+D GENES KO
#
KEGG Orthology (KO) - Trueperella bialowiezensis
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:tbw00010]
D NCTC13354_01455 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_01260 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_00459 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NCTC13354_00460 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NCTC13354_00210 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D NCTC13354_01288 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NCTC13354_00084 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NCTC13354_00082 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NCTC13354_00083 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NCTC13354_00841 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NCTC13354_00713 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NCTC13354_00065 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NCTC13354_01359 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NCTC13354_00244 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NCTC13354_00226 dlaT; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_00784 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NCTC13354_01639 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D NCTC13354_01820 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NCTC13354_01165 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NCTC13354_00510 ppgK_2; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D NCTC13354_00233 ppgK_1; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D NCTC13354_01632 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:tbw00020]
D NCTC13354_00643 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D NCTC13354_00185 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D NCTC13354_00659 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NCTC13354_01464 kgd; 2-oxoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_00466 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NCTC13354_00467 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NCTC13354_00494 frdA_1; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NCTC13354_01535 frdA_2; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NCTC13354_00493 frdB_1; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NCTC13354_01536 frdB_2; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NCTC13354_00495 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NCTC13354_01534 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NCTC13354_00479 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NCTC13354_01638 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NCTC13354_01632 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D NCTC13354_00244 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NCTC13354_00226 dlaT; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:tbw00030]
D NCTC13354_00459 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NCTC13354_00087 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NCTC13354_01160 yqjI; 6-phosphogluconate dehydrogenase, decarboxylating 2 K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NCTC13354_00117 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NCTC13354_00089 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NCTC13354_00088 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NCTC13354_00421 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NCTC13354_01660 deoC; Deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D NCTC13354_01165 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NCTC13354_00724 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NCTC13354_01129 eda; Putative KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NCTC13354_00259 ydjH; Uncharacterized sugar kinase ydjH K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D NCTC13354_01130 iolC_1; 5-dehydro-2-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D NCTC13354_01339 iolC_2; 5-dehydro-2-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D NCTC13354_01288 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NCTC13354_00460 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NCTC13354_00210 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:tbw00040]
D NCTC13354_01153 uxaC; Uronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D NCTC13354_01128 uxuA; Mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D NCTC13354_01127 por; Polyol:NADP oxidoreductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D NCTC13354_00410 uidA; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
D NCTC13354_01738 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NCTC13354_00117 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
C 00051 Fructose and mannose metabolism [PATH:tbw00051]
D NCTC13354_00688 rbsK; Ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NCTC13354_00793 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NCTC13354_01661 Probable phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NCTC13354_01653 manC1; Mannose-1-phosphate guanylyltransferase 1 K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D NCTC13354_00460 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NCTC13354_00210 pfp; Pyrophosphate--fructose 6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90]
D NCTC13354_01288 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NCTC13354_00084 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NCTC13354_00421 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NCTC13354_00478 alsE; D-allulose-6-phosphate 3-epimerase K17195 alsE; D-allulose-6-phosphate 3-epimerase [EC:5.1.3.-]
C 00052 Galactose metabolism [PATH:tbw00052]
D NCTC13354_01820 putative aldose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D NCTC13354_01876 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NCTC13354_01738 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NCTC13354_01165 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NCTC13354_01455 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_01260 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_00460 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NCTC13354_01499 malL; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism
D NCTC13354_00410 uidA; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00500 Starch and sucrose metabolism [PATH:tbw00500]
D NCTC13354_01499 malL; Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D NCTC13354_01738 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NCTC13354_01021 bglB; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NCTC13354_01809 bglX; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NCTC13354_00025 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D NCTC13354_01506 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NCTC13354_01510 malP; Maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D NCTC13354_01508 treS; Trehalose synthase/amylase TreS K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D NCTC13354_00431 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D NCTC13354_01507 pep2; Maltokinase K16146 pep2; maltokinase [EC:2.7.1.175]
D NCTC13354_01509 glgE2; Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 2 K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D NCTC13354_00026 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D NCTC13354_01512 glgX_2; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D NCTC13354_00179 glgX_1; Glycogen debranching enzyme K01214 ISA; isoamylase [EC:3.2.1.68]
D NCTC13354_00180 treY; Maltooligosyl trehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D NCTC13354_00181 treZ; Malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D NCTC13354_01165 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NCTC13354_01455 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_01260 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_00459 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NCTC13354_00688 rbsK; Ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tbw00520]
D NCTC13354_01458 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D NCTC13354_01457 nagB; Glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D NCTC13354_00688 rbsK; Ribokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D NCTC13354_00503 glmM; Phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D NCTC13354_00725 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NCTC13354_01757 murAA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NCTC13354_00578 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NCTC13354_01456 nanE; Putative N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9]
D NCTC13354_00628 dapH; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D NCTC13354_01455 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_01260 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_00510 ppgK_2; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D NCTC13354_00233 ppgK_1; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D NCTC13354_01165 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NCTC13354_01738 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NCTC13354_01876 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NCTC13354_00459 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NCTC13354_00793 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NCTC13354_01661 Probable phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NCTC13354_01653 manC1; Mannose-1-phosphate guanylyltransferase 1 K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D NCTC13354_00025 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:tbw00620]
D NCTC13354_00244 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NCTC13354_00226 dlaT; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_00449 pflB_2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NCTC13354_01639 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D NCTC13354_00474 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NCTC13354_00473 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NCTC13354_00065 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NCTC13354_01641 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D NCTC13354_01343 ctfB; Butyrate--acetoacetate CoA-transferase subunit B K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D NCTC13354_00784 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NCTC13354_00151 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D NCTC13354_01617 maeB; NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D NCTC13354_01638 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NCTC13354_00479 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NCTC13354_01632 pckG; Phosphoenolpyruvate carboxykinase [GTP] K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D NCTC13354_01359 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_01848 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tbw00630]
D NCTC13354_01638 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NCTC13354_00643 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D NCTC13354_00185 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_01642 accD5; Probable propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D NCTC13354_01641 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D NCTC13354_00247 5'-nucleotidase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D NCTC13354_01649 glyA1; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NCTC13354_01803 gcvP; Glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D NCTC13354_01802 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_01801 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D NCTC13354_01347 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NCTC13354_01129 eda; Putative KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D NCTC13354_01464 kgd; 2-oxoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D NCTC13354_01647 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:tbw00640]
D NCTC13354_01343 ctfB; Butyrate--acetoacetate CoA-transferase subunit B K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
D NCTC13354_00474 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NCTC13354_00473 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_00449 pflB_2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NCTC13354_01641 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D NCTC13354_01642 accD5; Probable propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D NCTC13354_00467 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NCTC13354_00466 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NCTC13354_00784 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NCTC13354_00508 mgsA; Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:tbw00650]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_00494 frdA_1; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NCTC13354_01535 frdA_2; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NCTC13354_00493 frdB_1; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NCTC13354_01536 frdB_2; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NCTC13354_00495 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NCTC13354_01534 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NCTC13354_01144 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NCTC13354_00742 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NCTC13354_00449 pflB_2; Formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D NCTC13354_00455 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NCTC13354_00454 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:tbw00660]
D NCTC13354_00455 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NCTC13354_00454 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NCTC13354_00467 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NCTC13354_00466 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NCTC13354_01754 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NCTC13354_01755 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NCTC13354_00451 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:tbw00562]
D NCTC13354_00602 suhB_1; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NCTC13354_01217 suhB_2; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NCTC13354_00084 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:tbw00190]
D NCTC13354_01419 ndhC; NAD(P)H-quinone oxidoreductase subunit 3 K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D NCTC13354_01420 nqo6; NADH-quinone oxidoreductase subunit 6 K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D NCTC13354_01421 nuoC; NADH-quinone oxidoreductase subunit C/D K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D NCTC13354_01422 nqo4; NADH-quinone oxidoreductase subunit 4 K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D NCTC13354_01423 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D NCTC13354_01424 nuoF; NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D NCTC13354_01425 nqo3; NADH-quinone oxidoreductase subunit 3 K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D NCTC13354_01426 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D NCTC13354_01427 nqo9; NADH-quinone oxidoreductase subunit 9 K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D NCTC13354_01428 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D NCTC13354_01429 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D NCTC13354_01430 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D NCTC13354_01431 ndhD1; NAD(P)H-quinone oxidoreductase chain 4 1 K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D NCTC13354_01432 nuoN; NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D NCTC13354_01358 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D NCTC13354_00494 frdA_1; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NCTC13354_01535 frdA_2; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NCTC13354_00493 frdB_1; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NCTC13354_01536 frdB_2; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NCTC13354_00495 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NCTC13354_01534 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NCTC13354_01775 appC; Cytochrome bd-II oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NCTC13354_01774 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NCTC13354_01487 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NCTC13354_01489 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NCTC13354_01488 atpG; F-ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NCTC13354_01486 atpH; F-type ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NCTC13354_01490 atpC; F-ATPase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NCTC13354_01483 atpB; F-ATPase subunit 6 K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NCTC13354_01485 atpF; F-type ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NCTC13354_01484 atpE; Lipid-binding protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NCTC13354_01369 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D NCTC13354_01323 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:tbw00710]
D NCTC13354_00083 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NCTC13354_00082 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NCTC13354_01288 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NCTC13354_00089 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D NCTC13354_00421 rpiB; Ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D NCTC13354_00084 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NCTC13354_00117 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D NCTC13354_00088 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D NCTC13354_01359 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NCTC13354_01638 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:tbw00720]
D NCTC13354_01359 ppdK; Pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D NCTC13354_01638 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NCTC13354_00479 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D NCTC13354_00494 frdA_1; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NCTC13354_01535 frdA_2; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D NCTC13354_00493 frdB_1; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NCTC13354_01536 frdB_2; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D NCTC13354_00495 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NCTC13354_01534 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D NCTC13354_00466 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D NCTC13354_00467 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_00659 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NCTC13354_00185 acnA; Aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D NCTC13354_01805 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D NCTC13354_01650 folD; Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NCTC13354_01505 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D NCTC13354_00473 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NCTC13354_00474 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00680 Methane metabolism [PATH:tbw00680]
D NCTC13354_01649 glyA1; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NCTC13354_00713 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NCTC13354_01638 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NCTC13354_01288 fba; Fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D NCTC13354_00460 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NCTC13354_00474 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D NCTC13354_00473 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NCTC13354_00841 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NCTC13354_00305 serA_1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NCTC13354_00791 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NCTC13354_00024 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D NCTC13354_00400 F420-0--gamma-glutamyl ligase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34]
