+C RNA KO
#
Non-coding RNAs - Salmonella enterica subsp. enterica serovar Newport SL254
%
!
ATransfer RNA
B SNSL254_A2603 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B SNSL254_A2604 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B SNSL254_A0274 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B SNSL254_A4269 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
B SNSL254_A0606 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A1367 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A1350 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A2823 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A4211 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A2583 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A3023 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A3025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A3026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A3024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
B SNSL254_A2167 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B SNSL254_A2170 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B SNSL254_A2184 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B SNSL254_A2182 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
B SNSL254_A0279 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B SNSL254_A4178 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B SNSL254_A0290 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
B SNSL254_A2106 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
B SNSL254_A0735 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B SNSL254_A0736 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B SNSL254_A0732 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B SNSL254_A0733 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
B SNSL254_A2873 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SNSL254_A4173 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SNSL254_A4512 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SNSL254_A3665 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SNSL254_A4465 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
B SNSL254_A4476 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SNSL254_A2107 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SNSL254_A4713 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SNSL254_A4715 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SNSL254_A4714 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SNSL254_A3271 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
B SNSL254_A4212 tRNA-His K14226 tRNA-His; tRNA His
B SNSL254_A0273 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B SNSL254_A4268 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
B SNSL254_A4835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SNSL254_A3551 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SNSL254_A0737 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SNSL254_A4213 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SNSL254_A4909 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SNSL254_A4911 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SNSL254_A4910 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SNSL254_A2105 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
B SNSL254_A0814 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SNSL254_A0818 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SNSL254_A0817 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SNSL254_A2611 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SNSL254_A0816 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SNSL254_A0819 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
B SNSL254_A0734 tRNA-Met K14230 tRNA-Met; tRNA Met
B SNSL254_A0738 tRNA-Met K14230 tRNA-Met; tRNA Met
B SNSL254_A3473 tRNA-Met K14230 tRNA-Met; tRNA Met
B SNSL254_A3215 tRNA-Met K14230 tRNA-Met; tRNA Met
B SNSL254_A3216 tRNA-Met K14230 tRNA-Met; tRNA Met
B SNSL254_A3547 tRNA-Met K14230 tRNA-Met; tRNA Met
B SNSL254_A3366 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
B SNSL254_A4682 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
B SNSL254_A3912 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B SNSL254_A2423 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B SNSL254_A4214 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
B SNSL254_A3027 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SNSL254_A2165 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SNSL254_A1128 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SNSL254_A0983 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SNSL254_A1229 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
B SNSL254_A4477 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B SNSL254_A3660 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B SNSL254_A4473 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B SNSL254_A0364 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
B SNSL254_A4179 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
B SNSL254_A1884 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B SNSL254_A1886 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B SNSL254_A4474 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
B SNSL254_A0815 tRNA-Val K14237 tRNA-Val; tRNA Val
B SNSL254_A2609 tRNA-Val K14237 tRNA-Val; tRNA Val
B SNSL254_A2608 tRNA-Val K14237 tRNA-Val; tRNA Val
B SNSL254_A2610 tRNA-Val K14237 tRNA-Val; tRNA Val
B SNSL254_A1533 tRNA-Val K14237 tRNA-Val; tRNA Val
B SNSL254_A1534 tRNA-Val K14237 tRNA-Val; tRNA Val
B SNSL254_A4031 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
#
ARibosomal RNA
B Prokaryotic rRNA
C SNSL254_A0272 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SNSL254_A4267 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SNSL254_A2874 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SNSL254_A4172 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SNSL254_A3666 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SNSL254_A4464 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SNSL254_A4511 rrs; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C SNSL254_A4174 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SNSL254_A3664 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SNSL254_A4466 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SNSL254_A4270 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SNSL254_A0275 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SNSL254_A2872 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SNSL254_A4513 rrl; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C SNSL254_A0278 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SNSL254_A4516 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SNSL254_A4469 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SNSL254_A4177 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SNSL254_A2869 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SNSL254_A4273 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SNSL254_A3661 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C SNSL254_A3659 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
B Eukaryotic rRNA
#
ASmall non-coding RNA
B Micro RNA
B Small nuclear RNA
B Small nucleolar RNA
#
ALong-non-coding RNA
#
AOther RNA
B Signal recognition particle
C SNSL254_A0517 srpB; Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
B Ribonuclease P
C SNSL254_A3508 Bacterial RNase P class A K01978 rnpB; M1 RNA
B Antisense regulators
C SNSL254_A2310 QUAD RNA K18864 sibA; sRNA antisense regulator of IbsA protein
C SNSL254_A3459 QUAD RNA K18868 sibD; sRNA antisense regulator of IbsD protein
B Unclassified
C SNSL254_A2909 SNSL254_A2909 K15035 ssrA; transfer-messenger RNA
C SNSL254_A2148 DsrA RNA K18502 dsrA; small regulatory RNA DsrA
C SNSL254_A0549 sroB; sroB RNA K18503 chiX; small regulatory RNA ChiX
C SNSL254_A3589 SraH RNA K18504 arcZ; small regulatory RNA ArcZ
C SNSL254_A2766 tke1 RNA K15841 glmY; small regulatory RNA GlmY
C SNSL254_A4216 SraJ RNA K18505 glmZ; small regulatory RNA GlmZ
C SNSL254_A0119 SgrS RNA K18506 sgrS; small regulatory RNA SgrS
C SNSL254_A3813 RyhB RNA K18507 ryhB; small regulatory RNA RyhB
C SNSL254_A0942 rybB; RybB RNA K18508 rybB; small regulatory RNA RybB
C SNSL254_A1755 RydC RNA K18509 rydC; small regulatory RNA RydC
C SNSL254_A3019 sraD; SraD RNA K18511 micA; small regulatory RNA MicA
C SNSL254_A1769 MicC RNA K18512 micC; small regulatory RNA MicC
C SNSL254_A2453 micF; MicF RNA K18513 micF; small regulatory RNA MicF
C SNSL254_A3189 CsrB/RsmB RNA family K18515 csrB; small regulatory RNA CsrB
C SNSL254_A4284 CsrC RNA family K18516 csrC; small regulatory RNA CsrC
C SNSL254_A1475 rprA; RprA RNA K18518 rprA; small regulatory RNA RprA
C SNSL254_A2322 RyeE RNA K18520 cyaR; small regulatory RNA CyaR
C SNSL254_A3208 gcvB; GcvB RNA K18521 gcvB; small regulatory RNA GcvB
C SNSL254_A3239 SraE_OmrA_OmrB family RNA K18522 omrA; small regulatory RNA OmrA
C SNSL254_A3240 SraE_OmrA_OmrB family RNA K18523 omrB; small regulatory RNA OmrB
C SNSL254_A4282 spf; Spot 42 RNA K18527 spf; small regulatory RNA Spot 42
C SNSL254_A4455 oxyS; OxyS RNA K18528 oxyS; small regulatory RNA OxyS
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: January 23, 2024