+D GENES KO
#
KEGG Orthology (KO) - Streptococcus mutans LJ23 (serotype k)
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:smj00010]
D SMULJ23_1446 glk; putative glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMULJ23_1661 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMULJ23_0854 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMULJ23_0080 fba; fructose-1,6-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_1477 fbaA; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_1283 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMULJ23_1616 gapC; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMULJ23_1414 gapC; putative glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMULJ23_1615 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SMULJ23_1389 pmgY; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMULJ23_0806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMULJ23_0855 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMULJ23_0105 adhA; putative acetoin dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SMULJ23_0106 adhB; putative acetoin dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SMULJ23_0688 pdhC; putative dihydrolipoamide acetyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMULJ23_0107 adhC; putative dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0924 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMULJ23_0099 adh1; putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMULJ23_0123 adhE; putative alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SMULJ23_0958 pgm; putative phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMULJ23_1316 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SMULJ23_0715 pckA; putative phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SMULJ23_1047 bglA; putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SMULJ23_0936 arb; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SMULJ23_0526 celA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
C 00020 Citrate cycle (TCA cycle) [PATH:smj00020]
D SMULJ23_1321 citZ; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SMULJ23_1322 citB; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SMULJ23_1320 idh; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0715 pckA; putative phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SMULJ23_0105 adhA; putative acetoin dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SMULJ23_0106 adhB; putative acetoin dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SMULJ23_0688 pdhC; putative dihydrolipoamide acetyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMULJ23_0107 adhC; putative dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:smj00030]
D SMULJ23_1661 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMULJ23_1624 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SMULJ23_1679 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SMULJ23_0819 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SMULJ23_0916 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D SMULJ23_0820 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SMULJ23_0958 pgm; putative phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMULJ23_0984 krpS; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMULJ23_0019 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMULJ23_1316 gapN; NADP-dependent glyceraldehyde-3-phosphate dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D SMULJ23_0080 fba; fructose-1,6-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_1477 fbaA; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_0854 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:smj00040]
D SMULJ23_1648 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMULJ23_1698 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SMULJ23_1697 sgaU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SMULJ23_1696 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D SMULJ23_1624 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:smj00051]
D SMULJ23_0318 scrK; putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SMULJ23_0319 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SMULJ23_0854 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMULJ23_0862 mtlD; mannitol-phosphate dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D SMULJ23_1660 sorD; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D SMULJ23_1142 pfkB; putative fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D SMULJ23_0080 fba; fructose-1,6-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_1477 fbaA; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_1283 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMULJ23_0063 fruA; fructan hydrolase FruA K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D SMULJ23_0095 putative PTS system fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D SMULJ23_0094 putative PTS system fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMULJ23_1141 fruAB; putative PTS system, fructose-specific enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMULJ23_0285 ptnA; putative PTS system mannose-specific component IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SMULJ23_0082 putative sorbose PTS system IIC component K02795 manY; mannose PTS system EIIC component
D SMULJ23_0221 levC; putative PTS system mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SMULJ23_0284 ptnC; putative PTS system mannose-specific component IIC K02795 manY; mannose PTS system EIIC component
D SMULJ23_0083 putative PTS system IID component K02796 manZ; mannose PTS system EIID component
D SMULJ23_0283 putative PTS system mannose-specific component IID K02796 manZ; mannose PTS system EIID component
D SMULJ23_0861 mtlA2; PTS system, mannitol-specific enzyme IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SMULJ23_0859 mtlA1; PTS system, mannitol-specific enzyme IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SMULJ23_1655 srlB; putative PTS system, sorbitol-specific enzyme IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SMULJ23_1656 srlE; PTS system sorbitol phosphotransferase enzyme IIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D SMULJ23_1657 srlA; PTS system glucitol/sorbitol-specific transporter subunit IIC2 K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:smj00052]
D SMULJ23_1127 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SMULJ23_1126 galT; galactose-1-P-uridyl transferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SMULJ23_1808 galE; putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMULJ23_1125 galE; UDP-galactose 4-epimerase, GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMULJ23_1648 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMULJ23_0958 pgm; putative phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMULJ23_1446 glk; putative glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMULJ23_1135 agaL; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D SMULJ23_0622 lacC; tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D SMULJ23_0854 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMULJ23_0623 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SMULJ23_0096 lacD2; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SMULJ23_0620 lacA; galactose-6-phosphate isomerase subunit LacA K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SMULJ23_0621 lacB; galactose-6-phosphate isomerase subunit LacB K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D SMULJ23_0629 lacG; 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D SMULJ23_0627 lacF; PTS system lactose-specific enzyme IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SMULJ23_0628 lacE; PTS system lactose-specific enzyme IIBC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SMULJ23_0316 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SMULJ23_0219 levA; putative PTS system sugar-specific enzyme IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
C 00053 Ascorbate and aldarate metabolism [PATH:smj00053]
D SMULJ23_1699 ptxA; putative PTS system, enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SMULJ23_1480 putative PTS family porter component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SMULJ23_1700 ptxB; putative PTS system, enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SMULJ23_1479 putative PTS family porter component IIC K03475 ulaA; ascorbate PTS system EIIC component
D SMULJ23_1701 sgaT; PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D SMULJ23_1680 ulaG; putative L-ascorbate 6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D SMULJ23_1698 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D SMULJ23_1697 sgaU; putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D SMULJ23_1696 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:smj00500]
D SMULJ23_0317 scrA; putative PTS system sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SMULJ23_0316 scrB; sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D SMULJ23_1026 gtfC; glucosyltransferase-SI K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D SMULJ23_1111 gtfD; glucosyltransferase-S K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D SMULJ23_1027 gtfB; glucosyltransferase-I K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D SMULJ23_1131 gtfA; sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D SMULJ23_1648 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMULJ23_0529 ptcA; putative PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SMULJ23_0527 celB; cellobiose phosphotransferase system IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SMULJ23_0531 ptcC; cellobiose phosphotransferase system IIC component K02761 celB; cellobiose PTS system EIIC component
D SMULJ23_1047 bglA; putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SMULJ23_0936 arb; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SMULJ23_0526 celA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D SMULJ23_0582 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SMULJ23_0583 glgD; putative glycogen biosynthesis protein K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SMULJ23_0584 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SMULJ23_0581 glgB; putative 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SMULJ23_0560 glgP; putative glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SMULJ23_0585 phsG; glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D SMULJ23_0580 pulA; putative pullulanase K01200 pulA; pullulanase [EC:3.2.1.41]
D SMULJ23_0536 amyA; cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D SMULJ23_1789 dexA; dextranase precursor K05988 dexA; dextranase [EC:3.2.1.11]
D SMULJ23_0559 malQ; putative 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D SMULJ23_1793 ptsG; putative PTS system, glucose-specific IIABC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SMULJ23_1792 hypothetical protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D SMULJ23_1786 pttB; putative PTS system, trehalose-specific IIABC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SMULJ23_1785 treA; putative trehalose-6-phosphate hydrolase TreA K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D SMULJ23_0958 pgm; putative phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMULJ23_1446 glk; putative glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMULJ23_1661 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMULJ23_0318 scrK; putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:smj00520]
D SMULJ23_1546 nagA; putative N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D SMULJ23_1354 nagB; putative N-acetylglucosamine-6-phosphate isomerase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D SMULJ23_0318 scrK; putative fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D SMULJ23_0858 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMULJ23_0683 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D SMULJ23_0497 glmU; putative UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SMULJ23_0553 murZ; putative UDP-N-acetylglucosamine-1-carboxyvinyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMULJ23_0595 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMULJ23_1057 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SMULJ23_0673 epsC; putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D SMULJ23_1446 glk; putative glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMULJ23_0958 pgm; putative phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMULJ23_1648 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMULJ23_1127 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SMULJ23_1126 galT; galactose-1-P-uridyl transferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D SMULJ23_1808 galE; putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMULJ23_1125 galE; UDP-galactose 4-epimerase, GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMULJ23_0285 ptnA; putative PTS system mannose-specific component IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SMULJ23_0082 putative sorbose PTS system IIC component K02795 manY; mannose PTS system EIIC component
D SMULJ23_0221 levC; putative PTS system mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SMULJ23_0284 ptnC; putative PTS system mannose-specific component IIC K02795 manY; mannose PTS system EIIC component
D SMULJ23_0083 putative PTS system IID component K02796 manZ; mannose PTS system EIID component
D SMULJ23_0283 putative PTS system mannose-specific component IID K02796 manZ; mannose PTS system EIID component
D SMULJ23_1661 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMULJ23_0319 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SMULJ23_0582 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D SMULJ23_0583 glgD; putative glycogen biosynthesis protein K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:smj00620]
D SMULJ23_0105 adhA; putative acetoin dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SMULJ23_0106 adhB; putative acetoin dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SMULJ23_0688 pdhC; putative dihydrolipoamide acetyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMULJ23_0107 adhC; putative dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_1577 pf1; pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SMULJ23_0123 adhE; putative alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SMULJ23_0099 adh1; putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMULJ23_0201 ackA; putative acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SMULJ23_0989 eutD; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMULJ23_0855 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMULJ23_0404 accA; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMULJ23_0400 bccP; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMULJ23_0402 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMULJ23_0403 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMULJ23_0412 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D SMULJ23_0924 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMULJ23_0932 hypothetical protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SMULJ23_0524 lguL; putative lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D SMULJ23_0733 hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D SMULJ23_1009 pycB; oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SMULJ23_1015 oadB; putative oxaloacetate decarboxylase, sodium ion pump subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SMULJ23_0115 mleS; malate dehydrogenase K22212 mleA; malolactic enzyme [EC:4.1.1.101]
D SMULJ23_1291 capP; putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SMULJ23_0715 pckA; putative phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D SMULJ23_0719 leuA; putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:smj00630]
D SMULJ23_1321 citZ; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D SMULJ23_1322 citB; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SMULJ23_0800 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D SMULJ23_1612 glnA; glutamine synthetase type 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMULJ23_0953 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0802 grk; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SMULJ23_0117 oxdC; putative oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
C 00640 Propanoate metabolism [PATH:smj00640]
D SMULJ23_0201 ackA; putative acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SMULJ23_0989 eutD; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_1577 pf1; pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SMULJ23_0404 accA; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMULJ23_0400 bccP; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMULJ23_0402 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMULJ23_0403 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMULJ23_0924 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMULJ23_1496 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:smj00650]
D SMULJ23_0123 adhE; putative alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SMULJ23_1015 oadB; putative oxaloacetate decarboxylase, sodium ion pump subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SMULJ23_1016 bcc; putative acetyl-CoA carboxylase biotin carboxylcarrier subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SMULJ23_1887 gabD; putative succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SMULJ23_1577 pf1; pyruvate formate-lyase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D SMULJ23_1082 mvaS; putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SMULJ23_0661 aldS; alpha-acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMULJ23_1736 ilvB; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMULJ23_1735 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SMULJ23_0662 aldB; putative alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SMULJ23_0734 budC; putative acetoin dehydrogenase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:smj00660]
D SMULJ23_0661 aldS; alpha-acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMULJ23_1736 ilvB; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMULJ23_1735 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SMULJ23_0662 aldB; putative alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D SMULJ23_0721 leuC; putative 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SMULJ23_0722 leuD; putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SMULJ23_0720 leuB; putative 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:smj00562]
D SMULJ23_0900 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SMULJ23_1283 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:smj00190]
D SMULJ23_0590 atpD; F0F1 membrane-bound proton-translocating ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SMULJ23_0592 atpB; F0F1 membrane-bound proton-translocating ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SMULJ23_0591 atpC; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SMULJ23_0589 atpE; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SMULJ23_0593 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SMULJ23_0587 atpG; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SMULJ23_0588 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SMULJ23_0586 atpH; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SMULJ23_0448 ppaC; putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:smj00710]
D SMULJ23_1615 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SMULJ23_1616 gapC; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMULJ23_1414 gapC; putative glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMULJ23_0080 fba; fructose-1,6-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_1477 fbaA; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_1679 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D SMULJ23_0819 rpiA; ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D SMULJ23_1283 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMULJ23_1624 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D SMULJ23_1291 capP; putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SMULJ23_0715 pckA; putative phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00720 Other carbon fixation pathways [PATH:smj00720]
D SMULJ23_1291 capP; putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SMULJ23_1320 idh; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D SMULJ23_1322 citB; aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D SMULJ23_0404 accA; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMULJ23_0400 bccP; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMULJ23_0402 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMULJ23_0403 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMULJ23_0962 fthS; putative formyl-tetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SMULJ23_1412 folD; putative tetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SMULJ23_1420 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SMULJ23_0989 eutD; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMULJ23_0201 ackA; putative acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:smj00680]
D SMULJ23_0099 adh1; putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMULJ23_0098 putative esterase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D SMULJ23_0953 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMULJ23_0806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMULJ23_1291 capP; putative phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D SMULJ23_0080 fba; fructose-1,6-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_1477 fbaA; fructose/tagatose bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D SMULJ23_0854 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMULJ23_0201 ackA; putative acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D SMULJ23_0989 eutD; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMULJ23_1389 pmgY; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMULJ23_0480 serA; putative D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMULJ23_0477 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SMULJ23_0782 serB; putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:smj00910]
D SMULJ23_1109 gdh; putative NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SMULJ23_1612 glnA; glutamine synthetase type 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMULJ23_1611 gltA; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SMULJ23_1610 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SMULJ23_1838 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SMULJ23_1704 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SMULJ23_1643 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D SMULJ23_0532 cah; putative carbonic anhydrase precursor K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:smj00920]
D SMULJ23_1339 putative ABC transporter, substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SMULJ23_1337 putative ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D SMULJ23_1338 putative ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SMULJ23_0758 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D SMULJ23_0127 cysE; putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SMULJ23_1495 cysK; putative cysteine synthetase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SMULJ23_0649 metA; putative homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SMULJ23_0458 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:smj00061]
D SMULJ23_0404 accA; acetyl-CoA carboxylase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D SMULJ23_0400 bccP; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D SMULJ23_0402 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D SMULJ23_0403 accD; acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D SMULJ23_0395 acp; acyl carrier protein K02078 acpP; acyl carrier protein
D SMULJ23_0023 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D SMULJ23_0397 fabD; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMULJ23_0157 pksA; putative PKS acyl-CoA transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMULJ23_0394 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SMULJ23_0399 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMULJ23_0398 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMULJ23_0401 fabZ; putative 3-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SMULJ23_0396 fabK; putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SMULJ23_0392 phaB; enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D SMULJ23_0099 adh1; putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMULJ23_0123 adhE; putative alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:smj00561]