C 00910 Nitrogen metabolism [PATH:tbw00910]
D NCTC13354_00680 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D NCTC13354_01294 gdhA_2; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
C 00920 Sulfur metabolism [PATH:tbw00920]
D NCTC13354_01539 ssuE; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
D NCTC13354_00420 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NCTC13354_00419 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NCTC13354_01366 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NCTC13354_01266 dmsA; Dimethyl sulfoxide reductase DmsA precursor K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D NCTC13354_01265 dmsB; DMSO reductase iron-sulfur subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:tbw00061]
D NCTC13354_01641 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D NCTC13354_01644 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K00667 FAS2; fatty acid synthase subunit alpha, fungi type [EC:2.3.1.86]
D NCTC13354_01643 pksC; Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase pksC K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D NCTC13354_01342 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NCTC13354_00306 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_01348 fadK_2; Short-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_00402 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:tbw00071]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_00306 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_01348 fadK_2; Short-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_00402 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_01639 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:tbw00561]
D NCTC13354_01347 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NCTC13354_01383 dhaK; PTS-dependent dihydroxyacetone kinase, dihydroxyacetone-binding subunit dhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D NCTC13354_01382 dhaL; PTS-dependent dihydroxyacetone kinase, ADP-binding subunit dhaL K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D NCTC13354_01389 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NCTC13354_00003 yutF; Uncharacterized hydrolase yutF K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21]
D NCTC13354_00801 aas; Bifunctional protein aas K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NCTC13354_00107 dagK_1; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D NCTC13354_00903 dagK_2; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:tbw00564]
D NCTC13354_01394 glpA; Anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D NCTC13354_00765 glpD; Aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D NCTC13354_01393 glpB; Anaerobic glycerol-3-phosphate dehydrogenase subunit B K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D NCTC13354_01392 glpC; Anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D NCTC13354_00801 aas; Bifunctional protein aas K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D NCTC13354_00107 dagK_1; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D NCTC13354_00903 dagK_2; Diacylglycerol kinase K07029 dagK; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D NCTC13354_01273 ugpQ_1; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D NCTC13354_01468 ugpQ_2; Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D NCTC13354_00361 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D NCTC13354_00320 pgsA2; Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase 2 K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D NCTC13354_01613 cls; Cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:tbw00600]
D NCTC13354_01304 nedA; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D NCTC13354_01448 nanA; Sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D NCTC13354_00432 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:tbw00230]
D NCTC13354_01165 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NCTC13354_00724 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D NCTC13354_01178 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NCTC13354_00462 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NCTC13354_00155 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NCTC13354_01692 nagD_2; UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D NCTC13354_01813 deoD; Purine nucleoside phosphorylase deoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D NCTC13354_00284 yfiH; Laccase domain protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NCTC13354_01373 hpt; Hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D NCTC13354_00480 Uncharacterized oxidoreductase MSMEG_1603 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NCTC13354_00488 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NCTC13354_00392 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NCTC13354_01732 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D NCTC13354_00471 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NCTC13354_00042 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NCTC13354_00124 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D NCTC13354_01093 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NCTC13354_01106 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NCTC13354_01124 nrdD; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D NCTC13354_00268 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D NCTC13354_00154 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NCTC13354_00710 gppA; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D NCTC13354_01176 ppx; Exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D NCTC13354_00639 pH-sensitive adenylate cyclase Rv1264 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D NCTC13354_01005 Uncharacterized protein conserved in bacteria K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D NCTC13354_01290 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NCTC13354_00577 Adenine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D NCTC13354_00523 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00240 Pyrimidine metabolism [PATH:tbw00240]
D NCTC13354_00127 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NCTC13354_01281 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D NCTC13354_00363 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D NCTC13354_00392 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NCTC13354_00641 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D NCTC13354_01390 uridine/cytidine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D NCTC13354_01692 nagD_2; UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D NCTC13354_00897 upp; Uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D NCTC13354_01658 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D NCTC13354_01737 codA; Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D NCTC13354_01124 nrdD; Anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D NCTC13354_01244 dcd; Deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D NCTC13354_01093 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NCTC13354_01106 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D NCTC13354_00853 tmk; Thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D NCTC13354_01659 pdp; Pyrimidine-nucleoside phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D NCTC13354_01812 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D NCTC13354_01541 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:tbw00250]
D NCTC13354_00575 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NCTC13354_01137 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D NCTC13354_01874 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NCTC13354_01877 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NCTC13354_01290 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D NCTC13354_01178 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D NCTC13354_01144 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NCTC13354_00742 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NCTC13354_00680 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D NCTC13354_01294 gdhA_2; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D NCTC13354_00697 rocA1; 1-pyrroline-5-carboxylate dehydrogenase 1 K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NCTC13354_00127 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
C 00260 Glycine, serine and threonine metabolism [PATH:tbw00260]
D NCTC13354_00818 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NCTC13354_00817 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NCTC13354_01473 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NCTC13354_01475 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D NCTC13354_01474 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D NCTC13354_01649 glyA1; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NCTC13354_01347 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D NCTC13354_00841 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NCTC13354_00305 serA_1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NCTC13354_00791 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NCTC13354_00024 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D NCTC13354_01803 gcvP; Glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D NCTC13354_01802 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_01801 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D NCTC13354_00170 tdcG; L-serine dehydratase tdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D NCTC13354_01007 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NCTC13354_00063 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NCTC13354_00062 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:tbw00270]
D NCTC13354_00420 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D NCTC13354_00419 cysK1; O-acetylserine sulfhydrylase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D NCTC13354_01630 mccB; Cystathionine gamma-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NCTC13354_01740 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NCTC13354_01504 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NCTC13354_00121 metK_1; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NCTC13354_01586 metK_2; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NCTC13354_01088 mtnN; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D NCTC13354_00284 yfiH; Laccase domain protein yfiH K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D NCTC13354_01174 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NCTC13354_01089 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D NCTC13354_00818 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NCTC13354_00817 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NCTC13354_01473 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NCTC13354_01366 metX; Homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D NCTC13354_00750 mdeA; Methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D NCTC13354_00450 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NCTC13354_00575 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NCTC13354_00784 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NCTC13354_01638 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D NCTC13354_00170 tdcG; L-serine dehydratase tdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D NCTC13354_00305 serA_1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NCTC13354_00791 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:tbw00280]
D NCTC13354_00450 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_01642 accD5; Probable propionyl-CoA carboxylase beta chain 5 K01966 PCCB; propionyl-CoA carboxylase beta subunit [EC:6.4.1.3 2.1.3.15]
D NCTC13354_01641 accC; Biotin carboxylase K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tbw00290]
D NCTC13354_01007 ilvA; L-threonine dehydratase biosynthetic IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D NCTC13354_01754 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D NCTC13354_01755 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D NCTC13354_00451 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D NCTC13354_00455 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NCTC13354_00454 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NCTC13354_00453 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NCTC13354_01637 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NCTC13354_00450 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NCTC13354_01848 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:tbw00300]
D NCTC13354_01473 hom; Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D NCTC13354_00818 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NCTC13354_00817 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NCTC13354_01454 yagE; Probable 2-keto-3-deoxy-galactonate aldolase YagE K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NCTC13354_00325 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NCTC13354_00328 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D NCTC13354_01872 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NCTC13354_01472 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D NCTC13354_00986 ddh; Meso-diaminopimelate D-dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D NCTC13354_01050 lysN; 2-aminoadipate transaminase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D NCTC13354_00293 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NCTC13354_00292 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:tbw00310]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_01144 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NCTC13354_00742 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00220 Arginine biosynthesis [PATH:tbw00220]
D NCTC13354_01875 argF; Ornithine carbamoyltransferase chain F K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D NCTC13354_01874 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NCTC13354_01877 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NCTC13354_00127 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D NCTC13354_00680 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D NCTC13354_01294 gdhA_2; NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D NCTC13354_00575 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NCTC13354_01396 argA; Amino-acid acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D NCTC13354_01870 argJ; Glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D NCTC13354_01871 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D NCTC13354_01869 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D NCTC13354_01872 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:tbw00330]
D NCTC13354_01737 codA; Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D NCTC13354_01285 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NCTC13354_01022 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NCTC13354_00399 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D NCTC13354_00697 rocA1; 1-pyrroline-5-carboxylate dehydrogenase 1 K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NCTC13354_01780 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NCTC13354_01783 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D NCTC13354_00575 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:tbw00340]
D NCTC13354_00112 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D NCTC13354_00113 hisE; Phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D NCTC13354_00059 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D NCTC13354_01855 priA_2; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D NCTC13354_00058 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D NCTC13354_01853 hisB; Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D NCTC13354_01181 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01852 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01444 hisN; Histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15]
D NCTC13354_01851 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:tbw00350]
D NCTC13354_00575 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NCTC13354_01181 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01852 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01639 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D NCTC13354_01146 amnC; 2-aminomuconic 6-semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D NCTC13354_01145 hpcE; Homoprotocatechuate catabolism bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D NCTC13354_01151 xylJ; 2-hydroxypent-2,4-dienoate hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D NCTC13354_01152 hpcH; 4-hydroxy-2-oxo-heptane-1,7-dioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D NCTC13354_01144 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NCTC13354_00742 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:tbw00360]
D NCTC13354_00575 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NCTC13354_01181 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01852 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01285 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NCTC13354_01022 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NCTC13354_00016 bphA3; Biphenyl dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
C 00380 Tryptophan metabolism [PATH:tbw00380]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_01285 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NCTC13354_01022 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tbw00400]
D NCTC13354_00209 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NCTC13354_00132 aroB; 3-dehydroquinate synthase K13829 aroKB; shikimate kinase / 3-dehydroquinate synthase [EC:2.7.1.71 4.2.3.4]
D NCTC13354_01211 aroD; 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D NCTC13354_00131 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D NCTC13354_01446 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D NCTC13354_00133 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D NCTC13354_00060 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NCTC13354_00215 trpD; Anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D NCTC13354_01855 priA_2; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24]
D NCTC13354_00061 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D NCTC13354_00063 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D NCTC13354_00062 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D NCTC13354_00403 chorismate mutase K04092 tyrA1; chorismate mutase [EC:5.4.99.5]
D NCTC13354_00095 cmk; Cytidylate kinase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D NCTC13354_00902 pheA; Prephenate dehydratase K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D NCTC13354_00575 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NCTC13354_01181 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01852 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:tbw00410]
D NCTC13354_01386 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D NCTC13354_01385 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:tbw00430]
D NCTC13354_01137 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D NCTC13354_00473 pta; Phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D NCTC13354_00474 ackA; Acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:tbw00440]
D NCTC13354_01320 phnX; Phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D NCTC13354_01319 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
C 00450 Selenocompound metabolism [PATH:tbw00450]
