+D GENES KO
#
KEGG Orthology (KO) - Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:spng00010]
D HMPREF1038_00695 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF1038_02080 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF1038_00914 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF1038_00627 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF1038_01559 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF1038_02008 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF1038_00532 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF1038_01640 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF1038_01050 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF1038_00915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF1038_01032 TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HMPREF1038_01033 TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HMPREF1038_01034 putative acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF1038_01224 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF1038_02021 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF1038_00340 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF1038_00130 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF1038_01481 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF1038_01059 glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D HMPREF1038_00321 bglA; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF1038_00354 celA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF1038_00602 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF1038_02017 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF1038_01666 PTS system, maltose and glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:spng00020]
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF1038_01032 TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HMPREF1038_01033 TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HMPREF1038_01034 putative acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:spng00030]
D HMPREF1038_02080 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF1038_01246 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF1038_01488 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D HMPREF1038_00426 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF1038_01964 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF1038_02143 tktC; transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_02144 tktN; putative transketolase N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_02025 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_01602 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_00838 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HMPREF1038_00853 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D HMPREF1038_00839 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HMPREF1038_01481 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF1038_01085 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF1038_00092 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF1038_00366 kdgA; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutaratesaldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D HMPREF1038_01059 glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D HMPREF1038_00367 kdgK; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D HMPREF1038_00627 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF1038_00914 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:spng00040]
D HMPREF1038_00215 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF1038_00406 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF1038_02102 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF1038_02030 3-dehydro-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D HMPREF1038_02029 putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D HMPREF1038_02028 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D HMPREF1038_01964 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF1038_02177 xylB; sugar kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D HMPREF1038_01273 zinc-dependent alcohol dehydrogenase K05352 tarJ; ribitol-5-phosphate 2-dehydrogenase (NADP+) [EC:1.1.1.405]
D HMPREF1038_01274 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K21030 tarI; D-ribitol-5-phosphate cytidylyltransferase [EC:2.7.7.40]
D HMPREF1038_02168 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D HMPREF1038_02176 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:spng00051]
D HMPREF1038_01701 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF1038_00750 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF1038_02168 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D HMPREF1038_02176 L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D HMPREF1038_02177 xylB; sugar kinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D HMPREF1038_00914 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF1038_00889 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D HMPREF1038_00627 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF1038_01559 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF1038_01603 allulose-6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
D HMPREF1038_01606 PTS family fructose/mannitol (fru) porter component IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D HMPREF1038_01605 PTS family fructose/mannitol (fru) porter component IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D HMPREF1038_01604 PTS family fructose/mannitol (fru) porter component IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF1038_00890 fruI; PTS family fructose/mannitol (fru) porter component IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF1038_00128 PTS family mannose/fructose/sorbose family (man) porter component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF1038_02174 PTS family mannose/fructose/sorbose porter component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF1038_00339 manL; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HMPREF1038_00126 PTS family mannose/fructose/sorbose family (man) porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_00338 manM; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_02172 PTS family mannose/fructose/sorbose porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_02171 PTS family mannose/fructose/sorbose porter component IID K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00127 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00337 manN; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IID K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:spng00052]
D HMPREF1038_00130 galM; aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D HMPREF1038_01822 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF1038_01821 UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF1038_01592 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF1038_01119 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF1038_01835 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF1038_02102 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF1038_01481 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF1038_00695 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF1038_00674 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF1038_00124 bgaC; beta-galactosidase 3 K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D HMPREF1038_01870 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF1038_01198 tagatose-6-phosphate kinase K00917 lacC; tagatose 6-phosphate kinase [EC:2.7.1.144]
D HMPREF1038_00914 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF1038_01197 tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D HMPREF1038_01199 galactose-6-phosphate isomerase, LacB subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D HMPREF1038_01200 galactose-6-phosphate isomerase, LacA subunit K01819 E5.3.1.26; galactose-6-phosphate isomerase [EC:5.3.1.26]
D HMPREF1038_01193 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D HMPREF1038_00513 6-phospho-beta-galactosidase K01220 E3.2.1.85; 6-phospho-beta-galactosidase [EC:3.2.1.85]
D HMPREF1038_01195 PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HMPREF1038_00512 PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HMPREF1038_00514 PTS system, lactose-specific IIBC components K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HMPREF1038_01194 PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HMPREF1038_01757 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF1038_01704 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF1038_00370 PTS family sugar porter component IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D HMPREF1038_00372 PTS family sugar porter component IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D HMPREF1038_00373 PTS family sugar porter component IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D HMPREF1038_00374 PTS family sugar porter component IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D HMPREF1038_00129 agaS; putative tagatose-6-phosphate ketose/aldose isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-]
C 00053 Ascorbate and aldarate metabolism [PATH:spng00053]
D HMPREF1038_00215 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF1038_00406 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF1038_00405 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HMPREF1038_02031 PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HMPREF1038_02032 ascorbate-specific PTS system EIIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HMPREF1038_02146 PTS family sugar porter component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HMPREF1038_02033 putative transport protein SgaT protein K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF1038_02145 ulaA; putative PTS family L-ascorbate (L-asc) porter component IIC K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF1038_02026 putative L-ascorbate-6-phosphate lactonase UlaG (L-ascorbate utilization protein G) K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-]
D HMPREF1038_02030 3-dehydro-L-gulonate-6-phosphate decarboxylase K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85]
D HMPREF1038_02029 putative hexulose-6-phosphate isomerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D HMPREF1038_02028 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:spng00500]
D HMPREF1038_01702 PTS family sucrose (suc) porter component IIABC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HMPREF1038_01757 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF1038_01704 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D HMPREF1038_01866 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D HMPREF1038_02102 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF1038_00306 PTS family porter component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00358 PTS family porter component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_02020 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_01774 ptcA; PTS family cellobiose (cel) porter component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00307 PTS family porter component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00356 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_02019 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_01775 ptcB; PTS family cellobiose (cel) porter component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00308 PTS family porter component IIC K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_00360 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_00510 PTS system, cellobiose-specific, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_02018 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_01773 celB; PTS family cellobiose (cel) porter component IIC K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_01778 PTS system, cellobiose-specific, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_00321 bglA; beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF1038_00354 celA; 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF1038_00602 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF1038_02017 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D HMPREF1038_01056 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF1038_01057 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF1038_01055 starch [bacterial glycogen] synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D HMPREF1038_01058 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF1038_02118 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D HMPREF1038_01061 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D HMPREF1038_01370 amy; cytoplasmic alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1]
D HMPREF1038_02119 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D HMPREF1038_00770 PTS family glucose (glc) porter component IIABC K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D HMPREF1038_00771 hypothetical protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D HMPREF1038_01851 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D HMPREF1038_01850 alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D HMPREF1038_01481 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF1038_00695 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF1038_02080 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF1038_01701 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:spng00520]
D HMPREF1038_00122 strH; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF1038_02152 putative glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF1038_02053 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D HMPREF1038_01402 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D HMPREF1038_01701 scrK; fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D HMPREF1038_00322 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF1038_01545 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D HMPREF1038_01008 gcaD; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF1038_01099 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF1038_01947 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF1038_01378 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF1038_01326 N-acetylmannosamine-6-P epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D HMPREF1038_01667 N-acetylmannosamine-6-P epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D HMPREF1038_01317 putative N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D HMPREF1038_01658 N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3]
D HMPREF1038_01666 PTS system, maltose and glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HMPREF1038_00695 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF1038_01481 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF1038_02102 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF1038_00215 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF1038_00406 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF1038_01822 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF1038_01821 UTP--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D HMPREF1038_01592 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF1038_01119 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF1038_01835 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF1038_00405 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HMPREF1038_00128 PTS family mannose/fructose/sorbose family (man) porter component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF1038_02174 PTS family mannose/fructose/sorbose porter component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF1038_00339 manL; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HMPREF1038_00126 PTS family mannose/fructose/sorbose family (man) porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_00338 manM; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_02172 PTS family mannose/fructose/sorbose porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_02171 PTS family mannose/fructose/sorbose porter component IID K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00127 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00337 manN; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IID K02796 manZ; mannose PTS system EIID component
D HMPREF1038_02080 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF1038_00750 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF1038_01056 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D HMPREF1038_01057 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:spng00620]
D HMPREF1038_01032 TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HMPREF1038_01033 TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HMPREF1038_01034 putative acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF1038_00504 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF1038_02021 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF1038_00340 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF1038_02039 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF1038_01080 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF1038_00915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF1038_00471 accA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HMPREF1038_00467 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HMPREF1038_00469 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HMPREF1038_00470 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HMPREF1038_01956 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D HMPREF1038_00746 spxB; pyruvate oxidase K00158 spxB; pyruvate oxidase [EC:1.2.3.3]
D HMPREF1038_01224 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF1038_00982 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D HMPREF1038_01630 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D HMPREF1038_01112 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:spng00630]
D HMPREF1038_00165 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D HMPREF1038_00535 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF1038_01162 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF1038_01052 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF1038_00366 kdgA; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutaratesaldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:spng00640]
D HMPREF1038_02039 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF1038_01080 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF1038_00504 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF1038_00471 accA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HMPREF1038_00467 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HMPREF1038_00469 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HMPREF1038_00470 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HMPREF1038_01224 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF1038_00311 gldH; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
C 00650 Butanoate metabolism [PATH:spng00650]
D HMPREF1038_02021 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF1038_00504 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D HMPREF1038_01707 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D HMPREF1038_02052 alcohol dehydrogenase, zinc-containing K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D HMPREF1038_00486 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF1038_00487 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF1038_01380 aldB; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:spng00660]
D HMPREF1038_00486 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF1038_00487 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF1038_01380 aldB; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D HMPREF1038_01258 putative 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF1038_01260 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:spng00562]
D HMPREF1038_01390 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF1038_01559 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:spng00190]
D HMPREF1038_01492 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF1038_01490 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF1038_01491 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF1038_01493 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF1038_01489 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF1038_01495 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF1038_01494 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF1038_01496 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF1038_01519 inorganic diphosphatase PpaC K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:spng00710]
D HMPREF1038_00532 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF1038_02008 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF1038_00627 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF1038_02143 tktC; transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_02144 tktN; putative transketolase N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_02025 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_01602 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_00838 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D HMPREF1038_01559 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF1038_01964 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D HMPREF1038_01112 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
C 00720 Other carbon fixation pathways [PATH:spng00720]
D HMPREF1038_01112 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF1038_00471 accA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HMPREF1038_00467 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HMPREF1038_00469 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HMPREF1038_00470 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HMPREF1038_01233 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF1038_00836 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF1038_00611 methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HMPREF1038_01080 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF1038_02039 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:spng00680]
D HMPREF1038_01162 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF1038_01050 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF1038_01112 ppc; phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D HMPREF1038_00627 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D HMPREF1038_00914 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF1038_02039 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D HMPREF1038_01080 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF1038_01640 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 00910 Nitrogen metabolism [PATH:spng00910]
D HMPREF1038_01310 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF1038_00535 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF1038_02160 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HMPREF1038_00089 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:spng00920]
D HMPREF1038_01304 DHH subfamily 1 protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D HMPREF1038_00614 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HMPREF1038_02218 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HMPREF1038_01561 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HMPREF1038_01508 cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:spng00061]
D HMPREF1038_00471 accA; acetyl-CoA carboxylase alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D HMPREF1038_00467 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D HMPREF1038_00469 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D HMPREF1038_00470 accD; acetyl-CoA carboxylase beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D HMPREF1038_00462 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HMPREF1038_00103 acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
D HMPREF1038_00464 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HMPREF1038_00461 fabH; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HMPREF1038_00466 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HMPREF1038_00465 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF1038_00803 oxidoreductase, short chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF1038_00468 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HMPREF1038_00463 fabK; enoyl-(acyl-carrier-protein) reductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HMPREF1038_00458 phaB; enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D HMPREF1038_02021 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF1038_00340 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:spng00561]
D HMPREF1038_01052 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF1038_00311 gldH; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D HMPREF1038_02193 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HMPREF1038_00102 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HMPREF1038_00863 conserved hypothetical membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HMPREF1038_01610 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF1038_01104 putative glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF1038_01870 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:spng00564]
