+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Tolumonas auensis

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E Tola_0849 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D Tola_1551 histone family protein nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D Tola_2590 histone family protein DNA-binding protein K05787 hupA; DNA-binding protein HU-alpha D Tola_0722 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Tola_1086 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D Tola_1724 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Tola_1556 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D Tola_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D Tola_0425 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D Tola_0325 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein D Tola_0773 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein D Tola_2534 transcriptional regulator, Fis family K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Tola_2385 RNA chaperone Hfq K03666 hfq; host factor-I protein D Tola_2620 RNA chaperone Hfq K03666 hfq; host factor-I protein D Tola_0374 transcriptional regulator, ArgP, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D Tola_2314 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Tola_0545 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Tola_1630 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Tola_0925 37 kDa nucleoid-associated protein K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D Tola_1463 chromosome segregation and condensation protein MukB domain protein K03632 mukB; chromosome partition protein MukB D Tola_1462 chromosome segregation and condensation protein MukE K03804 mukE; chromosome partition protein MukE D Tola_1461 chromosome segregation and condensation protein MukF K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D Tola_0528 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Tola_2741 Septum formation initiator K05589 ftsB; cell division protein FtsB D Tola_3012 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Tola_0519 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Tola_2313 cell divisionFtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Tola_0518 cell division protein FtsL K03586 ftsL; cell division protein FtsL D Tola_0471 Sporulation domain protein K03591 ftsN; cell division protein FtsN D Tola_0527 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D Tola_0524 cell division protein FtsW K03588 ftsW; cell division protein FtsW D Tola_3011 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein D Tola_0529 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Tola_0630 cell division protein ZipA K03528 zipA; cell division protein ZipA D Tola_0927 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA D Tola_2759 protein of unknown function DUF904 K09892 zapB; cell division protein ZapB D Tola_1544 protein of unknown function DUF1379 K18657 zapC; cell division protein ZapC D Tola_2388 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Tola_0354 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tola_2907 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system D Tola_1355 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D Tola_1561 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Tola_1562 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Tola_1563 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor C Other chromosome partitioning proteins D Tola_0861 SeqA family protein K03645 seqA; negative modulator of initiation of replication D Tola_0253 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins D Tola_0254 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Tola_0255 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Tola_2829 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D Tola_3142 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein D Tola_3141 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Tola_0463 DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Tola_0396 DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Tola_3144 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Tola_3143 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Tola_3119 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D Tola_0972 tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D Tola_1530 Mrp protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D Tola_2271 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Tola_1190 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Tola_0337 GTP-binding protein HSR1-related K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024