D SMULJ23_0802 grk; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SMULJ23_1496 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D SMULJ23_0022 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SMULJ23_0841 plsY; putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SMULJ23_1366 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SMULJ23_0579 putative lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SMULJ23_0538 putative hexosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SMULJ23_0537 putative hexosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D SMULJ23_1234 putative sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D SMULJ23_1135 agaL; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:smj00564]
D SMULJ23_1647 gbpS; putative glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D SMULJ23_0841 plsY; putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SMULJ23_1366 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D SMULJ23_0579 putative lipid kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D SMULJ23_1275 gdpD; putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D SMULJ23_0358 cdsA; putative phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D SMULJ23_1908 pgsA; putative phosphotidylglycerophosphate synthase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D SMULJ23_1044 cls; putative cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:smj00600]
D SMULJ23_1135 agaL; alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:smj00230]
D SMULJ23_0498 nudF; putative ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D SMULJ23_0820 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D SMULJ23_0958 pgm; putative phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMULJ23_0984 krpS; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMULJ23_0019 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D SMULJ23_0028 purF; phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SMULJ23_0039 purD; putative phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D SMULJ23_0031 purN; putative phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SMULJ23_0026 purL; putative phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D SMULJ23_0030 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D SMULJ23_0042 purK; phosphoribosylaminoimidazole carboxylase ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D SMULJ23_0041 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D SMULJ23_0025 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D SMULJ23_0047 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SMULJ23_0032 purH; putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SMULJ23_0648 aptA; putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SMULJ23_0824 punA; putative purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SMULJ23_0826 deoD; putative purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SMULJ23_0012 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D SMULJ23_1914 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SMULJ23_0419 putative deoxyribonucleotide triphosphate pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D SMULJ23_0969 guaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMULJ23_0825 gat; glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMULJ23_1512 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D SMULJ23_1324 nrdE2; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMULJ23_1325 nrdG; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMULJ23_1818 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SMULJ23_1791 relA; putative stringent response protein, ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SMULJ23_0986 relA; putative GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SMULJ23_1098 putative GTP-pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D SMULJ23_1702 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SMULJ23_0760 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D SMULJ23_1752 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SMULJ23_1838 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SMULJ23_1704 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:smj00240]
D SMULJ23_1152 carB; carbamoylphosphate synthetase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SMULJ23_1153 pyrA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SMULJ23_1154 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SMULJ23_0839 pyrC; putative dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D SMULJ23_0830 pyrDB; putative dihydroorotate dehydrogenase B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D SMULJ23_0829 pyrK; dihydroorotate dehydrogenase electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D SMULJ23_1390 pyrD; dihydroorotate dehydrogenase 1A K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D SMULJ23_0832 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D SMULJ23_0831 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D SMULJ23_0506 pyrH; putative uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D SMULJ23_0078 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D SMULJ23_1304 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D SMULJ23_0718 urk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D SMULJ23_0460 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D SMULJ23_1156 pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SMULJ23_0915 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D SMULJ23_0917 cdd; putative cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D SMULJ23_1818 nrdD; anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D SMULJ23_1324 nrdE2; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMULJ23_1325 nrdG; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMULJ23_0310 comEB; putative deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SMULJ23_0470 kthY; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D SMULJ23_1646 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SMULJ23_0949 kitH; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D SMULJ23_1081 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SMULJ23_0992 ydfG; putative oxidoreductase, short-chain dehydrogenase/reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:smj00250]
D SMULJ23_0327 aspG; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SMULJ23_0743 aspB; aspartate aminotransferase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D SMULJ23_0240 cnhA; putative carbon-nitrogen hydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D SMULJ23_0331 yfbQ; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMULJ23_1637 araG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SMULJ23_1636 araH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SMULJ23_1702 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D SMULJ23_0047 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D SMULJ23_1154 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D SMULJ23_1887 gabD; putative succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D SMULJ23_1611 gltA; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SMULJ23_1610 gltD; glutamate synthase subunit beta K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D SMULJ23_1109 gdh; putative NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SMULJ23_1612 glnA; glutamine synthetase type 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMULJ23_1152 carB; carbamoylphosphate synthetase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SMULJ23_1153 pyrA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SMULJ23_0858 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMULJ23_0028 purF; phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:smj00260]
D SMULJ23_0390 akh; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SMULJ23_1042 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMULJ23_1064 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SMULJ23_1063 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D SMULJ23_0056 thrC; putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D SMULJ23_0953 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMULJ23_0802 grk; putative glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D SMULJ23_1389 pmgY; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMULJ23_0480 serA; putative D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMULJ23_0477 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SMULJ23_0782 serB; putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D SMULJ23_0992 ydfG; putative oxidoreductase, short-chain dehydrogenase/reductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_1733 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SMULJ23_0043 putative amino acid recemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SMULJ23_1450 trpA; putative tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SMULJ23_1451 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:smj00270]
D SMULJ23_0127 cysE; putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D SMULJ23_1495 cysK; putative cysteine synthetase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D SMULJ23_0459 metC; putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SMULJ23_1074 mmuM; homocysteine methyltransferase K00547 mmuM; homocysteine S-methyltransferase [EC:2.1.1.10]
D SMULJ23_1139 yitJ; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SMULJ23_1140 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SMULJ23_0552 metK; putative S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D SMULJ23_0500 pfs; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D SMULJ23_0543 hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D SMULJ23_1514 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SMULJ23_1415 ycgE; putative S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SMULJ23_0390 akh; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SMULJ23_1042 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMULJ23_1064 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SMULJ23_0649 metA; putative homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D SMULJ23_0458 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SMULJ23_0870 cysD; putative O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D SMULJ23_0845 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMULJ23_1703 gshA; putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SMULJ23_0924 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMULJ23_0043 putative amino acid recemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SMULJ23_0480 serA; putative D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMULJ23_0477 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:smj00280]
D SMULJ23_0845 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_1082 mvaS; putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:smj00290]
D SMULJ23_1733 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D SMULJ23_0721 leuC; putative 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D SMULJ23_0722 leuD; putative 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D SMULJ23_0720 leuB; putative 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D SMULJ23_0661 aldS; alpha-acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMULJ23_1736 ilvB; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMULJ23_1735 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SMULJ23_1734 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SMULJ23_1888 ilvD; putative dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SMULJ23_0845 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMULJ23_0331 yfbQ; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMULJ23_0719 leuA; putative 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:smj00300]
D SMULJ23_1064 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D SMULJ23_0390 akh; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SMULJ23_1042 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMULJ23_1041 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SMULJ23_1118 dapB; putative dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D SMULJ23_1653 dapD; putative tetrahydrodipicolinate succinylase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D SMULJ23_1326 argD; putative N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SMULJ23_0237 atmC; putative peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SMULJ23_0416 lysA; putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D SMULJ23_0020 aspC; aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SMULJ23_1652 hipO3; putative hippurate hydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D SMULJ23_1383 murF; putative D-Ala-D-Ala adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:smj00310]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0043 putative amino acid recemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SMULJ23_1887 gabD; putative succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:smj00220]
D SMULJ23_1839 arcB; putative ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SMULJ23_1427 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D SMULJ23_1637 araG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SMULJ23_1636 araH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SMULJ23_1840 arcA; putative arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D SMULJ23_1612 glnA; glutamine synthetase type 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMULJ23_1152 carB; carbamoylphosphate synthetase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D SMULJ23_1153 pyrA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D SMULJ23_1838 arcC; putative carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SMULJ23_1704 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D SMULJ23_1109 gdh; putative NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D SMULJ23_0331 yfbQ; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMULJ23_1328 argJ; putative ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D SMULJ23_1327 argB; putative acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D SMULJ23_1329 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D SMULJ23_1326 argD; putative N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:smj00330]
D SMULJ23_1705 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D SMULJ23_0835 nylA; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SMULJ23_0207 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D SMULJ23_1536 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SMULJ23_1535 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:smj00340]
D SMULJ23_0780 hisG; ATP phosphoribosyltransferase catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D SMULJ23_0779 hisZ; putative histidyl-tRNA synthetase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D SMULJ23_0790 hisE; putative phosphoribosyl-ATP pyrophosphohydrolase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D SMULJ23_0788 hisI; putative phosphoribosyl-ATP pyrophosphatase / phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D SMULJ23_0786 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D SMULJ23_0785 hisH; putative glutamine amidotransferase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D SMULJ23_0787 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D SMULJ23_0783 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D SMULJ23_0778 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMULJ23_0633 hisK; putative phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D SMULJ23_0781 hisD; putative histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D SMULJ23_0173 putative oxidoreductase K17363 urdA; urocanate reductase [EC:1.3.99.33]
C 00350 Tyrosine metabolism [PATH:smj00350]
D SMULJ23_0778 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMULJ23_0099 adh1; putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMULJ23_0123 adhE; putative alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D SMULJ23_1887 gabD; putative succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:smj00360]
D SMULJ23_0778 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMULJ23_0835 nylA; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:smj00380]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0835 nylA; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:smj00400]
D SMULJ23_0321 aroG; putative DAHP synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMULJ23_0322 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMULJ23_1230 aroB; putative 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D SMULJ23_1232 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D SMULJ23_1225 aroK; putative shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D SMULJ23_1226 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D SMULJ23_1229 aroC; putative chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D SMULJ23_1456 trpE; putative anthranilate synthase subunit alpha K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SMULJ23_1455 trpG; putative anthranilate synthase subunit beta K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SMULJ23_1454 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D SMULJ23_1452 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D SMULJ23_1453 trpC; putative indoleglycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D SMULJ23_1450 trpA; putative tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D SMULJ23_1451 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D SMULJ23_0764 aroH; putative mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D SMULJ23_1228 tyrA; putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SMULJ23_1224 pheA; putative prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D SMULJ23_0778 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:smj00430]
D SMULJ23_0989 eutD; putative phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D SMULJ23_0201 ackA; putative acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:smj00450]
D SMULJ23_0458 metB; cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D SMULJ23_0459 metC; putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SMULJ23_1139 yitJ; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SMULJ23_1140 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D SMULJ23_1719 nifS; putative class-V aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D SMULJ23_1524 trxB; putative thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SMULJ23_0145 trxB1; putative thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D SMULJ23_0494 metG; putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:smj00460]
D SMULJ23_0327 aspG; putative L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D SMULJ23_0953 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:smj00470]
D SMULJ23_0324 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SMULJ23_1386 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMULJ23_0444 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMULJ23_0446 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMULJ23_0043 putative amino acid recemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D SMULJ23_0418 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SMULJ23_1441 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SMULJ23_0416 lysA; putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:smj00480]
D SMULJ23_1703 gshA; putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D SMULJ23_0908 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SMULJ23_1173 gshR; glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SMULJ23_0118 putative glutathione reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D SMULJ23_1320 idh; isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:smj00542]
D SMULJ23_1722 rgpG; putative glycosyl transferase N-acetylglucosaminyltransferase RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:smj00541]
D SMULJ23_1648 galU; glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D SMULJ23_1808 galE; putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMULJ23_1125 galE; UDP-galactose 4-epimerase, GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D SMULJ23_0653 rmlA; putative glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMULJ23_0656 rmlB; putative dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SMULJ23_0654 rmlC; dTDP-4-keto-L-rhamnose reductase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SMULJ23_1189 rfbD; dTDP-4-keto-L-rhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D SMULJ23_0319 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D SMULJ23_0497 glmU; putative UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D SMULJ23_0673 epsC; putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:smj00550]
D SMULJ23_0553 murZ; putative UDP-N-acetylglucosamine-1-carboxyvinyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMULJ23_0595 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMULJ23_1057 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SMULJ23_0407 murC; putative UDP-N-acetyl muramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SMULJ23_1441 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SMULJ23_1386 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMULJ23_1383 murF; putative D-Ala-D-Ala adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SMULJ23_0513 dagK; diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D SMULJ23_0357 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SMULJ23_1724 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMULJ23_0434 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMULJ23_1531 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SMULJ23_1440 murG; undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SMULJ23_1520 pbp1a; penicillin-binding protein 1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMULJ23_0228 pbp2a; putative membrane carboxypeptidase, penicillin-binding protein 2a K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SMULJ23_1715 dacA; putative D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMULJ23_0061 putative D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMULJ23_0456 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SMULJ23_0680 murC2; putative UDP-N-acetylmuramyl tripeptide synthetase MurC K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SMULJ23_0679 cobQ; putative cobyric acid synthase CobQ K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D SMULJ23_1281 murM; putative peptidoglycan branched peptide synthesis protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SMULJ23_1282 murN; putative peptidoglycan branched peptide synthesis protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SMULJ23_0189 pbp1b; putative membrane carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B
D SMULJ23_1388 pbp2b; penicillin-binding protein 2b K00687 pbp2B; penicillin-binding protein 2B
D SMULJ23_1532 pbp2X; putative penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:smj00552]
D SMULJ23_1724 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMULJ23_0434 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMULJ23_1722 rgpG; putative glycosyl transferase N-acetylglucosaminyltransferase RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SMULJ23_0444 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMULJ23_0446 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMULJ23_0445 dltB; putative D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SMULJ23_0447 dltD; putative extramembranal protein DltD K03740 dltD; D-alanine transfer protein
D SMULJ23_1223 putative transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SMULJ23_1569 brpA; putative transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D SMULJ23_1234 putative sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D SMULJ23_0538 putative hexosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:smj00543]
D SMULJ23_1722 rgpG; putative glycosyl transferase N-acetylglucosaminyltransferase RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SMULJ23_0127 cysE; putative serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:smj00730]
D SMULJ23_1170 nifS2; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMULJ23_0983 icsS1; iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMULJ23_1169 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SMULJ23_1625 engC; ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SMULJ23_1623 hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D SMULJ23_1752 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:smj00740]