D HMPREF1038_02100 glycerol-3-phosphate dehydrogenase [NAD(P)+ ] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D HMPREF1038_02192 glycerol-3-phosphate oxidase K00105 E1.1.3.21; alpha-glycerophosphate oxidase [EC:1.1.3.21]
D HMPREF1038_00863 conserved hypothetical membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HMPREF1038_01610 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D HMPREF1038_01014 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D HMPREF1038_00318 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D HMPREF1038_02230 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D HMPREF1038_00257 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:spng00600]
D HMPREF1038_00674 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF1038_01772 putative sulfatase K01130 E3.1.6.1; arylsulfatase [EC:3.1.6.1]
D HMPREF1038_01669 nanB; neuraminidase B K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF1038_01674 sialidase A (Neuraminidase A) K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF1038_01870 alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D HMPREF1038_00122 strH; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF1038_02152 putative glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:spng00230]
D HMPREF1038_01009 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D HMPREF1038_00839 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D HMPREF1038_01481 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF1038_01085 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF1038_00092 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D HMPREF1038_00111 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF1038_00116 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D HMPREF1038_00113 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HMPREF1038_00110 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D HMPREF1038_00112 purM; phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D HMPREF1038_00119 purK; phosphoribosylaminoimidazole carboxylase ATP-binding subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D HMPREF1038_00118 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D HMPREF1038_00109 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D HMPREF1038_00121 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF1038_00115 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF1038_01562 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF1038_00841 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF1038_00845 putative purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF1038_00012 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D HMPREF1038_02236 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF1038_01940 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HMPREF1038_01847 non-canonical purine NTP pyrophosphatase RdgB K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D HMPREF1038_01815 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D HMPREF1038_01432 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF1038_01253 guaC; guanosine 5'-monophosphate oxidoreductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D HMPREF1038_01718 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D HMPREF1038_01189 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF1038_01190 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF1038_00260 nrdD; ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF1038_01628 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF1038_01083 GTP pyrophosphokinase K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D HMPREF1038_00023 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF1038_00287 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF1038_02160 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:spng00240]
D HMPREF1038_01278 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF1038_01279 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF1038_01280 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF1038_01029 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D HMPREF1038_00984 dihydroorotate dehydrogenase B K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D HMPREF1038_00983 dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D HMPREF1038_00774 pyrDA; dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D HMPREF1038_00718 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D HMPREF1038_00717 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D HMPREF1038_00964 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D HMPREF1038_01940 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HMPREF1038_00529 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D HMPREF1038_01588 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D HMPREF1038_00264 putative uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D HMPREF1038_01215 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D HMPREF1038_01025 HAD superfamily (subfamily IA) hydrolase K25434 pynA; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D HMPREF1038_00758 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF1038_01281 pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF1038_00852 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D HMPREF1038_01318 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HMPREF1038_00854 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D HMPREF1038_00260 nrdD; ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D HMPREF1038_01189 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF1038_01190 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF1038_00757 comEB; late competence protein ComEB K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HMPREF1038_00954 dTMPkinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D HMPREF1038_00086 deoxyuridine 5`-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF1038_01167 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D HMPREF1038_00696 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HMPREF1038_01901 NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:spng00250]
D HMPREF1038_01983 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HMPREF1038_01953 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HMPREF1038_01530 aspartate transaminase K22457 E2.6.1.14; asparagine---oxo-acid transaminase [EC:2.6.1.14]
D HMPREF1038_01979 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF1038_00023 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D HMPREF1038_00121 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D HMPREF1038_01280 pyrB; aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D HMPREF1038_01310 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF1038_00535 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF1038_01278 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF1038_01279 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF1038_00322 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF1038_00111 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:spng00260]
D HMPREF1038_00457 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF1038_01171 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF1038_01349 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF1038_01348 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D HMPREF1038_02063 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF1038_01162 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF1038_01052 glycerate kinase I K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D HMPREF1038_01640 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF1038_01901 NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF1038_00166 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF1038_00167 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF1038_00491 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HMPREF1038_01785 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HMPREF1038_01786 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:spng00270]
D HMPREF1038_00614 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D HMPREF1038_02218 cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D HMPREF1038_01507 aminotransferase, class II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF1038_00610 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HMPREF1038_00773 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D HMPREF1038_00938 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HMPREF1038_01011 pfs; adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D HMPREF1038_01343 amidohydrolase family protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D HMPREF1038_00876 GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D HMPREF1038_01337 type II DNA modification methyltransferase Spn5252IP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF1038_00388 S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF1038_00457 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF1038_01171 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF1038_01349 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF1038_01561 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D HMPREF1038_01508 cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HMPREF1038_01219 O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D HMPREF1038_00867 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF1038_01224 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF1038_00166 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D HMPREF1038_00167 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
C 00280 Valine, leucine and isoleucine degradation [PATH:spng00280]
D HMPREF1038_00867 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF1038_01124 putative 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D HMPREF1038_01707 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:spng00290]
D HMPREF1038_00491 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D HMPREF1038_01258 putative 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D HMPREF1038_01260 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D HMPREF1038_00486 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF1038_00487 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF1038_00488 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF1038_02142 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HMPREF1038_00867 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF1038_01979 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00300 Lysine biosynthesis [PATH:spng00300]
D HMPREF1038_01349 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D HMPREF1038_00457 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF1038_01171 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF1038_01170 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF1038_01542 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D HMPREF1038_02108 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D HMPREF1038_00224 peptidase, M20/M25/M40 family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF1038_01959 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D HMPREF1038_00100 aspC; aspartate transaminase K00841 patA; aminotransferase [EC:2.6.1.-]
D HMPREF1038_02107 peptidase, M20/M25/M40 family K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D HMPREF1038_01652 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:spng00220]
D HMPREF1038_02159 arcB; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D HMPREF1038_02158 arcA; arginine deaminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D HMPREF1038_00535 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF1038_01278 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D HMPREF1038_01279 carA; carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D HMPREF1038_02160 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D HMPREF1038_01310 gdhA; glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D HMPREF1038_01979 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
C 00330 Arginine and proline metabolism [PATH:spng00330]
D HMPREF1038_00936 lysine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D HMPREF1038_00941 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D HMPREF1038_00942 N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D HMPREF1038_00938 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D HMPREF1038_00940 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D HMPREF1038_00953 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D HMPREF1038_00951 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF1038_00952 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism
C 00350 Tyrosine metabolism
D HMPREF1038_02021 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D HMPREF1038_00340 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00360 Phenylalanine metabolism
C 00380 Tryptophan metabolism
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:spng00400]
D HMPREF1038_01680 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF1038_01681 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF1038_01363 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D HMPREF1038_01365 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D HMPREF1038_01358 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D HMPREF1038_01359 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D HMPREF1038_01362 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D HMPREF1038_01791 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HMPREF1038_01790 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HMPREF1038_01789 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D HMPREF1038_01787 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D HMPREF1038_01788 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D HMPREF1038_01785 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D HMPREF1038_01786 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D HMPREF1038_01302 aroH; chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D HMPREF1038_01361 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D HMPREF1038_01357 pheA; prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism
C 00430 Taurine and hypotaurine metabolism [PATH:spng00430]
D HMPREF1038_01080 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D HMPREF1038_02039 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:spng00450]
D HMPREF1038_01508 cystathionine beta-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D HMPREF1038_01507 aminotransferase, class II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF1038_00610 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D HMPREF1038_00881 sufS; cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D HMPREF1038_01444 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D HMPREF1038_00798 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:spng00460]
D HMPREF1038_01983 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D HMPREF1038_01953 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D HMPREF1038_01162 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:spng00470]
D HMPREF1038_01678 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF1038_01653 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF1038_02186 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF1038_02184 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF1038_01848 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF1038_00713 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF1038_01959 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:spng00480]
D HMPREF1038_00807 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF1038_00794 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D HMPREF1038_00426 6-phosphogluconate dehydrogenase, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D HMPREF1038_01246 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF1038_00363 basA; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D HMPREF1038_00938 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:spng00511]
D HMPREF1038_01669 nanB; neuraminidase B K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF1038_01674 sialidase A (Neuraminidase A) K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D HMPREF1038_00674 beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D HMPREF1038_00122 strH; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF1038_02152 putative glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF1038_02154 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF1038_00985 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase K23989 lytD; mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]
D HMPREF1038_02157 alpha-L-fucosidase (Alpha-L-fucosidefucohydrolase) K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HMPREF1038_02170 conserved hypothetical membrane protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
D HMPREF1038_01639 hypothetical protein K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:spng00541]
D HMPREF1038_02102 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D HMPREF1038_01592 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF1038_01119 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF1038_01835 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D HMPREF1038_00215 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF1038_00406 ugd; UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D HMPREF1038_00405 UDP-glucuronate 5'-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D HMPREF1038_00410 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF1038_00412 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF1038_00411 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D HMPREF1038_00750 manA; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D HMPREF1038_01008 gcaD; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D HMPREF1038_00163 putative epimerase/dehydratase WbiI K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:spng00550]
D HMPREF1038_01099 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF1038_01947 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF1038_01378 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF1038_01504 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF1038_00713 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF1038_01653 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF1038_01652 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF1038_00988 dgkA; diacylglycerol kinase K00887 dgkA; undecaprenol kinase [EC:2.7.1.66]
D HMPREF1038_00317 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF1038_00500 bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF1038_00524 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF1038_00385 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF1038_00714 murG; UDP-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF1038_00419 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF1038_02006 pbp2a; penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HMPREF1038_00884 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HMPREF1038_00652 putative lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF1038_01514 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D HMPREF1038_01572 Mur ligase family protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF1038_01573 glutamine amidotransferase domain protein K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D HMPREF1038_00636 beta-lactam resistance factor K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D HMPREF1038_00637 beta-lactam resistance factor K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D HMPREF1038_02110 penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B
D HMPREF1038_01655 penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D HMPREF1038_00384 pbpX; Penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 00552 Teichoic acid biosynthesis [PATH:spng00552]
D HMPREF1038_00500 bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF1038_00524 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF1038_02186 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF1038_02184 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF1038_02185 dltB; D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D HMPREF1038_02183 dltD; D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
D HMPREF1038_01356 putative transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D HMPREF1038_01932 putative transcriptional regulator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D HMPREF1038_01104 putative glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF1038_01105 cpoA; glycosyltransferase CpoA K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D HMPREF1038_00163 putative epimerase/dehydratase WbiI K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D HMPREF1038_01804 putative capsular polysaccharide biosynthesis protein K25626 aatB; UDP-2-acetamido-4-dehydro-2,6-dideoxyglucose transaminase [EC:2.6.1.-]
D HMPREF1038_01805 putative glycosyl transferase K25627 wbgY; AATGal transferase
D HMPREF1038_00162 glycosyl transferase K25650 K25650; teichoic acid beta-1,3-glucosyltransferase [EC:2.4.1.-]
D HMPREF1038_01355 LicD family LPS biosynthesis protein K25651 licD3; teichoic acid ribitol-phosphate transferase
D HMPREF1038_01353 group 2 glycosyl transferase K25652 K25652; teichoic acid N-acetylgalactosaminyltransferase [EC:2.4.1.-]
D HMPREF1038_01354 group 1 glycosyl transferase K25653 K25653; teichoic acid N-acetylgalactosaminyltransferase [EC:2.4.1.-]
D HMPREF1038_01272 licA; choline kinase K25657 licA; choline kinase [EC:2.7.1.32]
D HMPREF1038_01270 licC; choline-phosphate cytidylyltransferase K25658 licC; choline-phosphate cytidylyltransferase [EC:2.7.7.15]
D HMPREF1038_01276 licD1; lipopolysaccharide core protein D1 K07271 licD; lipopolysaccharide cholinephosphotransferase [EC:2.7.8.-]
D HMPREF1038_01277 licD2 protein K25654 licD2; teichoic acid cholinephosphotransferase [EC:2.7.8.-]
D HMPREF1038_01352 conserved hypothetical membrane protein K25659 K25659; teichoic acid polymerase [EC:2.4.1.-]
D HMPREF1038_01865 putative membrane protein K25660 tacL; lipoteichoic acid ligase
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:spng00543]
D HMPREF1038_00614 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:spng00730]
D HMPREF1038_00742 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D HMPREF1038_01086 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF1038_00894 putative pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF1038_00895 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HMPREF1038_00733 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF1038_00740 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF1038_00734 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HMPREF1038_00741 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D HMPREF1038_01965 ribosome-associated GTP-binding protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HMPREF1038_01963 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D HMPREF1038_00287 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF1038_00732 putative transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D HMPREF1038_00738 tenA; transcriptional activator TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:spng00740]
D HMPREF1038_00239 ribA; 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HMPREF1038_00241 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HMPREF1038_00342 Cof family protein K21064 ycsE; 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.104]
D HMPREF1038_00238 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D HMPREF1038_00240 ribE; riboflavin synthase alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D HMPREF1038_01069 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D HMPREF1038_00733 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF1038_00740 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D HMPREF1038_01009 ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:spng00750]
D HMPREF1038_01581 pdxK; phosphomethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D HMPREF1038_02063 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D HMPREF1038_01454 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D HMPREF1038_01453 glutamine amidotransferase subunit PdxT (Glutamineamidotransferase glutaminase subunit pdxT) K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:spng00760]
D HMPREF1038_02012 nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D HMPREF1038_01407 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D HMPREF1038_00841 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF1038_00845 putative purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D HMPREF1038_01725 nadD; nicotinic acid mononucleotide adenyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D HMPREF1038_01406 nadE; NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D HMPREF1038_01082 inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:spng00770]
D HMPREF1038_00486 ilvB; acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D HMPREF1038_00487 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D HMPREF1038_00488 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D HMPREF1038_02142 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D HMPREF1038_00848 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D HMPREF1038_01234 phosphopantothenate--cysteine ligase K21977 coaB; phosphopantothenate---cysteine ligase (CTP) [EC:6.3.2.5]