D NCTC13354_01630 mccB; Cystathionine gamma-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NCTC13354_01740 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NCTC13354_01504 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D NCTC13354_00018 csd; Probable cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D NCTC13354_01049 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D NCTC13354_00736 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:tbw00460]
D NCTC13354_01021 bglB; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NCTC13354_01809 bglX; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NCTC13354_01649 glyA1; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:tbw00470]
D NCTC13354_00500 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NCTC13354_01759 ddl_2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NCTC13354_01051 ddl_1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NCTC13354_01729 racE; Glutamate racemase 1 K01776 murI; glutamate racemase [EC:5.1.1.3]
D NCTC13354_00290 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NCTC13354_01472 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:tbw00480]
D NCTC13354_00043 ybdK; Carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D NCTC13354_00223 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NCTC13354_00098 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NCTC13354_00659 icd; Isocitrate dehydrogenase [NADP] K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D NCTC13354_01160 yqjI; 6-phosphogluconate dehydrogenase, decarboxylating 2 K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D NCTC13354_00087 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:tbw00515]
D NCTC13354_00743 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:tbw00514]
D NCTC13354_00743 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:tbw00511]
D NCTC13354_01304 nedA; Sialidase precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
D NCTC13354_01448 nanA; Sialidase A precursor K01186 NEU1; sialidase-1 [EC:3.2.1.18]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:tbw00542]
D NCTC13354_01481 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tbw00541]
D NCTC13354_01738 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D NCTC13354_01876 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D NCTC13354_00605 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NCTC13354_00631 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NCTC13354_01860 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NCTC13354_00608 strL; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D NCTC13354_00793 manA; Mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D NCTC13354_01661 Probable phosphomannomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D NCTC13354_01653 manC1; Mannose-1-phosphate guanylyltransferase 1 K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D NCTC13354_00725 glmU; Bifunctional protein GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D NCTC13354_00628 dapH; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
C 00550 Peptidoglycan biosynthesis [PATH:tbw00550]
D NCTC13354_01757 murAA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NCTC13354_00578 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NCTC13354_00287 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NCTC13354_00290 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NCTC13354_00293 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NCTC13354_01759 ddl_2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NCTC13354_01051 ddl_1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NCTC13354_00292 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NCTC13354_00047 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NCTC13354_00291 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NCTC13354_00288 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NCTC13354_00294 ftsI; Peptidoglycan synthase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NCTC13354_01078 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D NCTC13354_01370 dacC; D-alanyl-D-alanine carboxypeptidase dacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NCTC13354_00579 femX; Lipid II:glycine glycyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
C 00552 Teichoic acid biosynthesis [PATH:tbw00552]
D NCTC13354_00047 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NCTC13354_01481 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:tbw00543]
D NCTC13354_01481 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NCTC13354_00701 icaA; Poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D NCTC13354_00420 cysE; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:tbw00730]
D NCTC13354_00184 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NCTC13354_01761 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D NCTC13354_01445 rsgA_1; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NCTC13354_01621 rsgA_2; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NCTC13354_00523 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:tbw00740]
D NCTC13354_00332 ribF; Riboflavin biosynthesis protein ribF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D NCTC13354_01539 ssuE; FMN reductase (NADPH) K00299 ssuE; FMN reductase [EC:1.5.1.38]
C 00750 Vitamin B6 metabolism [PATH:tbw00750]
D NCTC13354_01011 pdxK; Pyridoxine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D NCTC13354_00791 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D NCTC13354_01474 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:tbw00760]
D NCTC13354_01726 pncB; Nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D NCTC13354_01813 deoD; Purine nucleoside phosphorylase deoD-type K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D NCTC13354_01692 nagD_2; UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D NCTC13354_01784 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D NCTC13354_01513 nudC; NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D NCTC13354_01721 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D NCTC13354_00319 ygaD; competence damage-inducible protein A K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D NCTC13354_00737 nicotinamidase/pyrazinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D NCTC13354_00006 ppnK; Inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D NCTC13354_01828 pntA; NAD(P) transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D NCTC13354_01829 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D NCTC13354_01144 gabD; Succinate-semialdehyde dehydrogenase [NADP(+)] GabD K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D NCTC13354_00742 gabD2; Putative succinate-semialdehyde dehydrogenase [NADP(+)] 2 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:tbw00770]
D NCTC13354_00455 ilvB1; Acetolactate synthase large subunit IlvB1 K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D NCTC13354_00454 ilvH; Acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D NCTC13354_00453 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D NCTC13354_01637 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D NCTC13354_01385 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D NCTC13354_00502 coaA; Pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D NCTC13354_00122 coaBC; DNA/pantothenate metabolism flavoprotein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D NCTC13354_01765 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D NCTC13354_00072 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D NCTC13354_01645 acpS; Holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D NCTC13354_00450 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NCTC13354_01386 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:tbw00780]
D NCTC13354_01342 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NCTC13354_01640 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:tbw00785]
D NCTC13354_00653 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D NCTC13354_00654 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D NCTC13354_01713 lplA; Probable lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_00244 aceE; Pyruvate dehydrogenase E1 component K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D NCTC13354_00226 dlaT; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D NCTC13354_01464 kgd; 2-oxoglutarate decarboxylase K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
D NCTC13354_01803 gcvP; Glycine dehydrogenase [decarboxylating] K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D NCTC13354_01802 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NCTC13354_01801 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:tbw00790]
D NCTC13354_01375 folE; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D NCTC13354_01377 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridinepyrophosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D NCTC13354_01376 folP1; Dihydropteroate synthase 1 K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D NCTC13354_01540 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NCTC13354_00393 fgs; Folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D NCTC13354_00878 moaA; Probable molybdopterin cofactor synthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NCTC13354_00880 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D NCTC13354_00879 moaE1; Molybdopterin synthase catalytic subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NCTC13354_00881 moeA_2; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D NCTC13354_00779 moeA_1; Molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D NCTC13354_00877 molybdopterin-guanine dinucleotide biosynthesis protein MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:tbw00670]
D NCTC13354_01540 folA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D NCTC13354_01805 fhs; Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D NCTC13354_01650 folD; Bifunctional protein FolD K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D NCTC13354_01649 glyA1; Pyridoxal-phosphate-dependent serine hydroxymethyltransferase 1 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D NCTC13354_00462 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NCTC13354_00119 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NCTC13354_01802 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D NCTC13354_01541 thyA; Thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D NCTC13354_01647 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D NCTC13354_01505 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D NCTC13354_00780 ygfA; 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:tbw00860]
D NCTC13354_01741 gltX_2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NCTC13354_01276 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NCTC13354_01098 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D NCTC13354_01104 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D NCTC13354_01103 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NCTC13354_01101 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D NCTC13354_01102 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D NCTC13354_01099 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D NCTC13354_01100 hemY; Protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D NCTC13354_01097 hemH_1; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D NCTC13354_01227 hemH_2; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D NCTC13354_00410 uidA; Beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tbw00130]
D NCTC13354_01417 ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D NCTC13354_01416 dhbC; Isochorismate synthase dhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D NCTC13354_01414 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D NCTC13354_01413 ykfB; L-Ala-D/L-Glu epimerase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D NCTC13354_01410 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D NCTC13354_01412 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D NCTC13354_01409 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:tbw00900]
D NCTC13354_00184 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D NCTC13354_00358 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D NCTC13354_00836 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D NCTC13354_00732 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D NCTC13354_00835 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D NCTC13354_00356 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D NCTC13354_00685 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_00206 ispB_1; Octaprenyl-diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D NCTC13354_00689 Short-chain Z-isoprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D NCTC13354_00089 tkt; Transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:tbw00523]
D NCTC13354_00605 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NCTC13354_00631 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NCTC13354_01860 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NCTC13354_00608 strL; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D NCTC13354_01416 dhbC; Isochorismate synthase dhbC K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D NCTC13354_00631 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:tbw00946]
D NCTC13354_01021 bglB; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NCTC13354_01809 bglX; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:tbw00332]
D NCTC13354_01780 proB; Glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D NCTC13354_01783 proA; Gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:tbw00261]
D NCTC13354_00818 lysC; Aspartokinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D NCTC13354_00817 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D NCTC13354_01454 yagE; Probable 2-keto-3-deoxy-galactonate aldolase YagE K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NCTC13354_00325 dapA; Dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D NCTC13354_00328 dapB; Dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:tbw00521]
D NCTC13354_01455 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_01260 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_01165 pgm; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D NCTC13354_00602 suhB_1; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NCTC13354_01217 suhB_2; Inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D NCTC13354_00605 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NCTC13354_00631 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D NCTC13354_01860 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D NCTC13354_00608 strL; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D NCTC13354_01455 glkA_2; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D NCTC13354_01260 glkA_1; Glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:tbw00525]
D NCTC13354_00605 rmlA; Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D NCTC13354_00631 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:tbw00401]
D NCTC13354_00095 cmk; Cytidylate kinase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D NCTC13354_00575 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NCTC13354_01181 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01852 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D NCTC13354_00060 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D NCTC13354_01342 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
C 00999 Biosynthesis of various plant secondary metabolites [PATH:tbw00999]
D NCTC13354_00121 metK_1; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NCTC13354_01586 metK_2; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D NCTC13354_01021 bglB; Thermostable beta-glucosidase B K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D NCTC13354_01809 bglX; Periplasmic beta-glucosidase precursor K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:tbw00362]
D NCTC13354_00719 pcaI; 3-oxoadipate CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D NCTC13354_00720 pcaJ; 3-oxoadipate CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D NCTC13354_00345 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:tbw00627]
D NCTC13354_01285 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NCTC13354_01022 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NCTC13354_01150 pcpB; Pentachlorophenol 4-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:tbw00625]
D NCTC13354_01639 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
D NCTC13354_01150 pcpB; Pentachlorophenol 4-monooxygenase K03380 E1.14.13.7; phenol 2-monooxygenase (NADPH) [EC:1.14.13.7]
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation [PATH:tbw00643]
D NCTC13354_01285 nylA; 6-aminohexanoate-cyclic-dimer hydrolase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NCTC13354_01022 fmdA; Formamidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D NCTC13354_01343 ctfB; Butyrate--acetoacetate CoA-transferase subunit B K01026 pct; propionate CoA-transferase [EC:2.8.3.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:tbw00626]
D NCTC13354_01639 adh; Alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:tbw03020]
D NCTC13354_00566 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NCTC13354_00565 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NCTC13354_00515 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NCTC13354_00123 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:tbw03010]
D NCTC13354_00071 ypfD; 30S ribosomal protein S1 homolog K02945 RP-S1; small subunit ribosomal protein S1
D NCTC13354_00371 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NCTC13354_00538 rpsC; BS2 K02982 RP-S3; small subunit ribosomal protein S3
D NCTC13354_00140 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NCTC13354_00527 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NCTC13354_01039 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NCTC13354_00559 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NCTC13354_00530 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NCTC13354_00504 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NCTC13354_00545 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NCTC13354_00516 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NCTC13354_00560 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NCTC13354_00517 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NCTC13354_00531 rpsZ; BS21 K02954 RP-S14; small subunit ribosomal protein S14
D NCTC13354_00331 rpsO; BS18 K02956 RP-S15; small subunit ribosomal protein S15
D NCTC13354_00385 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NCTC13354_00535 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NCTC13354_01037 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D NCTC13354_00540 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NCTC13354_01830 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NCTC13354_00570 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NCTC13354_00541 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NCTC13354_00544 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NCTC13354_00543 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NCTC13354_00532 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NCTC13354_00529 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NCTC13354_00567 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NCTC13354_01036 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NCTC13354_00568 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NCTC13354_00571 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NCTC13354_00505 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NCTC13354_00534 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NCTC13354_00525 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NCTC13354_00537 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NCTC13354_00514 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NCTC13354_00528 rplR; BL22 K02881 RP-L18; large subunit ribosomal protein L18