D SMULJ23_1573 hypothetical protein K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D SMULJ23_0897 ribC; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D SMULJ23_0498 nudF; putative ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:smj00750]
D SMULJ23_1072 pdxK; pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SMULJ23_0070 thiD; phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D SMULJ23_0477 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D SMULJ23_0056 thrC; putative threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:smj00760]
D SMULJ23_1523 pncB; putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D SMULJ23_0824 punA; putative purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SMULJ23_0826 deoD; putative purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D SMULJ23_0346 nadD; nicotinic acid mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D SMULJ23_1161 hypothetical protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D SMULJ23_1522 nadE; NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D SMULJ23_0987 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D SMULJ23_1887 gabD; putative succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:smj00770]
D SMULJ23_0661 aldS; alpha-acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMULJ23_1736 ilvB; acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D SMULJ23_1735 ilvH; acetolactate synthase 3 regulatory subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D SMULJ23_1734 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D SMULJ23_1888 ilvD; putative dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D SMULJ23_0913 coaA; putative pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D SMULJ23_0961 coaB; phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D SMULJ23_0960 coaC; phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D SMULJ23_1469 coaD; putative phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D SMULJ23_0518 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D SMULJ23_0323 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D SMULJ23_0165 nrpC; putative 4'-phosphopantetheinyl transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D SMULJ23_0845 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:smj00780]
D SMULJ23_0399 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMULJ23_0398 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMULJ23_0401 fabZ; putative 3-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SMULJ23_0546 birA; putative biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:smj00785]
D SMULJ23_0109 lplA; putative lipoate-protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0105 adhA; putative acetoin dehydrogenase E1 component subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D SMULJ23_0106 adhB; putative acetoin dehydrogenase E1 component subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D SMULJ23_0688 pdhC; putative dihydrolipoamide acetyltransferase E2 component K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D SMULJ23_0107 adhC; putative dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:smj00790]
D SMULJ23_1061 folE; putative GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D SMULJ23_1059 folA; putative dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D SMULJ23_1058 folK; putative 2-amino-4-hydroxy-6-hydroxymethylpteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D SMULJ23_1060 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D SMULJ23_1079 dfrA; putative dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SMULJ23_1172 fol; putative folyl-polyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SMULJ23_1062 folC; putative folyl-polyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D SMULJ23_1105 ptpS; putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SMULJ23_1106 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SMULJ23_1104 queC; putative aluminium resistance ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SMULJ23_1107 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:smj00670]
D SMULJ23_1079 dfrA; putative dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D SMULJ23_0962 fthS; putative formyl-tetrahydrofolate synthetase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D SMULJ23_1412 folD; putative tetrahydrofolate dehydrogenase/cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SMULJ23_1420 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D SMULJ23_0953 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D SMULJ23_0031 purN; putative phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D SMULJ23_0032 purH; putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SMULJ23_1509 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SMULJ23_1139 yitJ; bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein K24042 yitJ; methionine synthase / methylenetetrahydrofolate reductase (NADH) [EC:2.1.1.13 1.5.1.54]
D SMULJ23_1081 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D SMULJ23_1650 ybhA; putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:smj00860]
D SMULJ23_1806 hemG; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:smj00130]
D SMULJ23_0689 putative oxidoreductase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D SMULJ23_1215 hypothetical protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:smj00900]
D SMULJ23_0184 ipk; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D SMULJ23_1082 mvaS; putative hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D SMULJ23_1083 mvaA; putative hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D SMULJ23_0174 mvaK1; putative mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D SMULJ23_1087 mvaK2; putative phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D SMULJ23_1088 mvaD; putative mevalonate diphosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D SMULJ23_1086 fni; isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D SMULJ23_1404 ispA; putative farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SMULJ23_0357 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D SMULJ23_1679 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:smj00523]
D SMULJ23_0653 rmlA; putative glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMULJ23_0656 rmlB; putative dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SMULJ23_0654 rmlC; dTDP-4-keto-L-rhamnose reductase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SMULJ23_1189 rfbD; dTDP-4-keto-L-rhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D SMULJ23_1457 tyrA; putative chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
C 01055 Biosynthesis of vancomycin group antibiotics
D SMULJ23_0656 rmlB; putative dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:smj00332]
D SMULJ23_1536 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D SMULJ23_1535 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:smj00261]
D SMULJ23_0390 akh; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D SMULJ23_1042 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D SMULJ23_1041 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D SMULJ23_1118 dapB; putative dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:smj00521]
D SMULJ23_1446 glk; putative glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
D SMULJ23_0958 pgm; putative phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D SMULJ23_0900 hypothetical protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D SMULJ23_0653 rmlA; putative glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMULJ23_0656 rmlB; putative dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D SMULJ23_0654 rmlC; dTDP-4-keto-L-rhamnose reductase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D SMULJ23_1189 rfbD; dTDP-4-keto-L-rhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D SMULJ23_1446 glk; putative glucose kinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:smj00525]
D SMULJ23_0653 rmlA; putative glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D SMULJ23_0656 rmlB; putative dTDP-glucose-4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:smj00401]
D SMULJ23_1228 tyrA; putative prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D SMULJ23_0778 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D SMULJ23_1456 trpE; putative anthranilate synthase subunit alpha K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SMULJ23_1455 trpG; putative anthranilate synthase subunit beta K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D SMULJ23_0397 fabD; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMULJ23_0157 pksA; putative PKS acyl-CoA transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMULJ23_0398 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D SMULJ23_0395 acp; acyl carrier protein K02078 acpP; acyl carrier protein
D SMULJ23_0023 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D SMULJ23_0552 metK; putative S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:smj00362]
D SMULJ23_0948 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D SMULJ23_1312 putative gamma-carboxymuconolactone decarboxylase subunit K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D SMULJ23_1015 oadB; putative oxaloacetate decarboxylase, sodium ion pump subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SMULJ23_1016 bcc; putative acetyl-CoA carboxylase biotin carboxylcarrier subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
C 00627 Aminobenzoate degradation [PATH:smj00627]
D SMULJ23_0835 nylA; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D SMULJ23_0412 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:smj00625]
D SMULJ23_0099 adh1; putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMULJ23_0123 adhE; putative alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D SMULJ23_0948 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:smj00643]
D SMULJ23_0835 nylA; amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D SMULJ23_0948 xylH; 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:smj00626]
D SMULJ23_0099 adh1; putative alcohol dehydrogenase class III K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D SMULJ23_0123 adhE; putative alcohol-acetaldehyde dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:smj03020]
D SMULJ23_0190 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SMULJ23_0191 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SMULJ23_1747 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SMULJ23_1511 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SMULJ23_0077 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:smj03010]
D SMULJ23_0847 rs1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SMULJ23_1780 rs2; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SMULJ23_1767 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SMULJ23_1894 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SMULJ23_1756 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SMULJ23_0298 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SMULJ23_1618 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SMULJ23_1759 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SMULJ23_0140 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SMULJ23_1774 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SMULJ23_1748 rs11; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SMULJ23_1619 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SMULJ23_1749 rs13; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SMULJ23_1760 rs14; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SMULJ23_0147 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SMULJ23_0124 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SMULJ23_1148 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SMULJ23_1764 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SMULJ23_0300 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SMULJ23_1769 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SMULJ23_0912 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SMULJ23_1196 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SMULJ23_0505 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SMULJ23_1770 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SMULJ23_1773 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SMULJ23_1772 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SMULJ23_1761 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SMULJ23_1758 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SMULJ23_1068 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SMULJ23_1898 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SMULJ23_1069 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SMULJ23_0504 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SMULJ23_0139 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SMULJ23_1763 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SMULJ23_1754 rl15; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SMULJ23_1766 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SMULJ23_1746 rl17; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SMULJ23_1757 rl18; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SMULJ23_0767 rl19; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SMULJ23_1301 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SMULJ23_1165 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SMULJ23_1768 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SMULJ23_1771 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SMULJ23_1762 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SMULJ23_1163 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SMULJ23_0100 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SMULJ23_1765 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SMULJ23_1755 rl30; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SMULJ23_0757 rl31; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SMULJ23_1854 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SMULJ23_0229 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SMULJ23_1855 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SMULJ23_0520 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SMULJ23_1631 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SMULJ23_1302 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SMULJ23_1750 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SMULJ23_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:smj00970]
D SMULJ23_t0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0031 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0022 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMULJ23_t0063 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMULJ23_t0003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMULJ23_t0033 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMULJ23_t0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMULJ23_t0061 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SMULJ23_t0043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMULJ23_t0049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMULJ23_t0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMULJ23_t0064 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMULJ23_t0007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0058 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0029 SMULJ23_tRNA29; tRNA-Pseudo K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0050 tRNA-His K14226 tRNA-His; tRNA His
D SMULJ23_t0017 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMULJ23_t0057 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMULJ23_t0048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0004 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMULJ23_t0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMULJ23_t0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMULJ23_t0062 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMULJ23_t0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMULJ23_t0014 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMULJ23_t0054 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMULJ23_t0011 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMULJ23_t0015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMULJ23_t0053 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMULJ23_t0010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMULJ23_t0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMULJ23_t0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0047 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0028 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0036 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0051 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SMULJ23_t0052 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMULJ23_t0042 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMULJ23_t0002 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMULJ23_t0059 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMULJ23_t0024 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMULJ23_t0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMULJ23_1641 gltX; putative glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SMULJ23_0336 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SMULJ23_0337 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SMULJ23_0335 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SMULJ23_1340 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SMULJ23_0334 aspS; putative aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMULJ23_1851 argS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMULJ23_0744 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SMULJ23_1540 glyQ; putative glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SMULJ23_1539 glyS; putative glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SMULJ23_0540 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SMULJ23_0280 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SMULJ23_0128 cysS; putative cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SMULJ23_0494 metG; putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SMULJ23_1509 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D SMULJ23_0374 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SMULJ23_0234 leuS; putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMULJ23_1431 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SMULJ23_1236 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SMULJ23_1848 argS; putative arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMULJ23_0360 proS; putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SMULJ23_1852 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SMULJ23_0607 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SMULJ23_0609 pheT; putative phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SMULJ23_0188 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMULJ23_1915 trpS; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:smj03060]
D SMULJ23_1753 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SMULJ23_0230 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SMULJ23_0521 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SMULJ23_0356 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SMULJ23_1634 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMULJ23_0411 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMULJ23_0320 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMULJ23_0975 ffh; signal recognition particle protein subunit Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMULJ23_n0003 Bacteria_small_SRP; Signal recognition particle RNA K01983 ffs; SRP RNA
D SMULJ23_1259 ftsY; putative cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SMULJ23_0857 lepB; putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMULJ23_0288 lepC; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMULJ23_1159 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:smj04122]
D SMULJ23_1170 nifS2; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMULJ23_0983 icsS1; iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMULJ23_1902 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SMULJ23_1169 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:smj03018]
D SMULJ23_0806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMULJ23_0125 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SMULJ23_0522 vacB; putative exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SMULJ23_1376 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SMULJ23_1513 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SMULJ23_1608 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SMULJ23_0668 putative ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SMULJ23_0854 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMULJ23_0067 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMULJ23_0225 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:smj03030]
D SMULJ23_0853 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMULJ23_0102 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMULJ23_0544 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMULJ23_0471 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMULJ23_1362 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMULJ23_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMULJ23_1897 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SMULJ23_1193 dnaG; putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SMULJ23_0299 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_0214 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_1037 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SMULJ23_0289 rnh3; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SMULJ23_1670 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMULJ23_0578 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:smj03410]
D SMULJ23_0483 end3; putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SMULJ23_0838 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SMULJ23_0295 mutY; putative A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SMULJ23_1882 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SMULJ23_0517 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SMULJ23_1830 taqI; putative 3-methyladenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SMULJ23_0484 exoA; putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMULJ23_1670 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMULJ23_0645 recJ; putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMULJ23_0578 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:smj03420]
D SMULJ23_0006 trcF; putative transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SMULJ23_0308 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SMULJ23_1204 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SMULJ23_0811 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SMULJ23_0869 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SMULJ23_1670 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMULJ23_0578 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:smj03430]
D SMULJ23_1834 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D SMULJ23_0292 mutS2; putative DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D SMULJ23_1832 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D SMULJ23_0869 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SMULJ23_1406 xseA; putative exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SMULJ23_1405 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SMULJ23_0645 recJ; putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMULJ23_0299 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_0214 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_0853 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMULJ23_0102 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMULJ23_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMULJ23_0544 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMULJ23_1362 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMULJ23_0471 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMULJ23_0578 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SMULJ23_1487 dam; putative site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:smj03440]