D HMPREF1038_01235 phosphopantothenoylcysteine decarboxylase K01598 PPCDC; phosphopantothenoylcysteine decarboxylase [EC:4.1.1.36]
D HMPREF1038_01950 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D HMPREF1038_00991 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D HMPREF1038_01679 holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D HMPREF1038_00867 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00780 Biotin metabolism [PATH:spng00780]
D HMPREF1038_00466 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HMPREF1038_00465 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF1038_00803 oxidoreductase, short chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF1038_00468 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HMPREF1038_01872 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:spng00785]
D HMPREF1038_01036 lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF1038_01032 TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D HMPREF1038_01033 TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D HMPREF1038_01034 putative acetoin dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:spng00790]
D HMPREF1038_00347 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D HMPREF1038_00348 sulD; aldolase-pyrophosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D HMPREF1038_00345 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D HMPREF1038_01556 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF1038_00255 putative dihydrofolate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HMPREF1038_00346 sulB; dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D HMPREF1038_00239 ribA; 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D HMPREF1038_00691 pabB; para-aminobenzoate synthetase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D HMPREF1038_01737 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
C 00670 One carbon pool by folate [PATH:spng00670]
D HMPREF1038_01556 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D HMPREF1038_01233 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D HMPREF1038_00836 methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D HMPREF1038_01162 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D HMPREF1038_00113 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D HMPREF1038_00115 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF1038_01715 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF1038_00696 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D HMPREF1038_00611 methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D HMPREF1038_02106 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:spng00860]
D HMPREF1038_01176 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:spng00900]
D HMPREF1038_01707 mvaS; hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]
D HMPREF1038_01706 mvaA; hydroxymethylglutaryl-CoA reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D HMPREF1038_00432 mvaK1; mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D HMPREF1038_00434 mvaK2; phosphomevalonate kinase K00938 E2.7.4.2; phosphomevalonate kinase [EC:2.7.4.2]
D HMPREF1038_00433 mvaD; diphosphomevalonate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D HMPREF1038_00435 fni; isopentenyl pyrophosphate isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D HMPREF1038_01212 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF1038_00317 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D HMPREF1038_02143 tktC; transketolase, C-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_02144 tktN; putative transketolase N-terminal subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_02025 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D HMPREF1038_01602 tktA; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:spng00523]
D HMPREF1038_00410 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF1038_00412 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF1038_00411 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D HMPREF1038_00412 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D HMPREF1038_01676 putative acetyl xylan esterase K01060 cah; cephalosporin-C deacetylase [EC:3.1.1.41]
C 00332 Carbapenem biosynthesis [PATH:spng00332]
D HMPREF1038_00951 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D HMPREF1038_00952 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:spng00261]
D HMPREF1038_00457 lysC; aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D HMPREF1038_01171 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D HMPREF1038_01170 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D HMPREF1038_01542 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:spng00521]
D HMPREF1038_00695 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D HMPREF1038_01481 phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D HMPREF1038_01390 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D HMPREF1038_00410 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF1038_00412 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D HMPREF1038_00411 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D HMPREF1038_00695 gki; glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:spng00525]
D HMPREF1038_00410 rmlA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D HMPREF1038_00412 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis
D HMPREF1038_01361 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D HMPREF1038_01791 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HMPREF1038_01790 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D HMPREF1038_00464 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HMPREF1038_00465 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF1038_00803 oxidoreductase, short chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D HMPREF1038_00462 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D HMPREF1038_00103 acyl carrier protein (ACP) K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D HMPREF1038_00773 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:spng00362]
D HMPREF1038_00131 glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D HMPREF1038_01168 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00627 Aminobenzoate degradation
D HMPREF1038_01956 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:spng00625]
D HMPREF1038_00340 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF1038_02021 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D HMPREF1038_00131 glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation
C 00622 Xylene degradation [PATH:spng00622]
D HMPREF1038_00131 glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D HMPREF1038_01168 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D HMPREF1038_00131 glyoxalase family protein K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D HMPREF1038_01168 hypothetical protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:spng00626]
D HMPREF1038_00340 adhP; alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D HMPREF1038_02021 aldehyde-alcohol dehydrogenase 2 K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:spng03020]
D HMPREF1038_01942 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF1038_01941 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF1038_00291 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF1038_01717 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF1038_00527 DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:spng03010]
D HMPREF1038_00875 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF1038_02223 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF1038_00272 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF1038_00148 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF1038_00283 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF1038_01527 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF1038_00327 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF1038_00280 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF1038_00351 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF1038_00265 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF1038_00290 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF1038_00326 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF1038_00289 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF1038_00279 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF1038_01612 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF1038_00784 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF1038_00275 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF1038_01525 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF1038_00270 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF1038_00847 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF1038_01401 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HMPREF1038_00655 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF1038_00269 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF1038_00266 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF1038_00267 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF1038_00278 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF1038_00281 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF1038_01341 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF1038_02212 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF1038_01342 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF1038_00654 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF1038_00350 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF1038_00276 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF1038_00285 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF1038_00273 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF1038_00292 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF1038_00282 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF1038_01299 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF1038_00981 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF1038_01074 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF1038_00271 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF1038_00268 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF1038_00277 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF1038_01072 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF1038_00483 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF1038_00274 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF1038_00284 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF1038_01305 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF1038_02150 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF1038_02151 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF1038_01978 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF1038_00980 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF1038_02250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02258 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02261 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02255 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02251 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02257 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02254 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02253 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02252 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02259 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02256 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:spng00970]
D HMPREF1038_00016 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF1038_01891 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF1038_02076 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF1038_02001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF1038_01252 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_01993 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_02246 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_01298 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_01883 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_00017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF1038_02243 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF1038_01889 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF1038_01999 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF1038_01943 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF1038_00874 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF1038_02066 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF1038_00015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF1038_02002 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF1038_02077 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF1038_01892 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF1038_01885 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF1038_01876 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF1038_01995 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF1038_02074 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF1038_02067 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF1038_01875 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF1038_02073 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF1038_01884 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_02065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01994 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01566 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01887 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01997 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01888 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF1038_01756 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF1038_01998 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF1038_01881 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF1038_01880 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF1038_01878 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF1038_02071 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF1038_01877 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF1038_02070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF1038_01882 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF1038_01992 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF1038_01879 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF1038_01874 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF1038_00887 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF1038_02072 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF1038_01172 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF1038_01886 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF1038_01996 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF1038_02068 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF1038_00873 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF1038_02069 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF1038_01890 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF1038_02075 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF1038_02000 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF1038_02079 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HMPREF1038_00479 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF1038_00478 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF1038_00480 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF1038_01371 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF1038_02127 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF1038_01528 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HMPREF1038_01462 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HMPREF1038_01461 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HMPREF1038_01615 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF1038_00455 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF1038_00616 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF1038_00798 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF1038_01715 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D HMPREF1038_00593 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF1038_00312 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF1038_01643 ileS; isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF1038_00730 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF1038_02088 argS; arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF1038_00320 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF1038_02136 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF1038_00603 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF1038_00605 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF1038_02111 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF1038_02237 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:spng03060]
D HMPREF1038_00286 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HMPREF1038_02005 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HMPREF1038_00993 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HMPREF1038_00375 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HMPREF1038_02024 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF1038_02036 SpoJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF1038_01957 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF1038_01682 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF1038_01292 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF1038_00085 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF1038_01247 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF1038_00447 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF1038_00948 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:spng04122]
D HMPREF1038_01086 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF1038_00894 putative pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF1038_00190 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HMPREF1038_00895 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:spng03018]
D HMPREF1038_01050 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF1038_00613 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF1038_00994 rnr; exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HMPREF1038_01569 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HMPREF1038_01719 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HMPREF1038_00194 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF1038_00634 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF1038_00914 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF1038_00548 dnaK; chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF1038_01898 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:spng03030]
D HMPREF1038_01013 dnaQ; DNA-directed DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF1038_00913 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF1038_00329 dnaE; DNA-directed DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF1038_00877 dnaZX; DNA-directed DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF1038_00955 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF1038_00775 holA; DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF1038_00002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF1038_02211 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF1038_01108 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF1038_01526 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_01900 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_01040 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF1038_00448 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D HMPREF1038_00095 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF1038_01062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:spng03410]
D HMPREF1038_01283 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF1038_01027 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF1038_01231 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HMPREF1038_00990 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF1038_00243 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HMPREF1038_01811 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF1038_00095 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF1038_00633 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF1038_01062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:spng03420]
D HMPREF1038_00006 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF1038_00248 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D HMPREF1038_01242 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D HMPREF1038_00639 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D HMPREF1038_01092 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF1038_00095 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF1038_01062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:spng03430]
D HMPREF1038_02086 hexA; DNA mismatch repair protein HexA K03555 mutS; DNA mismatch repair protein MutS
D HMPREF1038_00451 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D HMPREF1038_00236 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HMPREF1038_01092 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF1038_01214 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF1038_01213 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF1038_00633 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF1038_01526 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_01900 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_00913 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF1038_00329 dnaE; DNA-directed DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF1038_00002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF1038_00877 dnaZX; DNA-directed DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF1038_00775 holA; DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF1038_00955 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF1038_01013 dnaQ; DNA-directed DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF1038_01062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF1038_01819 modification methylase DpnIIA (Adenine-specificmethyltransferase DpnIIA) K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:spng03440]
D HMPREF1038_00633 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF1038_01526 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_01900 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_02235 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF1038_00101 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF1038_01654 recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF1038_01930 recA; recombination protein A K03553 recA; recombination protein RecA
D HMPREF1038_00095 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF1038_00242 ruvA; holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF1038_00315 ruvB; holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF1038_01677 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF1038_00446 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HMPREF1038_00913 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF1038_00329 dnaE; DNA-directed DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF1038_00002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF1038_00877 dnaZX; DNA-directed DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF1038_00775 holA; DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF1038_00955 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF1038_01013 dnaQ; DNA-directed DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF1038_01716 priA; DNA replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:spng03250]
D HMPREF1038_00781 ppiA; cyclophilin-type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:spng02010]
D HMPREF1038_00301 iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF1038_01799 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF1038_00296 hypothetical protein K02011 afuB; iron(III) transport system permease protein
D HMPREF1038_01797 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D HMPREF1038_00297 iron ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D HMPREF1038_01798 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HMPREF1038_01374 potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HMPREF1038_01375 potC; spermidine/putrescine ABC transporter permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D HMPREF1038_01376 potB; spermidine/putrescine ABC transporter permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D HMPREF1038_01377 potA; spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HMPREF1038_01829 choline transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D HMPREF1038_01830 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HMPREF1038_01565 sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF1038_02120 maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF1038_02121 maltodextrin ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF1038_02122 maltodextrin ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF1038_01869 sugar ABC transporter, sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF1038_01868 sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF1038_01867 sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF1038_00154 ABC transporter, substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D HMPREF1038_00152 ABC transporter, permease protein K17319 lplB; putative aldouronate transport system permease protein