D NCTC13354_00381 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NCTC13354_01859 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NCTC13354_01777 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NCTC13354_00539 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NCTC13354_00542 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NCTC13354_00533 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NCTC13354_00717 rplY; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D NCTC13354_01778 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NCTC13354_01762 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NCTC13354_00536 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NCTC13354_00526 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NCTC13354_01477 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NCTC13354_00417 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NCTC13354_00580 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D NCTC13354_01858 rpmI; RRP-L35 K02916 RP-L35; large subunit ribosomal protein L35
D NCTC13354_00518 rpmJ; Ribosomal protein II K02919 RP-L36; large subunit ribosomal protein L36
D NCTC13354_01618 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NCTC13354_01619 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NCTC13354_01620 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:tbw00970]
D NCTC13354_00776 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NCTC13354_01788 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NCTC13354_01068 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NCTC13354_00980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NCTC13354_00436 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NCTC13354_01469 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NCTC13354_00786 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NCTC13354_00254 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NCTC13354_01310 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NCTC13354_00176 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NCTC13354_01743 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NCTC13354_00726 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NCTC13354_01744 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NCTC13354_01745 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NCTC13354_01311 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NCTC13354_00177 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NCTC13354_00413 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NCTC13354_01243 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NCTC13354_00441 tRNA-His K14226 tRNA-His; tRNA His
D NCTC13354_01066 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NCTC13354_01736 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NCTC13354_00066 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NCTC13354_00040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NCTC13354_00708 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NCTC13354_01083 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D NCTC13354_01315 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NCTC13354_00443 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NCTC13354_00260 tRNA-Met K14230 tRNA-Met; tRNA Met
D NCTC13354_00581 tRNA-Met K14230 tRNA-Met; tRNA Met
D NCTC13354_01528 tRNA-Met K14230 tRNA-Met; tRNA Met
D NCTC13354_01309 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NCTC13354_00412 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NCTC13354_00874 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NCTC13354_00097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NCTC13354_00910 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NCTC13354_00909 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NCTC13354_00825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NCTC13354_00895 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NCTC13354_00850 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NCTC13354_00582 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NCTC13354_00808 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NCTC13354_00574 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NCTC13354_00583 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NCTC13354_00175 tRNA-Val K14237 tRNA-Val; tRNA Val
D NCTC13354_00242 tRNA-Val K14237 tRNA-Val; tRNA Val
D NCTC13354_00178 tRNA-Val K14237 tRNA-Val; tRNA Val
D NCTC13354_01741 gltX_2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NCTC13354_01276 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NCTC13354_00723 mdlY; Mandelamide hydrolase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NCTC13354_01615 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NCTC13354_01616 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D NCTC13354_01614 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D NCTC13354_00138 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NCTC13354_00145 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NCTC13354_00272 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D NCTC13354_00169 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NCTC13354_00904 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NCTC13354_00833 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NCTC13354_00736 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NCTC13354_00119 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D NCTC13354_00401 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NCTC13354_01819 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NCTC13354_00394 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NCTC13354_01706 lysX_2; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NCTC13354_01388 lysX_1; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NCTC13354_01471 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NCTC13354_00354 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NCTC13354_00150 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NCTC13354_01864 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NCTC13354_01865 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NCTC13354_01878 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NCTC13354_01511 trpS2; Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:tbw03060]
D NCTC13354_00524 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NCTC13354_00573 secE; Preprotein translocase subunit secE K03073 secE; preprotein translocase subunit SecE
D NCTC13354_00085 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NCTC13354_00157 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NCTC13354_00156 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NCTC13354_00158 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NCTC13354_01056 misCA; Stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NCTC13354_01434 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NCTC13354_00388 ffh; Fifty-four homolog K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NCTC13354_00389 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor
D NCTC13354_01195 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D NCTC13354_00264 twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D NCTC13354_00263 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D NCTC13354_00265 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC
D NCTC13354_00380 sipT; Signal peptidase I T K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NCTC13354_00280 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:tbw04122]
D NCTC13354_00879 moaE1; Molybdopterin synthase catalytic subunit 1 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D NCTC13354_00878 moaA; Probable molybdopterin cofactor synthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D NCTC13354_00889 MoaD family protein K03636 moaD; sulfur-carrier protein
D NCTC13354_00888 moeZ; Probable adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D NCTC13354_00880 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
C 03050 Proteasome
D NCTC13354_00052 mpa; Mycobacterial proteasome ATPase K13527 mpa; proteasome-associated ATPase
C 03018 RNA degradation [PATH:tbw03018]
D NCTC13354_01776 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D NCTC13354_00713 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NCTC13354_00330 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NCTC13354_00147 deaD; Cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NCTC13354_01476 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NCTC13354_00324 Putative ribonuclease J Rv2752c K12574 rnj; ribonuclease J [EC:3.1.-.-]
D NCTC13354_00460 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NCTC13354_01268 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NCTC13354_00804 groL1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NCTC13354_01323 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D NCTC13354_01045 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:tbw03030]
D NCTC13354_00481 polC_3; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00202 polC_1; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00213 uvrC_2; Excinuclease ABC subunit C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00278 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NCTC13354_00820 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NCTC13354_00852 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NCTC13354_01827 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NCTC13354_01060 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NCTC13354_01024 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NCTC13354_00267 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NCTC13354_00434 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01038 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01085 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NCTC13354_00379 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NCTC13354_01550 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:tbw03410]
D NCTC13354_00867 pdg; UV-endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NCTC13354_00807 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D NCTC13354_01398 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NCTC13354_01769 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NCTC13354_01277 nei; DNA glycosylase/AP lyase Nei K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D NCTC13354_00429 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NCTC13354_01283 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NCTC13354_01651 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NCTC13354_01550 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:tbw03420]
D NCTC13354_00715 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NCTC13354_00077 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D NCTC13354_00073 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D NCTC13354_00078 uvrC_1; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D NCTC13354_00469 pcrA_1; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NCTC13354_01678 pcrA_3; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NCTC13354_01514 pcrA_2; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NCTC13354_01550 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:tbw03430]
D NCTC13354_00469 pcrA_1; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NCTC13354_01678 pcrA_3; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NCTC13354_01514 pcrA_2; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NCTC13354_00686 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NCTC13354_00687 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NCTC13354_00434 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01038 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_00278 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NCTC13354_01060 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NCTC13354_00820 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NCTC13354_01827 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NCTC13354_00852 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NCTC13354_00481 polC_3; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00202 polC_1; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00213 uvrC_2; Excinuclease ABC subunit C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_01550 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NCTC13354_01608 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:tbw03440]
D NCTC13354_00434 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01038 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01061 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D NCTC13354_01849 recO; Recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D NCTC13354_00819 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D NCTC13354_00316 recA; Recombinase A K03553 recA; recombination protein RecA
D NCTC13354_00160 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NCTC13354_00159 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NCTC13354_00161 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NCTC13354_01763 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NCTC13354_01234 Divergent AAA domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NCTC13354_00278 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NCTC13354_01060 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NCTC13354_00820 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NCTC13354_01827 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NCTC13354_00852 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NCTC13354_00481 polC_3; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00202 polC_1; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00213 uvrC_2; Excinuclease ABC subunit C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00120 priA_1; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:tbw03250]
D NCTC13354_01072 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:tbw02010]
D NCTC13354_00883 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D NCTC13354_00884 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NCTC13354_00482 thiamine transporter substrate binding subunit K02012 afuA; iron(III) transport system substrate-binding protein
D NCTC13354_01318 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NCTC13354_01215 Maltose-binding periplasmic proteins/domains K02012 afuA; iron(III) transport system substrate-binding protein
D NCTC13354_01317 thiamine transporter membrane protein K02011 afuB; iron(III) transport system permease protein
D NCTC13354_01213 cysW; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein
D NCTC13354_01316 malK_2; Maltose/maltodextrin import ATP-binding protein MalK K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NCTC13354_01214 malK_1; Maltose/maltodextrin import ATP-binding protein MalK K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NCTC13354_00484 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NCTC13354_01253 thiB; Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D NCTC13354_01254 modB; Molybdenum transport system permease protein modB K02063 thiP; thiamine transport system permease protein
D NCTC13354_01255 fbpC2; Fe(3+) ions import ATP-binding protein FbpC 2 K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D NCTC13354_01501 malE; Maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D NCTC13354_01502 malF; Maltose transport system permease protein malF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D NCTC13354_01503 malG; Maltose transport system permease protein malG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D NCTC13354_00906 Maltose-binding periplasmic proteins/domains K10232 aglE; alpha-glucoside transport system substrate-binding protein
D NCTC13354_00907 ycjO; Inner membrane ABC transporter permease protein ycjO K10233 aglF; alpha-glucoside transport system permease protein
D NCTC13354_00908 ycjP_1; Inner membrane ABC transporter permease protein ycjP K10234 aglG; alpha-glucoside transport system permease protein
D NCTC13354_01654 tmpC; Purine nucleoside receptor A K07335 bmpA; basic membrane protein A and related proteins
D NCTC13354_01656 ytfT; Inner membrane ABC transporter permease protein ytfT K23535 nupB; general nucleoside transport system permease protein
D NCTC13354_01657 ABC-type uncharacterized transport system, permease component K23536 nupC; general nucleoside transport system permease protein
D NCTC13354_01655 rbsA_2; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D NCTC13354_01141 alsB; D-allose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D NCTC13354_01140 rbsC; Ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein
D NCTC13354_01139 rbsA_1; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D NCTC13354_01325 pstS3; Antigen Ag88 K02040 pstS; phosphate transport system substrate-binding protein
D NCTC13354_01326 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D NCTC13354_01327 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D NCTC13354_01328 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NCTC13354_01629 tcyA; L-cystine-binding protein tcyA precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D NCTC13354_01628 tcyB; L-cystine transport system permease protein tcyB K10009 tcyB; L-cystine transport system permease protein
D NCTC13354_01627 glnQ_2; Glutamine transport ATP-binding protein GlnQ K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D NCTC13354_01806 metQ; Methionine-binding lipoprotein metQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D NCTC13354_01807 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D NCTC13354_01808 metN_2; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D NCTC13354_00649 appA; Oligopeptide-binding protein AppA precursor K13889 gsiB; glutathione transport system substrate-binding protein
D NCTC13354_00652 oppB; Oligopeptide transport system permease protein oppB K13890 gsiC; glutathione transport system permease protein
D NCTC13354_00651 oppC; Oligopeptide transport system permease protein oppC K13891 gsiD; glutathione transport system permease protein
D NCTC13354_00650 gsiA_1; Glutathione import ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein
D NCTC13354_00671 adcA_2; Probable zinc transport system zinc-binding lipoprotein AdcA precursor K09815 znuA; zinc transport system substrate-binding protein
D NCTC13354_00273 adcA_1; Probable zinc transport system zinc-binding lipoprotein AdcA precursor K09815 znuA; zinc transport system substrate-binding protein
D NCTC13354_00672 zinc/cadmium-binding protein K09815 znuA; zinc transport system substrate-binding protein
D NCTC13354_00669 znuB_2; High-affinity zinc uptake system membrane protein znuB K09816 znuB; zinc transport system permease protein
D NCTC13354_00275 znuB_1; High-affinity zinc uptake system membrane protein znuB K09816 znuB; zinc transport system permease protein
D NCTC13354_00670 znuC_2; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NCTC13354_00274 znuC_1; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NCTC13354_01710 troA; Tromp-1 K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D NCTC13354_01708 mntB_3; Manganese transport system membrane protein mntB K11708 troC; manganese/zinc/iron transport system permease protein
D NCTC13354_01707 mntB_2; Manganese transport system membrane protein mntB K11709 troD; manganese/zinc/iron transport system permease protein
D NCTC13354_01709 cysA_3; Sulfate/thiosulfate import ATP-binding protein CysA K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D NCTC13354_01646 bioY2; Biotin ECF transporter S component BioY2 K03523 bioY; biotin transport system substrate-specific component
