+E Replication protein KO
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DNA Replication Proteins - Shigella flexneri 2003036
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AEukaryotic type
B DNA Replication Initiation Factors
C pre-RC (pre-replication complex)
C CDK (cyclin dependent kinase)
C DDK (Dbf-4 dependent kinase)
C GINS complex
C Other initiation factors
B DNA Replication Elongation Factors
C DNA polymerase alpha / primase complex
C DNA polymerase epsilon complex
C DNA polymerase delta complex
C DNA polymerase gamma complex (mitochondrial)
C RPA (replication protein A)
C RFC (replication factor C)
C RNase H
D SFy_0272 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
C Other elongation factors
B DNA Replication Termination Factors
C DNA methylation enzymes
D SFy_2869 Dcm K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
C Prevention of re-replication factors
C Telomere proteins
D Shelterin complex
D TERB1-TERB2-MAJIN complex
D CST complex (animals)
D CST complex (yeast)
D RIF proteins
D SIR proteins
C Telomerase complex (animals)
D Dyskerin complex
C Telomerase complex (fungi)
D Sm core complex
C ELG1-RFC complex
C MRN complex
C Other termination factors
B DNA Topoisomerases
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AProkaryotic type
B DNA Replication Initiation Factors
C Initiation factors (bacterial)
D SFy_5833 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D SFy_0483 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D SFy_2175 Integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D SFy_1240 Integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D SFy_5359 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D SFy_0933 helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SFy_5966 Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SFy_1181 replication protein K02315 dnaC; DNA replication protein DnaC
D SFy_6305 DNA replication protein dnaC K02315 dnaC; DNA replication protein DnaC
D SFy_0932 replication protein DnaC K02315 dnaC; DNA replication protein DnaC
D SFy_4431 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SFy_5958 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
C Initiation factors (archaeal)
B DNA Replication Elongation Factors
C Elongation factors (bacterial)
D DNA polymerase III holoenzyme
E SFy_0236 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
E SFy_5360 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
E SFy_6072 HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
E SFy_0873 HolA K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
E SFy_1589 HolB K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
E SFy_0274 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
E SFy_0524 DnaX K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
E SFy_6320 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
E SFy_2655 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D RNase H
E SFy_0272 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E SFy_0233 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Other elongation factors
E SFy_5617 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
E SFy_3502 DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
E SFy_5253 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C Elongation factors (archaeal)
D B-family DNA polymerases
D D-family DNA polymerases
D RNase H
E SFy_0272 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
E SFy_0233 Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D RFC (replication factor C)
D Other elongation factors
B DNA Replication Termination Factors
C Terminus site-binding protein
D SFy_2335 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein
C DNA methylation enzymes
D SFy_4838 Dam methyltransferase with SUUR K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C Prevention of re-replication factors
D SFy_0819 hypothetical protein K03645 seqA; negative modulator of initiation of replication
D SFy_3614 DNA replication initiation factor K10763 hda; DnaA-homolog protein
B DNA Topoisomerases
C SFy_3285 GyrA K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
C SFy_5363 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
C SFy_4373 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
C SFy_4382 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
C SFy_1833 TopA K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C SFy_2086 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 2, 2022