368 conserved hypothetical protein, similar to two-component sensor histidine kinase K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D SCA_2367 putative two-component system response regulator K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:sca02035]
D SCA_1910 conserved hypothetical protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:sca04812]
D SCA_0799 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SCA_0798 ftsA; putative cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SCA_0006 putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SCA_0015 putative DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:sca04147]
D SCA_2144 fda; fructose-bisphosphate aldolase class I K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D SCA_0428 eno; 2-phospho-D-glycerate hydrolase (enolase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SCA_0424 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SCA_0425 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SCA_1303 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SCA_1540 groEL; GroEL protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SCA_1202 dnaK; chaperone protein DnaK (Hsp70) K04043 dnaK; molecular chaperone DnaK
D SCA_0570 pgiA; glucose-6-phosphate isomerase A K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SCA_0049 guaB; putative inositol-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SCA_0207 tufA; translational elongation factor TU K02358 tuf; elongation factor Tu
D SCA_1412 hit; hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SCA_1369 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCA_0343 ldh; putative L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SCA_2407 fadE; putative acid-CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SCA_2089 vraA; putative Co-A ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D SCA_1884 thiL; putative acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_2088 vraB; putative acetyl-CoA c-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D SCA_1714 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SCA_1246 apt; adenine phosphoribosyl transferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SCA_0568 argH; putative argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SCA_0569 argG; putative argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SCA_2446 conserved hypothetical protein K01593 DDC; aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:4.1.1.28 4.1.1.105]
D SCA_1771 galK; galactokinase GalK K00849 galK; galactokinase [EC:2.7.1.6]
D SCA_0949 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D SCA_0957 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_2364 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SCA_1274 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D SCA_1330 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SCA_0695 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase purH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SCA_0722 pdhD; dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1140 bfmBC; putative E3 component of branched-chain alpha-keto acid dehydrogenase complex K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SCA_1130 zwf; putative glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D SCA_0426 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SCA_1912 putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_0032 gpm3; putative phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SCA_1698 hypothetical protein K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:sca02048]
D SCA_1317 conserved hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SCA_2450 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D SCA_2324 putative restriction enzyme K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D SCA_0023 pemK; putative cell growth inhibitor, pemK-like protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SCA_1574 conserved hypothetical protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SCA_1575 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D SCA_0256 conserved hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D SCA_0934 hypothetical protein K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D SCA_0255 conserved hypothetical protein K19159 yefM; antitoxin YefM
D SCA_0799 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SCA_0996 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SCA_0995 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SCA_1234 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1322 conserved hypothetical protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SCA_1401 nifS; putative Cysteine desulfurase/aminotransferase,class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:sca04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:sca01504]
D SCA_0057 vba; ABC transporter ATP-binding protein (antibiotic resistance) K19349 vga; pleuromutilin/lincosamide/streptogramin A transport system ATP-binding/permease protein
D SCA_1643 hypothetical protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SCA_0333 MarR family regulatory protein K18906 mgrA; MarR family transcriptional regulator, multiple gene regulator MgrA
D SCA_0303 putative two-component sensor histidine kinase K19077 graS; two-component system, OmpR family, sensor histidine kinase GraS [EC:2.7.13.3]