D HMPREF1038_00153 ABC transporter, permease protein K17320 lplC; putative aldouronate transport system permease protein
D HMPREF1038_00855 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF1038_00857 carbohydrate uptake 2 (CUT2) family, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF1038_00858 ABC transporter, permease protein, carbohydrate uptake 2 (CUT2) family K23536 nupC; general nucleoside transport system permease protein
D HMPREF1038_00856 sugar ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF1038_01388 pstS; phosphate ABC transporter phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF1038_02093 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF1038_01387 pstC; phosphate ABC transporter permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF1038_02094 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF1038_01386 pstA; phosphate ABC transporter permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF1038_02095 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF1038_01384 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF1038_01385 pstB2; phosphate ABC transporter ATP-binding protein PstB2 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF1038_02096 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF1038_01244 glutamine ABC transporter, glutamine-binding protein/permease protein K10036 glnH; glutamine transport system substrate-binding protein
D HMPREF1038_01245 glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_00631 amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D HMPREF1038_00629 amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D HMPREF1038_00630 amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D HMPREF1038_00632 glutamate transport ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_00222 ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HMPREF1038_01447 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D HMPREF1038_01446 L-cystine ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_01382 glnH; amino acid ABC transporter amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D HMPREF1038_00834 amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D HMPREF1038_00835 glutamine ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_00495 amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein K17073 lysX1; putative lysine transport system substrate-binding protein
D HMPREF1038_00494 amino acid ABC superfamily ATP binding cassette transporter, ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D HMPREF1038_00761 livK; branched-chain amino acid ABC transporter amino acid-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF1038_00762 high-affinity branched-chain amino acid ABC transporter, permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF1038_00763 livM; branched-chain amino acid ABC transporter permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF1038_00764 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF1038_00765 livF; branched-chain amino acid ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF1038_00223 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF1038_00226 D-methionine ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF1038_00225 D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF1038_00417 aliA; oligopeptide ABC transporter oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01512 oligopeptide ABC transporter, oligopeptide-binding protein AliB K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01863 oligopeptide ABC transporter, oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01862 oligopeptide ABC transporter, permease protein AmiC K15581 oppB; oligopeptide transport system permease protein
D HMPREF1038_01861 oligopeptide ABC transporter, permease protein AmiD K15582 oppC; oligopeptide transport system permease protein
D HMPREF1038_01860 oligopeptide ABC transporter, ATP-binding protein AmiE K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF1038_01859 oligopeptide ABC transporter, ATP-binding protein AmiF K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF1038_01155 iron ABC transporter substrate binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D HMPREF1038_01154 iron ABC transporter permease protein K23186 fepD; iron-siderophore transport system permease protein
D HMPREF1038_01153 iron ABC transporter permease protein K23187 fepG; iron-siderophore transport system permease protein
D HMPREF1038_01152 iron ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D HMPREF1038_01021 adhesion lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF1038_02179 adcA; zinc ABC superfamily ATP binding cassette transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF1038_02180 adcB; zinc ABC superfamily ATP binding cassette transporter, permease protein K09816 znuB; zinc transport system permease protein
D HMPREF1038_02181 adcC; zinc ABC superfamily ATP binding cassette transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HMPREF1038_01634 psaA; manganese ABC transporter substrate-binding protein K19971 psaA; manganese/zinc transport system substrate-binding protein
D HMPREF1038_01633 psaC; manganese ABC transporter permease protein K19972 psaC; manganese/zinc transport system permease protein
D HMPREF1038_01632 manganese ABC transporter, ATP-binding protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D HMPREF1038_00793 putative BioY family biotin synthase K03523 bioY; biotin transport system substrate-specific component
D HMPREF1038_00521 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF1038_02227 cobalt ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF1038_00737 cbiQ; cobalt ABC transporter permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF1038_01424 conserved hypothetical membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF1038_02229 cobalt import ATP-binding protein CbiO 2 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF1038_02228 cobalt import ATP-binding protein CbiO 1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF1038_01741 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D HMPREF1038_01742 putative ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D HMPREF1038_00932 putative ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D HMPREF1038_00931 ABC transporter, ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D HMPREF1038_00769 cell division ABC transporter, permease protein FtsX K09811 ftsX; cell division transport system permease protein
D HMPREF1038_00768 fstE; cell division ABC transporter ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF1038_01421 ABC transporter ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF1038_01422 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF1038_01807 ABC transporter, permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_01806 ABC transporter, permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_02085 ABC transporter ATP-binding/permease protein K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_02083 ABC transporter, permease/ATP-binding protein K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_01345 ABC transporter ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_01344 ABC transporter ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_00107 competence factor transporting permease/ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D HMPREF1038_00562 competence factor transporting permease/ATP-binding protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS) [PATH:spng02060]
D HMPREF1038_01186 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HMPREF1038_01187 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HMPREF1038_01666 PTS system, maltose and glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HMPREF1038_00770 PTS family glucose (glc) porter component IIABC K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D HMPREF1038_01702 PTS family sucrose (suc) porter component IIABC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HMPREF1038_00601 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D HMPREF1038_01851 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D HMPREF1038_01195 PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HMPREF1038_00512 PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HMPREF1038_00514 PTS system, lactose-specific IIBC components K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HMPREF1038_01194 PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HMPREF1038_00306 PTS family porter component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00358 PTS family porter component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_02020 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_01774 ptcA; PTS family cellobiose (cel) porter component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00307 PTS family porter component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00356 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_02019 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_01775 ptcB; PTS family cellobiose (cel) porter component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00308 PTS family porter component IIC K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_00360 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_00510 PTS system, cellobiose-specific, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_02018 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_01773 celB; PTS family cellobiose (cel) porter component IIC K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_01778 PTS system, cellobiose-specific, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_00128 PTS family mannose/fructose/sorbose family (man) porter component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF1038_02174 PTS family mannose/fructose/sorbose porter component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF1038_00339 manL; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HMPREF1038_00126 PTS family mannose/fructose/sorbose family (man) porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_00338 manM; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_02172 PTS family mannose/fructose/sorbose porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_02171 PTS family mannose/fructose/sorbose porter component IID K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00127 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00337 manN; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IID K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00370 PTS family sugar porter component IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D HMPREF1038_00372 PTS family sugar porter component IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D HMPREF1038_00373 PTS family sugar porter component IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D HMPREF1038_00374 PTS family sugar porter component IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D HMPREF1038_00669 putative PTS system IIA component K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D HMPREF1038_01205 putative PTS system IIA component K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D HMPREF1038_00670 putative PTS system, IIB component K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D HMPREF1038_01204 putative PTS system, IIB component K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D HMPREF1038_00671 ptkC; PTS family galactitol (gat) porter component IIC K20114 gatC; galactose PTS system EIIC component
D HMPREF1038_02031 PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HMPREF1038_02032 ascorbate-specific PTS system EIIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HMPREF1038_02146 PTS family sugar porter component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HMPREF1038_02033 putative transport protein SgaT protein K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF1038_02145 ulaA; putative PTS family L-ascorbate (L-asc) porter component IIC K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF1038_01604 PTS family fructose/mannitol (fru) porter component IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF1038_00890 fruI; PTS family fructose/mannitol (fru) porter component IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF1038_01605 PTS family fructose/mannitol (fru) porter component IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D HMPREF1038_01606 PTS family fructose/mannitol (fru) porter component IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D HMPREF1038_00889 fruK; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D HMPREF1038_01607 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:spng03070]
D HMPREF1038_02005 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HMPREF1038_00993 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HMPREF1038_00286 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HMPREF1038_00375 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HMPREF1038_02024 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF1038_02036 SpoJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF1038_01957 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF1038_01682 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF1038_01247 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF1038_01292 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:spng02020]
D HMPREF1038_02092 sensor histidine kinase PnpS K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HMPREF1038_02091 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D HMPREF1038_01388 pstS; phosphate ABC transporter phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF1038_02093 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF1038_02248 serine peptidase HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF1038_01229 sensory box histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D HMPREF1038_01230 DNA-binding response regulator VicR K07668 vicR; two-component system, OmpR family, response regulator VicR
D HMPREF1038_00001 replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF1038_00147 sensor histidine kinase K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D HMPREF1038_00146 DNA-binding response regulator SaeR K10682 saeR; two-component system, OmpR family, response regulator SaeR
D HMPREF1038_00932 putative ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D HMPREF1038_00931 ABC transporter, ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D HMPREF1038_01616 hk01; two-component signal (TCS01) sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D HMPREF1038_01617 rr01; two-component signal (TCS01) DNA-binding response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D HMPREF1038_02186 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF1038_02185 dltB; D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D HMPREF1038_02184 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF1038_02183 dltD; D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
D HMPREF1038_00809 ciaH; sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HMPREF1038_00808 ciaR; DNA-binding response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D HMPREF1038_00652 putative lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF1038_00559 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HMPREF1038_00558 response regulator BlpR K07707 agrA; two-component system, LytTR family, response regulator AgrA
D HMPREF1038_00107 competence factor transporting permease/ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D HMPREF1038_00108 comB; competence factor transport protein K12293 comB; competence factor transport accessory protein ComB
D HMPREF1038_02245 hypothetical protein K12415 comC; competence-stimulating peptide
D HMPREF1038_02244 putative sensor histidine kinase ComD K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D HMPREF1038_00014 transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D HMPREF1038_02003 transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D HMPREF1038_00010 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D HMPREF1038_01987 hk11; two-component signal (TCS11) sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D HMPREF1038_01986 rr11; two-component signal (TCS11) DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D HMPREF1038_00437 hk03; two-component signal (TCS03) sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D HMPREF1038_00438 rr03; two-component signal (TCS03) DNA-binding response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D HMPREF1038_00535 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF1038_00229 putative sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF1038_00688 hk09; two-component signal (TCS09) sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF1038_00230 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
D HMPREF1038_02023 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:spng02024]
D HMPREF1038_00388 S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D HMPREF1038_01791 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D HMPREF1038_01790 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D HMPREF1038_01680 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF1038_01681 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D HMPREF1038_00761 livK; branched-chain amino acid ABC transporter amino acid-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF1038_00762 high-affinity branched-chain amino acid ABC transporter, permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF1038_00763 livM; branched-chain amino acid ABC transporter permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF1038_00764 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF1038_00765 livF; branched-chain amino acid ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF1038_00241 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D HMPREF1038_00559 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HMPREF1038_00558 response regulator BlpR K07707 agrA; two-component system, LytTR family, response regulator AgrA
D HMPREF1038_01915 ply; pneumolysin K11031 slo; thiol-activated cytolysin
D HMPREF1038_02245 hypothetical protein K12415 comC; competence-stimulating peptide
D HMPREF1038_00107 competence factor transporting permease/ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D HMPREF1038_00108 comB; competence factor transport protein K12293 comB; competence factor transport accessory protein ComB
D HMPREF1038_02244 putative sensor histidine kinase ComD K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D HMPREF1038_00569 immunity protein BlpL K20341 blpL; immunity protein
D HMPREF1038_00809 ciaH; sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HMPREF1038_00808 ciaR; DNA-binding response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D HMPREF1038_00417 aliA; oligopeptide ABC transporter oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01512 oligopeptide ABC transporter, oligopeptide-binding protein AliB K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01863 oligopeptide ABC transporter, oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01862 oligopeptide ABC transporter, permease protein AmiC K15581 oppB; oligopeptide transport system permease protein
D HMPREF1038_01861 oligopeptide ABC transporter, permease protein AmiD K15582 oppC; oligopeptide transport system permease protein
D HMPREF1038_01860 oligopeptide ABC transporter, ATP-binding protein AmiE K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF1038_01859 oligopeptide ABC transporter, ATP-binding protein AmiF K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF1038_01973 plcR; putative transcriptional regulator PlcR K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D HMPREF1038_00014 transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D HMPREF1038_02003 transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D HMPREF1038_00560 hypothetical protein K20343 blpC; peptide pheromone BlpC
D HMPREF1038_00562 competence factor transporting permease/ATP-binding protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D HMPREF1038_00561 BlpC ABC transporter K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D HMPREF1038_02138 positive transcriptional regulator of glucosyltransferase and Spp phenotype K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D HMPREF1038_01064 putative transcriptional regulator MutR K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D HMPREF1038_01324 appA; ABC superfamily ATP binding cassette transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF1038_00868 ABC transporter substrate-binding protein - oligopeptid transport K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF1038_01323 appB; ABC superfamily ATP binding cassette transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF1038_01322 appC; ABC superfamily ATP binding cassette transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF1038_01321 appD; ABC superfamily ATP binding cassette transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF1038_01197 tagatose-bisphosphate aldolase K01635 lacD; tagatose 1,6-diphosphate aldolase [EC:4.1.2.40]
D HMPREF1038_02036 SpoJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF1038_01957 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF1038_02005 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HMPREF1038_00993 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HMPREF1038_00286 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HMPREF1038_00375 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HMPREF1038_02024 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF1038_01682 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF1038_01247 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF1038_01292 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
C 02040 Flagellar assembly [PATH:spng02040]
D HMPREF1038_00222 ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HMPREF1038_01107 rpoD; DNA-directed RNA polymerase sigma subunit RpoD K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D HMPREF1038_01050 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
D HMPREF1038_01802 cell wall surface anchor family protein K13925 pfbA; plasmin and fibronectin-binding protein A
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:spng01501]
D HMPREF1038_00010 beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D HMPREF1038_00417 aliA; oligopeptide ABC transporter oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01512 oligopeptide ABC transporter, oligopeptide-binding protein AliB K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01863 oligopeptide ABC transporter, oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01862 oligopeptide ABC transporter, permease protein AmiC K15581 oppB; oligopeptide transport system permease protein
D HMPREF1038_01861 oligopeptide ABC transporter, permease protein AmiD K15582 oppC; oligopeptide transport system permease protein
D HMPREF1038_01860 oligopeptide ABC transporter, ATP-binding protein AmiE K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF1038_01859 oligopeptide ABC transporter, ATP-binding protein AmiF K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF1038_00419 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF1038_02110 penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B
D HMPREF1038_02006 pbp2a; penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HMPREF1038_01655 penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D HMPREF1038_00384 pbpX; Penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
C 01502 Vancomycin resistance [PATH:spng01502]
D HMPREF1038_01653 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF1038_01678 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF1038_01652 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D HMPREF1038_00385 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF1038_00714 murG; UDP-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF1038_00652 putative lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:spng01503]
D HMPREF1038_02248 serine peptidase HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF1038_00781 ppiA; cyclophilin-type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF1038_02186 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF1038_02185 dltB; D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D HMPREF1038_02184 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF1038_02183 dltD; D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:spng01000]
C 01001 Protein kinases [BR:spng01001]
D HMPREF1038_01712 stkP; serine-threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D HMPREF1038_00399 wze; protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D HMPREF1038_02092 sensor histidine kinase PnpS K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HMPREF1038_01229 sensory box histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D HMPREF1038_00147 sensor histidine kinase K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D HMPREF1038_01616 hk01; two-component signal (TCS01) sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D HMPREF1038_00809 ciaH; sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HMPREF1038_01987 hk11; two-component signal (TCS11) sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D HMPREF1038_00437 hk03; two-component signal (TCS03) sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D HMPREF1038_00559 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HMPREF1038_02244 putative sensor histidine kinase ComD K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D HMPREF1038_00229 putative sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF1038_00688 hk09; two-component signal (TCS09) sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:spng01009]