D SMULJ23_0645 recJ; putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMULJ23_0299 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_0214 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_1913 recF; recombination protein F recF K03629 recF; DNA replication and repair protein RecF
D SMULJ23_0021 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SMULJ23_1387 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SMULJ23_1828 recA; recombinase A K03553 recA; recombination protein RecA
D SMULJ23_1670 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMULJ23_1831 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SMULJ23_0051 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SMULJ23_0325 recG; putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SMULJ23_0287 recD; putative exodeoxyribonuclease V K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SMULJ23_0853 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMULJ23_0102 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMULJ23_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMULJ23_0544 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMULJ23_1362 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMULJ23_0471 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMULJ23_1510 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:smj03250]
D SMULJ23_0501 cypB; putative peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:smj02010]
D SMULJ23_1339 putative ABC transporter, substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SMULJ23_1337 putative ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D SMULJ23_1338 putative ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SMULJ23_1053 potD; putative ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SMULJ23_1054 potC; putative spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D SMULJ23_1055 potB; putative spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D SMULJ23_1056 potA; putative spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SMULJ23_0973 opuAb; putative ABC transporter, proline/glycine betaine permease protein K02001 proW; glycine betaine/proline transport system permease protein
D SMULJ23_0972 opuAa; putative ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SMULJ23_1880 opuCc; putative ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D SMULJ23_0941 opuBc; putative choline ABC transporter, osmoprotectant binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SMULJ23_1879 opuCb; putative osmoprotectant ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D SMULJ23_1881 opuCd; putative osmoprotectant ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D SMULJ23_1878 opuC; putative osmoprotectant amino acid ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SMULJ23_0940 opuBa; putative ABC transporter, ATP-binding protein, choline transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SMULJ23_1130 msmK; multiple sugar-binding ABC transporter, ATP-binding protein, MsmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SMULJ23_0554 msmK; putative ABC transporter, ATP-binding protein, MsmK-like protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SMULJ23_0557 malX; putative maltose/maltodextrin ABC transporter, sugar-binding protein MalX K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SMULJ23_0556 malF; putative maltose/maltodextrin ABC transporter, MalF permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SMULJ23_0555 malG; putative maltose/maltodextrin ABC transporter, MalG permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SMULJ23_1134 msmE; multiple sugar-binding ABC transporter, sugar-binding protein precursor MsmE K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SMULJ23_1133 msmF; multiple sugar-binding ABC transporter, permease protein MsmF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SMULJ23_1132 msmG; multiple sugar-binding ABC transporter, permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SMULJ23_0918 putative ABC transporter K07335 bmpA; basic membrane protein A and related proteins
D SMULJ23_0920 putative sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SMULJ23_0921 putative ABC sugar transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D SMULJ23_0919 putative sugar ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SMULJ23_0215 putative periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D SMULJ23_0902 pstS; putative ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SMULJ23_0903 pstC1; putative phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D SMULJ23_0904 pstC; putative phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D SMULJ23_0905 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMULJ23_0906 pstB1; putative phosphate ABC transporter ATP-bindingprotein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMULJ23_1206 glnH; putative glutamine ABC transporter, permease protein K10036 glnH; glutamine transport system substrate-binding protein
D SMULJ23_1207 glnQ2; putative glutamine transport ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_0600 putative ABC transporter, glutamine binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D SMULJ23_0598 glnP; putative amino acid ABC transporter, integral membrane protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SMULJ23_0599 putative amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SMULJ23_0601 glnQ; putative amino acid ABC transporter, ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_0836 putative ABC transporter, amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_1528 putative ABC transporter, amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_0235 putative amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_0837 putative amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D SMULJ23_1527 putative amino acid ABC transporter, permease K10009 tcyB; L-cystine transport system permease protein
D SMULJ23_1526 putative amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_1092 putative amino acid ABC transporter, periplasmic amino acid-binding protein K16957 tcyK; L-cystine transport system substrate-binding protein
D SMULJ23_1091 putative amino acid ABC transporter, permease protein K16958 tcyL; L-cystine transport system permease protein
D SMULJ23_1090 putative amino acid ABC transporter, permease K16959 tcyM; L-cystine transport system permease protein
D SMULJ23_1089 putative amino acid ABC transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_1197 aspC; putative amino acid transporter, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMULJ23_1199 putative amino acid transporter, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMULJ23_1425 glnP; putative glutamine ABC transporter, permease component K17077 artQ; arginine/lysine/histidine transport system permease protein
D SMULJ23_1424 glnQ3; glutamine transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_1726 putative amino acid ABC transporter, permease K17073 lysX1; putative lysine transport system substrate-binding protein
D SMULJ23_1727 putative ABC transporter, ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SMULJ23_0464 livK; putative branched chain amino acid ABC transporter ATP binding cassette transporter, binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SMULJ23_0465 livH; putative branched chain amino acid ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D SMULJ23_0466 livM; putative branched chain amino acid ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D SMULJ23_0467 livG; putative branched chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SMULJ23_0468 livF; putative branched chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SMULJ23_0236 atmB; putative membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SMULJ23_0239 putative ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SMULJ23_0238 putative ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SMULJ23_1714 oppA; putative oligopeptide ABC transporter, substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMULJ23_1713 oppB; putative oligopeptide transport system, permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D SMULJ23_1712 oppC; putative transmembrane protein permease OppC K15582 oppC; oligopeptide transport system permease protein
D SMULJ23_1711 oppD; putative oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SMULJ23_1710 oppF; putative oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SMULJ23_0753 adcA; putative surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D SMULJ23_0187 adcB; putative zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D SMULJ23_0186 adcC; putative ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SMULJ23_0177 sloC; ABC transporter sloC K19971 psaA; manganese/zinc transport system substrate-binding protein
D SMULJ23_0176 sloB; putative Mn/Zn ABC transporter sloB K19972 psaC; manganese/zinc transport system permease protein
D SMULJ23_0175 sloA; iron/manganese ABC transporter ATP-binding protein sloA K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D SMULJ23_0330 bioY; putative biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D SMULJ23_0244 cbiQ2; cobalt permease K16785 ecfT; energy-coupling factor transport system permease protein
D SMULJ23_1905 cobalt permease K16785 ecfT; energy-coupling factor transport system permease protein
D SMULJ23_1907 cbiO; cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMULJ23_1906 cbiO; cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMULJ23_1549 putative ABC transporter integral membrane protein K11051 cylB; multidrug/hemolysin transport system permease protein
D SMULJ23_1550 putative ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D SMULJ23_0891 nukK; putative transporter trans-membrane domain bacteriocin immunity protein K20460 nukE; lantibiotic transport system permease protein
D SMULJ23_0890 nukG; putative transporter trans-membrane domain bacteriocin immunity protein K20461 nukG; lantibiotic transport system permease protein
D SMULJ23_0892 bcrA; putative bacitracin transport ATP-binding protein BcrA K20459 nukF; lantibiotic transport system ATP-binding protein
D SMULJ23_1024 putative ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D SMULJ23_1025 mutans bacitracin-resistance related protein A K19083 braD; bacitracin transport system ATP-binding protein
D SMULJ23_0732 ftsX; putative cell-division protein FtsX K09811 ftsX; cell division transport system permease protein
D SMULJ23_0731 ftsE; putative ABC transporter ATP-binding component K09812 ftsE; cell division transport system ATP-binding protein
D SMULJ23_0879 putative ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D SMULJ23_0880 putative ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D SMULJ23_1463 putative ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1462 putative ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_0956 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1114 putative ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1102 putative ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1113 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1101 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_0957 putative ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1683 putative ABC transporter, ATP-binding protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS) [PATH:smj02060]
D SMULJ23_1317 ptsI; phosphoenolpyruvate:sugar phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SMULJ23_1318 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SMULJ23_1793 ptsG; putative PTS system, glucose-specific IIABC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SMULJ23_0317 scrA; putative PTS system sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SMULJ23_1051 bglP; putative PTS system, beta-glucoside-specific EII component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SMULJ23_1786 pttB; putative PTS system, trehalose-specific IIABC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SMULJ23_0861 mtlA2; PTS system, mannitol-specific enzyme IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SMULJ23_0859 mtlA1; PTS system, mannitol-specific enzyme IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SMULJ23_0627 lacF; PTS system lactose-specific enzyme IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SMULJ23_0628 lacE; PTS system lactose-specific enzyme IIBC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SMULJ23_0529 ptcA; putative PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SMULJ23_0527 celB; cellobiose phosphotransferase system IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SMULJ23_0531 ptcC; cellobiose phosphotransferase system IIC component K02761 celB; cellobiose PTS system EIIC component
D SMULJ23_0285 ptnA; putative PTS system mannose-specific component IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SMULJ23_0082 putative sorbose PTS system IIC component K02795 manY; mannose PTS system EIIC component
D SMULJ23_0221 levC; putative PTS system mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SMULJ23_0284 ptnC; putative PTS system mannose-specific component IIC K02795 manY; mannose PTS system EIIC component
D SMULJ23_0083 putative PTS system IID component K02796 manZ; mannose PTS system EIID component
D SMULJ23_0283 putative PTS system mannose-specific component IID K02796 manZ; mannose PTS system EIID component
D SMULJ23_0084 putative PTS system IIA component K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D SMULJ23_0219 levA; putative PTS system sugar-specific enzyme IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SMULJ23_1655 srlB; putative PTS system, sorbitol-specific enzyme IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SMULJ23_1656 srlE; PTS system sorbitol phosphotransferase enzyme IIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D SMULJ23_1657 srlA; PTS system glucitol/sorbitol-specific transporter subunit IIC2 K02783 srlA; glucitol/sorbitol PTS system EIIC component
D SMULJ23_0624 putative PTS family fructose/mannitol porter component IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SMULJ23_0625 putative PTS family fructose/mannitol porter component IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SMULJ23_0626 putative PTS family fructose/mannitol porter component IIC K20114 gatC; galactose PTS system EIIC component
D SMULJ23_1699 ptxA; putative PTS system, enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SMULJ23_1480 putative PTS family porter component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SMULJ23_1700 ptxB; putative PTS system, enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SMULJ23_1479 putative PTS family porter component IIC K03475 ulaA; ascorbate PTS system EIIC component
D SMULJ23_1701 sgaT; PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D SMULJ23_0094 putative PTS system fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMULJ23_1141 fruAB; putative PTS system, fructose-specific enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMULJ23_0095 putative PTS system fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D SMULJ23_1142 pfkB; putative fructose-1-phosphate kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:smj03070]
D SMULJ23_0230 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SMULJ23_0521 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SMULJ23_1753 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SMULJ23_0356 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SMULJ23_1634 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMULJ23_0411 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMULJ23_0320 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMULJ23_1259 ftsY; putative cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SMULJ23_0975 ffh; signal recognition particle protein subunit Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:smj02020]
D SMULJ23_0902 pstS; putative ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SMULJ23_1920 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D SMULJ23_0603 covS; putative histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SMULJ23_0602 covR; putative response regulator CovR K07668 vicR; two-component system, OmpR family, response regulator VicR
D SMULJ23_1026 gtfC; glucosyltransferase-SI K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D SMULJ23_1111 gtfD; glucosyltransferase-S K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D SMULJ23_1027 gtfB; glucosyltransferase-I K00689 E2.4.1.5; dextransucrase [EC:2.4.1.5]
D SMULJ23_0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D SMULJ23_1024 putative ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D SMULJ23_1025 mutans bacitracin-resistance related protein A K19083 braD; bacitracin transport system ATP-binding protein
D SMULJ23_1022 bceS; two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SMULJ23_1023 bceR; two component transcriptional regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SMULJ23_0444 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMULJ23_0445 dltB; putative D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SMULJ23_0446 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMULJ23_0447 dltD; putative extramembranal protein DltD K03740 dltD; D-alanine transfer protein
D SMULJ23_0911 ciaH; putative histidine kinase sensor K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMULJ23_0910 ciaR; putative response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SMULJ23_0061 putative D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMULJ23_0252 gcrR; response regulator GcrR for glucan-binding protein C K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SMULJ23_1333 spaK; putative histidine kinase SpaK K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D SMULJ23_1334 spaR; putative response regulator SpaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D SMULJ23_1021 citC; putative citrate lyase ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D SMULJ23_1013 cilG; citrate lyase subunit gamma K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D SMULJ23_1012 cilB; putative citrate lyase CilB subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D SMULJ23_1011 cilA; putative citrate lyase, alfa subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D SMULJ23_1010 citX; 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA:apo-citrate lyase K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D SMULJ23_1020 citG; triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D SMULJ23_1407 lytS; putative histidine kinase LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SMULJ23_1408 lytR; putative response regulator LytR K07705 lytT; two-component system, LytTR family, response regulator LytT
D SMULJ23_1409 LrgA family protein K05338 lrgA; holin-like protein
D SMULJ23_1410 lrgB; putative murein hydrolase regulator LrgB K05339 lrgB; holin-like protein LrgB
D SMULJ23_0260 comD; putative histidine kinase of the competence regulon ComD K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SMULJ23_0259 comE; putative response regulator of the competence regulon ComE K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SMULJ23_0183 comX1; putative ComX1, transcriptional regulator of competence-specific genes K12296 comX1_2; competence protein ComX
D SMULJ23_0010 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SMULJ23_0574 desK; putative histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SMULJ23_0575 desR; DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D SMULJ23_1504 putative histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SMULJ23_1503 putative response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D SMULJ23_0154 npkK; putative two-component system sensor histidine kinase K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK
D SMULJ23_0476 nrgB; putative nitrogen regulatory protein PII K04751 glnB; nitrogen regulatory protein P-II 1
D SMULJ23_1612 glnA; glutamine synthetase type 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMULJ23_0052 acp1; putative protein tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D SMULJ23_0673 epsC; putative UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:smj02024]
D SMULJ23_1514 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SMULJ23_1415 ycgE; putative S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D SMULJ23_1456 trpE; putative anthranilate synthase subunit alpha K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D SMULJ23_1455 trpG; putative anthranilate synthase subunit beta K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D SMULJ23_0321 aroG; putative DAHP synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMULJ23_0322 aroG; phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D SMULJ23_1706 yrfD; putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D SMULJ23_0464 livK; putative branched chain amino acid ABC transporter ATP binding cassette transporter, binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SMULJ23_0465 livH; putative branched chain amino acid ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D SMULJ23_0466 livM; putative branched chain amino acid ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D SMULJ23_0467 livG; putative branched chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SMULJ23_0468 livF; putative branched chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SMULJ23_0260 comD; putative histidine kinase of the competence regulon ComD K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SMULJ23_0259 comE; putative response regulator of the competence regulon ComE K07707 agrA; two-component system, LytTR family, response regulator AgrA
D SMULJ23_0261 comC; competence stimulating peptide precursor K23133 comC; competence-stimulating peptide
D SMULJ23_0262 hypothetical protein K20323 nlmC; mutacin V
D SMULJ23_1556 hypothetical protein K20324 nlmD; mutacin VI
D SMULJ23_1099 putative immunity protein K20341 blpL; immunity protein
D SMULJ23_0263 putative immunity protein, BLpL-like K20341 blpL; immunity protein
D SMULJ23_0911 ciaH; putative histidine kinase sensor K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMULJ23_0910 ciaR; putative response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SMULJ23_1714 oppA; putative oligopeptide ABC transporter, substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMULJ23_1713 oppB; putative oligopeptide transport system, permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D SMULJ23_1712 oppC; putative transmembrane protein permease OppC K15582 oppC; oligopeptide transport system permease protein
D SMULJ23_1711 oppD; putative oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SMULJ23_1710 oppF; putative oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SMULJ23_0049 putative transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D SMULJ23_0183 comX1; putative ComX1, transcriptional regulator of competence-specific genes K12296 comX1_2; competence protein ComX
D SMULJ23_1683 putative ABC transporter, ATP-binding protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SMULJ23_1682 comB; putative ComB K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SMULJ23_0610 rgg; putative transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D SMULJ23_0623 lacD; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SMULJ23_0096 lacD2; tagatose 1,6-diphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D SMULJ23_1634 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMULJ23_0411 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMULJ23_0230 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SMULJ23_0521 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SMULJ23_1753 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SMULJ23_0356 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SMULJ23_0320 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMULJ23_1259 ftsY; putative cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SMULJ23_0975 ffh; signal recognition particle protein subunit Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMULJ23_1333 spaK; putative histidine kinase SpaK K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D SMULJ23_1334 spaR; putative response regulator SpaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D SMULJ23_0215 putative periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:smj02040]
D SMULJ23_0836 putative ABC transporter, amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_1528 putative ABC transporter, amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_0235 putative amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_1192 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D SMULJ23_0806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:smj01501]