D SCA_0302 putative response regulator protein K19078 graR; two-component system, OmpR family, response regulator protein GraR
D SCA_0534 dltA; D-alanine-D-alanyl carrier protein ligase K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SCA_0535 dltB; DltB membrane protein K03739 dltB; membrane protein involved in D-alanine export
D SCA_0536 dltC; D-alanyl carrier protein K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SCA_0537 dltD; poly D-alanine transfer protein K03740 dltD; D-alanine transfer protein
D SCA_1002 fmtC; oxacillin resistance-related FmtC protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3]
D SCA_0304 putative ABC transporter ATP-binding protein K19079 vraF; cationic antimicrobial peptide transport system ATP-binding protein
D SCA_0305 putative ABC transporter permease K19080 vraG; cationic antimicrobial peptide transport system permease protein
D SCA_0292 ATP-binding cassette transporter A K18104 abcA; ATP-binding cassette, subfamily B, bacterial AbcA/BmrA [EC:7.6.2.2]
D SCA_1922 putative integral membrane efflux protein K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D SCA_1874 putative transcriptional regulator K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D SCA_2432 MarR family regulatory protein K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D SCA_2433 conserved hypothetical protein K18908 mepA; MATE family, multidrug efflux pump
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:sca03100]
D SCA_t0009 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCA_t0037 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCA_t0046 tRNA-Ala_(TGC); tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SCA_t0013 tRNA-Arg_(TCT); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCA_t0007 tRNA-Arg_(ACG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCA_t0039 tRNA-Arg_(ACG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCA_t0010 tRNA-Arg_(CCG); tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SCA_t0012 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCA_t0016 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCA_t0055 tRNA-Asn_(GTT); tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SCA_t0020 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCA_t0032 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCA_t0059 tRNA-Asp_(GTC); tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SCA_t0025 tRNA-Cys_(GCA); tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SCA_t0026 tRNA-Gln_(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCA_t0051 tRNA-Gln_(TTG); tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SCA_t0060 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SCA_t0015 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SCA_t0054 tRNA-Glu_(TTC); tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SCA_t0017 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0048 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0005 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0041 tRNA-Gly_(GCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0023 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0024 tRNA-Gly_(TCC); tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SCA_t0018 tRNA-His_(GTG); tRNA-His K14226 tRNA-His; tRNA His
D SCA_t0027 tRNA-His_(GTG); tRNA-His K14226 tRNA-His; tRNA His
D SCA_t0047 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SCA_t0056 tRNA-Ile_(GAT); tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SCA_t0049 tRNA-Leu_(GAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0006 tRNA-Leu_(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0040 tRNA-Leu_(TAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0022 tRNA-Leu_(CAA); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0042 tRNA-Leu_(TAG); tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SCA_t0043 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCA_t0004 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCA_t0050 tRNA-Lys_(TTT); tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SCA_t0021 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D SCA_t0033 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D SCA_t0035 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D SCA_t0036 tRNA-Met_(CAT); tRNA-Met K14230 tRNA-Met; tRNA Met
D SCA_t0019 tRNA-Phe_(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SCA_t0031 tRNA-Phe_(GAA); tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SCA_t0038 tRNA-Pro_(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SCA_t0008 tRNA-Pro_(TGG); tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SCA_t0011 tRNA-Ser_(GCT); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0001 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0034 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0057 tRNA-Ser_(TGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0014 tRNA-Ser_(GGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0058 tRNA-Ser_(CGA); tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SCA_t0003 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCA_t0030 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCA_t0044 tRNA-Thr_(TGT); tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SCA_t0028 tRNA-Trp_(CCA); tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SCA_t0029 tRNA-Tyr_(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SCA_t0052 tRNA-Tyr_(GTA); tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SCA_t0002 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D SCA_t0045 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D SCA_t0053 tRNA-Val_(TAC); tRNA-Val K14237 tRNA-Val; tRNA Val