D HMPREF1038_00914 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF1038_01713 prpC; serine-threonine phosphatase protein PrpC K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:spng01002]
D HMPREF1038_00948 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D HMPREF1038_00336 pepC; aminopeptidase PepC K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D HMPREF1038_00871 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D HMPREF1038_02057 pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D HMPREF1038_01432 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D HMPREF1038_01090 glutamine amidotransferase, class I K07010 K07010; putative glutamine amidotransferase
D HMPREF1038_02082 glutamine amidotransferase, class-I K07010 K07010; putative glutamine amidotransferase
D HMPREF1038_00107 competence factor transporting permease/ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D HMPREF1038_00562 competence factor transporting permease/ATP-binding protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D HMPREF1038_02224 secreted 45 kd protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF1038_00111 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D HMPREF1038_00322 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D HMPREF1038_00814 putative 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D HMPREF1038_01222 sortase SrtA K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF1038_00218 CAAX amino protease family protein K07052 K07052; CAAX protease family protein
D HMPREF1038_00219 putative membrane protein K07052 K07052; CAAX protease family protein
D HMPREF1038_00244 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D HMPREF1038_00344 putative membrane protein K07052 K07052; CAAX protease family protein
D HMPREF1038_00474 conserved hypothetical membrane protein K07052 K07052; CAAX protease family protein
D HMPREF1038_01333 putative membrane protein K07052 K07052; CAAX protease family protein
D HMPREF1038_01243 putative membrane protein K07052 K07052; CAAX protease family protein
D HMPREF1038_00945 putative membrane protein K07052 K07052; CAAX protease family protein
D HMPREF1038_00571 immunity protein BlpY K07052 K07052; CAAX protease family protein
D HMPREF1038_00573 CAAX amino protease family protein K07052 K07052; CAAX protease family protein
D HMPREF1038_02130 CAAX amino protease family protein K07052 K07052; CAAX protease family protein
D HMPREF1038_00807 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D HMPREF1038_00999 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D HMPREF1038_01631 pepO; endopeptidase O K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D HMPREF1038_00652 putative lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF1038_00643 dipeptidase PepV K01274 pepV; beta-Ala-Xaa dipeptidase [EC:3.4.13.-]
D HMPREF1038_00224 peptidase, M20/M25/M40 family K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D HMPREF1038_01177 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D HMPREF1038_02107 peptidase, M20/M25/M40 family K05823 dapL; N-acetyldiaminopimelate deacetylase [EC:3.5.1.47]
D HMPREF1038_01096 map; methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D HMPREF1038_00249 pepP; aminopeptidase P K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D HMPREF1038_01043 iga; IgA1 protease K01390 iga; IgA-specific metalloendopeptidase [EC:3.4.24.13]
D HMPREF1038_01042 zmpD; zinc metalloprotease K08643 zmpB; zinc metalloprotease ZmpB [EC:3.4.24.-]
D HMPREF1038_00690 zinc metalloprotease ZmpB K08643 zmpB; zinc metalloprotease ZmpB [EC:3.4.24.-]
D HMPREF1038_00333 pepS; aminopeptidase PepS K19689 ampS; aminopeptidase [EC:3.4.11.-]
D HMPREF1038_00013 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF1038_01834 glutamyl aminopeptidase K01261 pepA; glutamyl aminopeptidase [EC:3.4.11.7]
D HMPREF1038_00648 peptidase, M42 (glutamyl aminopeptidase) family K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D HMPREF1038_01288 htpX; heat shock protein HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D HMPREF1038_00319 eep; zinc metalloprotease Eep K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D HMPREF1038_02248 serine peptidase HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF1038_00884 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HMPREF1038_00759 clpP; S14 family endopeptidase ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D HMPREF1038_00912 x-prolyl-dipeptidyl aminopeptidase K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D HMPREF1038_01949 PDZ domain protein K07177 K07177; Lon-like protease
D HMPREF1038_00447 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D HMPREF1038_00063 bacteriophage maturation protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D HMPREF1038_01412 U32 family peptidase protein, truncation K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D HMPREF1038_01414 U32 family peptidase protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:spng01003]
D HMPREF1038_01104 putative glycosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D HMPREF1038_01105 cpoA; glycosyltransferase CpoA K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D HMPREF1038_01055 starch [bacterial glycogen] synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D HMPREF1038_00419 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF1038_02110 penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B
D HMPREF1038_02006 pbp2a; penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HMPREF1038_01805 putative glycosyl transferase K25627 wbgY; AATGal transferase
D HMPREF1038_00162 glycosyl transferase K25650 K25650; teichoic acid beta-1,3-glucosyltransferase [EC:2.4.1.-]
D HMPREF1038_01353 group 2 glycosyl transferase K25652 K25652; teichoic acid N-acetylgalactosaminyltransferase [EC:2.4.1.-]
D HMPREF1038_01354 group 1 glycosyl transferase K25653 K25653; teichoic acid N-acetylgalactosaminyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:spng01005]
D HMPREF1038_01591 gtrB; family 2 glycosyl transferase K12999 rgpI; glucosyltransferase [EC:2.4.1.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:spng01011]
D HMPREF1038_01099 murZ; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF1038_01947 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D HMPREF1038_01378 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D HMPREF1038_01504 UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D HMPREF1038_00713 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D HMPREF1038_01514 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K05362 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-L-lysine ligase [EC:6.3.2.7]
D HMPREF1038_01653 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D HMPREF1038_00636 beta-lactam resistance factor K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D HMPREF1038_00637 beta-lactam resistance factor K12554 murN; alanine adding enzyme [EC:2.3.2.-]
D HMPREF1038_01678 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D HMPREF1038_01848 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D HMPREF1038_00385 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D HMPREF1038_00714 murG; UDP-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D HMPREF1038_00500 bacitracin resistance protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF1038_00524 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D HMPREF1038_00419 pbp1A; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D HMPREF1038_02110 penicillin-binding protein 1B K03693 pbp1b; penicillin-binding protein 1B
D HMPREF1038_02006 pbp2a; penicillin-binding protein 2A K12555 pbp2A; penicillin-binding protein 2A [EC:2.4.99.28 3.4.16.4]
D HMPREF1038_01655 penicillin-binding protein 2B K00687 pbp2B; penicillin-binding protein 2B
D HMPREF1038_00384 pbpX; Penicillin-binding protein 2X K12556 pbp2X; penicillin-binding protein 2X
D HMPREF1038_00884 dacA; D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D HMPREF1038_00652 putative lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF1038_02224 secreted 45 kd protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D HMPREF1038_01222 sortase SrtA K07284 srtA; sortase A [EC:3.4.22.70]
D HMPREF1038_01501 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:spng01004]
D HMPREF1038_00464 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D HMPREF1038_00461 fabH; beta-ketoacyl-acyl-carrier-protein synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D HMPREF1038_00466 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D HMPREF1038_00465 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF1038_00803 oxidoreductase, short chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D HMPREF1038_00468 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D HMPREF1038_00463 fabK; enoyl-(acyl-carrier-protein) reductase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D HMPREF1038_00458 phaB; enoyl-CoA hydratase K18474 fabM; trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:5.3.3.14]
D HMPREF1038_00102 plsX; fatty acid/phospholipid synthesis protein K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D HMPREF1038_00863 conserved hypothetical membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D HMPREF1038_01610 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:spng01006]
D HMPREF1038_01212 geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D HMPREF1038_00317 di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D HMPREF1038_00698 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:spng01007]
D HMPREF1038_02079 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HMPREF1038_02111 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF1038_02237 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF1038_00616 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF1038_02088 argS; arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF1038_00798 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF1038_01643 ileS; isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF1038_00593 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF1038_00312 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF1038_00730 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF1038_02127 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF1038_01528 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HMPREF1038_02136 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF1038_01462 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HMPREF1038_01461 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HMPREF1038_00455 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF1038_00320 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF1038_01615 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF1038_01371 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF1038_00603 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF1038_00605 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF1038_01979 aspartate aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D HMPREF1038_00100 aspC; aspartate transaminase K00841 patA; aminotransferase [EC:2.6.1.-]
D HMPREF1038_01507 aminotransferase, class II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D HMPREF1038_00867 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D HMPREF1038_00691 pabB; para-aminobenzoate synthetase component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:spng00194]
D HMPREF1038_01489 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D HMPREF1038_01490 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D HMPREF1038_01491 ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D HMPREF1038_01492 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D HMPREF1038_01493 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D HMPREF1038_01494 ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D HMPREF1038_01496 hypothetical protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D HMPREF1038_01495 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:spng03000]
D HMPREF1038_01337 type II DNA modification methyltransferase Spn5252IP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF1038_01191 lactose phosphotransferase system repressor K02530 lacR; DeoR family transcriptional regulator, lactose phosphotransferase system repressor
D HMPREF1038_00888 fruR; DeoR family transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D HMPREF1038_01761 scrR; sucrose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF1038_01823 galactose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF1038_01985 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF1038_02124 maltose operon transcriptional repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D HMPREF1038_01705 Lasugar-binding transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D HMPREF1038_01852 trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D HMPREF1038_02016 transcriptional regulator, GntR family K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization
D HMPREF1038_01433 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D HMPREF1038_00534 transcriptional regulator GlnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor
D HMPREF1038_01825 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D HMPREF1038_00799 putative transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D HMPREF1038_00160 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D HMPREF1038_01622 iron-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D HMPREF1038_01872 biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D HMPREF1038_01133 pezA; pneumococcal epsilon antitoxin PezA K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D HMPREF1038_01973 plcR; putative transcriptional regulator PlcR K20342 comR; HTH-type transcriptional regulator, regulator for ComX
D HMPREF1038_02138 positive transcriptional regulator of glucosyltransferase and Spp phenotype K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D HMPREF1038_01064 putative transcriptional regulator MutR K20373 rgg2; HTH-type transcriptional regulator, SHP2-responsive activator
D HMPREF1038_01960 purR; purine operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D HMPREF1038_01089 CoA-binding domain protein K01926 rex; redox-sensing transcriptional repressor
D HMPREF1038_01568 GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D HMPREF1038_01156 hypothetical protein K07727 K07727; putative transcriptional regulator
D HMPREF1038_00381 transcriptional regulator, XRE family K07729 K07729; putative transcriptional regulator
D HMPREF1038_01409 putative transcriptional repressor K07729 K07729; putative transcriptional regulator
D HMPREF1038_02133 putative transcriptional regulator K07729 K07729; putative transcriptional regulator
D HMPREF1038_00600 transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D HMPREF1038_02027 transcriptional regulator, BglG family K03493 bglG1; transcriptional antiterminator
D HMPREF1038_00357 putative transcriptional regulator K03491 licR; probable licABCH operon transcriptional regulator
D HMPREF1038_02249 spspoJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF1038_01196 transcription antiterminator LacT K02531 lacT; transcriptional antiterminator
D HMPREF1038_00911 transcriptional regulator, ArgR family K03402 argR; transcriptional regulator of arginine metabolism
D HMPREF1038_01210 putative transcriptional repressor K03402 argR; transcriptional regulator of arginine metabolism
D HMPREF1038_02087 argR; arginine repressor (argR) K03402 argR; transcriptional regulator of arginine metabolism
D HMPREF1038_01779 putative ROK family protein K02565 nagC; N-acetylglucosamine repressor
D HMPREF1038_00546 hrcA; heat-inducible repressor K03705 hrcA; heat-inducible transcriptional repressor
D HMPREF1038_00732 putative transcriptional regulator K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D HMPREF1038_00738 tenA; transcriptional activator TenA K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D HMPREF1038_02204 transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D HMPREF1038_00929 PspC domain protein K03973 pspC; phage shock protein C
D HMPREF1038_01281 pyrimidine regulatory protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D HMPREF1038_01693 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D HMPREF1038_00014 transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
D HMPREF1038_02003 transcriptional regulator ComX1 K12296 comX1_2; competence protein ComX
C 03021 Transcription machinery [BR:spng03021]
D HMPREF1038_00291 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF1038_01942 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF1038_01941 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF1038_00527 DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D HMPREF1038_01717 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF1038_01107 rpoD; DNA-directed RNA polymerase sigma subunit RpoD K03086 rpoD; RNA polymerase primary sigma factor
D HMPREF1038_00577 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF1038_00475 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF1038_02004 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF1038_01500 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
C 03019 Messenger RNA biogenesis [BR:spng03019]
D HMPREF1038_01251 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF1038_00194 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF1038_00634 metallo-beta-lactamase superfamily protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D HMPREF1038_01719 hypothetical protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D HMPREF1038_00994 rnr; exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HMPREF1038_01961 cbf1; cmp-binding-factor 1 K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D HMPREF1038_01569 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HMPREF1038_00772 rhlB; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D HMPREF1038_01050 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF1038_00613 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D HMPREF1038_00914 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D HMPREF1038_00548 dnaK; chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF1038_01898 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF1038_01551 ATP-binding protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:spng03011]
D HMPREF1038_00875 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D HMPREF1038_02223 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D HMPREF1038_00272 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D HMPREF1038_00148 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D HMPREF1038_00283 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D HMPREF1038_01527 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D HMPREF1038_00327 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D HMPREF1038_00280 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D HMPREF1038_00351 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D HMPREF1038_00265 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D HMPREF1038_00290 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D HMPREF1038_00326 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D HMPREF1038_00289 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D HMPREF1038_00279 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D HMPREF1038_01612 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D HMPREF1038_00784 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D HMPREF1038_00275 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D HMPREF1038_01525 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D HMPREF1038_00270 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D HMPREF1038_00847 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D HMPREF1038_01401 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D HMPREF1038_00655 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D HMPREF1038_00269 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D HMPREF1038_00266 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D HMPREF1038_00267 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D HMPREF1038_00278 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D HMPREF1038_00281 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D HMPREF1038_02212 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D HMPREF1038_01342 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D HMPREF1038_00654 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D HMPREF1038_01341 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D HMPREF1038_00350 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D HMPREF1038_00276 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D HMPREF1038_00285 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D HMPREF1038_00273 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D HMPREF1038_00292 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D HMPREF1038_00282 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D HMPREF1038_01299 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D HMPREF1038_00981 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D HMPREF1038_01074 ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D HMPREF1038_00271 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D HMPREF1038_00268 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D HMPREF1038_00277 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D HMPREF1038_01072 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D HMPREF1038_00483 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D HMPREF1038_00274 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D HMPREF1038_00284 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D HMPREF1038_01305 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D HMPREF1038_02150 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D HMPREF1038_02151 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D HMPREF1038_01978 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D HMPREF1038_00980 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D HMPREF1038_02253 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02252 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02259 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02256 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02258 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02261 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02255 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02251 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02257 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02254 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:spng03009]
D HMPREF1038_01251 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF1038_00989 era; GTP-binding protein Era K03595 era; GTPase
D HMPREF1038_01101 obgE; GTP-binding protein ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D HMPREF1038_00577 transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D HMPREF1038_00475 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB
D HMPREF1038_02004 transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D HMPREF1038_00335 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HMPREF1038_00707 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D HMPREF1038_01968 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D HMPREF1038_01714 rsmB; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D HMPREF1038_00850 rRNA small subunit methyltransferase K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D HMPREF1038_01951 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D HMPREF1038_01745 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D HMPREF1038_01290 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF1038_00382 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D HMPREF1038_00957 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D HMPREF1038_01211 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D HMPREF1038_02114 rRNA (guanine-N1-)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D HMPREF1038_01443 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D HMPREF1038_02247 alpha/beta knot family protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D HMPREF1038_01366 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D HMPREF1038_00778 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D HMPREF1038_01158 rumA1; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D HMPREF1038_01841 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D HMPREF1038_01081 ribosomal large subunit pseudouridine synthase, RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF1038_00949 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF1038_02007 rluD; pseudouridylate synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D HMPREF1038_00199 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D HMPREF1038_00787 rimM; 16S rRNA-processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D HMPREF1038_01746 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D HMPREF1038_00253 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D HMPREF1038_00617 cysteine--tRNA ligase K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D HMPREF1038_01569 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D HMPREF1038_00772 rhlB; ATP-dependent RNA helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7]