D NCTC13354_00615 kpsM; Polysialic acid transport protein kpsM K09690 wzm; homopolymeric O-antigen transport system permease protein
D NCTC13354_01689 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NCTC13354_01688 ftsE_2; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NCTC13354_01702 irtA; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D NCTC13354_01703 irtB; Iron import ATP-binding/permease protein IrtB K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D NCTC13354_00245 Putative multidrug export ATP-binding/permease protein SAV1866 K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D NCTC13354_00246 yheH; Probable multidrug resistance ABC transporter ATP-binding/permease protein YheH K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D NCTC13354_01772 Probable ABC transporter ATP-binding protein HI_0664 K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D NCTC13354_01773 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
C 02060 Phosphotransferase system (PTS)
D NCTC13354_01381 ptsI; Phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
C 03070 Bacterial secretion system [PATH:tbw03070]
D NCTC13354_00157 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NCTC13354_00156 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NCTC13354_00573 secE; Preprotein translocase subunit secE K03073 secE; preprotein translocase subunit SecE
D NCTC13354_00085 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NCTC13354_00524 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NCTC13354_00158 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NCTC13354_01056 misCA; Stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NCTC13354_01434 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NCTC13354_00389 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor
D NCTC13354_00388 ffh; Fifty-four homolog K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NCTC13354_00264 twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D NCTC13354_00263 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D NCTC13354_00265 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:tbw02020]
D NCTC13354_00839 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D NCTC13354_00838 regX3_2; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D NCTC13354_01325 pstS3; Antigen Ag88 K02040 pstS; phosphate transport system substrate-binding protein
D NCTC13354_01415 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D NCTC13354_00588 arlS_1; Signal transduction histidine-protein kinase ArlS K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D NCTC13354_00589 mtrA; DNA-binding response regulator mtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D NCTC13354_01059 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NCTC13354_01617 maeB; NADP-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D NCTC13354_01120 desK_1; Sensor histidine kinase desK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D NCTC13354_01119 vraR; Response regulator protein vraR K07693 desR; two-component system, NarL family, response regulator DesR
D NCTC13354_01771 devS; Redox sensor histidine kinase response regulator devS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D NCTC13354_01770 devR; Transcriptional regulatory protein devR (dosR) K07695 devR; two-component system, NarL family, response regulator DevR
D NCTC13354_00863 Type IV secretion system protein virB11 K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D NCTC13354_01680 Type IV secretion system protein virB11 K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D NCTC13354_00862 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D NCTC13354_01681 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D NCTC13354_01682 Flp pilus assembly protein TadB K12511 tadC; tight adherence protein C
D NCTC13354_00722 atoE; Short-chain fatty acids transporter K02106 atoE; short-chain fatty acids transporter
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_00868 crp; cAMP regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NCTC13354_01775 appC; Cytochrome bd-II oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D NCTC13354_01774 cydB; Cytochrome d ubiquinol oxidase subunit 2 K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D NCTC13354_01108 ptpA_1; Probable low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:tbw02024]
D NCTC13354_01089 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D NCTC13354_00060 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D NCTC13354_00632 rhamnosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D NCTC13354_00209 aroH; Phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D NCTC13354_00550 2-aminoethylphosphonate ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D NCTC13354_00548 2-aminoethylphosphonate transport system permease PhnU K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D NCTC13354_00549 potB; Spermidine/putrescine transport system permease protein PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D NCTC13354_00547 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D NCTC13354_00822 Alpha-agarase precursor K20276 bapA; large repetitive protein
D NCTC13354_00306 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_01348 fadK_2; Short-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_00402 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_00868 crp; cAMP regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NCTC13354_01450 gsiB; Glutathione-binding protein gsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NCTC13354_01451 gsiC; Glutathione transport system permease protein gsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D NCTC13354_01452 gsiA_2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D NCTC13354_01453 gsiA_3; Glutathione import ATP-binding protein GsiA K02032 ddpF; peptide/nickel transport system ATP-binding protein
D NCTC13354_01056 misCA; Stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NCTC13354_00573 secE; Preprotein translocase subunit secE K03073 secE; preprotein translocase subunit SecE
D NCTC13354_00085 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NCTC13354_00524 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NCTC13354_00158 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NCTC13354_01434 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NCTC13354_00389 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor
D NCTC13354_00388 ffh; Fifty-four homolog K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis
D NCTC13354_01141 alsB; D-allose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
C 02040 Flagellar assembly [PATH:tbw02040]
D NCTC13354_01629 tcyA; L-cystine-binding protein tcyA precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D NCTC13354_00203 hrdB; RNA polymerase principal sigma factor hrdB K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D NCTC13354_00713 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance
D NCTC13354_00294 ftsI; Peptidoglycan synthase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:tbw01502]
D NCTC13354_01759 ddl_2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NCTC13354_01051 ddl_1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NCTC13354_00500 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NCTC13354_00292 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D NCTC13354_00291 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NCTC13354_00288 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance
D NCTC13354_01072 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:tbw01000]
C 01001 Protein kinases [BR:tbw01001]
D NCTC13354_01077 pknB; Serine/threonine-protein kinase pknB K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D NCTC13354_00208 prkC; Serine/threonine-protein kinase PrkC K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D NCTC13354_00839 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D NCTC13354_00588 arlS_1; Signal transduction histidine-protein kinase ArlS K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D NCTC13354_00800 tcrY_2; Probable sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NCTC13354_00438 tcrY_1; Probable sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NCTC13354_00485 pdhS; Cell-division control histidine kinase pdhS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NCTC13354_01120 desK_1; Sensor histidine kinase desK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D NCTC13354_01771 devS; Redox sensor histidine kinase response regulator devS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D NCTC13354_01543 pdtaS; Probable sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:tbw01009]
D NCTC13354_00460 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NCTC13354_01080 pstP_1; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D NCTC13354_01847 pstP_2; PP2C-family Ser/Thr phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D NCTC13354_00024 serB; Phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:tbw01002]
D NCTC13354_00280 lspA; Lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D NCTC13354_00134 Uncharacterised protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NCTC13354_00471 guaA_2; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NCTC13354_00042 guaA_1; GMP synthase [glutamine-hydrolyzing] K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D NCTC13354_01367 iap; Probable endopeptidase p60 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D NCTC13354_00789 ripA; Peptidoglycan endopeptidase RipA precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D NCTC13354_00704 Sortase (surface protein transpeptidase) K07284 srtA; sortase A [EC:3.4.22.70]
D NCTC13354_01075 Sortase (surface protein transpeptidase) K07284 srtA; sortase A [EC:3.4.22.70]
D NCTC13354_01749 Sortase (surface protein transpeptidase) K07284 srtA; sortase A [EC:3.4.22.70]
D NCTC13354_00760 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D NCTC13354_00098 pepN; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D NCTC13354_01750 dcp; Peptidyl-dipeptidase dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D NCTC13354_00422 pepO; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D NCTC13354_00223 pepA; Cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D NCTC13354_00522 map_2; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D NCTC13354_00232 map_1; Methionine aminopeptidase 2 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D NCTC13354_01669 pepPI; Xaa-Pro aminopeptidase 1 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D NCTC13354_00661 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NCTC13354_01374 ftsH_2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NCTC13354_01415 htrA; Putative serine protease HtrA K08372 pepD; putative serine protease PepD [EC:3.4.21.-]
D NCTC13354_01263 Prolyl endopeptidase precursor K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D NCTC13354_01087 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D NCTC13354_01370 dacC; D-alanyl-D-alanine carboxypeptidase dacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NCTC13354_00405 clpP1_1; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NCTC13354_00406 clpP1_2; ATP-dependent Clp protease proteolytic subunit 1 K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NCTC13354_01576 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D NCTC13354_01517 ylbL; ATP-dependent protease Lon K07177 K07177; Lon-like protease
D NCTC13354_00309 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D NCTC13354_00380 sipT; Signal peptidase I T K03100 lepB; signal peptidase I [EC:3.4.21.89]
D NCTC13354_01751 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D NCTC13354_00761 yhbU; Uncharacterized protease yhbU precursor K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:tbw01003]
D NCTC13354_00103 arnC; Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D NCTC13354_00743 Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D NCTC13354_00166 pimA_1; GDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345]
D NCTC13354_01752 pimB; GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D NCTC13354_00026 glgA; Capsular glucan synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342]
D NCTC13354_01481 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D NCTC13354_00633 wbbL; dTDP-Rha:alpha-D-GlcNAc-pyrophosphate polyprenol, alpha-3-L-rhamnosyltransferase K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289]
D NCTC13354_00701 icaA; Poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D NCTC13354_00900 putative glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:tbw01005]
D NCTC13354_00632 rhamnosyltransferase K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D NCTC13354_01481 wecA; Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tbw01011]
D NCTC13354_01757 murAA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D NCTC13354_00578 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D NCTC13354_00287 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D NCTC13354_00290 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D NCTC13354_00293 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D NCTC13354_01759 ddl_2; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NCTC13354_01051 ddl_1; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D NCTC13354_00579 femX; Lipid II:glycine glycyltransferase K05363 murM; serine/alanine adding enzyme [EC:2.3.2.10]
D NCTC13354_00500 alr; Alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D NCTC13354_01729 racE; Glutamate racemase 1 K01776 murI; glutamate racemase [EC:5.1.1.3]
D NCTC13354_01751 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D NCTC13354_00291 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D NCTC13354_00288 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D NCTC13354_00047 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D NCTC13354_00396 murJ_2; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D NCTC13354_00011 murJ_1; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D NCTC13354_00294 ftsI; Peptidoglycan synthase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NCTC13354_01078 pbpA; Penicillin-binding protein A K05364 pbpA; penicillin-binding protein A
D NCTC13354_01370 dacC; D-alanyl-D-alanine carboxypeptidase dacC precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D NCTC13354_01367 iap; Probable endopeptidase p60 precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D NCTC13354_00789 ripA; Peptidoglycan endopeptidase RipA precursor K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D NCTC13354_00704 Sortase (surface protein transpeptidase) K07284 srtA; sortase A [EC:3.4.22.70]
D NCTC13354_01075 Sortase (surface protein transpeptidase) K07284 srtA; sortase A [EC:3.4.22.70]
D NCTC13354_01749 Sortase (surface protein transpeptidase) K07284 srtA; sortase A [EC:3.4.22.70]
D NCTC13354_00136 yceG; putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:tbw01004]
D NCTC13354_01644 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K00667 FAS2; fatty acid synthase subunit alpha, fungi type [EC:2.3.1.86]
D NCTC13354_01643 pksC; Polyketide biosynthesis malonyl CoA-acyl carrier protein transacylase pksC K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-]
D NCTC13354_01342 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D NCTC13354_00432 tesB; Acyl-CoA thioesterase 2 K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D NCTC13354_00306 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_01348 fadK_2; Short-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_00402 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_00655 fadK_1; Short-chain-fatty-acid--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D NCTC13354_00801 aas; Bifunctional protein aas K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:tbw01006]
D NCTC13354_00206 ispB_1; Octaprenyl-diphosphate synthase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D NCTC13354_00689 Short-chain Z-isoprenyl diphosphate synthase K12503 uppS; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68]
D NCTC13354_00313 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NCTC13354_01409 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
C 01007 Amino acid related enzymes [BR:tbw01007]
D NCTC13354_01741 gltX_2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NCTC13354_01276 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NCTC13354_01878 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NCTC13354_01511 trpS2; Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NCTC13354_00833 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NCTC13354_01471 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NCTC13354_00736 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NCTC13354_00394 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NCTC13354_00401 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NCTC13354_01819 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NCTC13354_01706 lysX_2; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NCTC13354_01388 lysX_1; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NCTC13354_00145 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NCTC13354_00150 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NCTC13354_00272 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D NCTC13354_00904 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NCTC13354_00354 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NCTC13354_00169 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NCTC13354_00138 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NCTC13354_01864 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NCTC13354_01865 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NCTC13354_00575 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D NCTC13354_01181 pat; Putative phenylalanine aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01852 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D NCTC13354_01740 patB; Cystathionine beta-lyase PatB K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D NCTC13354_01872 argD; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D NCTC13354_01104 hemL2; Glutamate-1-semialdehyde 2,1-aminomutase 2 K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D NCTC13354_00450 ilvE; Branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D NCTC13354_01319 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D NCTC13354_00791 serC; Putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:tbw00194]
D NCTC13354_01490 atpC; F-ATPase epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D NCTC13354_01489 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D NCTC13354_01488 atpG; F-ATPase gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D NCTC13354_01487 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D NCTC13354_01486 atpH; F-type ATPase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D NCTC13354_01485 atpF; F-type ATPase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D NCTC13354_01484 atpE; Lipid-binding protein K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D NCTC13354_01483 atpB; F-ATPase subunit 6 K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:tbw03000]
D NCTC13354_01174 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NCTC13354_00409 ccpA_1; Catabolite control protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NCTC13354_01341 ccpA_2; Glucose-resistance amylase regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D NCTC13354_01500 cytR; HTH-type transcriptional repressor CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D NCTC13354_00551 yvoA_1; HTH-type transcriptional repressor yvoA K03710 K03710; GntR family transcriptional regulator