D SCA_16S_rRNA_D 16S_rRNA_D; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_E 16S_rRNA_E; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_A 16S_rRNA_A; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_C 16S_rRNA_C; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_16S_rRNA_B 16S_rRNA_B; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SCA_23S_rRNA_B 23S_rRNA_B; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_D 23S_rRNA_D; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_C 23S_rRNA_C; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_A 23S_rRNA_A; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_23S_rRNA_E 23S_rRNA_E; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SCA_5S_rRNA_A 5S_rRNA_A; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_E 5S_rRNA_E; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_B2 5S_rRNA_B2; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_B 5S_rRNA_B; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SCA_5S_rRNA_C 5S_rRNA_C; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NEW_REGION_507 NEW_REGION_507 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SCA_0090 putative 3-hydroxyacyl-CoA dehydrogenase K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D SCA_2417 gutB; putative zinc-binding dehydrogenase K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D SCA_1793 putative D-octopine dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D SCA_1690 putative zinc-binding dehydrogenase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D SCA_1692 putative NADP-dependent oxidoreductase K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D SCA_2006 putative phosphodiesterase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D SCA_0578 cdr; coenzyme A disulfide reductase K08255 cdr; CoA-disulfide reductase [EC:1.8.1.14]
D SCA_0038 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D SCA_1111 putative pyridine nucleotide-disulfide reductase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D SCA_2286 putative peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SCA_1005 msrA; putative peptide methionine sulfoxide reductase I K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SCA_1068 putative peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SCA_1067 putative peptide methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D SCA_0638 putative hydrolase of alpha/beta fold family K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D SCA_1436 putative bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SCA_1318 putative thioredoxin peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SCA_0039 ahpC; alkyl hydroperoxide reductase subunit C K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D SCA_0683 putative flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D SCA_1872 conserved hypothetical protein K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SCA_0670 arsC; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D SCA_1844 nrdG; putative anaerobic ribonucleotide reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SCA_2016 pflA; formate acetyltransferase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SCA_1079 putative RNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D SCA_1591 paiA; putative regulatory protein PaiA K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SCA_0212 putative acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SCA_0280 maa; putative maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D SCA_0093 putative N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D SCA_0542 putative acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D SCA_1339 acuA; acetoin utilization protein K04766 acuA; acetoin utilization protein AcuA [EC:2.3.1.-]
D SCA_1092 putative glycosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D SCA_0410 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SCA_0847 predicted kinase related to dihydroxyacetone kinase family K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SCA_1693 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SCA_1185 conserved hypothetical protein in Sigma70 operon K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D SCA_2008 conserved hypothetical protein K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D SCA_0394 putative membrane protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D SCA_1665 conserved hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D SCA_1671 conserved hypothetical protein K11442 K11442; putative uridylyltransferase [EC:2.7.7.-]
D SCA_2153 hypothetical protein K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20]
D SCA_0409 hprK; HPr kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SCA_0180 putative phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D SCA_0083 putative esterase/lipase K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D SCA_0431 est; carboxylesterase precursor K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D SCA_0665 similar to autolysis and methicillin resistant-related protein fmt K22580 fmtA; teichoic acid D-alanine hydrolase [EC:3.1.1.103]