D HMPREF1038_01965 ribosome-associated GTP-binding protein K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D HMPREF1038_01689 ribosome-associated GTPase EngA K03977 engA; GTPase
D HMPREF1038_01041 rbgA; GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
D HMPREF1038_00699 hflx; GTP-binding protein HflX K03665 hflX; GTPase
D HMPREF1038_01727 GTP-binding protein K06948 yqeH; 30S ribosome assembly GTPase
D HMPREF1038_01164 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF1038_01628 relA; GTP diphosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D HMPREF1038_00581 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D HMPREF1038_00576 SP14.3 protein K09748 rimP; ribosome maturation factor RimP
D HMPREF1038_02234 putative cytosolic protein K14761 rlbA; ribosome-associated protein
D HMPREF1038_01722 hypothetical protein K09710 ybeB; ribosome-associated protein
D HMPREF1038_00987 hypothetical protein K07042 ybeY; probable rRNA maturation factor
D HMPREF1038_01726 conserved hypothetical RNA-binding protein K07574 yhbY; RNA-binding protein
D HMPREF1038_02214 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D HMPREF1038_00004 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D HMPREF1038_01284 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:spng03016]
D HMPREF1038_00701 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D HMPREF1038_01541 polyA polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D HMPREF1038_00320 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D HMPREF1038_01643 ileS; isoleucine-tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D HMPREF1038_00312 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF1038_00798 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D HMPREF1038_02088 argS; arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF1038_00730 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D HMPREF1038_02127 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF1038_01371 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D HMPREF1038_01528 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D HMPREF1038_01615 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D HMPREF1038_00455 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D HMPREF1038_00616 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D HMPREF1038_00593 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D HMPREF1038_02136 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D HMPREF1038_00603 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D HMPREF1038_00605 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D HMPREF1038_02111 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF1038_02237 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D HMPREF1038_01627 D-tyrosyl-tRNA deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D HMPREF1038_00553 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF1038_00575 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D HMPREF1038_01582 truA; tRNA-pseudouridine synthase I K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D HMPREF1038_01217 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D HMPREF1038_01086 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF1038_00894 putative pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF1038_01164 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D HMPREF1038_00698 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D HMPREF1038_01169 thdF; thiophene and furan oxidation GTP-binding protein ThdF K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D HMPREF1038_00192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HMPREF1038_02037 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D HMPREF1038_00423 Bacterial RNase P class B K01978 rnpB; M1 RNA
D HMPREF1038_01462 glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D HMPREF1038_01461 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D HMPREF1038_02079 glutamate--tRNA ligase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D HMPREF1038_01005 ebsC; regulatory protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D HMPREF1038_00084 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D HMPREF1038_02197 tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D HMPREF1038_00963 tRNA:M(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HMPREF1038_00788 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D HMPREF1038_01596 SAM-dependent methyltransferase K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D HMPREF1038_00522 RNA methyltransferase, TrmH family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D HMPREF1038_01955 yjfA; putative rRNA/tRNA methylase K03437 spoU; RNA methyltransferase, TrmH family
D HMPREF1038_00190 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D HMPREF1038_01403 S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D HMPREF1038_01737 queF; NADPH-dependent 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D HMPREF1038_02055 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D HMPREF1038_00895 thiI; thiamine biosynthesis protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D HMPREF1038_00011 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D HMPREF1038_00198 universal bacterial protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D HMPREF1038_00200 putative glycoprotease GCP K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D HMPREF1038_01934 putative ATP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D HMPREF1038_01720 hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D HMPREF1038_00994 rnr; exoribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D HMPREF1038_00613 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:spng03012]
D HMPREF1038_00580 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF1038_00979 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF1038_01065 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D HMPREF1038_02222 translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF1038_01472 translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF1038_00328 fusA; elongation factor EF2 K02355 fusA; elongation factor G
D HMPREF1038_01166 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D HMPREF1038_00965 ribosome recycling factor K02838 frr; ribosome recycling factor
D HMPREF1038_01165 HemK protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D HMPREF1038_00005 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D HMPREF1038_00288 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D HMPREF1038_00477 efp; elongation factor P K02356 efp; elongation factor P
D HMPREF1038_00767 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D HMPREF1038_00481 prfC; peptide chain release factor RF3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:spng03110]
D HMPREF1038_02203 ATP-dependent Clp protease, ATP-binding subunit ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D HMPREF1038_00832 clpE; ATP-dependent protease ATP-binding subunit K03697 clpE; ATP-dependent Clp protease ATP-binding subunit ClpE
D HMPREF1038_00386 clpL; ATP-dependent Clp protease ATP-binding subunit K04086 clpL; ATP-dependent Clp protease ATP-binding subunit ClpL
D HMPREF1038_01554 ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D HMPREF1038_00548 dnaK; chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF1038_01898 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF1038_00550 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF1038_02196 chaperonin HslO K04083 hslO; molecular chaperone Hsp33
D HMPREF1038_00547 grpE; chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF1038_01899 chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF1038_02248 serine peptidase HtrA K04771 degP; serine protease Do [EC:3.4.21.107]
D HMPREF1038_00013 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D HMPREF1038_01495 ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D HMPREF1038_00122 strH; beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF1038_02152 putative glycosyl hydrolase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D HMPREF1038_00781 ppiA; cyclophilin-type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF1038_01523 Cof family protein/peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D HMPREF1038_01001 prsA; foldase protein prsA K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D HMPREF1038_01736 trxA; thioredoxin-disulfide reductase K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:spng04131]
D HMPREF1038_01940 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D HMPREF1038_02154 alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D HMPREF1038_02008 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF1038_01640 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D HMPREF1038_00915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
C 04121 Ubiquitin system
C 03051 Proteasome
C 03032 DNA replication proteins [BR:spng03032]
D HMPREF1038_01337 type II DNA modification methyltransferase Spn5252IP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF1038_01066 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HMPREF1038_00001 replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF1038_02211 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D HMPREF1038_00043 putative bacteriophage DNA replication protein K02315 dnaC; DNA replication protein DnaC
D HMPREF1038_01108 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D HMPREF1038_01692 putative replication initiation and membrane attachment protein K03346 dnaB; replication initiation and membrane attachment protein
D HMPREF1038_01691 primosomal protein DnaI K11144 dnaI; primosomal protein DnaI
D HMPREF1038_01526 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_01900 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_00913 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF1038_00329 dnaE; DNA-directed DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF1038_00002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF1038_00775 holA; DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF1038_00955 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF1038_01013 dnaQ; DNA-directed DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF1038_00877 dnaZX; DNA-directed DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF1038_01040 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D HMPREF1038_00448 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4]
D HMPREF1038_00095 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF1038_01062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF1038_01819 modification methylase DpnIIA (Adenine-specificmethyltransferase DpnIIA) K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HMPREF1038_01223 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF1038_00816 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF1038_00866 parC; DNA topoisomerase (ATP-hydrolyzing) ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HMPREF1038_00864 parE; DNA topoisomerase (ATP-hydrolyzing) ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HMPREF1038_01266 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:spng03036]
D HMPREF1038_01337 type II DNA modification methyltransferase Spn5252IP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF1038_01251 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D HMPREF1038_01066 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HMPREF1038_00001 replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D HMPREF1038_01557 non-heme iron-containing ferritin K04047 dps; starvation-inducible DNA-binding protein
D HMPREF1038_01250 smc; chromosome segregation protein Smc K03529 smc; chromosome segregation protein
D HMPREF1038_01843 ScpA/B protein K05896 scpA; segregation and condensation protein A
D HMPREF1038_01842 segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D HMPREF1038_01650 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HMPREF1038_00008 putative cell division protein DivIC K13052 divIC; cell division protein DivIC
D HMPREF1038_00768 fstE; cell division ABC transporter ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF1038_00892 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D HMPREF1038_00383 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D HMPREF1038_00715 cell division protein DivIB K03589 ftsQ; cell division protein FtsQ
D HMPREF1038_01113 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HMPREF1038_00769 cell division ABC transporter, permease protein FtsX K09811 ftsX; cell division transport system permease protein
D HMPREF1038_01649 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF1038_00817 ezrA; septation ring formation regulator EzrA K06286 ezrA; septation ring formation regulator
D HMPREF1038_01644 divIVA; cell-division initiation protein DivIVA K04074 divIVA; cell division initiation protein
D HMPREF1038_01647 hypothetical protein K09772 sepF; cell division inhibitor SepF
D HMPREF1038_02226 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D HMPREF1038_02225 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D HMPREF1038_00813 cell division protein, FtsW/RodA/SpoVE family K05837 rodA; rod shape determining protein RodA
D HMPREF1038_02249 spspoJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D HMPREF1038_00866 parC; DNA topoisomerase (ATP-hydrolyzing) ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HMPREF1038_00864 parE; DNA topoisomerase (ATP-hydrolyzing) ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HMPREF1038_00192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D HMPREF1038_01290 gidB; glucose-inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D HMPREF1038_00963 tRNA:M(5)U-54 methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D HMPREF1038_00905 integrase/recombinase, phage integrase family K03733 xerC; integrase/recombinase XerC
D HMPREF1038_00595 Fic-related cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D HMPREF1038_01553 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D HMPREF1038_01549 putative cytosolic protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:spng03400]
D HMPREF1038_01449 methylated-DNA--protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D HMPREF1038_01027 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D HMPREF1038_01231 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D HMPREF1038_01283 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D HMPREF1038_00753 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF1038_01239 MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF1038_00828 MutT/NUDIX family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF1038_01028 mutator MutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF1038_01747 MutT/nudix family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D HMPREF1038_00086 deoxyuridine 5`-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D HMPREF1038_00243 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D HMPREF1038_00990 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D HMPREF1038_01811 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D HMPREF1038_00633 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D HMPREF1038_01062 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D HMPREF1038_00095 polA; DNA-directed DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D HMPREF1038_00248 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D HMPREF1038_01242 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D HMPREF1038_00639 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D HMPREF1038_01092 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D HMPREF1038_01942 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D HMPREF1038_01941 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D HMPREF1038_00291 rpoA; DNA-directed RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D HMPREF1038_00527 DNA-directed RNA polymerase, delta subunit K03048 rpoE; DNA-directed RNA polymerase subunit delta
D HMPREF1038_01717 rpoZ; DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D HMPREF1038_00006 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D HMPREF1038_02086 hexA; DNA mismatch repair protein HexA K03555 mutS; DNA mismatch repair protein MutS
D HMPREF1038_00451 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D HMPREF1038_00236 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D HMPREF1038_01214 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D HMPREF1038_01213 exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D HMPREF1038_00913 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D HMPREF1038_00329 dnaE; DNA-directed DNA polymerase III alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D HMPREF1038_00002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D HMPREF1038_00775 holA; DNA-directed DNA polymerase III delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D HMPREF1038_00955 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D HMPREF1038_01013 dnaQ; DNA-directed DNA polymerase III epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D HMPREF1038_00877 dnaZX; DNA-directed DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D HMPREF1038_01526 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_01900 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_01819 modification methylase DpnIIA (Adenine-specificmethyltransferase DpnIIA) K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HMPREF1038_00446 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D HMPREF1038_01930 recA; recombination protein A K03553 recA; recombination protein RecA
D HMPREF1038_00242 ruvA; holliday junction DNA helicase motor protein K03550 ruvA; holliday junction DNA helicase RuvA
D HMPREF1038_00315 ruvB; holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D HMPREF1038_01716 priA; DNA replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D HMPREF1038_00088 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D HMPREF1038_02235 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D HMPREF1038_01677 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D HMPREF1038_00101 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D HMPREF1038_01654 recombination protein RecR K06187 recR; recombination protein RecR
D HMPREF1038_01209 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D HMPREF1038_00420 recU; recombination protein U K03700 recU; recombination protein U
D HMPREF1038_01045 ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D HMPREF1038_01046 ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D HMPREF1038_01223 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D HMPREF1038_00816 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D HMPREF1038_01266 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D HMPREF1038_01066 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D HMPREF1038_00502 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D HMPREF1038_01894 regulatory protein RecX K03565 recX; regulatory protein
D HMPREF1038_00812 bifunctional ATP-dependent DNA helicase/DNA polymerase III subunit epsilon K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D HMPREF1038_01189 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D HMPREF1038_01190 ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D HMPREF1038_01304 DHH subfamily 1 protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:spng03029]
D HMPREF1038_00580 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D HMPREF1038_00979 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D HMPREF1038_02222 translation elongation factor Ts K02357 tsf; elongation factor Ts
D HMPREF1038_01472 translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF1038_00328 fusA; elongation factor EF2 K02355 fusA; elongation factor G
D HMPREF1038_00989 era; GTP-binding protein Era K03595 era; GTPase
D HMPREF1038_02111 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D HMPREF1038_00312 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D HMPREF1038_02127 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D HMPREF1038_02088 argS; arginine-tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D HMPREF1038_00479 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D HMPREF1038_00478 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D HMPREF1038_00480 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D HMPREF1038_01526 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_01900 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D HMPREF1038_00548 dnaK; chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF1038_00547 grpE; chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D HMPREF1038_01898 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF1038_01899 chaperonin GroS K04078 groES; chaperonin GroES
D HMPREF1038_00550 dnaJ; chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D HMPREF1038_01086 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF1038_00894 putative pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF1038_02036 SpoJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF1038_01957 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:spng02000]
D HMPREF1038_01421 ABC transporter ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D HMPREF1038_01422 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D HMPREF1038_01807 ABC transporter, permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_01806 ABC transporter, permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_02085 ABC transporter ATP-binding/permease protein K18891 patA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_02083 ABC transporter, permease/ATP-binding protein K18892 patB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_01345 ABC transporter ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_01344 ABC transporter ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D HMPREF1038_01312 alpha-hemolysin translocation ATP-binding protein HlyB K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF1038_01910 ABC transporter, ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D HMPREF1038_00107 competence factor transporting permease/ATP-binding protein ComA K12292 comA; ATP-binding cassette, subfamily C, bacterial, competence factor transporting protein [EC:3.4.22.-]
D HMPREF1038_00562 competence factor transporting permease/ATP-binding protein ComA K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D HMPREF1038_00208 ABC transporter, ATP-binding protein K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D HMPREF1038_01540 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D HMPREF1038_00301 iron ABC transporter, iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF1038_01799 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D HMPREF1038_00296 hypothetical protein K02011 afuB; iron(III) transport system permease protein
D HMPREF1038_01797 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D HMPREF1038_00297 iron ABC transporter permease protein K02011 afuB; iron(III) transport system permease protein
D HMPREF1038_01798 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D HMPREF1038_01374 potD; spermidine/putrescine ABC transporter spermidine/putrescine-binding protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D HMPREF1038_01375 potC; spermidine/putrescine ABC transporter permease protein PotC K11070 potC; spermidine/putrescine transport system permease protein
D HMPREF1038_01376 potB; spermidine/putrescine ABC transporter permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D HMPREF1038_01377 potA; spermidine/putrescine ABC transporter ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D HMPREF1038_01829 choline transporter K05845 opuC; osmoprotectant transport system substrate-binding protein
D HMPREF1038_01830 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D HMPREF1038_01565 sugar ABC transporter, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D HMPREF1038_02120 maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D HMPREF1038_02121 maltodextrin ABC transporter, permease protein K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF1038_02122 maltodextrin ABC transporter, permease protein K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D HMPREF1038_01869 sugar ABC transporter, sugar-binding protein K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D HMPREF1038_01868 sugar ABC transporter, permease protein K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D HMPREF1038_01867 sugar ABC transporter, permease protein K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D HMPREF1038_00154 ABC transporter, substrate-binding protein K17318 lplA; putative aldouronate transport system substrate-binding protein