D NCTC13354_01271 glnR; HTH-type transcriptional regulator glnR K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D NCTC13354_00276 zur; Zinc-specific metallo-regulatory protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D NCTC13354_01090 fur; Ferric uptake regulation protein K22297 furA; Fur family transcriptional regulator, stress-responsive regulator
D NCTC13354_00868 crp; cAMP regulatory protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D NCTC13354_00318 anaerobic benzoate catabolism transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator
D NCTC13354_00790 ideR_1; Iron-dependent repressor IdeR K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor
D NCTC13354_01711 ideR_2; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D NCTC13354_01640 birA; Bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D NCTC13354_01607 Predicted transcriptional regulator K07727 K07727; putative transcriptional regulator
D NCTC13354_00556 Helix-turn-helix K07729 K07729; putative transcriptional regulator
D NCTC13354_00697 rocA1; 1-pyrroline-5-carboxylate dehydrogenase 1 K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D NCTC13354_00489 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D NCTC13354_00871 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D NCTC13354_01544 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D NCTC13354_00601 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D NCTC13354_00958 Transcription factor WhiB K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator
D NCTC13354_01052 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NCTC13354_00837 CarD-like/TRCF domain K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D NCTC13354_01873 argR; Arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D NCTC13354_01839 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D NCTC13354_01395 deoR; Deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator
D NCTC13354_00842 paiB; Protease synthase and sporulation protein PAI 2 K07734 paiB; transcriptional regulator
D NCTC13354_00307 nrdR; Transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR
D NCTC13354_00298 mraZ; cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:tbw03021]
D NCTC13354_00515 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NCTC13354_00566 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NCTC13354_00565 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NCTC13354_00123 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NCTC13354_00203 hrdB; RNA polymerase principal sigma factor hrdB K03086 rpoD; RNA polymerase primary sigma factor
D NCTC13354_01459 rpoE; Sigma-24 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D NCTC13354_00351 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D NCTC13354_00128 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D NCTC13354_00572 nusG; Butanolide receptor K02601 nusG; transcription termination/antitermination protein NusG
D NCTC13354_00693 greA; Transcript cleavage factor greA K03624 greA; transcription elongation factor GreA
D NCTC13354_01476 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:tbw03019]
D NCTC13354_01776 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D NCTC13354_01768 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NCTC13354_00324 Putative ribonuclease J Rv2752c K12574 rnj; ribonuclease J [EC:3.1.-.-]
D NCTC13354_00437 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D NCTC13354_00147 deaD; Cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NCTC13354_00713 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NCTC13354_00330 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D NCTC13354_01476 rho; Transcription termination factor Rho K03628 rho; transcription termination factor Rho
D NCTC13354_00460 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D NCTC13354_01268 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NCTC13354_00804 groL1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NCTC13354_01323 ppk; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D NCTC13354_01045 cca; CCA-adding enzyme K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D NCTC13354_00079 yvcJ; glmZ(sRNA)-inactivating NTPase K06958 rapZ; RNase adapter protein RapZ
D NCTC13354_00106 ski2-like helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6]
D NCTC13354_01117 ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D NCTC13354_00989 ATP-dependent RNA helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:tbw03011]
D NCTC13354_00071 ypfD; 30S ribosomal protein S1 homolog K02945 RP-S1; small subunit ribosomal protein S1
D NCTC13354_00371 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D NCTC13354_00538 rpsC; BS2 K02982 RP-S3; small subunit ribosomal protein S3
D NCTC13354_00140 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D NCTC13354_00527 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D NCTC13354_01039 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D NCTC13354_00559 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D NCTC13354_00530 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D NCTC13354_00504 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D NCTC13354_00545 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D NCTC13354_00516 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D NCTC13354_00560 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D NCTC13354_00517 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D NCTC13354_00531 rpsZ; BS21 K02954 RP-S14; small subunit ribosomal protein S14
D NCTC13354_00331 rpsO; BS18 K02956 RP-S15; small subunit ribosomal protein S15
D NCTC13354_00385 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D NCTC13354_00535 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D NCTC13354_01037 rpsR1; 30S ribosomal protein S18 1 K02963 RP-S18; small subunit ribosomal protein S18
D NCTC13354_00540 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D NCTC13354_01830 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D NCTC13354_00570 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D NCTC13354_00541 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D NCTC13354_00544 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D NCTC13354_00543 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D NCTC13354_00532 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D NCTC13354_00529 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D NCTC13354_01036 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D NCTC13354_00568 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D NCTC13354_00571 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D NCTC13354_00567 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D NCTC13354_00505 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D NCTC13354_00534 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D NCTC13354_00525 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D NCTC13354_00537 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D NCTC13354_00514 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D NCTC13354_00528 rplR; BL22 K02881 RP-L18; large subunit ribosomal protein L18
D NCTC13354_00381 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D NCTC13354_01859 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D NCTC13354_01777 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D NCTC13354_00539 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D NCTC13354_00542 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D NCTC13354_00533 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D NCTC13354_01778 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D NCTC13354_01762 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D NCTC13354_00536 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D NCTC13354_00526 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D NCTC13354_01477 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D NCTC13354_00417 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D NCTC13354_00580 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D NCTC13354_01858 rpmI; RRP-L35 K02916 RP-L35; large subunit ribosomal protein L35
D NCTC13354_00518 rpmJ; Ribosomal protein II K02919 RP-L36; large subunit ribosomal protein L36
D NCTC13354_00717 rplY; General stress protein CTC K02897 RP-L25; large subunit ribosomal protein L25
D NCTC13354_01620 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NCTC13354_01618 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NCTC13354_01619 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:tbw03009]
D NCTC13354_01768 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NCTC13354_00437 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D NCTC13354_01845 era; GTPase Era K03595 era; GTPase
D NCTC13354_01779 obg; GTP-binding protein obg K03979 obgE; GTPase [EC:3.6.5.-]
D NCTC13354_00351 nusA; Transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D NCTC13354_00128 nusB; N utilization substance protein B homolog K03625 nusB; transcription antitermination protein NusB
D NCTC13354_00572 nusG; Butanolide receptor K02601 nusG; transcription termination/antitermination protein NusG
D NCTC13354_00733 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D NCTC13354_00118 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D NCTC13354_00754 rlmG; Ribosomal RNA large subunit methyltransferase G K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D NCTC13354_00312 rsmC; Ribosomal RNA small subunit methyltransferase C K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D NCTC13354_01764 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D NCTC13354_01841 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D NCTC13354_01054 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NCTC13354_00296 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D NCTC13354_00738 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D NCTC13354_00005 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase TlyA K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D NCTC13354_00832 rlmB; 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D NCTC13354_00360 rlmN; Ribosomal RNA large subunit methyltransferase N K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D NCTC13354_00988 rlmC; 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D NCTC13354_00472 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NCTC13354_00094 rluB; Ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D NCTC13354_00279 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D NCTC13354_00496 ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D NCTC13354_00383 rimM; Ribosome maturation factor rimM K02860 rimM; 16S rRNA processing protein RimM
D NCTC13354_01776 rng; Ribonuclease G K08300 rne; ribonuclease E [EC:3.1.26.12]
D NCTC13354_00137 yqgF; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D NCTC13354_00147 deaD; Cold-shock DEAD box protein A K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D NCTC13354_01445 rsgA_1; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NCTC13354_01621 rsgA_2; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D NCTC13354_00096 der; GTP-binding protein EngA K03977 engA; GTPase
D NCTC13354_00311 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D NCTC13354_01480 rimN; t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NCTC13354_00154 relA; Bifunctional (p)ppGpp synthase/hydrolase relA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D NCTC13354_00348 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D NCTC13354_00352 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D NCTC13354_00277 ybcJ; ribosome-associated protein K14761 rlbA; ribosome-associated protein
D NCTC13354_01786 ybeB; ribosome-associated protein K09710 ybeB; ribosome-associated protein
D NCTC13354_01843 Probable rRNA maturation factor K07042 ybeY; probable rRNA maturation factor
D NCTC13354_00682 engD; GTP-dependent nucleic acid-binding protein engD K06942 ychF; ribosome-binding ATPase
D NCTC13354_01767 Uncharacterized ACR, COG1399 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:tbw03016]
D NCTC13354_01741 gltX_2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NCTC13354_01276 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NCTC13354_00354 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D NCTC13354_00394 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D NCTC13354_01819 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NCTC13354_00736 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D NCTC13354_01471 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NCTC13354_01706 lysX_2; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NCTC13354_01388 lysX_1; Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D NCTC13354_00145 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NCTC13354_00138 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D NCTC13354_00272 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D NCTC13354_00169 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D NCTC13354_00904 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D NCTC13354_00833 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D NCTC13354_00401 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D NCTC13354_00150 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D NCTC13354_01864 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D NCTC13354_01865 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D NCTC13354_01878 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NCTC13354_01511 trpS2; Tryptophan--tRNA ligase 2 K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D NCTC13354_01336 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D NCTC13354_01818 HIT-like protein HI_0961 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NCTC13354_00051 trmI; tRNA (adenine(58)-N(1))-methyltransferase TrmI K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D NCTC13354_01835 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D NCTC13354_00509 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D NCTC13354_00347 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D NCTC13354_01480 rimN; t(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D NCTC13354_00313 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D NCTC13354_01058 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D NCTC13354_01731 rph; Ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D NCTC13354_00183 rnd; Ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D NCTC13354_00896 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D NCTC13354_00314 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D NCTC13354_00382 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D NCTC13354_00033 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D NCTC13354_01861 Putative TrmH family tRNA/rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D NCTC13354_00472 rluA; Ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D NCTC13354_01334 glycine cleavage system aminomethyltransferase T K06980 ygfZ; tRNA-modifying protein YgfZ
D NCTC13354_00999 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D NCTC13354_01372 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D NCTC13354_00497 yeaZ; UGMP family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D NCTC13354_00492 gcp; t(6)A37 threonylcarbamoyladenosine biosynthesis protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D NCTC13354_00499 ydiB; ADP-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D NCTC13354_00330 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:tbw03012]
D NCTC13354_00349 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NCTC13354_01857 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NCTC13354_00370 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D NCTC13354_00557 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D NCTC13354_00558 fusA; Elongation factor G K02355 fusA; elongation factor G
D NCTC13354_01478 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D NCTC13354_00362 frr; Ribosome-releasing factor K02838 frr; ribosome recycling factor
D NCTC13354_01479 prmC_2; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D NCTC13354_00716 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D NCTC13354_00519 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D NCTC13354_00129 efp; Elongation factor P K02356 efp; elongation factor P
D NCTC13354_01687 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:tbw03110]
D NCTC13354_01278 clpB; Chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D NCTC13354_01338 clpC; Probable ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D NCTC13354_00404 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D NCTC13354_01268 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NCTC13354_00804 groL1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NCTC13354_01270 cbpA; Curved DNA-binding protein K03686 dnaJ; molecular chaperone DnaJ
D NCTC13354_01840 dnaJ; Heat shock protein J K03686 dnaJ; molecular chaperone DnaJ
D NCTC13354_01269 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D NCTC13354_00364 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D NCTC13354_00490 groS; co-chaperonin GroES K04078 groES; chaperonin GroES
D NCTC13354_00661 ftsH_1; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NCTC13354_01374 ftsH_2; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D NCTC13354_01483 atpB; F-ATPase subunit 6 K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D NCTC13354_01262 twin-argninine leader-binding protein DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D NCTC13354_01072 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D NCTC13354_01782 trxC; Thioredoxin-2 K03671 TXN; thioredoxin
D NCTC13354_01498 ybbN; thioredoxin K05838 ybbN; putative thioredoxin
C 04131 Membrane trafficking [BR:tbw04131]
D NCTC13354_00392 ndkA; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D NCTC13354_01195 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D NCTC13354_00082 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NCTC13354_00841 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D NCTC13354_00065 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NCTC13354_00834 MFS transporter, metabolite:H+ symporter (MHS) family protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system [BR:tbw04121]
D NCTC13354_00054 pup; Bacterial ubiquitin-like modifier K13570 pup; prokaryotic ubiquitin-like protein Pup
C 03051 Proteasome [BR:tbw03051]
D NCTC13354_00052 mpa; Mycobacterial proteasome ATPase K13527 mpa; proteasome-associated ATPase
D NCTC13354_00055 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19]
D NCTC13354_00110 Uncharacterised protein K13572 pafB; proteasome accessory factor B
D NCTC13354_00109 Uncharacterised protein K13573 pafC; proteasome accessory factor C
D NCTC13354_00053 dop; Pup deamidase/depupylase K20814 dop; Pup amidohydrolase [EC:3.5.1.119]
C 03032 DNA replication proteins [BR:tbw03032]
D NCTC13354_01085 rnhA; Ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D NCTC13354_01174 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NCTC13354_01723 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D NCTC13354_01059 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NCTC13354_01024 dnaB; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D NCTC13354_00267 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D NCTC13354_00434 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01038 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_00278 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NCTC13354_01060 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NCTC13354_01827 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NCTC13354_00852 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NCTC13354_00481 polC_3; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00202 polC_1; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00213 uvrC_2; Excinuclease ABC subunit C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00820 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NCTC13354_00379 rnhB; Ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D NCTC13354_01550 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NCTC13354_01608 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NCTC13354_01064 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NCTC13354_00197 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NCTC13354_01063 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NCTC13354_00200 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NCTC13354_00854 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:tbw03036]