D SCA_1937 putative para-nitrobenzyl esterase chain A K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D SCA_1930 putative esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D SCA_0089 putative thioesterase K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33]
D SCA_1849 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SCA_0992 putative thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SCA_0066 fcbC; putative thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SCA_2355 capC; (P96717) Putative protein-tyrosine phosphatase ywqE (EC 3.1.3.48),InterPro: PHP domain C-terminal region; Conserved hypothetical protein; Sca_2355 K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D SCA_0832 capC; putative phosphotyrosine-protein phosphatase (capsular polysaccharide biosynthesis) K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D SCA_0824 capC; putative tyrosine-protein phosphatase capC K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D SCA_1220 conserved hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D SCA_2462 conserved hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D SCA_0141 putative TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SCA_0142 putative Primase-related protein (Toprim domain) K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D SCA_0025 nuc; thermonuclease precursor K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D SCA_0963 nuc; thermonuclease NucH/NucI K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D SCA_0095 putative autolysin with LysM domain K22409 sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SCA_0835 def; putative polypeptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SCA_0717 pdf; type II peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SCA_0229 putative LmbE-like protein family protein K22135 bshB2; N-acetylglucosamine malate deacetylase 2 [EC:3.5.1.-]
D SCA_0147 putative purine regulatory protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SCA_1618 conserved hypothetical protein K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D SCA_1405 conserved hypothetical protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D SCA_0567 putative amidohydrolase K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D SCA_2226 hypothetical protein K22213 PATG; 6-methylsalicylate decarboxylase [EC:4.1.1.52]
D SCA_2166 putative indole-3-pyruvate decarboxylase K27601 kdcA; branched-chain-2-oxoacid decarboxylase [EC:4.1.1.72]
D SCA_2468 conserved hypothetical protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D SCA_1636 putative bifunctional protein K27344 ldmS; L-aspartate-L-methionine ligase [EC:6.3.2.-]
D SCA_0538 putative cation exporting ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D SCA_1340 acuC; putative acetoin utilization protein K04768 acuC; acetoin utilization protein AcuC
D SCA_0790 conserved hypothetical protein K22136 bshC; bacillithiol synthase
C 99982 Energy metabolism
D SCA_1773 conserved hypothetical protein K02379 fdhD; FdhD protein
D SCA_2052 fdrA; putative acyl-CoA synthetase K02381 fdrA; FdrA protein
D SCA_1115 ferredoxin K05337 fer; ferredoxin
D SCA_0461 NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D SCA_1053 conserved hypothetical protein K04748 norQ; nitric oxide reductase NorQ protein
D SCA_0628 putative pyridine nucleotide-disulfide oxidoreductase K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D SCA_1069 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D SCA_0397 conserved hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D SCA_0378 nrdI; NrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D SCA_2366 conserved hypothetical protein K04023 eutH; ethanolamine transporter
D SCA_0801 Predicted enzyme with a TIM-barrel fold K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D SCA_2185 hypothetical protein K21462 icaC; probable poly-beta-1,6-N-acetyl-D-glucosamine export protein
D SCA_2182 hypothetical protein K21462 icaC; probable poly-beta-1,6-N-acetyl-D-glucosamine export protein
C 99987 Cofactor metabolism
D SCA_1760 mobB; MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D SCA_2265 putative aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
D SCA_2067 hypothetical protein K22390 ACP7; acid phosphatase type 7
D SCA_1969 putative glyoxylase family protein K15975 K15975; glyoxalase family protein
D SCA_0074 gloA; glyoxylase family protein K15975 K15975; glyoxalase family protein
D SCA_2298 putative dioxygenase K15975 K15975; glyoxalase family protein
D SCA_0075 putative phospholipase/carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D SCA_1072 conserved hypothetical protein K26958 brxA_B; bacilliredoxin
D SCA_1136 conserved hypothetical protein K26958 brxA_B; bacilliredoxin
D SCA_0389 conserved hypothetical protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SCA_2319 truncated ORF, similar to glucitol / sorbitol operon activator K02466 gutM; glucitol operon activator protein
D SCA_1045 csp; putative cold shock protein K03704 cspA; cold shock protein
D SCA_0437 csp; putative cold-shock protein K03704 cspA; cold shock protein