D SMULJ23_0010 hypothetical protein K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D SMULJ23_1714 oppA; putative oligopeptide ABC transporter, substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMULJ23_1713 oppB; putative oligopeptide transport system, permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D SMULJ23_1712 oppC; putative transmembrane protein permease OppC K15582 oppC; oligopeptide transport system permease protein
D SMULJ23_1711 oppD; putative oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SMULJ23_1710 oppF; putative oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SMULJ23_1520 pbp1a; penicillin-binding protein 1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMULJ23_0189 pbp1b; putative membrane carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B
D SMULJ23_0228 pbp2a; putative membrane carboxypeptidase, penicillin-binding protein 2a K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SMULJ23_1388 pbp2b; penicillin-binding protein 2b K00687 pbp2B; penicillin-binding protein 2B
D SMULJ23_1532 pbp2X; putative penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:smj01502]
D SMULJ23_1386 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMULJ23_0324 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SMULJ23_1383 murF; putative D-Ala-D-Ala adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D SMULJ23_1531 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SMULJ23_1440 murG; undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SMULJ23_0061 putative D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:smj01503]
D SMULJ23_1920 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D SMULJ23_0501 cypB; putative peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SMULJ23_0444 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMULJ23_0445 dltB; putative D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SMULJ23_0446 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMULJ23_0447 dltD; putative extramembranal protein DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:smj01000]
C 01001 Protein kinases [BR:smj01001]
D SMULJ23_1506 pknB; putative serine/threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D SMULJ23_0603 covS; putative histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SMULJ23_1022 bceS; two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SMULJ23_0911 ciaH; putative histidine kinase sensor K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMULJ23_1333 spaK; putative histidine kinase SpaK K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D SMULJ23_0574 desK; putative histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SMULJ23_1504 putative histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SMULJ23_0154 npkK; putative two-component system sensor histidine kinase K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK
D SMULJ23_1407 lytS; putative histidine kinase LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SMULJ23_0260 comD; putative histidine kinase of the competence regulon ComD K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:smj01009]
D SMULJ23_0854 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMULJ23_1507 pppL; putative phosphoprotein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D SMULJ23_0782 serB; putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:smj01002]
D SMULJ23_1159 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D SMULJ23_1521 pepC; cysteine aminopeptidase C K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D SMULJ23_0969 guaA; putative GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMULJ23_0825 gat; glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D SMULJ23_0980 putative glutamine amidotransferase K07010 K07010; putative glutamine amidotransferase
D SMULJ23_1683 putative ABC transporter, ATP-binding protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SMULJ23_0018 gbpB; putative secreted antigen GbpB/SagA K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SMULJ23_1609 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SMULJ23_0028 purF; phosphoribosylpyrophosphate amidotransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D SMULJ23_1611 gltA; glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D SMULJ23_0858 glmS; glucosamine-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D SMULJ23_0926 srtA; putative sortase K07284 srtA; sortase A [EC:3.4.22.70]
D SMULJ23_0752 pepD; putative dipeptidase K08659 pepDA; dipeptidase [EC:3.4.-.-]
D SMULJ23_0206 hypothetical protein K07052 K07052; CAAX protease family protein
D SMULJ23_1205 hypothetical protein K07052 K07052; CAAX protease family protein
D SMULJ23_1330 hypothetical protein K07052 K07052; CAAX protease family protein
D SMULJ23_0908 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D SMULJ23_1345 pepB; putative oligopeptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D SMULJ23_1783 pepO; putative peptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D SMULJ23_0061 putative D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMULJ23_0813 pepV; putative dipeptidase K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D SMULJ23_0237 atmC; putative peptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D SMULJ23_1308 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D SMULJ23_1652 hipO3; putative hippurate hydrolase K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D SMULJ23_0567 ampM; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D SMULJ23_0309 pepB; putative aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D SMULJ23_0013 ftsH; putative cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SMULJ23_0208 pepA; putative glutamyl-aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D SMULJ23_0247 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D SMULJ23_0359 membrane-associated Zn-dependent protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D SMULJ23_1920 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D SMULJ23_1715 dacA; putative D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMULJ23_0461 clpP; putative ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D SMULJ23_1582 pepX; x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D SMULJ23_1468 hypothetical protein K07177 K07177; Lon-like protease
D SMULJ23_0857 lepB; putative signal peptidase K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMULJ23_0288 lepC; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D SMULJ23_0728 peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D SMULJ23_1782 mccB; bacteriocin immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SMULJ23_1244 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:smj01003]
D SMULJ23_0538 putative hexosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D SMULJ23_0537 putative hexosyltransferase K13677 dgs; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-glucosyltransferase [EC:2.4.1.208]
D SMULJ23_0584 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D SMULJ23_1520 pbp1a; penicillin-binding protein 1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMULJ23_0189 pbp1b; putative membrane carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B
D SMULJ23_0228 pbp2a; putative membrane carboxypeptidase, penicillin-binding protein 2a K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SMULJ23_1722 rgpG; putative glycosyl transferase N-acetylglucosaminyltransferase RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:smj01005]
D SMULJ23_1188 rgpA; putative RgpAc K12996 rgpA; rhamnosyltransferase [EC:2.4.1.-]
D SMULJ23_1187 rgpB; rhamnosyltransferase K12997 rgpB; rhamnosyltransferase [EC:2.4.1.-]
D SMULJ23_1184 rgpE; glucosyltransferase K12998 rgpE; glucosyltransferase [EC:2.4.1.-]
D SMULJ23_1183 rgpF; RgpFc protein K07272 rgpF; rhamnosyltransferase [EC:2.4.1.-]
D SMULJ23_1810 csbB; putative stress response protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D SMULJ23_1180 putative glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D SMULJ23_1722 rgpG; putative glycosyl transferase N-acetylglucosaminyltransferase RgpG K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D SMULJ23_1190 csbB; putative glycosyl transferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:smj01011]
D SMULJ23_0553 murZ; putative UDP-N-acetylglucosamine-1-carboxyvinyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMULJ23_0595 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D SMULJ23_1057 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D SMULJ23_0407 murC; putative UDP-N-acetyl muramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D SMULJ23_1441 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D SMULJ23_0456 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--L-lysine ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D SMULJ23_1386 ddl; D-alanyl-alanine synthetase A K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D SMULJ23_1281 murM; putative peptidoglycan branched peptide synthesis protein K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D SMULJ23_1282 murN; putative peptidoglycan branched peptide synthesis protein K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D SMULJ23_0324 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D SMULJ23_0418 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D SMULJ23_1782 mccB; bacteriocin immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D SMULJ23_1531 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D SMULJ23_1440 murG; undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D SMULJ23_1724 uppP; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMULJ23_0434 putative phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D SMULJ23_1520 pbp1a; penicillin-binding protein 1a K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D SMULJ23_0189 pbp1b; putative membrane carboxypeptidase K03693 pbp1b; penicillin-binding protein 1B
D SMULJ23_0228 pbp2a; putative membrane carboxypeptidase, penicillin-binding protein 2a K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D SMULJ23_1388 pbp2b; penicillin-binding protein 2b K00687 pbp2B; penicillin-binding protein 2B
D SMULJ23_1532 pbp2X; putative penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
D SMULJ23_1715 dacA; putative D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D SMULJ23_0061 putative D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMULJ23_0018 gbpB; putative secreted antigen GbpB/SagA K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SMULJ23_1609 hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D SMULJ23_0926 srtA; putative sortase K07284 srtA; sortase A [EC:3.4.22.70]
D SMULJ23_0409 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:smj01004]
D SMULJ23_0397 fabD; acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMULJ23_0157 pksA; putative PKS acyl-CoA transferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D SMULJ23_0394 fabH; 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D SMULJ23_0399 fabF; 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D SMULJ23_0398 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D SMULJ23_0401 fabZ; putative 3-hydroxymyristoyl-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D SMULJ23_0396 fabK; putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D SMULJ23_0392 phaB; enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D SMULJ23_0022 plsX; putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D SMULJ23_0841 plsY; putative glycerol-3-phosphate acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D SMULJ23_1366 putative 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:smj01008]
C 01006 Prenyltransferases [BR:smj01006]
D SMULJ23_1404 ispA; putative farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D SMULJ23_0357 uppS; undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D SMULJ23_0640 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:smj01007]
D SMULJ23_1641 gltX; putative glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SMULJ23_0188 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMULJ23_1915 trpS; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SMULJ23_0128 cysS; putative cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SMULJ23_1848 argS; putative arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMULJ23_0494 metG; putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SMULJ23_1431 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SMULJ23_0374 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SMULJ23_0234 leuS; putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMULJ23_1236 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SMULJ23_0334 aspS; putative aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMULJ23_1851 argS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMULJ23_0744 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SMULJ23_1852 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SMULJ23_1540 glyQ; putative glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SMULJ23_1539 glyS; putative glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SMULJ23_0280 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SMULJ23_0360 proS; putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SMULJ23_0540 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SMULJ23_1340 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SMULJ23_0607 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SMULJ23_0609 pheT; putative phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SMULJ23_0331 yfbQ; aminotransferase AlaT K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D SMULJ23_0020 aspC; aromatic amino acid aminotransferase K00841 patA; aminotransferase [EC:2.6.1.-]
D SMULJ23_0778 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D SMULJ23_0459 metC; putative aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D SMULJ23_1326 argD; putative N-acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D SMULJ23_0845 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D SMULJ23_0477 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:smj00194]
D SMULJ23_0593 atpC; F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D SMULJ23_0592 atpB; F0F1 membrane-bound proton-translocating ATPase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D SMULJ23_0591 atpC; F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D SMULJ23_0590 atpD; F0F1 membrane-bound proton-translocating ATPase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D SMULJ23_0589 atpE; F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D SMULJ23_0588 atpF; F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D SMULJ23_0586 atpH; F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D SMULJ23_0587 atpG; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:smj03000]
D SMULJ23_1136 msmR; putative MSM operon regulatory protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D SMULJ23_1804 LysR family transcriptional regulator K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D SMULJ23_0619 lacR; lactose repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D SMULJ23_1143 fruR; putative transcriptional regulator of sugar metabolism K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D SMULJ23_1484 putative transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D SMULJ23_1128 galR; galactose operon repressor GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMULJ23_0535 ccpA; catabolite control protein A CcpA K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMULJ23_0558 malR; maltose operon transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D SMULJ23_0315 scrR; sucrose operon repressor K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D SMULJ23_0086 putative transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D SMULJ23_1787 treR; putative transcriptional regulator K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D SMULJ23_0970 GntR family transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D SMULJ23_1005 putative transcription regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D SMULJ23_1613 glnR; transcriptional regulator K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D SMULJ23_0768 putative transcriptional regulator K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator
D SMULJ23_1392 furR; putative ferric uptake regulator protein FurR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D SMULJ23_1844 hypothetical protein K21828 arcR; CRP/FNR family transcriptional regulator, arginine deiminase pathway regulator
D SMULJ23_0121 putative transcriptional regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D SMULJ23_0486 putative transcriptional regulator K26993 sdpR; ArsR family transcriptional regulator, repressor of sdpIR and other operons
D SMULJ23_0432 hypothetical protein K10947 K10947; PadR family transcriptional regulator
D SMULJ23_0179 sloR; putative metal-dependent transcriptional regulator SloR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D SMULJ23_0546 birA; putative biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D SMULJ23_0049 putative transcriptional regulator K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D SMULJ23_0610 rgg; putative transcriptional regulator K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D SMULJ23_1620 purR; purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D SMULJ23_0981 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D SMULJ23_0332 codY; transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D SMULJ23_0204 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D SMULJ23_0138 transcriptional regulator, Cro/CI family K07729 K07729; putative transcriptional regulator
D SMULJ23_1331 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D SMULJ23_1052 licT; putative transcriptional antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator
D SMULJ23_1681 putative transcriptional regulator K03493 bglG1; transcriptional antiterminator
D SMULJ23_0860 putative transcriptional regulator K03483 mtlR; mannitol operon transcriptional activator
D SMULJ23_1481 transcriptional antiterminator K03483 mtlR; mannitol operon transcriptional activator
D SMULJ23_0528 celR; putative transcriptional regulator K03491 licR; probable licABCH operon transcriptional regulator
D SMULJ23_1921 spoJ; putative SpoJ K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMULJ23_1847 partial arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SMULJ23_1836 argR; putative transcriptional regulator of arginine metabolism K03402 argR; transcriptional regulator of arginine metabolism
D SMULJ23_1402 argR; putative arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D SMULJ23_0065 hrcA; transcriptional regulator K03705 hrcA; heat-inducible transcriptional repressor
D SMULJ23_1778 ctsR; putative transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D SMULJ23_1156 pyrR; bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D SMULJ23_0253 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D SMULJ23_0183 comX1; putative ComX1, transcriptional regulator of competence-specific genes K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:smj03021]
D SMULJ23_1747 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SMULJ23_0190 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SMULJ23_0191 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SMULJ23_0077 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SMULJ23_1511 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SMULJ23_1192 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D SMULJ23_1561 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SMULJ23_0314 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D SMULJ23_0231 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SMULJ23_0410 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:smj03019]
D SMULJ23_0605 rncS; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SMULJ23_1608 hypothetical protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SMULJ23_0668 putative ribonuclease K12574 rnj; ribonuclease J [EC:3.1.-.-]
D SMULJ23_1513 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D SMULJ23_0522 vacB; putative exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SMULJ23_1621 cbf; putative CMP-binding factor K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D SMULJ23_1376 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SMULJ23_1529 rheB; putative ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SMULJ23_0806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMULJ23_0125 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D SMULJ23_0854 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D SMULJ23_0067 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMULJ23_0225 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMULJ23_0749 putative ATP-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:smj03011]
D SMULJ23_0847 rs1; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D SMULJ23_1780 rs2; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D SMULJ23_1767 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D SMULJ23_1894 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D SMULJ23_1756 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D SMULJ23_0298 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D SMULJ23_1618 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D SMULJ23_1759 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D SMULJ23_0140 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D SMULJ23_1774 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D SMULJ23_1748 rs11; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D SMULJ23_1619 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D SMULJ23_1749 rs13; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D SMULJ23_1760 rs14; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SMULJ23_0147 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D SMULJ23_0124 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D SMULJ23_1148 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D SMULJ23_1764 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D SMULJ23_0300 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D SMULJ23_1769 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D SMULJ23_0912 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D SMULJ23_1196 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D SMULJ23_0505 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D SMULJ23_1770 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D SMULJ23_1773 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D SMULJ23_1772 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D SMULJ23_1761 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D SMULJ23_1758 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D SMULJ23_1898 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D SMULJ23_1069 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D SMULJ23_0504 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D SMULJ23_1068 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D SMULJ23_0139 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D SMULJ23_1763 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D SMULJ23_1754 rl15; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D SMULJ23_1766 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D SMULJ23_1746 rl17; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D SMULJ23_1757 rl18; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D SMULJ23_0767 rl19; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D SMULJ23_1301 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D SMULJ23_1165 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D SMULJ23_1768 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D SMULJ23_1771 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D SMULJ23_1762 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D SMULJ23_1163 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D SMULJ23_0100 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D SMULJ23_1765 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D SMULJ23_1755 rl30; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D SMULJ23_0757 rl31; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D SMULJ23_1854 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D SMULJ23_0229 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SMULJ23_1855 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SMULJ23_0520 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D SMULJ23_1631 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D SMULJ23_1302 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D SMULJ23_1750 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D SMULJ23_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:smj03009]