D HMPREF1038_00152 ABC transporter, permease protein K17319 lplB; putative aldouronate transport system permease protein
D HMPREF1038_00153 ABC transporter, permease protein K17320 lplC; putative aldouronate transport system permease protein
D HMPREF1038_01760 ABC superfamily ATP binding cassette transporter, substrate-binding protein K10120 msmE; fructooligosaccharide transport system substrate-binding protein
D HMPREF1038_01759 ABC superfamily ATP binding cassette transporter, permease protein K10121 msmF; fructooligosaccharide transport system permease protein
D HMPREF1038_01758 ABC superfamily ATP binding cassette transporter, permease protein K10122 msmG; fructooligosaccharide transport system permease protein
D HMPREF1038_00855 putative basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D HMPREF1038_00857 carbohydrate uptake 2 (CUT2) family, permease protein K23535 nupB; general nucleoside transport system permease protein
D HMPREF1038_00858 ABC transporter, permease protein, carbohydrate uptake 2 (CUT2) family K23536 nupC; general nucleoside transport system permease protein
D HMPREF1038_00856 sugar ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D HMPREF1038_01672 ABC transporter, substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF1038_01665 sugar ABC transporter, sugar-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D HMPREF1038_01664 sugar ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF1038_01671 ABC transporter, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D HMPREF1038_01663 sugar ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF1038_01670 ABC transporter, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D HMPREF1038_01388 pstS; phosphate ABC transporter phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF1038_02093 phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D HMPREF1038_01387 pstC; phosphate ABC transporter permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF1038_02094 phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D HMPREF1038_01386 pstA; phosphate ABC transporter permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF1038_02095 phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D HMPREF1038_01384 pstB; phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF1038_01385 pstB2; phosphate ABC transporter ATP-binding protein PstB2 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF1038_02096 phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D HMPREF1038_01244 glutamine ABC transporter, glutamine-binding protein/permease protein K10036 glnH; glutamine transport system substrate-binding protein
D HMPREF1038_01245 glutamine ABC transporter, ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_00631 amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D HMPREF1038_00629 amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D HMPREF1038_00630 amino acid ABC transporter, permease protein K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D HMPREF1038_00632 glutamate transport ATP-binding protein K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_00222 ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
D HMPREF1038_01447 amino acid ABC transporter, permease protein K10009 tcyB; L-cystine transport system permease protein
D HMPREF1038_01446 L-cystine ABC transporter, ATP-binding protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_01382 glnH; amino acid ABC transporter amino acid-binding protein K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D HMPREF1038_00834 amino acid ABC transporter, permease protein K17077 artQ; arginine/lysine/histidine transport system permease protein
D HMPREF1038_00835 glutamine ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_00761 livK; branched-chain amino acid ABC transporter amino acid-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D HMPREF1038_00762 high-affinity branched-chain amino acid ABC transporter, permease protein LivH K01997 livH; branched-chain amino acid transport system permease protein
D HMPREF1038_00763 livM; branched-chain amino acid ABC transporter permease protein LivM K01998 livM; branched-chain amino acid transport system permease protein
D HMPREF1038_00764 ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D HMPREF1038_00765 livF; branched-chain amino acid ABC transporter ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D HMPREF1038_00223 lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D HMPREF1038_00226 D-methionine ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D HMPREF1038_00225 D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D HMPREF1038_01111 putative ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D HMPREF1038_01110 ABC transporter permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D HMPREF1038_01109 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D HMPREF1038_01853 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D HMPREF1038_00495 amino acid ABC superfamily ATP binding cassette transporter, amino acid-binding protein K17073 lysX1; putative lysine transport system substrate-binding protein
D HMPREF1038_00494 amino acid ABC superfamily ATP binding cassette transporter, ATP-binding protein K17076 lysY; putative lysine transport system ATP-binding protein
D HMPREF1038_01483 amino acid ABC transporter, amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF1038_00641 ABC transporter, substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF1038_00724 amino acid ABC transporter substrate binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF1038_00173 amino acid ABC transporter, amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D HMPREF1038_00727 amino acid ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF1038_00728 glnP; amino acid ABC transporter permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF1038_01485 amino acid ABC transporter, permease protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D HMPREF1038_00725 glutamine ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_01484 glutamine ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D HMPREF1038_00417 aliA; oligopeptide ABC transporter oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01512 oligopeptide ABC transporter, oligopeptide-binding protein AliB K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01863 oligopeptide ABC transporter, oligopeptide-binding protein AmiA K15580 oppA; oligopeptide transport system substrate-binding protein
D HMPREF1038_01862 oligopeptide ABC transporter, permease protein AmiC K15581 oppB; oligopeptide transport system permease protein
D HMPREF1038_01861 oligopeptide ABC transporter, permease protein AmiD K15582 oppC; oligopeptide transport system permease protein
D HMPREF1038_01860 oligopeptide ABC transporter, ATP-binding protein AmiE K15583 oppD; oligopeptide transport system ATP-binding protein
D HMPREF1038_01859 oligopeptide ABC transporter, ATP-binding protein AmiF K10823 oppF; oligopeptide transport system ATP-binding protein
D HMPREF1038_01324 appA; ABC superfamily ATP binding cassette transporter, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF1038_00868 ABC transporter substrate-binding protein - oligopeptid transport K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D HMPREF1038_01323 appB; ABC superfamily ATP binding cassette transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D HMPREF1038_01322 appC; ABC superfamily ATP binding cassette transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D HMPREF1038_01321 appD; ABC superfamily ATP binding cassette transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D HMPREF1038_01155 iron ABC transporter substrate binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D HMPREF1038_01154 iron ABC transporter permease protein K23186 fepD; iron-siderophore transport system permease protein
D HMPREF1038_01153 iron ABC transporter permease protein K23187 fepG; iron-siderophore transport system permease protein
D HMPREF1038_01152 iron ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D HMPREF1038_01839 iron-compound ABC transporter, iron-compound-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D HMPREF1038_01837 iron-compound ABC transporter, permease protein K25283 yclO; iron-siderophore transport system permease protein
D HMPREF1038_01836 enterochelin ABC transporter, permease protein K25284 yclN; iron-siderophore transport system permease protein
D HMPREF1038_01838 ferrichrome transport ATP-binding protein FhuC K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D HMPREF1038_01021 adhesion lipoprotein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF1038_02179 adcA; zinc ABC superfamily ATP binding cassette transporter, substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D HMPREF1038_02180 adcB; zinc ABC superfamily ATP binding cassette transporter, permease protein K09816 znuB; zinc transport system permease protein
D HMPREF1038_02181 adcC; zinc ABC superfamily ATP binding cassette transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D HMPREF1038_01634 psaA; manganese ABC transporter substrate-binding protein K19971 psaA; manganese/zinc transport system substrate-binding protein
D HMPREF1038_01633 psaC; manganese ABC transporter permease protein K19972 psaC; manganese/zinc transport system permease protein
D HMPREF1038_01632 manganese ABC transporter, ATP-binding protein K10830 psaB; manganese/zinc transport system ATP-binding protein [EC:7.2.2.5]
D HMPREF1038_00793 putative BioY family biotin synthase K03523 bioY; biotin transport system substrate-specific component
D HMPREF1038_00518 putative membrane protein K16924 mtsT; energy-coupling factor transport system substrate-specific component
D HMPREF1038_01423 conserved hypothetical membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D HMPREF1038_00227 putative membrane protein K16926 htsT; energy-coupling factor transport system substrate-specific component
D HMPREF1038_00521 cobalt transport protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF1038_02227 cobalt ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF1038_00737 cbiQ; cobalt ABC transporter permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF1038_01424 conserved hypothetical membrane protein K16785 ecfT; energy-coupling factor transport system permease protein
D HMPREF1038_02229 cobalt import ATP-binding protein CbiO 2 K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF1038_02228 cobalt import ATP-binding protein CbiO 1 K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF1038_00520 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF1038_00736 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF1038_01425 cbiO; cobalt ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D HMPREF1038_00735 cbiM; cobalt ABC transporter permease protein K16925 ykoE; energy-coupling factor transport system permease protein
D HMPREF1038_01741 ABC-2 type transporter K09694 nodJ; lipooligosaccharide transport system permease protein
D HMPREF1038_01742 putative ABC transporter ATP-binding protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D HMPREF1038_00932 putative ABC transporter, permease protein K19084 braE; bacitracin transport system permease protein
D HMPREF1038_00931 ABC transporter, ATP-binding protein K19083 braD; bacitracin transport system ATP-binding protein
D HMPREF1038_00797 efflux ABC transporter permease protein K24948 yknZ; antimicrobial peptide resistance transport system permease protein
D HMPREF1038_00796 efflux ABC transporter ATP-binding protein K24949 yknY; antimicrobial peptide resistance transport system ATP-binding protein [EC:7.6.2.-]
D HMPREF1038_00769 cell division ABC transporter, permease protein FtsX K09811 ftsX; cell division transport system permease protein
D HMPREF1038_00768 fstE; cell division ABC transporter ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D HMPREF1038_00661 putative membrane protein K25154 evrC; viologen exporter family transport system permease protein
D HMPREF1038_00660 membrane protein K25155 evrB; viologen exporter family transport system permease protein
D HMPREF1038_00659 ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D HMPREF1038_00555 ABC transporter, permease protein K25157 ecsB; ABC-2 type transport system permease protein
D HMPREF1038_00554 ABC transporter, ATP-binding protein K25158 ecsA; ABC-2 type transport system ATP-binding protein
D HMPREF1038_01368 conserved hypothetical membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF1038_01410 conserved hypothetical membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF1038_01697 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF1038_01988 ABC superfamily ATP binding cassette transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF1038_00978 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D HMPREF1038_01698 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF1038_01695 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF1038_01369 putative ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF1038_00723 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF1038_01411 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF1038_01684 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF1038_01989 ABC superfamily ATP binding cassette transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF1038_00977 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF1038_01696 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D HMPREF1038_00711 bacteriocin-associated integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF1038_00622 transmembrane protein Vexp1 K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF1038_00624 transmembrane protein Vexp3 K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF1038_01937 putative bacteriocin-associated integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF1038_02009 conserved hypothetical membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D HMPREF1038_00712 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF1038_00172 amino acid ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF1038_00623 ABC transporter, ATP-binding protein Vexp2 K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF1038_01938 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF1038_01970 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF1038_01638 efflux ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D HMPREF1038_00879 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D HMPREF1038_01031 putative multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump
D HMPREF1038_01929 dinF; MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF1038_02062 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D HMPREF1038_01570 oxalate:formate antiporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D HMPREF1038_00161 putative transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D HMPREF1038_00992 pmrA; major facilitator superfamily multi-drug resistance efflux pump protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D HMPREF1038_01186 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D HMPREF1038_01187 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D HMPREF1038_01666 PTS system, maltose and glucose-specific IIBC component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D HMPREF1038_00770 PTS family glucose (glc) porter component IIABC K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D HMPREF1038_01702 PTS family sucrose (suc) porter component IIABC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D HMPREF1038_00601 PTS system, beta-glucoside-specific IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D HMPREF1038_01851 PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D HMPREF1038_01606 PTS family fructose/mannitol (fru) porter component IIA K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202]
D HMPREF1038_01604 PTS family fructose/mannitol (fru) porter component IIC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF1038_00890 fruI; PTS family fructose/mannitol (fru) porter component IIABC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D HMPREF1038_01605 PTS family fructose/mannitol (fru) porter component IIB K02769 fruAb; fructose PTS system EIIB component [EC:2.7.1.202]
D HMPREF1038_01195 PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HMPREF1038_00512 PTS system, lactose-specific IIA component K02786 lacF; lactose PTS system EIIA component [EC:2.7.1.207]
D HMPREF1038_00514 PTS system, lactose-specific IIBC components K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HMPREF1038_01194 PTS system, lactose-specific IIC component K02788 lacE; lactose PTS system EIICB component [EC:2.7.1.207]
D HMPREF1038_00306 PTS family porter component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00358 PTS family porter component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_02020 PTS system, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_01774 ptcA; PTS family cellobiose (cel) porter component IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00307 PTS family porter component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00356 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_02019 PTS system, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_01775 ptcB; PTS family cellobiose (cel) porter component IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D HMPREF1038_00308 PTS family porter component IIC K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_00360 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_00510 PTS system, cellobiose-specific, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_02018 PTS system, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_01773 celB; PTS family cellobiose (cel) porter component IIC K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_01778 PTS system, cellobiose-specific, IIC component K02761 celB; cellobiose PTS system EIIC component
D HMPREF1038_00669 putative PTS system IIA component K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D HMPREF1038_01205 putative PTS system IIA component K20112 gatA; galactose PTS system EIIA component [EC:2.7.1.204]
D HMPREF1038_00670 putative PTS system, IIB component K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D HMPREF1038_01204 putative PTS system, IIB component K20113 gatB; galactose PTS system EIIB component [EC:2.7.1.204]
D HMPREF1038_00671 ptkC; PTS family galactitol (gat) porter component IIC K20114 gatC; galactose PTS system EIIC component
D HMPREF1038_00339 manL; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D HMPREF1038_00128 PTS family mannose/fructose/sorbose family (man) porter component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF1038_02174 PTS family mannose/fructose/sorbose porter component IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D HMPREF1038_00126 PTS family mannose/fructose/sorbose family (man) porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_00338 manM; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_02172 PTS family mannose/fructose/sorbose porter component IIC K02795 manY; mannose PTS system EIIC component
D HMPREF1038_02171 PTS family mannose/fructose/sorbose porter component IID K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00127 PTS system, IID component K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00337 manN; PTS family glucose/mannose/2-deoxyglucose/fructose porter component IID K02796 manZ; mannose PTS system EIID component
D HMPREF1038_00370 PTS family sugar porter component IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-]
D HMPREF1038_00372 PTS family sugar porter component IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-]
D HMPREF1038_00373 PTS family sugar porter component IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component
D HMPREF1038_00374 PTS family sugar porter component IID K02747 agaE; N-acetylgalactosamine PTS system EIID component
D HMPREF1038_02031 PTS system, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D HMPREF1038_02032 ascorbate-specific PTS system EIIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HMPREF1038_02146 PTS family sugar porter component IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D HMPREF1038_02033 putative transport protein SgaT protein K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF1038_02145 ulaA; putative PTS family L-ascorbate (L-asc) porter component IIC K03475 ulaA; ascorbate PTS system EIIC component
D HMPREF1038_01607 ptsN; PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D HMPREF1038_01739 aqpz; aquaporin K06188 aqpZ; aquaporin Z
D HMPREF1038_01473 glycerol facilitator-aquaporin K02440 glpF; glycerol uptake facilitator
D HMPREF1038_02191 glycerol uptake facilitator K02440 glpF; glycerol uptake facilitator
D HMPREF1038_01225 putative ion transporter K10716 kch; voltage-gated potassium channel
D HMPREF1038_01175 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D HMPREF1038_01730 MscS family small conductance mechanosenstive ion channel K22044 ybiO; moderate conductance mechanosensitive channel
D HMPREF1038_00247 magnesium transporter, CorA family K03284 corA; magnesium transporter
D HMPREF1038_01301 crcB protein K06199 crcB; fluoride exporter
D HMPREF1038_01300 crcB protein K06199 crcB; fluoride exporter
D HMPREF1038_01944 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF1038_01826 cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D HMPREF1038_01732 DAACS family dicarboxylate/amino acid:sodium (Na+) or proton (H+) symporter K07862 sstT; serine/threonine transporter
D HMPREF1038_00682 transporter, monovalent cation:proton antiporter-2 (CPA2) family K24163 nhaK; monovalent cation/hydrogen antiporter
D HMPREF1038_00138 potassium uptake protein KtrB K03498 trkH; trk/ktr system potassium uptake protein
D HMPREF1038_00515 potassium uptake protein, Trk family K03498 trkH; trk/ktr system potassium uptake protein
D HMPREF1038_00139 potassium uptake protein, Trk family K03499 trkA; trk/ktr system potassium uptake protein
D HMPREF1038_00516 potassium uptake protein, Trk family K03499 trkA; trk/ktr system potassium uptake protein
D HMPREF1038_01291 pyrP; uracil permease protein K02824 uraA; uracil permease
D HMPREF1038_01816 xanthine permease K16169 pbuX; xanthine permease
D HMPREF1038_00343 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D HMPREF1038_01039 voltage-gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D HMPREF1038_00530 Na/Pi-cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D HMPREF1038_00221 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D HMPREF1038_00523 putative membrane protein K23675 fmnP; riboflavin transporter
D HMPREF1038_01237 putative membrane protein K16788 niaX; niacin transporter
D HMPREF1038_00933 putative membrane protein K22736 VIT; vacuolar iron transporter family protein
D HMPREF1038_01113 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D HMPREF1038_01306 hypothetical protein K07243 FTR; high-affinity iron transporter
D HMPREF1038_00355 glutathione synthase K15383 K15383; MtN3 and saliva related transmembrane protein
D HMPREF1038_01018 cytochrome c-type biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D HMPREF1038_00684 ccdA; cytochrome c-type biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein
D HMPREF1038_00561 BlpC ABC transporter K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D HMPREF1038_00795 HlyD family secretion protein K24950 yknX; membrane fusion protein, antimicrobial resistance system
D HMPREF1038_00399 wze; protein-tyrosine kinase K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D HMPREF1038_00398 wzd; capsular polysaccharide biosynthesis protein K19420 epsA; protein tyrosine kinase modulator
D HMPREF1038_01828 putative transporter K03811 pnuC; nicotinamide mononucleotide transporter
D HMPREF1038_01796 MgtC/SapB family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:spng02044]
D HMPREF1038_01646 hypothetical protein K02221 yggT; YggT family protein
D HMPREF1038_00974 competence protein CelA K02237 comEA; competence protein ComEA
D HMPREF1038_00757 comEB; late competence protein ComEB K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D HMPREF1038_00975 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D HMPREF1038_02216 competence protein F K02240 comFA; competence protein ComFA
D HMPREF1038_02215 putative competence protein ComF K02242 comFC; competence protein ComFC
D HMPREF1038_02050 competence protein CglA K02243 comGA; competence protein ComGA
D HMPREF1038_02049 competence protein CglB K02244 comGB; competence protein ComGB
D HMPREF1038_02048 competence protein CglC K02245 comGC; competence protein ComGC
D HMPREF1038_02047 competence protein CglD K02246 comGD; competence protein ComGD
D HMPREF1038_02045 ComG operon protein 6 K02248 comGF; competence protein ComGF
D HMPREF1038_01781 pilD; putative type IV prepilin peptidase K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D HMPREF1038_01682 preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D HMPREF1038_02005 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D HMPREF1038_00993 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D HMPREF1038_00286 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D HMPREF1038_01292 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D HMPREF1038_01247 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D HMPREF1038_00375 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D HMPREF1038_02024 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D HMPREF1038_02036 SpoJ protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