D SCA_0597 putative ArsC family protein K16509 spxA; regulatory protein spx
D SCA_1569 conserved hypothetical protein K06959 tex; protein Tex
C 99974 Translation
D SCA_0562 hypothetical protein with S1 RNA binding domain K07570 GSP13; general stress protein 13
D SCA_0159 putative RNA binding protein with S1 domain K07571 K07571; S1 RNA binding domain protein
C 99975 Protein processing
D SCA_0179 Hypothetical protein K19411 mcsA; protein arginine kinase activator
D SCA_1281 tig; trigger factor K03545 tig; trigger factor
D SCA_1783 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D SCA_1784 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein
D SCA_1785 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D SCA_1786 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein
D SCA_0433 smpB; putative tmRNA-binding protein SmpB K03664 smpB; SsrA-binding protein
D SCA_0598 putative MecA family protein K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D SCA_1264 radC; putative DNA repair protein RadC K03630 radC; DNA repair protein RadC
D SCA_2325 hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D SCA_0129 putative nuclease K07461 K07461; putative endonuclease
D SCA_1087 dnaD; DNA replication protein DnaD K02086 dnaD; DNA replication protein
D SCA_0453 TOPRIM domain containing protein K07476 yusF; toprim domain protein
D SCA_1239 conserved hypothetical protein K07478 ycaJ; putative ATPase
D SCA_1530 conserved hypothetical protein K06919 K06919; putative DNA primase/helicase
D SCA_1387 tnp''; truncated transposase (fragment 2) K07485 K07485; transposase
D SCA_1656 putative transposase K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D SCA_0120 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SCA_1812 putative amino acid transporter K03293 TC.AAT; amino acid transporter, AAT family
D SCA_0975 putative amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D SCA_2105 putative amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SCA_1749 conserved hypothetical protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D SCA_2361 citH; citrat transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D SCA_2165 cudT; choline transporter K03451 TC.BCT; betaine/carnitine transporter, BCCT family
D SCA_0374 putative proton-dependent oligopeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SCA_0375 putative di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D SCA_0307 putative phosphate transporter protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D SCA_2388 solute:Na+ symporter protein, SSS family K03307 TC.SSS; solute:Na+ symporter, SSS family
D SCA_0085 putative sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D SCA_0997 putative amino acid carrier protein (sodium:alanine symporter family) K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SCA_0615 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SCA_1051 brnQ; putative branched-chain amino acid carrier K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D SCA_0418 putative branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D SCA_0354 scdA; cell division and morphogenesis-related protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D SCA_2042 conserved hypothetical protein K06351 kipI; inhibitor of KinA
D SCA_0364 putative allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA
D SCA_2014 hypothetical protein K06377 spo0M; sporulation-control protein
D SCA_0148 spoVG; stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
C 99993 Cell motility
C 99995 Signaling proteins
D SCA_0735 typA; putative GTP-binding protein family protein TypA K06207 typA; GTP-binding protein
D SCA_1193 phoH; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D SCA_1997 conserved hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D SCA_1277 hemX; hemA concentration negative effector K02497 hemX; HemX protein
D SCA_1858 tcaA; TcaA protein K21463 tcaA; membrane-associated protein TcaA
D SCA_2328 hypothetical protein K21463 tcaA; membrane-associated protein TcaA
C 99994 Others
D SCA_1030 putative phosphate uptake regulator protein (PhoU family) K02039 phoU; phosphate transport system protein
D SCA_0114 putative membrane protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SCA_0777 putative acetyltransferase K02348 elaA; ElaA protein
D SCA_1349 conserved hypothetical protein K06878 K06878; tRNA-binding protein
D SCA_0604 bacterial-like globin family protein K06886 glbN; hemoglobin
D SCA_1856 hypothetical protein K06994 K06994; putative drug exporter of the RND superfamily
D SCA_2151 putative antibiotic transport-associated protein K06994 K06994; putative drug exporter of the RND superfamily
D SCA_0099 putative esterase of the alpha-beta hydrolase superfamily K07001 K07001; NTE family protein
D SCA_2228 conserved hypothetical protein K07001 K07001; NTE family protein
D SCA_0788 putative haloacid dehalogenase-like hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D SCA_0262 haloacid dehalogenase-like hydrolase family protein K07025 K07025; putative hydrolase of the HAD superfamily
D SCA_0462 sufB; putative FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SCA_0459 conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D SCA_1672 conserved hypothetical protein K07038 K07038; inner membrane protein