D NCTC13354_01174 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NCTC13354_01768 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D NCTC13354_01723 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D NCTC13354_01059 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D NCTC13354_00391 smc; Chromosome partition protein Smc K03529 smc; chromosome segregation protein
D NCTC13354_00092 scpA; Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D NCTC13354_00093 scpB; Segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D NCTC13354_01688 ftsE_2; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NCTC13354_00294 ftsI; Peptidoglycan synthase FtsI precursor K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D NCTC13354_00322 spoIIIE; Stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D NCTC13354_00286 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D NCTC13354_00289 ftsW_1; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D NCTC13354_01689 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NCTC13354_00285 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NCTC13354_00283 sepF; Cell division protein SepF K09772 sepF; cell division inhibitor SepF
D NCTC13354_00091 soj_1; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D NCTC13354_01053 soj_2; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D NCTC13354_01052 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D NCTC13354_01054 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D NCTC13354_00374 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D NCTC13354_00090 xerD; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D NCTC13354_01666 ylxH; antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NCTC13354_00081 whiA; Putative sporulation transcription regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:tbw03400]
D NCTC13354_00807 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D NCTC13354_01398 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D NCTC13354_00867 pdg; UV-endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D NCTC13354_01286 nudG; CTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NCTC13354_00642 Predicted NTP pyrophosphohydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D NCTC13354_00429 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D NCTC13354_01769 mutM; Formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D NCTC13354_01277 nei; DNA glycosylase/AP lyase Nei K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18]
D NCTC13354_01283 xthA; Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NCTC13354_01651 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D NCTC13354_01550 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D NCTC13354_00077 uvrA; Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D NCTC13354_00073 uvrB; Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D NCTC13354_00078 uvrC_1; Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D NCTC13354_00469 pcrA_1; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NCTC13354_01678 pcrA_3; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NCTC13354_01514 pcrA_2; ATP-dependent DNA helicase pcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D NCTC13354_00566 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D NCTC13354_00565 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D NCTC13354_00515 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D NCTC13354_00123 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D NCTC13354_00715 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D NCTC13354_00686 xseA; Exodeoxyribonuclease 7 large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D NCTC13354_00687 xseB; Exodeoxyribonuclease 7 small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D NCTC13354_00278 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D NCTC13354_01060 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D NCTC13354_01827 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D NCTC13354_00852 dnaX_2; DNA polymerase III subunit tau K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D NCTC13354_00481 polC_3; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00202 polC_1; DNA polymerase III polC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00213 uvrC_2; Excinuclease ABC subunit C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D NCTC13354_00820 dnaX_1; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D NCTC13354_00434 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01038 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01608 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NCTC13354_00316 recA; Recombinase A K03553 recA; recombination protein RecA
D NCTC13354_00160 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D NCTC13354_00159 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D NCTC13354_00161 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D NCTC13354_00120 priA_1; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D NCTC13354_01442 sbcC; Nuclease sbcCD subunit C K03546 sbcC; DNA repair protein SbcC/Rad50
D NCTC13354_01443 sbcD; Nuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11
D NCTC13354_01401 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D NCTC13354_01061 recF; DNA replication and repair protein recF K03629 recF; DNA replication and repair protein RecF
D NCTC13354_01763 recG; ATP-dependent DNA helicase recG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NCTC13354_01234 Divergent AAA domain K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D NCTC13354_01849 recO; Recombination protein O K03584 recO; DNA repair protein RecO (recombination protein O)
D NCTC13354_00819 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D NCTC13354_00007 recN; Recombination protein N K03631 recN; DNA repair protein RecN (Recombination protein N)
D NCTC13354_01183 ygbT; CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI K15342 cas1; CRISP-associated protein Cas1
D NCTC13354_01064 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NCTC13354_00197 gyrA_1; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D NCTC13354_01063 gyrB_2; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NCTC13354_00200 gyrB_1; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D NCTC13354_00854 topA; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D NCTC13354_01723 hup; DNA-binding protein HB1 K03530 hupB; DNA-binding protein HU-beta
D NCTC13354_00300 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D NCTC13354_00309 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D NCTC13354_00036 DNA polymerase IV K14161 imuB; protein ImuB
D NCTC13354_00037 dnaE_1; DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D NCTC13354_00315 recX; Regulatory protein recX K03565 recX; regulatory protein
D NCTC13354_00310 dinG; Probable ATP-dependent helicase dinG homolog K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D NCTC13354_01324 bifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69]
D NCTC13354_00012 nudF; ADP-ribose pyrophosphatase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58]
D NCTC13354_01093 nrdE2; Ribonucleoside-diphosphate reductase subunit alpha 2 K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D NCTC13354_01106 nrdF2; Ribonucleoside-diphosphate reductase subunit beta nrdF2 K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:tbw03029]
D NCTC13354_00349 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D NCTC13354_01857 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D NCTC13354_00370 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D NCTC13354_00557 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D NCTC13354_00558 fusA; Elongation factor G K02355 fusA; elongation factor G
D NCTC13354_01845 era; GTPase Era K03595 era; GTPase
D NCTC13354_01878 tyrS; Tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D NCTC13354_01819 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D NCTC13354_00145 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D NCTC13354_00272 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D NCTC13354_01471 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D NCTC13354_00723 mdlY; Mandelamide hydrolase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NCTC13354_01615 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D NCTC13354_01616 gatB; Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D NCTC13354_01614 gatC; Glutamyl-tRNA(Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D NCTC13354_00434 ssb_1; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01038 ssb_2; Helix-destabilizing protein K03111 ssb; single-strand DNA-binding protein
D NCTC13354_01268 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NCTC13354_01269 grpE; HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE
D NCTC13354_00804 groL1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NCTC13354_00490 groS; co-chaperonin GroES K04078 groES; chaperonin GroES
D NCTC13354_01270 cbpA; Curved DNA-binding protein K03686 dnaJ; molecular chaperone DnaJ
D NCTC13354_01840 dnaJ; Heat shock protein J K03686 dnaJ; molecular chaperone DnaJ
D NCTC13354_01666 ylxH; antiporter inner membrane protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D NCTC13354_01056 misCA; Stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:tbw02000]
D NCTC13354_01702 irtA; Iron import ATP-binding/permease protein IrtA K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D NCTC13354_01703 irtB; Iron import ATP-binding/permease protein IrtB K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D NCTC13354_00623 msbA; Lipid A export ATP-binding/permease protein MsbA K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D NCTC13354_00245 Putative multidrug export ATP-binding/permease protein SAV1866 K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D NCTC13354_00246 yheH; Probable multidrug resistance ABC transporter ATP-binding/permease protein YheH K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D NCTC13354_01027 Probable ABC transporter ATP-binding protein HI_0664 K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D NCTC13354_01772 Probable ABC transporter ATP-binding protein HI_0664 K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D NCTC13354_01773 cydD; ATP-binding/permease protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D NCTC13354_00731 Uncharacterized ABC transporter ATP-binding protein HI_1252 K15738 uup; ABC transport system ATP-binding/permease protein
D NCTC13354_00883 modA; Molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D NCTC13354_00884 cysA_2; Sulfate/thiosulfate import ATP-binding protein CysA K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D NCTC13354_00482 thiamine transporter substrate binding subunit K02012 afuA; iron(III) transport system substrate-binding protein
D NCTC13354_01318 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D NCTC13354_01215 Maltose-binding periplasmic proteins/domains K02012 afuA; iron(III) transport system substrate-binding protein
D NCTC13354_01317 thiamine transporter membrane protein K02011 afuB; iron(III) transport system permease protein
D NCTC13354_01213 cysW; Sulfate transport system permease protein CysW K02011 afuB; iron(III) transport system permease protein
D NCTC13354_01316 malK_2; Maltose/maltodextrin import ATP-binding protein MalK K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NCTC13354_01214 malK_1; Maltose/maltodextrin import ATP-binding protein MalK K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NCTC13354_00484 fbpC; Fe(3+) ions import ATP-binding protein FbpC K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D NCTC13354_01253 thiB; Thiamine-binding periplasmic protein precursor K02064 thiB; thiamine transport system substrate-binding protein
D NCTC13354_01254 modB; Molybdenum transport system permease protein modB K02063 thiP; thiamine transport system permease protein
D NCTC13354_01255 fbpC2; Fe(3+) ions import ATP-binding protein FbpC 2 K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D NCTC13354_00550 2-aminoethylphosphonate ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D NCTC13354_00548 2-aminoethylphosphonate transport system permease PhnU K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D NCTC13354_00549 potB; Spermidine/putrescine transport system permease protein PotB K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D NCTC13354_00547 cysA_1; Sulfate/thiosulfate import ATP-binding protein CysA K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D NCTC13354_00114 ABC-type taurine transport system, periplasmic component K24985 ribY; putative riboflavin transport system substrate-binding protein
D NCTC13354_00115 proW; Glycine betaine/L-proline transport system permease protein proW K24986 ribX; putative riboflavin transport system permease protein
D NCTC13354_01501 malE; Maltodextrin-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D NCTC13354_01502 malF; Maltose transport system permease protein malF K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D NCTC13354_01503 malG; Maltose transport system permease protein malG K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D NCTC13354_00906 Maltose-binding periplasmic proteins/domains K10232 aglE; alpha-glucoside transport system substrate-binding protein
D NCTC13354_00907 ycjO; Inner membrane ABC transporter permease protein ycjO K10233 aglF; alpha-glucoside transport system permease protein
D NCTC13354_00908 ycjP_1; Inner membrane ABC transporter permease protein ycjP K10234 aglG; alpha-glucoside transport system permease protein
D NCTC13354_01141 alsB; D-allose-binding periplasmic protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D NCTC13354_01140 rbsC; Ribose transport system permease protein rbsC K10440 rbsC; ribose transport system permease protein
D NCTC13354_01139 rbsA_1; Ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D NCTC13354_01654 tmpC; Purine nucleoside receptor A K07335 bmpA; basic membrane protein A and related proteins
D NCTC13354_01656 ytfT; Inner membrane ABC transporter permease protein ytfT K23535 nupB; general nucleoside transport system permease protein
D NCTC13354_01657 ABC-type uncharacterized transport system, permease component K23536 nupC; general nucleoside transport system permease protein
D NCTC13354_01655 rbsA_2; Ribose import ATP-binding protein RbsA K23537 nupA; general nucleoside transport system ATP-binding protein
D NCTC13354_01110 mdxE; Maltodextrin-binding protein mdxE precursor K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D NCTC13354_01112 ugpA; sn-glycerol-3-phosphate transport system permease protein ugpA K02025 ABC.MS.P; multiple sugar transport system permease protein
D NCTC13354_01111 ycjP_2; Inner membrane ABC transporter permease protein ycjP K02026 ABC.MS.P1; multiple sugar transport system permease protein
D NCTC13354_01325 pstS3; Antigen Ag88 K02040 pstS; phosphate transport system substrate-binding protein
D NCTC13354_01326 pstC; Phosphate transport system permease protein pstC K02037 pstC; phosphate transport system permease protein
D NCTC13354_01327 pstA; Phosphate transport system permease protein pstA K02038 pstA; phosphate transport system permease protein
D NCTC13354_01328 pstB3; Phosphate import ATP-binding protein PstB 3 K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D NCTC13354_01629 tcyA; L-cystine-binding protein tcyA precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D NCTC13354_01628 tcyB; L-cystine transport system permease protein tcyB K10009 tcyB; L-cystine transport system permease protein
D NCTC13354_01627 glnQ_2; Glutamine transport ATP-binding protein GlnQ K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D NCTC13354_01806 metQ; Methionine-binding lipoprotein metQ precursor K02073 metQ; D-methionine transport system substrate-binding protein
D NCTC13354_01807 metP; Methionine import system permease protein MetP K02072 metI; D-methionine transport system permease protein
D NCTC13354_01808 metN_2; Methionine import ATP-binding protein MetN K02071 metN; D-methionine transport system ATP-binding protein
D NCTC13354_00673 ABC-type uncharacterized transport system, periplasmic component K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D NCTC13354_00674 autoinducer 2 ABC transporter permease LsrC K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D NCTC13354_00675 metN_1; Methionine import ATP-binding protein MetN K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D NCTC13354_00511 glnH; Glutamine-binding periplasmic protein precursor K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D NCTC13354_00512 yecS; Inner membrane amino-acid ABC transporter permease protein yecS K02029 ABC.PA.P; polar amino acid transport system permease protein
D NCTC13354_00649 appA; Oligopeptide-binding protein AppA precursor K13889 gsiB; glutathione transport system substrate-binding protein
D NCTC13354_00652 oppB; Oligopeptide transport system permease protein oppB K13890 gsiC; glutathione transport system permease protein
D NCTC13354_00651 oppC; Oligopeptide transport system permease protein oppC K13891 gsiD; glutathione transport system permease protein
D NCTC13354_00650 gsiA_1; Glutathione import ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein
D NCTC13354_01450 gsiB; Glutathione-binding protein gsiB precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D NCTC13354_01451 gsiC; Glutathione transport system permease protein gsiC K02033 ABC.PE.P; peptide/nickel transport system permease protein
D NCTC13354_01452 gsiA_2; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D NCTC13354_01453 gsiA_3; Glutathione import ATP-binding protein GsiA K02032 ddpF; peptide/nickel transport system ATP-binding protein
D NCTC13354_01035 hmuT; Hemin-binding periplasmic protein hmuT precursor K25132 hmuT; heme transport system substrate-binding protein
D NCTC13354_01034 Probable ABC transporter permease protein HI_1471 K25133 hmuU; heme transport system permease protein
D NCTC13354_01033 hmuV; Hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D NCTC13354_01161 yclQ; Uncharacterized ABC transporter solute-binding protein yclQ precursor K25282 yclQ; iron-siderophore transport system substrate-binding protein
D NCTC13354_01163 feuC; Iron-uptake system permease protein FeuC K25283 yclO; iron-siderophore transport system permease protein
D NCTC13354_01162 feuB; Iron-uptake system permease protein FeuB K25284 yclN; iron-siderophore transport system permease protein
D NCTC13354_01164 fhuC; Iron(3+)-hydroxamate import ATP-binding protein FhuC K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D NCTC13354_00027 Uncharacterized ABC transporter ATP-binding protein HI_1470 K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D NCTC13354_00671 adcA_2; Probable zinc transport system zinc-binding lipoprotein AdcA precursor K09815 znuA; zinc transport system substrate-binding protein
D NCTC13354_00273 adcA_1; Probable zinc transport system zinc-binding lipoprotein AdcA precursor K09815 znuA; zinc transport system substrate-binding protein
D NCTC13354_00672 zinc/cadmium-binding protein K09815 znuA; zinc transport system substrate-binding protein