D SMULJ23_0605 rncS; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SMULJ23_0514 era; GTP-binding protein K03595 era; GTPase
D SMULJ23_1210 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D SMULJ23_1561 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D SMULJ23_0314 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D SMULJ23_0231 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D SMULJ23_1352 rsuA1; putative 16S pseudouridylate synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D SMULJ23_1627 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D SMULJ23_1508 sunL; putative RNA-binding Sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D SMULJ23_0914 hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D SMULJ23_1470 rsmD; putative ribosomal RNA small subunit methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D SMULJ23_1795 rsmE; 16S ribosomal RNA methyltransferase RsmE K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D SMULJ23_0245 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SMULJ23_1534 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D SMULJ23_0474 putative methylase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D SMULJ23_1403 hlyA1; putative hemolysin K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D SMULJ23_0134 putative tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D SMULJ23_1919 rRNA large subunit methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D SMULJ23_1233 putative methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D SMULJ23_1465 rlmN; ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D SMULJ23_1222 putative RNA methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D SMULJ23_0425 rluB; putative pseudouridylate synthase B large subunit K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D SMULJ23_1158 rluD; putative pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SMULJ23_0227 putative pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SMULJ23_0988 rluD; putative pseudouridylate synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D SMULJ23_1599 rimI; putative ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D SMULJ23_1146 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D SMULJ23_1796 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D SMULJ23_1822 ruvX; Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D SMULJ23_0129 hypothetical protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D SMULJ23_1376 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D SMULJ23_1529 rheB; putative ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D SMULJ23_1625 engC; ribosome-associated GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D SMULJ23_0256 engA; phosphoglycerate dehydrogenase K03977 engA; GTPase
D SMULJ23_1038 rbgA; ribosomal biogenesis GTPase K14540 rbgA; ribosome biogenesis GTPase A
D SMULJ23_0641 hflX; putative GTP-binding protein K03665 hflX; GTPase
D SMULJ23_0344 yqeH; putative GTP-binding protein K06948 yqeH; 30S ribosome assembly GTPase
D SMULJ23_0952 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SMULJ23_1791 relA; putative stringent response protein, ppGpp synthetase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D SMULJ23_1557 rbfA; ribosome binding factor A K02834 rbfA; ribosome-binding factor A
D SMULJ23_1562 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D SMULJ23_1912 hypothetical protein K14761 rlbA; ribosome-associated protein
D SMULJ23_0348 hypothetical protein K09710 ybeB; ribosome-associated protein
D SMULJ23_0512 putative metalloprotease K07042 ybeY; probable rRNA maturation factor
D SMULJ23_0345 hypothetical protein K07574 yhbY; RNA-binding protein
D SMULJ23_1491 yfiA; putative ribosome-associated protein K05808 hpf; ribosome hibernation promoting factor
D SMULJ23_0004 engD; putative GTP-binding protein K06942 ychF; ribosome-binding ATPase
D SMULJ23_0251 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:smj03016]
D SMULJ23_0643 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D SMULJ23_1117 papS; tRNA CCA-pyrophosphorylase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D SMULJ23_0360 proS; putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D SMULJ23_1431 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D SMULJ23_0234 leuS; putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMULJ23_0494 metG; putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D SMULJ23_1848 argS; putative arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMULJ23_1236 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D SMULJ23_0334 aspS; putative aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMULJ23_1851 argS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMULJ23_1340 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D SMULJ23_0744 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D SMULJ23_0540 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D SMULJ23_0280 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D SMULJ23_0128 cysS; putative cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D SMULJ23_0374 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D SMULJ23_1852 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D SMULJ23_0607 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D SMULJ23_0609 pheT; putative phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D SMULJ23_0188 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMULJ23_1915 trpS; tryptophanyl-tRNA synthetase II K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D SMULJ23_1790 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D SMULJ23_1567 putative Hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SMULJ23_1563 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D SMULJ23_0069 truA; putative tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D SMULJ23_0896 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D SMULJ23_1170 nifS2; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMULJ23_0983 icsS1; iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMULJ23_0952 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D SMULJ23_0640 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D SMULJ23_0818 thdF; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D SMULJ23_1900 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SMULJ23_1635 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D SMULJ23_n0002 RNaseP_bact_b K01978 rnpB; M1 RNA
D SMULJ23_1540 glyQ; putative glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D SMULJ23_1539 glyS; putative glycyl-tRNA synthetase beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D SMULJ23_1641 gltX; putative glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D SMULJ23_1298 putative transcriptional regulator K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D SMULJ23_1663 putative deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D SMULJ23_0180 hypothetical protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D SMULJ23_1028 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SMULJ23_1145 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D SMULJ23_0651 hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D SMULJ23_0429 putative rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D SMULJ23_0413 spoU; putative rRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D SMULJ23_1902 mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D SMULJ23_1356 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D SMULJ23_1104 queC; putative aluminium resistance ATPase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D SMULJ23_1105 ptpS; putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D SMULJ23_1106 hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D SMULJ23_1107 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D SMULJ23_0729 4Fe-4S ferredoxin K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D SMULJ23_1667 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D SMULJ23_1169 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D SMULJ23_0011 putative cell-cycle protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D SMULJ23_1600 gpp; putative glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D SMULJ23_1598 gcp; putative DNA-binding/iron metalloprotein/AP endonuclease K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D SMULJ23_1570 putative hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D SMULJ23_0352 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D SMULJ23_0522 vacB; putative exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D SMULJ23_0125 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:smj03012]
D SMULJ23_1558 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SMULJ23_1303 infC; putative translation initiation factor IF3 K02520 infC; translation initiation factor IF-3
D SMULJ23_0678 putative ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D SMULJ23_1779 tsf; putative translation elongation factor TS K02357 tsf; elongation factor Ts
D SMULJ23_1289 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D SMULJ23_1617 fusA; elongation factor G K02355 fusA; elongation factor G
D SMULJ23_0950 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D SMULJ23_0507 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D SMULJ23_0951 hemK; putative protoporphyrinogen oxidase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D SMULJ23_0005 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D SMULJ23_1751 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D SMULJ23_0312 efp; elongation factor P K02356 efp; elongation factor P
D SMULJ23_0730 ft2; putative peptide chain release factor K02836 prfB; peptide chain release factor 2
D SMULJ23_1379 regulator of gtfB K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:smj03110]
D SMULJ23_0684 clpB; putative Clp proteinase ATP-binding subunit ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D SMULJ23_1777 clpC; class III stress response-related ATP-dependent Clp protease, ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D SMULJ23_1428 clpE; ATP-dependent protease ClpE K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D SMULJ23_1070 clp; putative Clp-like ATP-dependent protease, ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D SMULJ23_1077 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D SMULJ23_0067 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMULJ23_0225 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMULJ23_0068 dnaJ; heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SMULJ23_0181 hslO; Hsp33-like chaperonin K04083 hslO; molecular chaperone Hsp33
D SMULJ23_0066 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SMULJ23_0224 groES; putative co-chaperonin GroES K04078 groES; chaperonin GroES
D SMULJ23_1920 htrA; serine protease HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D SMULJ23_0013 ftsH; putative cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D SMULJ23_0587 atpG; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D SMULJ23_0501 cypB; putative peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SMULJ23_1502 putative hydrolase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D SMULJ23_1342 prsA; foldase protein PrsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D SMULJ23_0293 trxA; putative thioredoxin K03671 TXN; thioredoxin
D SMULJ23_0144 trxA; thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:smj04131]
D SMULJ23_1616 gapC; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMULJ23_1414 gapC; putative glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMULJ23_1389 pmgY; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D SMULJ23_0855 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:smj03032]
D SMULJ23_1397 hup; putative DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SMULJ23_0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D SMULJ23_1897 dnaC; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D SMULJ23_1193 dnaG; putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D SMULJ23_0254 dnaB; putative chromosome replication protein K03346 dnaB; replication initiation and membrane attachment protein
D SMULJ23_0255 dnaI; putative DNA replication protein K11144 dnaI; primosomal protein DnaI
D SMULJ23_0299 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_0214 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_0853 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMULJ23_0102 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMULJ23_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMULJ23_1362 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMULJ23_0471 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMULJ23_0544 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMULJ23_1037 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D SMULJ23_0289 rnh3; ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D SMULJ23_1670 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMULJ23_0578 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SMULJ23_1487 dam; putative site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SMULJ23_0925 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SMULJ23_0775 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SMULJ23_0844 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SMULJ23_0842 parE; putative DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SMULJ23_1029 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:smj03036]
D SMULJ23_0605 rncS; putative ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D SMULJ23_1397 hup; putative DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SMULJ23_0001 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein
D SMULJ23_1448 dpr; peroxide resistance protein K04047 dps; starvation-inducible DNA-binding protein
D SMULJ23_0606 smc; putative chromosome segregation ATPase K03529 smc; chromosome segregation protein
D SMULJ23_0423 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D SMULJ23_0424 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D SMULJ23_1438 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SMULJ23_0008 hypothetical protein K13052 divIC; cell division protein DivIC
D SMULJ23_0731 ftsE; putative ABC transporter ATP-binding component K09812 ftsE; cell division transport system ATP-binding protein
D SMULJ23_0502 putative cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D SMULJ23_1533 ftsL; putative cell division protein K03586 ftsL; cell division protein FtsL
D SMULJ23_1439 ftsQ; putative cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D SMULJ23_1290 ftsW; putative cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SMULJ23_0732 ftsX; putative cell-division protein FtsX K09811 ftsX; cell division transport system permease protein
D SMULJ23_1437 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SMULJ23_0776 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D SMULJ23_1432 divIVA; putative cell division protein DivIVA K04074 divIVA; cell division initiation protein
D SMULJ23_1435 ylmF; hypothetical protein K09772 sepF; cell division inhibitor SepF
D SMULJ23_0016 mreC; putative cell shape-determining protein K03570 mreC; rod shape-determining protein MreC
D SMULJ23_0017 mreD; putative cell shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D SMULJ23_0773 rodA; putative cell division protein K05837 rodA; rod shape determining protein RodA
D SMULJ23_1921 spoJ; putative SpoJ K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D SMULJ23_0844 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SMULJ23_0842 parE; putative DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SMULJ23_1900 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D SMULJ23_0245 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D SMULJ23_1028 gid; tRNA (uracil-5-)-methyltransferase Gid K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D SMULJ23_1076 engB; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D SMULJ23_0751 hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:smj03400]
D SMULJ23_0481 ogt; putative methylated-DNA--protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D SMULJ23_0838 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D SMULJ23_1882 putative 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D SMULJ23_0295 mutY; putative A/G-specific DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D SMULJ23_0483 end3; putative endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D SMULJ23_0658 mutX; mutator protein MutX K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMULJ23_1200 mutT; putative MutT-like protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMULJ23_1429 MutT family hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D SMULJ23_1646 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D SMULJ23_1830 taqI; putative 3-methyladenine DNA glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D SMULJ23_0517 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D SMULJ23_0484 exoA; putative exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D SMULJ23_0645 recJ; putative single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D SMULJ23_0578 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D SMULJ23_1670 polI; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D SMULJ23_0308 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D SMULJ23_1204 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D SMULJ23_0811 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D SMULJ23_0869 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D SMULJ23_0190 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D SMULJ23_0191 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D SMULJ23_1747 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D SMULJ23_0077 rpoE; DNA-directed RNA polymerase subunit delta K03048 rpoE; DNA-directed RNA polymerase subunit delta
D SMULJ23_1511 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D SMULJ23_0006 trcF; putative transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D SMULJ23_1834 mutS; DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS
D SMULJ23_0292 mutS2; putative DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D SMULJ23_1832 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D SMULJ23_1406 xseA; putative exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D SMULJ23_1405 xseB; exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D SMULJ23_0853 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D SMULJ23_0102 polC; DNA polymerase III subunit alpha K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D SMULJ23_0002 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D SMULJ23_1362 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D SMULJ23_0471 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D SMULJ23_0544 dnaX; DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D SMULJ23_0299 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_0214 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_1487 dam; putative site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SMULJ23_0287 recD; putative exodeoxyribonuclease V K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D SMULJ23_1828 recA; recombinase A K03553 recA; recombination protein RecA
D SMULJ23_1831 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D SMULJ23_0051 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D SMULJ23_1510 priA; primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D SMULJ23_1644 radA; putative DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D SMULJ23_1913 recF; recombination protein F recF K03629 recF; DNA replication and repair protein RecF
D SMULJ23_0325 recG; putative ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D SMULJ23_0021 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D SMULJ23_1387 recR; recombination protein RecR K06187 recR; recombination protein RecR
D SMULJ23_1401 recN; DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D SMULJ23_1519 recU; Holliday junction-specific endonuclease K03700 recU; recombination protein U
D SMULJ23_0618 rexA; putative exonuclease RexA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D SMULJ23_0617 rexB; putative exonuclease RexB K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D SMULJ23_0384 cas1; CRISPR-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D SMULJ23_0702 cas1; CRISPR-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D SMULJ23_0925 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D SMULJ23_0775 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D SMULJ23_1029 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D SMULJ23_1397 hup; putative DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D SMULJ23_1576 dinP; putative DNA-damage-inducible protein P K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D SMULJ23_0363 recX; RecA regulator K03565 recX; regulatory protein
D SMULJ23_0742 putative ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D SMULJ23_1324 nrdE2; ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D SMULJ23_1325 nrdG; ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D SMULJ23_0758 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:smj03029]
D SMULJ23_1558 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D SMULJ23_1303 infC; putative translation initiation factor IF3 K02520 infC; translation initiation factor IF-3
D SMULJ23_1779 tsf; putative translation elongation factor TS K02357 tsf; elongation factor Ts
D SMULJ23_1289 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D SMULJ23_1617 fusA; elongation factor G K02355 fusA; elongation factor G
D SMULJ23_0514 era; GTP-binding protein K03595 era; GTPase
D SMULJ23_0188 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D SMULJ23_0234 leuS; putative leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D SMULJ23_0334 aspS; putative aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMULJ23_1851 argS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D SMULJ23_1848 argS; putative arginyl-tRNA synthase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D SMULJ23_0336 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D SMULJ23_0337 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D SMULJ23_0335 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D SMULJ23_0299 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_0214 ssb2; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D SMULJ23_0067 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMULJ23_0066 grpE; heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D SMULJ23_0225 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMULJ23_0224 groES; putative co-chaperonin GroES K04078 groES; chaperonin GroES
D SMULJ23_0068 dnaJ; heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D SMULJ23_1170 nifS2; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMULJ23_0983 icsS1; iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMULJ23_1634 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMULJ23_0411 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:smj02000]
D SMULJ23_0879 putative ABC transporter ATP-binding protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D SMULJ23_0880 putative ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D SMULJ23_1463 putative ABC transporter ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1462 putative ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_0956 putative ABC transporter ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1114 putative ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1102 putative ABC transporter, ATP-binding protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1113 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_1101 putative ABC transporter ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_0957 putative ABC transporter, ATP-binding protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D SMULJ23_0024 putative ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SMULJ23_1284 multidrug resistance ABC transporter ATPase andpermease components K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D SMULJ23_1683 putative ABC transporter, ATP-binding protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D SMULJ23_1116 putative ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D SMULJ23_1339 putative ABC transporter, substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D SMULJ23_1337 putative ABC transporter, permease protein K15554 ssuC; sulfonate transport system permease protein