D SCA_1442 conserved hypothetical protein K07038 K07038; inner membrane protein
D SCA_1456 hypothetical protein K07058 K07058; membrane protein
D SCA_2303 conserved hypothetical protein K07146 K07146; UPF0176 protein
D SCA_0776 Glyoxalase family protein K04750 phnB; PhnB protein
D SCA_1633 conserved hypothetical protein K04750 phnB; PhnB protein
D SCA_0442 putative lemA family protein K03744 lemA; LemA protein
D SCA_1568 conserved hypothetical protein K03095 sprL; SprT-like protein
D SCA_2429 hypothetical protein, similar to phage infection protein K01421 yhgE; putative membrane protein
D SCA_2271 hypothetical protein K01421 yhgE; putative membrane protein
D SCA_0743 putative membrane protein K08976 K08976; putative membrane protein
D SCA_1579 conserved hypothetical protein K08981 K08981; putative membrane protein
D SCA_2115 phnA; putative alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D SCA_0443 putative membrane protein K06872 K06872; uncharacterized protein
D SCA_1468 putative general stress protein K06884 K06884; uncharacterized protein
D SCA_0251 putative phosphohydrolase K06885 K06885; uncharacterized protein
D SCA_2170 conserved hypothetical protein K06889 K06889; uncharacterized protein
D SCA_0872 putative alpha/beta hydrolase superfamily protein K06889 K06889; uncharacterized protein
D SCA_0312 putative integral membrane protein that interacts with FtsH K06890 K06890; uncharacterized protein
D SCA_1590 conserved hypothetical protein K06950 K06950; uncharacterized protein
D SCA_0042 putative sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein
D SCA_0189 conserved hypothetical protein K06962 K06962; uncharacterized protein
D SCA_1094 putative membrane protein with neutral zinc metallopeptidase domain K06973 K06973; uncharacterized protein
D SCA_2299 hypothetical protein K06975 K06975; uncharacterized protein
D SCA_1972 conserved hypothetical protein K06975 K06975; uncharacterized protein
D SCA_2231 conserved hypothetical protein K06978 K06978; uncharacterized protein
D SCA_2290 hypothetical protein K07004 K07004; uncharacterized protein
D SCA_0906 putative member of glyoxalase/bleomycin resistance protein family K07032 K07032; uncharacterized protein
D SCA_2010 conserved hypothetical protein K07035 K07035; uncharacterized protein
D SCA_1433 conserved hypothetical protein K07035 K07035; uncharacterized protein
D SCA_2043 hypothetical protein K07035 K07035; uncharacterized protein
D SCA_0420 putative nucleoside-diphosphate sugar epimerase K07071 K07071; uncharacterized protein
D SCA_2339 hypothetical protein K07090 K07090; uncharacterized protein
D SCA_0062 putative permease K07090 K07090; uncharacterized protein
D SCA_1319 conserved hypothetical protein K07090 K07090; uncharacterized protein
D SCA_0526 putative membrane protein K07090 K07090; uncharacterized protein
D SCA_0772 truncated putative phosphoesterase (fragment 1) K07095 K07095; uncharacterized protein
D SCA_0773 truncated putative phosphoesterase (fragment 2) K07095 K07095; uncharacterized protein
D SCA_1400 conserved hypothetical protein K07105 K07105; uncharacterized protein
D SCA_1551 conserved hypothetical protein K07112 K07112; uncharacterized protein
D SCA_0831 Putative NADH-flavin reductase K07118 K07118; uncharacterized protein
D SCA_1272 conserved hypothetical protein K07120 K07120; uncharacterized protein
D SCA_0021 putative oxidoreductase K07124 K07124; uncharacterized protein
D SCA_1127 putative short chain dehydrogenase K07124 K07124; uncharacterized protein
D SCA_1367 conserved hypothetical protein K07139 K07139; uncharacterized protein
D SCA_1393 conserved hypothetical protein K08998 K08998; uncharacterized protein
D SCA_0319 conserved hypothetical protein K09145 K09145; uncharacterized protein
D SCA_1697 hypothetical protein K09155 K09155; uncharacterized protein
D SCA_1578 conserved hypothetical protein K09167 K09167; uncharacterized protein
D SCA_1580 conserved hypothetical protein K09167 K09167; uncharacterized protein
D SCA_0318 conserved hypothetical protein K09705 K09705; uncharacterized protein
D SCA_1122 hypothetical protein K09763 K09763; uncharacterized protein
D SCA_0328 conserved hypothetical protein K09768 K09768; uncharacterized protein
D SCA_0859 putative transcriptional regulator related to the SRP pathway K09787 K09787; uncharacterized protein
D SCA_0216 putative membrane protein K09790 K09790; uncharacterized protein
D SCA_0322 putative membrane protein K09793 K09793; uncharacterized protein
D SCA_1035 conserved hypothetical protein K00243 K00243; uncharacterized protein
D SCA_1794 hypothetical protein K09940 K09940; uncharacterized protein
D SCA_2314 hypothetical protein K09940 K09940; uncharacterized protein
D SCA_2140 conserved hypothetical protein K09963 K09963; uncharacterized protein
D SCA_0984 conserved hypothetical protein K09976 K09976; uncharacterized protein
D SCA_2045 conserved hypothetical protein K05937 K05937; uncharacterized protein
D SCA_1257 conserved hypothetical protein K07584 ysxB; uncharacterized protein
D SCA_0306 conserved hypothetical protein K07220 K07220; uncharacterized protein
D SCA_1440 conserved hypothetical protein K07586 ygaC; uncharacterized protein
D SCA_0902 conserved hypothetical protein K07742 ylxR; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 13, 2024