D HMPREF1038_01957 OxaA-like protein K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:spng02042]
D HMPREF1038_00454 C4-dicarboxylate/malic acid transport protein K11041 eta; exfoliative toxin A/B
D HMPREF1038_01915 ply; pneumolysin K11031 slo; thiol-activated cytolysin
D HMPREF1038_01944 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D HMPREF1038_01452 hemolysin III K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:spng02022]
D HMPREF1038_02092 sensor histidine kinase PnpS K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D HMPREF1038_02091 alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D HMPREF1038_01229 sensory box histidine kinase VicK K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D HMPREF1038_01230 DNA-binding response regulator VicR K07668 vicR; two-component system, OmpR family, response regulator VicR
D HMPREF1038_00147 sensor histidine kinase K10681 saeS; two-component system, OmpR family, sensor histidine kinase SaeS [EC:2.7.13.3]
D HMPREF1038_00146 DNA-binding response regulator SaeR K10682 saeR; two-component system, OmpR family, response regulator SaeR
D HMPREF1038_01616 hk01; two-component signal (TCS01) sensor histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D HMPREF1038_01617 rr01; two-component signal (TCS01) DNA-binding response regulator K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D HMPREF1038_00809 ciaH; sensor histidine kinase CiaH K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D HMPREF1038_00808 ciaR; DNA-binding response regulator CiaR K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D HMPREF1038_01987 hk11; two-component signal (TCS11) sensor histidine kinase K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D HMPREF1038_01986 rr11; two-component signal (TCS11) DNA-binding response regulator K07693 desR; two-component system, NarL family, response regulator DesR
D HMPREF1038_00437 hk03; two-component signal (TCS03) sensor histidine kinase K11617 liaS; two-component system, NarL family, sensor histidine kinase LiaS [EC:2.7.13.3]
D HMPREF1038_00438 rr03; two-component signal (TCS03) DNA-binding response regulator K11618 liaR; two-component system, NarL family, response regulator LiaR
D HMPREF1038_00559 histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D HMPREF1038_00558 response regulator BlpR K07707 agrA; two-component system, LytTR family, response regulator AgrA
D HMPREF1038_02244 putative sensor histidine kinase ComD K12294 comD; two-component system, LytTR family, sensor histidine kinase ComD [EC:2.7.13.3]
D HMPREF1038_00229 putative sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF1038_00688 hk09; two-component signal (TCS09) sensor histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D HMPREF1038_00230 DNA-binding response regulator K07720 yesN; two-component system, response regulator YesN
C 02035 Bacterial motility proteins [BR:spng02035]
D HMPREF1038_00222 ABC transporter, substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:spng04812]
D HMPREF1038_01649 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF1038_01650 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D HMPREF1038_02249 spspoJ protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:spng04147]
D HMPREF1038_01050 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D HMPREF1038_02008 gapA; glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D HMPREF1038_00532 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D HMPREF1038_00915 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D HMPREF1038_00781 ppiA; cyclophilin-type peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D HMPREF1038_01898 chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D HMPREF1038_00548 dnaK; chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D HMPREF1038_02080 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D HMPREF1038_02236 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D HMPREF1038_01472 translation elongation factor Tu K02358 tuf; elongation factor Tu
D HMPREF1038_00553 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D HMPREF1038_01224 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D HMPREF1038_00287 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D HMPREF1038_01562 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D HMPREF1038_02157 alpha-L-fucosidase (Alpha-L-fucosidefucohydrolase) K01206 FUCA; alpha-L-fucosidase [EC:3.2.1.51]
D HMPREF1038_01822 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D HMPREF1038_01058 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D HMPREF1038_02193 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D HMPREF1038_00535 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D HMPREF1038_00115 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D HMPREF1038_01035 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D HMPREF1038_01246 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D HMPREF1038_01559 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D HMPREF1038_01640 gpmA; phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:spng02048]
D HMPREF1038_00543 hsdR; type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D HMPREF1038_00907 type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HMPREF1038_00538 putative type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HMPREF1038_00540 putative type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HMPREF1038_00541 type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D HMPREF1038_00901 putative type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HMPREF1038_00542 hsdM; type I site-specific deoxyribonuclease methyltransferase subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D HMPREF1038_01817 type II restriction enzyme DpnII (Endonuclease DpnII) K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D HMPREF1038_01819 modification methylase DpnIIA (Adenine-specificmethyltransferase DpnIIA) K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D HMPREF1038_01818 DNA (cytosine-5-)-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HMPREF1038_01418 type II DNA modification methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HMPREF1038_02040 adenine-specific methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D HMPREF1038_01337 type II DNA modification methyltransferase Spn5252IP K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D HMPREF1038_00058 bacteriophage nuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D HMPREF1038_01226 toxin-antitoxin system, toxin component, RelE family K06218 relE; mRNA interferase RelE/StbE
D HMPREF1038_00028 addiction module toxin protein K06218 relE; mRNA interferase RelE/StbE
D HMPREF1038_00331 putative RelE/StbE family addiction module toxin protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D HMPREF1038_00330 putative RelB/DinJ family addiction module antitoxin protein K07473 dinJ; DNA-damage-inducible protein J
D HMPREF1038_00929 PspC domain protein K03973 pspC; phage shock protein C
D HMPREF1038_00904 toxin-antitoxin system, toxin component, Fic family K07341 doc; death on curing protein
D HMPREF1038_01132 pezT; pneumococcal zeta toxin PezT K16214 pezT; UDP-N-acetylglucosamine kinase [EC:2.7.1.176]
D HMPREF1038_01133 pezA; pneumococcal epsilon antitoxin PezA K18830 pezA; HTH-type transcriptional regulator / antitoxin PezA
D HMPREF1038_01649 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D HMPREF1038_00866 parC; DNA topoisomerase (ATP-hydrolyzing) ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HMPREF1038_00864 parE; DNA topoisomerase (ATP-hydrolyzing) ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HMPREF1038_01086 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D HMPREF1038_00894 putative pyridoxal-phosphate dependent aminotransferase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:spng04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:spng01504]
D HMPREF1038_00652 putative lipoprotein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D HMPREF1038_02186 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 K03367 dltA; D-alanine--poly(phosphoribitol) ligase subunit 1 [EC:6.1.1.13]
D HMPREF1038_02185 dltB; D-alanine transfer protein DltB K03739 dltB; membrane protein involved in D-alanine export
D HMPREF1038_02184 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 K14188 dltC; D-alanine--poly(phosphoribitol) ligase subunit 2 [EC:6.1.1.13]
D HMPREF1038_02183 dltD; D-alanine transfer protein DltD K03740 dltD; D-alanine transfer protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:spng03100]
D HMPREF1038_00016 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF1038_01891 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF1038_02076 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF1038_02001 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D HMPREF1038_01252 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_01993 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_02246 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_01298 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_01883 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D HMPREF1038_00017 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF1038_02243 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D HMPREF1038_01889 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF1038_01999 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D HMPREF1038_01943 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D HMPREF1038_00874 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF1038_02066 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D HMPREF1038_00015 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF1038_02002 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF1038_02077 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF1038_01892 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D HMPREF1038_01885 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF1038_01876 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF1038_01995 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF1038_02074 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D HMPREF1038_02067 tRNA-His K14226 tRNA-His; tRNA His
D HMPREF1038_01875 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF1038_02073 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D HMPREF1038_01884 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_02065 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01994 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01566 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01887 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01997 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D HMPREF1038_01888 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF1038_01756 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF1038_01998 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D HMPREF1038_01881 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF1038_01880 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF1038_01878 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF1038_02071 tRNA-Met K14230 tRNA-Met; tRNA Met
D HMPREF1038_01877 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF1038_02070 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D HMPREF1038_01882 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF1038_01992 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D HMPREF1038_01879 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF1038_01874 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF1038_00887 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF1038_02072 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D HMPREF1038_01172 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF1038_01886 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF1038_01996 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D HMPREF1038_02068 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D HMPREF1038_00873 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF1038_02069 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D HMPREF1038_01890 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF1038_02075 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF1038_02000 tRNA-Val K14237 tRNA-Val; tRNA Val
D HMPREF1038_02250 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02258 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02261 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02255 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D HMPREF1038_02260 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02251 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02257 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02254 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D HMPREF1038_02253 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02252 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02259 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_02256 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D HMPREF1038_00085 Bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D HMPREF1038_00423 Bacterial RNase P class B K01978 rnpB; M1 RNA
D HMPREF1038_00886 Rfam score 169 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D HMPREF1038_00369 gno; gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D HMPREF1038_00731 lctO; Lactate oxidase K10530 lctO; L-lactate oxidase [EC:1.1.3.2]
D HMPREF1038_00939 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D HMPREF1038_00686 peptide-methionine (S)-S-oxide reductasex K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D HMPREF1038_01346 peptide-methionine (S)-S-oxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D HMPREF1038_01537 ribosomal protein L29 K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D HMPREF1038_01635 psaD; thiol peroxidase protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D HMPREF1038_01548 pyridine nucleotide-disulfide oxidoreductase family protein K21567 fnr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D HMPREF1038_00263 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D HMPREF1038_00303 pflE; [Formate-C-acetyltransferase]-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HMPREF1038_01958 pflC; formate-C-acetyltransferase-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D HMPREF1038_00996 tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D HMPREF1038_00424 putative site-specific DNA-methyltransferase (adenine-specific) K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D HMPREF1038_00604 acetyltransferase, GNAT family K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D HMPREF1038_01399 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D HMPREF1038_01457 putative thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D HMPREF1038_00485 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D HMPREF1038_02189 GBSi1, group II intron, maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D HMPREF1038_01547 putative membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D HMPREF1038_01400 hprK; HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D HMPREF1038_00635 tributyrin esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D HMPREF1038_00397 wzh; protein-tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D HMPREF1038_01728 putative HAD superfamily hydrolase protein K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D HMPREF1038_02213 DHH subfamily 1 protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D HMPREF1038_01975 TatD family protein hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D HMPREF1038_01974 primase-related protein K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D HMPREF1038_00390 dexB; glucan 1,6-alpha-glucosidase K01215 dexB; glucan 1,6-alpha-glucosidase [EC:3.2.1.70]
D HMPREF1038_00418 cell wall surface anchor family protein K17624 engCP; endo-alpha-N-acetylgalactosaminidase [EC:3.2.1.97]
D HMPREF1038_00371 ugl; glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D HMPREF1038_00081 N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HMPREF1038_01928 lytA; N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D HMPREF1038_01536 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF1038_01442 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D HMPREF1038_01466 peptidoglycan N-acetylglucosamine deacetylase A K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D HMPREF1038_01552 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D HMPREF1038_00837 putative carbohydrate kinase K17758 nnrD; ADP-dependent NAD(P)H-hydrate dehydratase [EC:4.2.1.136]
D HMPREF1038_00364 hysA; hyaluronate lyase K01727 hysA; hyaluronate lyase [EC:4.2.2.1]
D HMPREF1038_02175 fucU; sugar ABC superfamily ATP binding cassette transporter, binding protein K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D HMPREF1038_01538 calcium-transporting ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D HMPREF1038_01609 ctpE; P-ATPase superfamily P-type ATPase metal cation transporter K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D HMPREF1038_00766 acuB; putative acetoin utilization protein AcuB K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D HMPREF1038_01590 ferredoxin K05337 fer; ferredoxin
D HMPREF1038_00882 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D HMPREF1038_01571 oxidoreductase, pyridine nucleotide-disulfide, class I K21739 rclA; probable pyridine nucleotide-disulfide oxidoreductase
C 99983 Lipid metabolism
D HMPREF1038_01543 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D HMPREF1038_01067 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
D HMPREF1038_00232 NrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
D HMPREF1038_01945 DNA-entry nuclease K15051 endA; DNA-entry nuclease
C 99985 Amino acid metabolism
D HMPREF1038_01648 ylmE; YlmE K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D HMPREF1038_01392 regulatorory protein Spx K16509 spxA; regulatory protein spx
D HMPREF1038_00250 regulatorory protein Spx K16509 spxA; regulatory protein spx
D HMPREF1038_01335 hypothetical protein K16509 spxA; regulatory protein spx
D HMPREF1038_00927 S1 RNA binding domain protein K06959 tex; protein Tex
C 99974 Translation
D HMPREF1038_01522 S1 RNA binding domain protein K07570 GSP13; general stress protein 13
C 99975 Protein processing
D HMPREF1038_00445 tig; trigger factor K03545 tig; trigger factor
D HMPREF1038_00995 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D HMPREF1038_01188 glutaredoxin K06191 nrdH; glutaredoxin-like protein NrdH
D HMPREF1038_01350 mecA; genetic competence negative regulator K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D HMPREF1038_01091 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D HMPREF1038_01962 ccs50; competence-induced protein ccs50 K09760 rmuC; DNA recombination protein RmuC
D HMPREF1038_01520 GIY-YIG domain protein K07461 K07461; putative endonuclease
D HMPREF1038_01269 putative DNA processing protein DprA K04096 smf; DNA processing protein
D HMPREF1038_01560 putative DNA replication protein DnaD K02086 dnaD; DNA replication protein
D HMPREF1038_01754 AAA family ATP-binding protein K07478 ycaJ; putative ATPase
D HMPREF1038_01497 putative IS1239, transposase K07482 K07482; transposase, IS30 family
D HMPREF1038_00935 putative IS1239, transposase K07482 K07482; transposase, IS30 family
D HMPREF1038_01578 degenerate transposase (Orf1) K07483 K07483; transposase
D HMPREF1038_00823 degenerate transposase (Orf1) K07483 K07483; transposase
D HMPREF1038_01430 IS66 family element, Orf2 K07484 K07484; transposase
D HMPREF1038_00822 IS66 family element, Orf2 K07484 K07484; transposase
D HMPREF1038_02221 IS66 family element K07484 K07484; transposase
D HMPREF1038_00202 IS1193, transposase, ISL3 family K07485 K07485; transposase
D HMPREF1038_00393 IS1167, transposase K07485 K07485; transposase
D HMPREF1038_00409 IS1167, transposase K07485 K07485; transposase
D HMPREF1038_00819 IS1167, transposase K07485 K07485; transposase
D HMPREF1038_00497 hypothetical protein K07486 K07486; transposase
D HMPREF1038_00498 degenerate transposase K07486 K07486; transposase
D HMPREF1038_00937 pilin protein inverting-related protein K07486 K07486; transposase
D HMPREF1038_01768 hypothetical protein K07487 K07487; transposase
D HMPREF1038_00365 truncated IS200 family transposase K07491 rayT; REP-associated tyrosine transposase
D HMPREF1038_01598 degenerate transposase K07497 K07497; putative transposase
D HMPREF1038_00826 putative transposase InsK for insertion sequence K07497 K07497; putative transposase
D HMPREF1038_00862 putative transposase InsK for insertion sequence K07497 K07497; putative transposase
D HMPREF1038_00597 putative transposase InsK for insertion sequence K07497 K07497; putative transposase
D HMPREF1038_00596 putative transposase InsK for insertion sequence K07497 K07497; putative transposase
D HMPREF1038_01002 putative transposase InsK for insertion sequence K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D HMPREF1038_01076 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D HMPREF1038_01020 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D HMPREF1038_00751 sodium-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D HMPREF1038_00452 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D HMPREF1038_00647 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D HMPREF1038_00425 hypothetical protein K20073 mapZ; mid-cell-anchored protein Z
D HMPREF1038_02035 putative jag protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D HMPREF1038_00708 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D HMPREF1038_00293 ACT domain protein K07166 K07166; ACT domain-containing protein
D HMPREF1038_00968 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D HMPREF1038_01007 hypothetical protein K07273 acm; lysozyme
C 99994 Others
D HMPREF1038_01383 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D HMPREF1038_02097 phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D HMPREF1038_01264 cutC; copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D HMPREF1038_01902 tRNA binding domain protein K06878 K06878; tRNA-binding protein
D HMPREF1038_00883 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D HMPREF1038_00880 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D HMPREF1038_00683 ribonuclease BN family protein K07058 K07058; membrane protein
D HMPREF1038_00155 rhodanese family protein K07146 K07146; UPF0176 protein
D HMPREF1038_01289 lemA protein K03744 lemA; LemA protein
D HMPREF1038_00928 SprT family protein K03095 sprL; SprT-like protein
D HMPREF1038_02241 putative membrane protein K01421 yhgE; putative membrane protein
D HMPREF1038_01006 conserved hypothetical membrane protein K08974 K08974; putative membrane protein
D HMPREF1038_00923 hypothetical protein K08986 ycgQ; putative membrane protein
D HMPREF1038_02058 putative membrane protein K08987 K08987; putative membrane protein
D HMPREF1038_01587 phnA; phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D HMPREF1038_01295 metal-dependent phosphohydrolase K06885 K06885; uncharacterized protein
D HMPREF1038_01954 membrane protein K06890 K06890; uncharacterized protein
D HMPREF1038_00096 putative CoA binding protein K06929 K06929; uncharacterized protein
D HMPREF1038_00785 putative RNA binding protein K06960 K06960; uncharacterized protein
D HMPREF1038_00924 putative permease protein K07089 K07089; uncharacterized protein
D HMPREF1038_01770 conserved hypothetical membrane protein K07090 K07090; uncharacterized protein
D HMPREF1038_01846 phosphoesterase family protein K07095 K07095; uncharacterized protein
D HMPREF1038_01238 transcriptional regulator, biotin repressor family K07105 K07105; uncharacterized protein
D HMPREF1038_01613 hypothetical protein K07118 K07118; uncharacterized protein
D HMPREF1038_00702 short chain dehydrogenase/reductase family protein K07124 K07124; uncharacterized protein
D HMPREF1038_00678 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D HMPREF1038_01840 putative toxin-antitoxin system, toxin component K08998 K08998; uncharacterized protein
D HMPREF1038_00587 putative hemerythrin HHE cation binding domain protein K09155 K09155; uncharacterized protein
D HMPREF1038_00294 hypothetical protein K09157 K09157; uncharacterized protein
D HMPREF1038_02155 hypothetical protein K09704 K09704; uncharacterized protein
D HMPREF1038_02090 cupin superfamily (DUF985) K09705 K09705; uncharacterized protein
D HMPREF1038_01293 YlxM/p13-like protein K09787 K09787; uncharacterized protein
D HMPREF1038_01265 putative membrane protein K09790 K09790; uncharacterized protein
D HMPREF1038_00966 s1 RNA binding domain protein K00243 K00243; uncharacterized protein
D HMPREF1038_01533 protein YaaA K09861 K09861; uncharacterized protein
D HMPREF1038_00316 hypothetical protein K09962 K09962; uncharacterized protein
D HMPREF1038_01849 hypothetical protein K09976 K09976; uncharacterized protein
D HMPREF1038_01073 hypothetical protein K07584 ysxB; uncharacterized protein
D HMPREF1038_01895 hypothetical protein K07586 ygaC; uncharacterized protein
D HMPREF1038_00578 cytosolic protein YlxR K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024