D SMULJ23_1338 putative ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D SMULJ23_1053 potD; putative ABC transporter, periplasmic spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D SMULJ23_1054 potC; putative spermidine/putrescine ABC transporter permease K11070 potC; spermidine/putrescine transport system permease protein
D SMULJ23_1055 potB; putative spermidine/putrescine ABC transporter permease K11071 potB; spermidine/putrescine transport system permease protein
D SMULJ23_1056 potA; putative spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D SMULJ23_0973 opuAb; putative ABC transporter, proline/glycine betaine permease protein K02001 proW; glycine betaine/proline transport system permease protein
D SMULJ23_0972 opuAa; putative ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D SMULJ23_1880 opuCc; putative ABC transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D SMULJ23_0941 opuBc; putative choline ABC transporter, osmoprotectant binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D SMULJ23_1879 opuCb; putative osmoprotectant ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D SMULJ23_1881 opuCd; putative osmoprotectant ABC transporter K05846 opuBD; osmoprotectant transport system permease protein
D SMULJ23_1878 opuC; putative osmoprotectant amino acid ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SMULJ23_0940 opuBa; putative ABC transporter, ATP-binding protein, choline transporter K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D SMULJ23_1130 msmK; multiple sugar-binding ABC transporter, ATP-binding protein, MsmK K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SMULJ23_0554 msmK; putative ABC transporter, ATP-binding protein, MsmK-like protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D SMULJ23_0557 malX; putative maltose/maltodextrin ABC transporter, sugar-binding protein MalX K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D SMULJ23_0556 malF; putative maltose/maltodextrin ABC transporter, MalF permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SMULJ23_0555 malG; putative maltose/maltodextrin ABC transporter, MalG permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D SMULJ23_1134 msmE; multiple sugar-binding ABC transporter, sugar-binding protein precursor MsmE K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D SMULJ23_1133 msmF; multiple sugar-binding ABC transporter, permease protein MsmF K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D SMULJ23_1132 msmG; multiple sugar-binding ABC transporter, permease protein MsmG K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D SMULJ23_0215 putative periplasmic sugar-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D SMULJ23_0918 putative ABC transporter K07335 bmpA; basic membrane protein A and related proteins
D SMULJ23_0920 putative sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D SMULJ23_0921 putative ABC sugar transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D SMULJ23_0919 putative sugar ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D SMULJ23_0218 putative sugar-binding periplasmic protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D SMULJ23_0902 pstS; putative ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D SMULJ23_0903 pstC1; putative phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D SMULJ23_0904 pstC; putative phosphate ABC transporter, permease protein K02038 pstA; phosphate transport system permease protein
D SMULJ23_0905 pstB; phosphate transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMULJ23_0906 pstB1; putative phosphate ABC transporter ATP-bindingprotein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D SMULJ23_1206 glnH; putative glutamine ABC transporter, permease protein K10036 glnH; glutamine transport system substrate-binding protein
D SMULJ23_1207 glnQ2; putative glutamine transport ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_0600 putative ABC transporter, glutamine binding protein K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D SMULJ23_0598 glnP; putative amino acid ABC transporter, integral membrane protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SMULJ23_0599 putative amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D SMULJ23_0601 glnQ; putative amino acid ABC transporter, ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_0836 putative ABC transporter, amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_1528 putative ABC transporter, amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_0235 putative amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_0837 putative amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D SMULJ23_1527 putative amino acid ABC transporter, permease K10009 tcyB; L-cystine transport system permease protein
D SMULJ23_1526 putative amino acid ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_1092 putative amino acid ABC transporter, periplasmic amino acid-binding protein K16957 tcyK; L-cystine transport system substrate-binding protein
D SMULJ23_1091 putative amino acid ABC transporter, permease protein K16958 tcyL; L-cystine transport system permease protein
D SMULJ23_1090 putative amino acid ABC transporter, permease K16959 tcyM; L-cystine transport system permease protein
D SMULJ23_1089 putative amino acid ABC transporter, ATP-binding protein K16960 tcyN; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_1197 aspC; putative amino acid transporter, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMULJ23_1199 putative amino acid transporter, amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D SMULJ23_1425 glnP; putative glutamine ABC transporter, permease component K17077 artQ; arginine/lysine/histidine transport system permease protein
D SMULJ23_1424 glnQ3; glutamine transporter ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_0464 livK; putative branched chain amino acid ABC transporter ATP binding cassette transporter, binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D SMULJ23_0465 livH; putative branched chain amino acid ABC transporter permease protein K01997 livH; branched-chain amino acid transport system permease protein
D SMULJ23_0466 livM; putative branched chain amino acid ABC transporter permease protein K01998 livM; branched-chain amino acid transport system permease protein
D SMULJ23_0467 livG; putative branched chain amino acid ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D SMULJ23_0468 livF; putative branched chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D SMULJ23_0236 atmB; putative membrane lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D SMULJ23_0239 putative ABC transporter permease protein K02072 metI; D-methionine transport system permease protein
D SMULJ23_0238 putative ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D SMULJ23_0665 putative ABC superfamily ATP binding cassette transporter, binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D SMULJ23_0666 putative ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D SMULJ23_0667 putative ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D SMULJ23_1726 putative amino acid ABC transporter, permease K17073 lysX1; putative lysine transport system substrate-binding protein
D SMULJ23_1727 putative ABC transporter, ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D SMULJ23_0866 putative ABC transporter, glutamine binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D SMULJ23_0864 putative amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D SMULJ23_0865 putative amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D SMULJ23_1714 oppA; putative oligopeptide ABC transporter, substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein
D SMULJ23_1713 oppB; putative oligopeptide transport system, permease protein OppB K15581 oppB; oligopeptide transport system permease protein
D SMULJ23_1712 oppC; putative transmembrane protein permease OppC K15582 oppC; oligopeptide transport system permease protein
D SMULJ23_1711 oppD; putative oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein
D SMULJ23_1710 oppF; putative oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein
D SMULJ23_1033 putative ABC transporter periplasmic ferrichrome-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D SMULJ23_1035 fatC; ferrichrome ABC transporter permease protein K25283 yclO; iron-siderophore transport system permease protein
D SMULJ23_1036 yclN; ferrichrome ABC transporter permease protein K25284 yclN; iron-siderophore transport system permease protein
D SMULJ23_1034 yclP; putative ferrichrome ABC transporter ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D SMULJ23_0439 putative ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D SMULJ23_0753 adcA; putative surface adhesin K09815 znuA; zinc transport system substrate-binding protein
D SMULJ23_0187 adcB; putative zinc ABC transporter permease K09816 znuB; zinc transport system permease protein
D SMULJ23_0186 adcC; putative ABC transporter ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D SMULJ23_0177 sloC; ABC transporter sloC K19971 psaA; manganese/zinc transport system substrate-binding protein
D SMULJ23_0176 sloB; putative Mn/Zn ABC transporter sloB K19972 psaC; manganese/zinc transport system permease protein
D SMULJ23_0175 sloA; iron/manganese ABC transporter ATP-binding protein sloA K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D SMULJ23_0330 bioY; putative biotin biosynthesis protein K03523 bioY; biotin transport system substrate-specific component
D SMULJ23_0242 hypothetical protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D SMULJ23_1293 hypothetical protein K16927 cbrT; energy-coupling factor transport system substrate-specific component
D SMULJ23_0244 cbiQ2; cobalt permease K16785 ecfT; energy-coupling factor transport system permease protein
D SMULJ23_1905 cobalt permease K16785 ecfT; energy-coupling factor transport system permease protein
D SMULJ23_1907 cbiO; cobalt transporter ATP-binding subunit K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMULJ23_1906 cbiO; cobalt transporter ATP-binding subunit K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMULJ23_0243 cbiO; putative cobalt ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D SMULJ23_1549 putative ABC transporter integral membrane protein K11051 cylB; multidrug/hemolysin transport system permease protein
D SMULJ23_1550 putative ABC transporter ATP-binding protein K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D SMULJ23_0892 bcrA; putative bacitracin transport ATP-binding protein BcrA K20459 nukF; lantibiotic transport system ATP-binding protein
D SMULJ23_0891 nukK; putative transporter trans-membrane domain bacteriocin immunity protein K20460 nukE; lantibiotic transport system permease protein
D SMULJ23_0890 nukG; putative transporter trans-membrane domain bacteriocin immunity protein K20461 nukG; lantibiotic transport system permease protein
D SMULJ23_1024 putative ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D SMULJ23_1025 mutans bacitracin-resistance related protein A K19083 braD; bacitracin transport system ATP-binding protein
D SMULJ23_0968 putative ABC transporter permease K25147 berB; beta-exotoxin I transport system permease protein
D SMULJ23_0967 putative ABC transporter ATP-binding protein K25148 berA; beta-exotoxin I transport system ATP-binding protein
D SMULJ23_1149 putative ABC transporter, permease component K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D SMULJ23_1150 putative ABC transporter, ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D SMULJ23_0732 ftsX; putative cell-division protein FtsX K09811 ftsX; cell division transport system permease protein
D SMULJ23_0731 ftsE; putative ABC transporter ATP-binding component K09812 ftsE; cell division transport system ATP-binding protein
D SMULJ23_1565 putative ABC transporter permease K25157 ecsB; ABC-2 type transport system permease protein
D SMULJ23_1566 putative ABC transporter, ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D SMULJ23_1730 putative integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_0990 putative ABC transporter permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_0739 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_1121 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_1186 rgpC; putative polysaccharide ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_1605 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_0161 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_0573 putative ABC-type multidrug transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_0996 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_1336 mutG; putative antibiotic ABC transporter protein MutG K01992 ABC-2.P; ABC-2 type transport system permease protein
D SMULJ23_1729 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_0997 glrA; putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_1122 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_1185 rgpD; putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_0851 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_0740 putative ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_1270 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_0991 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_0160 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_0572 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_1606 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D SMULJ23_0696 putative ABC transporter, membrane protein subunit and ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMULJ23_1861 putative ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SMULJ23_0943 yijC; putative ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D SMULJ23_0248 psaB; putative ABC transporter permease protein PsaB K02004 ABC.CD.P; putative ABC transport system permease protein
D SMULJ23_0877 putative ABC transporter permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D SMULJ23_1862 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMULJ23_0942 yijD; putative ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMULJ23_0249 putative ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMULJ23_0876 putative ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D SMULJ23_1721 putative ABC transporter, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D SMULJ23_0101 dinF; putative DinF, damage-inducible protein K26937 dinF; MATE family, multidrug efflux pump
D SMULJ23_0057 norN; putative cation efflux pump K26937 dinF; MATE family, multidrug efflux pump
D SMULJ23_0613 putative transporter K26937 dinF; MATE family, multidrug efflux pump
D SMULJ23_1863 putative multidrug-resistance efflux pump K26937 dinF; MATE family, multidrug efflux pump
D SMULJ23_0519 putative permease K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D SMULJ23_1258 lmrB; putative drug-export protein K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein
D SMULJ23_1317 ptsI; phosphoenolpyruvate:sugar phosphotransferase system enzyme I K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D SMULJ23_1318 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D SMULJ23_1793 ptsG; putative PTS system, glucose-specific IIABC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D SMULJ23_0317 scrA; putative PTS system sucrose-specific IIABC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D SMULJ23_1051 bglP; putative PTS system, beta-glucoside-specific EII component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D SMULJ23_1786 pttB; putative PTS system, trehalose-specific IIABC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D SMULJ23_0095 putative PTS system fructose-specific IIA component K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D SMULJ23_0094 putative PTS system fructose-specific IIBC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMULJ23_1141 fruAB; putative PTS system, fructose-specific enzyme IIABC component K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D SMULJ23_0861 mtlA2; PTS system, mannitol-specific enzyme IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D SMULJ23_0859 mtlA1; PTS system, mannitol-specific enzyme IIBC component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D SMULJ23_0627 lacF; PTS system lactose-specific enzyme IIA K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D SMULJ23_0628 lacE; PTS system lactose-specific enzyme IIBC K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D SMULJ23_0529 ptcA; putative PTS system cellobiose-specific IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D SMULJ23_0527 celB; cellobiose phosphotransferase system IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D SMULJ23_0531 ptcC; cellobiose phosphotransferase system IIC component K02761 celB; cellobiose PTS system EIIC component
D SMULJ23_1655 srlB; putative PTS system, sorbitol-specific enzyme IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D SMULJ23_1656 srlE; PTS system sorbitol phosphotransferase enzyme IIBC K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D SMULJ23_1657 srlA; PTS system glucitol/sorbitol-specific transporter subunit IIC2 K02783 srlA; glucitol/sorbitol PTS system EIIC component
D SMULJ23_0624 putative PTS family fructose/mannitol porter component IIA K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D SMULJ23_0625 putative PTS family fructose/mannitol porter component IIB K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D SMULJ23_0626 putative PTS family fructose/mannitol porter component IIC K20114 gatC; galactose PTS system EIIC component
D SMULJ23_0285 ptnA; putative PTS system mannose-specific component IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D SMULJ23_0082 putative sorbose PTS system IIC component K02795 manY; mannose PTS system EIIC component
D SMULJ23_0221 levC; putative PTS system mannose-specific IIC component K02795 manY; mannose PTS system EIIC component
D SMULJ23_0284 ptnC; putative PTS system mannose-specific component IIC K02795 manY; mannose PTS system EIIC component
D SMULJ23_0083 putative PTS system IID component K02796 manZ; mannose PTS system EIID component
D SMULJ23_0283 putative PTS system mannose-specific component IID K02796 manZ; mannose PTS system EIID component
D SMULJ23_0084 putative PTS system IIA component K19506 gfrA; fructoselysine/glucoselysine PTS system EIIA component [EC:2.7.1.-]
D SMULJ23_0219 levA; putative PTS system sugar-specific enzyme IIA component K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D SMULJ23_1699 ptxA; putative PTS system, enzyme IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D SMULJ23_1480 putative PTS family porter component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SMULJ23_1700 ptxB; putative PTS system, enzyme IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D SMULJ23_1479 putative PTS family porter component IIC K03475 ulaA; ascorbate PTS system EIIC component
D SMULJ23_1701 sgaT; PTS system ascorbate-specific transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component
D SMULJ23_1581 glpF; putative glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D SMULJ23_0311 hypothetical protein K10716 kch; voltage-gated potassium channel
D SMULJ23_0475 nrgA; putative ammonium transporter NrgA K03320 amt; ammonium transporter, Amt family
D SMULJ23_1195 mscL; putative large conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D SMULJ23_0073 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D SMULJ23_0307 corA2; putative magnesium/cobalt transport protein K03284 corA; magnesium transporter
D SMULJ23_1166 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D SMULJ23_0441 hlyX; putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SMULJ23_1409 LrgA family protein K05338 lrgA; holin-like protein
D SMULJ23_0435 putative murein hydrolase regulator LrgA K06518 cidA; holin-like protein
D SMULJ23_1075 rocE; putative amino acid permease K16235 mmuP; S-methylmethionine transporter
D SMULJ23_1837 arcD; putative arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D SMULJ23_1706 yrfD; putative amino acid antiporter K20265 gadC; glutamate:GABA antiporter
D SMULJ23_1813 zupT; zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D SMULJ23_0564 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D SMULJ23_0427 trkH; putative potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D SMULJ23_0428 trkA; putative potassium uptake system protein K03499 trkA; trk/ktr system potassium uptake protein
D SMULJ23_0562 trk; putative potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D SMULJ23_0563 trkB; putative potassium uptake system protein TrkB K03499 trkA; trk/ktr system potassium uptake protein
D SMULJ23_1155 pyrP; putative uracil permease K02824 uraA; uracil permease
D SMULJ23_1571 putative permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D SMULJ23_0765 putative permease chloride channel K03281 clcA; chloride channel protein, CIC family
D SMULJ23_0766 putative permease chloride channel K03281 clcA; chloride channel protein, CIC family
D SMULJ23_1239 mntH; putative manganese transporter K03322 mntH; manganese transport protein
D SMULJ23_1112 putative permease K24180 mleP; malate permease and related proteins
D SMULJ23_0116 putative malate permease K24180 mleP; malate permease and related proteins
D SMULJ23_1597 putative integral membrane protein K26605 azlC; branched chain amino acid efflux pump
D SMULJ23_1596 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D SMULJ23_0433 hypothetical protein K23675 fmnP; riboflavin transporter
D SMULJ23_1295 hypothetical protein K16789 thiT; thiamine transporter
D SMULJ23_1639 hypothetical protein K16788 niaX; niacin transporter
D SMULJ23_1355 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D SMULJ23_1290 ftsW; putative cell division protein FtsW K03588 ftsW; cell division protein FtsW
D SMULJ23_1015 oadB; putative oxaloacetate decarboxylase, sodium ion pump subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D SMULJ23_1009 pycB; oxaloacetate decarboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D SMULJ23_1016 bcc; putative acetyl-CoA carboxylase biotin carboxylcarrier subunit K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D SMULJ23_0873 ccdA; putative cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D SMULJ23_1682 comB; putative ComB K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D SMULJ23_1151 putative permease K24950 yknX; membrane fusion protein, antimicrobial resistance system
D SMULJ23_1080 putative permease K03811 pnuC; nicotinamide mononucleotide transporter
D SMULJ23_1423 feoA; putative ferrous ion transport protein A K04758 feoA; ferrous iron transport protein A
D SMULJ23_1422 feoB; putative ferrous ion transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:smj02044]
D SMULJ23_1434 ylmG; hypothetical protein K02221 yggT; YggT family protein
D SMULJ23_1365 comEA; putative competence protein K02237 comEA; competence protein ComEA
D SMULJ23_0310 comEB; putative deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D SMULJ23_1364 comEC; putative competence protein K02238 comEC; competence protein ComEC
D SMULJ23_1493 comFA; putative late competence protein K02240 comFA; competence protein ComFA
D SMULJ23_1492 comFC; putative late competence protein K02242 comFC; competence protein ComFC
D SMULJ23_0193 comYA; putative ABC transporter ATP-binding protein ComYA K02243 comGA; competence protein ComGA
D SMULJ23_0194 comYB; ABC transporter ComYB K02244 comGB; competence protein ComGB
D SMULJ23_0195 comYC; putative competence protein ComYC K02245 comGC; competence protein ComGC
D SMULJ23_0196 comYD; putative competence protein ComYD K02246 comGD; competence protein ComGD
D SMULJ23_0198 hypothetical protein K02248 comGF; competence protein ComGF
D SMULJ23_1449 signal peptidase type IV K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D SMULJ23_0320 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D SMULJ23_0230 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D SMULJ23_0521 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D SMULJ23_1753 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D SMULJ23_0975 ffh; signal recognition particle protein subunit Ffh K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D SMULJ23_1259 ftsY; putative cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D SMULJ23_0356 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D SMULJ23_1634 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D SMULJ23_0411 OxaA-like protein precursor K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:smj02042]
D SMULJ23_1890 hypothetical protein K11041 eta; exfoliative toxin A/B
D SMULJ23_0441 hlyX; putative hemolysin K03699 tlyC; magnesium and cobalt exporter, CNNM family
D SMULJ23_1085 hylIII; putative hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:smj02022]
D SMULJ23_0603 covS; putative histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D SMULJ23_0602 covR; putative response regulator CovR K07668 vicR; two-component system, OmpR family, response regulator VicR
D SMULJ23_1022 bceS; two-component sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D SMULJ23_1023 bceR; two component transcriptional regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D SMULJ23_0911 ciaH; putative histidine kinase sensor K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D SMULJ23_0910 ciaR; putative response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D SMULJ23_0252 gcrR; response regulator GcrR for glucan-binding protein C K18941 arlR; two-component system, OmpR family, response regulator ArlR
D SMULJ23_1333 spaK; putative histidine kinase SpaK K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D SMULJ23_1334 spaR; putative response regulator SpaR K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D SMULJ23_0574 desK; putative histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D SMULJ23_0575 desR; DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D SMULJ23_1504 putative histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D SMULJ23_1503 putative response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D SMULJ23_0154 npkK; putative two-component system sensor histidine kinase K14988 salK; two-component system, NarL family, secretion system sensor histidine kinase SalK
D SMULJ23_1407 lytS; putative histidine kinase LytS K07704 lytS; two-component system, LytTR family, sensor histidine kinase LytS [EC:2.7.13.3]
D SMULJ23_1408 lytR; putative response regulator LytR K07705 lytT; two-component system, LytTR family, response regulator LytT
D SMULJ23_0260 comD; putative histidine kinase of the competence regulon ComD K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D SMULJ23_0259 comE; putative response regulator of the competence regulon ComE K07707 agrA; two-component system, LytTR family, response regulator AgrA
C 02035 Bacterial motility proteins [BR:smj02035]
D SMULJ23_0836 putative ABC transporter, amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_1528 putative ABC transporter, amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D SMULJ23_0235 putative amino acid binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:smj04812]
D SMULJ23_1437 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SMULJ23_1438 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D SMULJ23_1921 spoJ; putative SpoJ K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:smj04147]
D SMULJ23_0806 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D SMULJ23_1616 gapC; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMULJ23_1414 gapC; putative glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D SMULJ23_1615 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D SMULJ23_0855 pykF; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D SMULJ23_0501 cypB; putative peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D SMULJ23_0225 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D SMULJ23_0067 dnaK; heat shock protein DnaK K04043 dnaK; molecular chaperone DnaK
D SMULJ23_1661 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D SMULJ23_1914 guaB; inosine 5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D SMULJ23_1289 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D SMULJ23_1567 putative Hit-like protein involved in cell-cycle regulation K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D SMULJ23_0924 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D SMULJ23_1752 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D SMULJ23_0648 aptA; putative adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D SMULJ23_1636 araH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D SMULJ23_1637 araG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D SMULJ23_1127 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D SMULJ23_0581 glgB; putative 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D SMULJ23_1612 glnA; glutamine synthetase type 1 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D SMULJ23_0480 serA; putative D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D SMULJ23_0032 purH; putative phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D SMULJ23_0685 pdhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_0108 adhD; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D SMULJ23_1283 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D SMULJ23_1389 pmgY; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:smj02048]
D SMULJ23_0384 cas1; CRISPR-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D SMULJ23_0702 cas1; CRISPR-associated protein cas1 K15342 cas1; CRISP-associated protein Cas1
D SMULJ23_0703 cas2; CRISPR-associated protein cas2 K09951 cas2; CRISPR-associated protein Cas2
D SMULJ23_0385 cas2; CRISPR-associated protein cas2 K09951 cas2; CRISPR-associated protein Cas2
D SMULJ23_0379 cas3; putative CRISPR-associated protein cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D SMULJ23_0383 cas4; CRISPR-associated protein cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D SMULJ23_0381 csd1; CRISPR-associated protein csd1 K19117 csd1; CRISPR-associated protein Csd1
D SMULJ23_0382 csd2; CRISPR-associated protein csd2 K19118 csd2; CRISPR-associated protein Csd2
D SMULJ23_0380 cas5; CRISPR-associated protein cas5 K19119 cas5d; CRISPR-associated protein Cas5d
D SMULJ23_0701 csn1; CRISPR-associated protein csn1 K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D SMULJ23_0704 csn2; CRISPR-associated protein csn2 K19137 csn2; CRISPR-associated protein Csn2
D SMULJ23_1485 putative type II restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D SMULJ23_1487 dam; putative site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D SMULJ23_1486 dpnIIB; putative adenine-specific DNA methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SMULJ23_0200 hypothetical protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D SMULJ23_1584 hypothetical protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D SMULJ23_1585 hypothetical protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D SMULJ23_0634 putative endonuclease K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D SMULJ23_0152 pemK; putative ppGpp-regulated growth inhibitor K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SMULJ23_0792 transcriptional regulator K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D SMULJ23_0151 pemI; putative cell growth regulatory protein K07172 mazE; antitoxin MazE
D SMULJ23_0035 hypothetical protein K06218 relE; mRNA interferase RelE/StbE
D SMULJ23_0366 hypothetical protein K07473 dinJ; DNA-damage-inducible protein J
D SMULJ23_0799 Plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
D SMULJ23_1437 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D SMULJ23_0844 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D SMULJ23_0842 parE; putative DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D SMULJ23_1170 nifS2; putative aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D SMULJ23_0983 icsS1; iron-sulfur cofactor synthesis protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:smj01504]
D SMULJ23_0061 putative D-alanyl-D-alanine carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D SMULJ23_0444 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D SMULJ23_0445 dltB; putative D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D SMULJ23_0446 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D SMULJ23_0447 dltD; putative extramembranal protein DltD K03740 dltD; D-alanine transfer protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:smj03100]
D SMULJ23_t0001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0021 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0031 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D SMULJ23_t0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0065 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0009 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0039 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0041 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D SMULJ23_t0022 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMULJ23_t0063 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D SMULJ23_t0003 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMULJ23_t0033 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMULJ23_t0025 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D SMULJ23_t0061 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D SMULJ23_t0043 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMULJ23_t0049 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D SMULJ23_t0056 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMULJ23_t0064 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D SMULJ23_t0007 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0016 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0058 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0029 SMULJ23_tRNA29; tRNA-Pseudo K14225 tRNA-Gly; tRNA Gly
D SMULJ23_t0050 tRNA-His K14226 tRNA-His; tRNA His
D SMULJ23_t0017 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMULJ23_t0057 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D SMULJ23_t0048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0019 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0005 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0027 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0008 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0038 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D SMULJ23_t0004 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMULJ23_t0034 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMULJ23_t0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMULJ23_t0062 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D SMULJ23_t0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMULJ23_t0014 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMULJ23_t0054 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMULJ23_t0011 tRNA-Met K14230 tRNA-Met; tRNA Met
D SMULJ23_t0015 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMULJ23_t0053 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D SMULJ23_t0010 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMULJ23_t0040 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D SMULJ23_t0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0055 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0018 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0047 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D SMULJ23_t0006 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0028 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0036 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0020 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0030 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D SMULJ23_t0051 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D SMULJ23_t0052 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMULJ23_t0042 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D SMULJ23_t0002 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMULJ23_t0059 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMULJ23_t0024 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMULJ23_t0032 tRNA-Val K14237 tRNA-Val; tRNA Val
D SMULJ23_r0001 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0010 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0004 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0007 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D SMULJ23_r0002 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0011 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0008 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D SMULJ23_r0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0009 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0013 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_r0012 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D SMULJ23_n0003 Bacteria_small_SRP; Signal recognition particle RNA K01983 ffs; SRP RNA
D SMULJ23_n0002 RNaseP_bact_b K01978 rnpB; M1 RNA
D SMULJ23_tm0001 SsrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D SMULJ23_1314 yvgN3; oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D SMULJ23_0686 pdhA; putative pyruvate dehydrogenase TPP-dependent E1 component alpha-subunit K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D SMULJ23_0687 pdhB; putative pyruvate dehydrogenase E1 component subunit beta K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D SMULJ23_1460 dapB1; putative dihydrodipicolinate reductase K25950 amdH; secondary-alkyl amine dehydrogenase [NAD(P)+] [EC:1.4.1.28]
D SMULJ23_1272 putative oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D SMULJ23_1242 ahpF; NADH oxidase/alkyl hydroperoxidase reductase peroxide-forming K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D SMULJ23_0509 msrA2; putative peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D SMULJ23_0759 yghU; putative glutathione S-transferase YghU K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D SMULJ23_1100 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D SMULJ23_1243 ahpC; alkyl hydroperoxide reductase K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D SMULJ23_1144 trxB2; putative thioredoxin reductase K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D SMULJ23_1815 nrdG; putative anaerobic ribonucleotide reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D SMULJ23_1500 pflC; putative pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SMULJ23_0442 pflA; pyruvate-formate lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D SMULJ23_0488 tehB; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D SMULJ23_1516 N6-adenine-specific DNA methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D SMULJ23_1707 otcA; putrescine carbamoyltransferase K13252 ptcA; putrescine carbamoyltransferase [EC:2.1.3.6]
D SMULJ23_0608 putative acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D SMULJ23_1249 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D SMULJ23_0947 apbE; putative thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D SMULJ23_0093 fruK-1; putative fructose-1-phosphate kinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D SMULJ23_1737 hypothetical protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D SMULJ23_0681 hypothetical protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D SMULJ23_1250 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D SMULJ23_0670 estA; putative tributyrin esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D SMULJ23_1216 esterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D SMULJ23_0343 hypothetical protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D SMULJ23_1899 hypothetical protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D SMULJ23_1630 tatD; putative deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D SMULJ23_1629 rnmV; putative ribonuclease K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D SMULJ23_1129 dexB; dextran glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D SMULJ23_1296 cwlA; putative autolysin K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D SMULJ23_0120 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D SMULJ23_0747 aldR; putative translation initiation inhibitor K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D SMULJ23_0542 mycA1; myosin-cross-reactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D SMULJ23_1471 mycA; myosin-cross-reactive antigen K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D SMULJ23_1419 hypothetical protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D SMULJ23_1411 hypothetical protein K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D SMULJ23_1276 pacL; putative calcium-transporting ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SMULJ23_0561 pacL; putative cation-transporting P-type ATPase PacL K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D SMULJ23_1801 copA; ppGpp synthetase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D SMULJ23_0469 acuB; putative acetoin utilization protein, acetoin dehydrogenase K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D SMULJ23_1306 fer; putative ferredoxin [4Fe-4S] K05337 fer; ferredoxin
D SMULJ23_1718 nifU; putative nitrogen fixation-like protein, NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
C 99983 Lipid metabolism
D SMULJ23_1119 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D SMULJ23_1400 hypothetical protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D SMULJ23_0365 nrdI; putative ribonucleotide reductase protein K03647 nrdI; protein involved in ribonucleotide reduction
D SMULJ23_0597 endA; putative membrane nuclease EndA K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D SMULJ23_0927 yaeR; glyoxylase family protein K08234 yaeR; glyoxylase I family protein
D SMULJ23_1436 ylmE; hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D SMULJ23_0898 spxA; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D SMULJ23_1827 spxA; transcriptional regulator Spx K16509 spxA; regulatory protein spx
D SMULJ23_1253 transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D SMULJ23_1501 putative polyribonucleotide nucleotidyltransferase K07570 GSP13; general stress protein 13
C 99975 Protein processing
D SMULJ23_0075 tig; trigger factor K03545 tig; trigger factor
D SMULJ23_0523 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D SMULJ23_1323 nrdH; putative glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D SMULJ23_1723 mecA; adaptor protein K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D SMULJ23_0979 radC; putative DNA repair protein K03630 radC; DNA repair protein RadC
D SMULJ23_1622 hypothetical protein K09760 rmuC; DNA recombination protein RmuC
D SMULJ23_1030 smf; putative DNA processing Smf protein K04096 smf; DNA processing protein
D SMULJ23_0650 replication protein DnaD-like K02086 dnaD; DNA replication protein
D SMULJ23_1800 cshA; putative ATPase K07478 ycaJ; putative ATPase
D SMULJ23_0267 hypothetical protein K07483 K07483; transposase
D SMULJ23_1137 putative transposase K07483 K07483; transposase
D SMULJ23_0169 partial transposase K07483 K07483; transposase
D SMULJ23_0301 transposase K07486 K07486; transposase
D SMULJ23_1332 transposase K07486 K07486; transposase
D SMULJ23_1396 transposase K07486 K07486; transposase
D SMULJ23_0203 partial transposase K07491 rayT; REP-associated tyrosine transposase
D SMULJ23_0168 tra; putative transposase K07497 K07497; putative transposase
D SMULJ23_1867 integrase K07497 K07497; putative transposase
D SMULJ23_1138 tra; putative transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D SMULJ23_1592 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D SMULJ23_0663 aapA; putative amino acid permease K03293 TC.AAT; amino acid transporter, AAT family
D SMULJ23_0014 putative amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D SMULJ23_1018 citN; putative Mg2+/citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family
D SMULJ23_0868 putative sodium/amino acid (alanine) symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D SMULJ23_1384 putative sodium-dependent transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
C 99978 Cell growth
D SMULJ23_1515 hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D SMULJ23_1633 putative RNA-binding protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D SMULJ23_1443 typA; putative GTP-binding protein K06207 typA; GTP-binding protein
D SMULJ23_0058 hypothetical protein K07166 K07166; ACT domain-containing protein
D SMULJ23_0511 phoH; putative phosphate starvation-induced protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D SMULJ23_1294 acm; putative endolysin K07273 acm; lysozyme
C 99994 Others
D SMULJ23_0907 phoU; putative phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein
D SMULJ23_0487 hemolysis inducing protein K26996 sdpI; immunity protein, SdpI family
B
B 09194 Poorly characterized
C 99996 General function prediction only
D SMULJ23_1346 coiA; putative competence protein/transcription factor K06198 coiA; competence protein CoiA
D SMULJ23_0211 putative phenylalanyl-tRNA synthetase beta subunit K06878 K06878; tRNA-binding protein
D SMULJ23_0809 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily
D SMULJ23_1235 putative hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D SMULJ23_0762 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D SMULJ23_1717 sufB; ABC transporter membrane protein K09014 sufB; Fe-S cluster assembly protein SufB
D SMULJ23_1720 putative ABC transporter, membrane protein K09015 sufD; Fe-S cluster assembly protein SufD
D SMULJ23_0568 hypothetical protein K07058 K07058; membrane protein
D SMULJ23_0246 lemA; putative cytoplasmic membrane protein K03744 lemA; LemA protein
D SMULJ23_1252 hypothetical protein K03095 sprL; SprT-like protein
D SMULJ23_0258 dedA; putative membrane-associated protein DedA K03975 dedA; membrane-associated protein
D SMULJ23_1892 hypothetical protein K01421 yhgE; putative membrane protein
D SMULJ23_1297 hypothetical protein K08974 K08974; putative membrane protein
D SMULJ23_1257 ABC superfamily ATP binding cassette transporter, binding protein K08986 ycgQ; putative membrane protein
D SMULJ23_1095 hypothetical protein K08987 K08987; putative membrane protein
D SMULJ23_0863 phnA; putative alkylphosphonate uptake protein K06193 phnA; protein PhnA
C 99997 Function unknown
D SMULJ23_1279 hypothetical protein K06885 K06885; uncharacterized protein
D SMULJ23_1357 putative thioesterase K06889 K06889; uncharacterized protein
D SMULJ23_0415 putative integral membrane protein K06890 K06890; uncharacterized protein
D SMULJ23_1669 hypothetical protein K06929 K06929; uncharacterized protein
D SMULJ23_1311 putative Fe-S-cluster oxidoreductase K06940 K06940; uncharacterized protein
D SMULJ23_0414 hypothetical protein K06950 K06950; uncharacterized protein
D SMULJ23_1147 putative RNA binding protein K06960 K06960; uncharacterized protein
D SMULJ23_0817 hypothetical protein K07045 K07045; uncharacterized protein
D SMULJ23_1709 hypothetical protein K07078 K07078; uncharacterized protein
D SMULJ23_1256 putative permease K07089 K07089; uncharacterized protein
D SMULJ23_0420 phosphodiesterase family protein K07095 K07095; uncharacterized protein
D SMULJ23_1640 putative transcriptional regulator K07105 K07105; uncharacterized protein
D SMULJ23_0770 hypothetical protein K07118 K07118; uncharacterized protein
D SMULJ23_1877 putative short-chain dehydrogenase K07124 K07124; uncharacterized protein
D SMULJ23_0644 putative oxidoreductase K07124 K07124; uncharacterized protein
D SMULJ23_1413 putative oxidoreductase K07124 K07124; uncharacterized protein
D SMULJ23_0437 putative radical SAM protein K07139 K07139; uncharacterized protein
D SMULJ23_0426 putative alpha-hemolysin K08998 K08998; uncharacterized protein
D SMULJ23_0889 putative sensory box protein K09155 K09155; uncharacterized protein
D SMULJ23_0059 putative glycerol-3-phosphate dehydrogenaseglycerol-3-phosphate dehydrogenase K09157 K09157; uncharacterized protein
D SMULJ23_0974 ylmX; putative DNA-binding protein K09787 K09787; uncharacterized protein
D SMULJ23_0508 hypothetical protein K00243 K00243; uncharacterized protein
D SMULJ23_1814 hypothetical protein K09861 K09861; uncharacterized protein
D SMULJ23_1666 hypothetical protein K09962 K09962; uncharacterized protein
D SMULJ23_0417 hypothetical protein K09976 K09976; uncharacterized protein
D SMULJ23_1164 hypothetical protein K07584 ysxB; uncharacterized protein
D SMULJ23_0362 hypothetical protein K07586 ygaC; uncharacterized protein
D SMULJ23_1560 hypothetical protein K07742 ylxR; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024