D NCTC13354_00669 znuB_2; High-affinity zinc uptake system membrane protein znuB K09816 znuB; zinc transport system permease protein
D NCTC13354_00275 znuB_1; High-affinity zinc uptake system membrane protein znuB K09816 znuB; zinc transport system permease protein
D NCTC13354_00670 znuC_2; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NCTC13354_00274 znuC_1; Zinc import ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D NCTC13354_01710 troA; Tromp-1 K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D NCTC13354_01708 mntB_3; Manganese transport system membrane protein mntB K11708 troC; manganese/zinc/iron transport system permease protein
D NCTC13354_01707 mntB_2; Manganese transport system membrane protein mntB K11709 troD; manganese/zinc/iron transport system permease protein
D NCTC13354_01709 cysA_3; Sulfate/thiosulfate import ATP-binding protein CysA K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D NCTC13354_01646 bioY2; Biotin ECF transporter S component BioY2 K03523 bioY; biotin transport system substrate-specific component
D NCTC13354_00615 kpsM; Polysialic acid transport protein kpsM K09690 wzm; homopolymeric O-antigen transport system permease protein
D NCTC13354_01689 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D NCTC13354_01688 ftsE_2; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D NCTC13354_00700 Uncharacterized protein conserved in bacteria K01992 ABC-2.P; ABC-2 type transport system permease protein
D NCTC13354_00554 Uncharacterised protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D NCTC13354_01121 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D NCTC13354_00729 yhaP; ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D NCTC13354_01170 daunorubicin resistance ABC transporter membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D NCTC13354_01796 drrB; Daunorubicin/doxorubicin resistance ABC transporter permease protein drrB K01992 ABC-2.P; ABC-2 type transport system permease protein
D NCTC13354_01622 ABC-type uncharacterized transport system, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D NCTC13354_01623 Uncharacterised protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D NCTC13354_00699 artM_1; Arginine transport ATP-binding protein ArtM K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NCTC13354_00553 Fluoroquinolones export ATP-binding protein Rv2688c/MT2762 K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NCTC13354_01122 ybhF_2; Uncharacterized ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NCTC13354_00728 ybhF_1; Uncharacterized ABC transporter ATP-binding protein YbhF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NCTC13354_01171 artM_2; Arginine transport ATP-binding protein ArtM K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NCTC13354_01795 drrA_2; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NCTC13354_01624 drrA_1; Daunorubicin/doxorubicin resistance ATP-binding protein DrrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D NCTC13354_00463 macB_1; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D NCTC13354_00744 acidobacterial duplicated orphan permease K02004 ABC.CD.P; putative ABC transport system permease protein
D NCTC13354_01545 Uncharacterised protein K02004 ABC.CD.P; putative ABC transport system permease protein
D NCTC13354_01221 macB_4; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D NCTC13354_00464 macB_2; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NCTC13354_00893 lolD_2; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NCTC13354_00745 lolD_1; Lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NCTC13354_01546 macB_5; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NCTC13354_01220 macB_3; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NCTC13354_01241 ftsE_1; Cell division ATP-binding protein FtsE K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D NCTC13354_00017 yurY; Vegetative protein 296 K09013 sufC; Fe-S cluster assembly ATP-binding protein
D NCTC13354_00076 Sodium Bile acid symporter family K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D NCTC13354_00885 sdcS_1; Na(+)/dicarboxylate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D NCTC13354_00979 sdcS_2; Na(+)/dicarboxylate symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D NCTC13354_01026 mdtK; Multidrug-efflux transporter K26937 dinF; MATE family, multidrug efflux pump
D NCTC13354_00487 glpT; G-3-P permease K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D NCTC13354_00753 norB_1; Quinolone resistance protein norB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D NCTC13354_00759 norB_2; Quinolone resistance protein norB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D NCTC13354_00834 MFS transporter, metabolite:H+ symporter (MHS) family protein K06902 UMF1; MFS transporter, UMF1 family
D NCTC13354_01381 ptsI; Phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D NCTC13354_01209 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain K07114 yfbK; Ca-activated chloride channel homolog
D NCTC13354_01208 Uncharacterised protein K07114 yfbK; Ca-activated chloride channel homolog
D NCTC13354_00664 focA; Formate channel 1 K06212 focA; formate transporter
D NCTC13354_00668 mscL; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D NCTC13354_00239 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D NCTC13354_00240 crcB; camphor resistance protein CrcB K06199 crcB; fluoride exporter
D NCTC13354_01844 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NCTC13354_01466 ytfL_2; Putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NCTC13354_01465 ytfL_1; magnesium/cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NCTC13354_01365 lysP; Lysine-specific permease K11733 lysP; lysine-specific permease
D NCTC13354_01314 rhtA; Inner membrane transporter rhtA K11939 rhtA; inner membrane transporter RhtA
D NCTC13354_00425 glcA; Glycolate permease glcA K03303 lutP; lactate permease
D NCTC13354_01533 chaA; Calcium/proton antiporter K07300 chaA; Ca2+:H+ antiporter
D NCTC13354_00696 putP; Proline permease K11928 putP; sodium/proline symporter
D NCTC13354_00709 nhaA; Sodium/proton antiporter nhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D NCTC13354_01403 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D NCTC13354_00188 trkA_1; Trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein
D NCTC13354_00189 trkA_2; Trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein
D NCTC13354_01402 ktrA; Ktr system potassium uptake protein A K03499 trkA; trk/ktr system potassium uptake protein
D NCTC13354_00792 purP; Probable adenine permease PurP K06901 pbuG; adenine/guanine/hypoxanthine permease
D NCTC13354_01527 ychM; Putative sulfate transporter ychM K03321 TC.SULP; sulfate permease, SulP family
D NCTC13354_01195 arsA; Arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D NCTC13354_01245 mrpA; Multiple resistance and pH homeostasis protein A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A
D NCTC13354_01246 mnhC1; Mrp complex subunit C1 K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D NCTC13354_01247 mrpD; Multiple resistance and pH homeostasis protein D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D NCTC13354_01248 putative monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D NCTC13354_01249 putative monovalent cation/H+ antiporter subunit F K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D NCTC13354_01250 mrpG; Multiple resistance and pH homeostasis protein G K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D NCTC13354_00396 murJ_2; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D NCTC13354_00011 murJ_1; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D NCTC13354_01810 ygaZ; Inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump
D NCTC13354_01811 Branched-chain amino acid transport protein (AzlD) K26606 azlD; branched chain amino acid efflux pump
D NCTC13354_00757 yhhT_1; pheromone autoinducer 2 transporter K20469 K20469; putative heme transporter
D NCTC13354_01814 tqsA; Transport of quorum-sensing signal protein K20469 K20469; putative heme transporter
D NCTC13354_01000 conserved hypothetical integral membrane protein K09125 yhhQ; queuosine precursor transporter
D NCTC13354_00289 ftsW_1; Cell division protein FtsW K03588 ftsW; cell division protein FtsW
D NCTC13354_01266 dmsA; Dimethyl sulfoxide reductase DmsA precursor K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D NCTC13354_01265 dmsB; DMSO reductase iron-sulfur subunit K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
C 02044 Secretion system [BR:tbw02044]
D NCTC13354_00134 Uncharacterised protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NCTC13354_00863 Type IV secretion system protein virB11 K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D NCTC13354_01680 Type IV secretion system protein virB11 K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D NCTC13354_00862 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D NCTC13354_01681 Flp pilus assembly protein TadB K12510 tadB; tight adherence protein B
D NCTC13354_01682 Flp pilus assembly protein TadB K12511 tadC; tight adherence protein C
D NCTC13354_00282 YGGT family K02221 yggT; YggT family protein
D NCTC13354_01821 comEA; ComE operon protein 1 K02237 comEA; competence protein ComEA
D NCTC13354_01822 ComEC family competence protein K02238 comEC; competence protein ComEC
D NCTC13354_01434 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D NCTC13354_00157 secD; preprotein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D NCTC13354_00573 secE; Preprotein translocase subunit secE K03073 secE; preprotein translocase subunit SecE
D NCTC13354_00156 secF; preprotein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D NCTC13354_00085 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D NCTC13354_00524 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D NCTC13354_00388 ffh; Fifty-four homolog K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D NCTC13354_00389 ftsY; Cell division protein FtsY homolog K03110 ftsY; fused signal recognition particle receptor
D NCTC13354_00158 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D NCTC13354_01056 misCA; Stage III sporulation protein J K03217 yidC; YidC/Oxa1 family membrane protein insertase
D NCTC13354_00264 twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D NCTC13354_00263 sec-independent translocase K03117 tatB; sec-independent protein translocase protein TatB
D NCTC13354_00265 tatC2; Sec-independent protein translocase protein TatCy K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:tbw02042]
D NCTC13354_01844 corC; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NCTC13354_01466 ytfL_2; Putative Mg2+ and Co2+ transporter CorB K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NCTC13354_01465 ytfL_1; magnesium/cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D NCTC13354_00690 yqfA; hemolysin K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:tbw02022]
D NCTC13354_00839 senX3; Signal-transduction histidine kinase senX3 K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3]
D NCTC13354_00838 regX3_2; Sensory transduction protein regX3 K07776 regX3; two-component system, OmpR family, response regulator RegX3
D NCTC13354_00588 arlS_1; Signal transduction histidine-protein kinase ArlS K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3]
D NCTC13354_00589 mtrA; DNA-binding response regulator mtrA K07670 mtrA; two-component system, OmpR family, response regulator MtrA
D NCTC13354_00800 tcrY_2; Probable sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NCTC13354_00438 tcrY_1; Probable sensor histidine kinase TcrY K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NCTC13354_00485 pdhS; Cell-division control histidine kinase pdhS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D NCTC13354_00799 tcrX; Probable transcriptional regulatory protein TcrX K02483 K02483; two-component system, OmpR family, response regulator
D NCTC13354_01120 desK_1; Sensor histidine kinase desK K07778 desK; two-component system, NarL family, sensor histidine kinase DesK [EC:2.7.13.3]
D NCTC13354_01119 vraR; Response regulator protein vraR K07693 desR; two-component system, NarL family, response regulator DesR
D NCTC13354_01771 devS; Redox sensor histidine kinase response regulator devS K07682 devS; two-component system, NarL family, sensor histidine kinase DevS [EC:2.7.13.3]
D NCTC13354_01770 devR; Transcriptional regulatory protein devR (dosR) K07695 devR; two-component system, NarL family, response regulator DevR
D NCTC13354_01543 pdtaS; Probable sensor histidine kinase pdtaS K00936 pdtaS; two-component system, sensor histidine kinase PdtaS [EC:2.7.13.3]
D NCTC13354_00067 pdtaR; Probable transcriptional regulatory protein pdtaR K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:tbw02035]
D NCTC13354_01629 tcyA; L-cystine-binding protein tcyA precursor K02424 tcyA; L-cystine transport system substrate-binding protein
D NCTC13354_00134 Uncharacterised protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D NCTC13354_00863 Type IV secretion system protein virB11 K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D NCTC13354_01680 Type IV secretion system protein virB11 K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:tbw04812]
D NCTC13354_00285 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NCTC13354_00091 soj_1; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D NCTC13354_01053 soj_2; Sporulation initiation inhibitor protein soj K03496 parA; chromosome partitioning protein
D NCTC13354_01052 parB; Probable chromosome-partitioning protein parB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:tbw04147]
D NCTC13354_00713 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D NCTC13354_00082 gapA; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D NCTC13354_00083 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D NCTC13354_00065 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D NCTC13354_01072 cypB; Peptidyl-prolyl cis-trans isomerase B K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D NCTC13354_00804 groL1; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D NCTC13354_01268 dnaK; Heat shock protein 70 K04043 dnaK; molecular chaperone DnaK
D NCTC13354_00459 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D NCTC13354_00480 Uncharacterized oxidoreductase MSMEG_1603 K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NCTC13354_00488 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D NCTC13354_00557 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D NCTC13354_01818 HIT-like protein HI_0961 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D NCTC13354_00784 ldh2; L-lactate dehydrogenase 2 K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D NCTC13354_00076 Sodium Bile acid symporter family K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D NCTC13354_00306 fadD; Long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_01348 fadK_2; Short-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_00402 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D NCTC13354_01344 thlA; Acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D NCTC13354_00523 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D NCTC13354_00155 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D NCTC13354_01877 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D NCTC13354_01874 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D NCTC13354_01506 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D NCTC13354_01389 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D NCTC13354_01103 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D NCTC13354_00305 serA_1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D NCTC13354_00462 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D NCTC13354_00225 pdhD; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D NCTC13354_00368 etfA; Electron transfer flavoprotein large subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D NCTC13354_00680 gdhA_1; Glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D NCTC13354_00087 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D NCTC13354_00084 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D NCTC13354_00841 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:tbw02048]
D NCTC13354_01183 ygbT; CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI K15342 cas1; CRISP-associated protein Cas1
D NCTC13354_01182 putative ssRNA endonuclease K09951 cas2; CRISPR-associated protein Cas2
D NCTC13354_01189 helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D NCTC13354_01188 CRISPR type I-E/ECOLI-associated protein CasA/Cse1 K19123 casA; CRISPR system Cascade subunit CasA
D NCTC13354_01187 CRISPR-associated Cse2 family protein K19046 casB; CRISPR system Cascade subunit CasB
D NCTC13354_01186 CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E/ECOLI K19124 casC; CRISPR system Cascade subunit CasC
D NCTC13354_01185 CRISPR-associated protein Cas5/CasD, subtype I-E/ECOLI K19125 casD; CRISPR system Cascade subunit CasD
D NCTC13354_01184 CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI K19126 casE; CRISPR system Cascade subunit CasE
D NCTC13354_00998 hsdR; Type I restriction enzyme EcoR124II R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D NCTC13354_00997 Type I restriction enzyme specificity protein MPN_089 K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D NCTC13354_00995 Probable type I restriction enzyme BthVORF4518P M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D NCTC13354_01608 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D NCTC13354_01174 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D NCTC13354_00335 Restriction endonuclease K01156 res; type III restriction enzyme [EC:3.1.21.5]
D NCTC13354_00336 putative methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D NCTC13354_00774 Plasmid stabilisation system protein K06218 relE; mRNA interferase RelE/StbE
D NCTC13354_01070 addiction module toxin, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D NCTC13354_01069 relJ; Antitoxin YefM K19159 yefM; antitoxin YefM
D NCTC13354_00681 higA-1; Antitoxin HigA-1 K21498 higA-1; antitoxin HigA-1
D NCTC13354_00285 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D NCTC13354_01741 gltX_2; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D NCTC13354_01276 gltX_1; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:tbw01504]
D NCTC13354_01679 Phosphotransferase enzyme family K06979 mph; macrolide phosphotransferase
D NCTC13354_00753 norB_1; Quinolone resistance protein norB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
D NCTC13354_00759 norB_2; Quinolone resistance protein norB K08170 norB; MFS transporter, DHA2 family, multidrug resistance protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:tbw03100]
D NCTC13354_00776 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NCTC13354_01788 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NCTC13354_01068 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D NCTC13354_00980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NCTC13354_00436 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NCTC13354_01469 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NCTC13354_00786 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D NCTC13354_00254 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D NCTC13354_01310 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D NCTC13354_00176 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D NCTC13354_01743 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NCTC13354_00726 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D NCTC13354_01744 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NCTC13354_01745 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NCTC13354_01311 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D NCTC13354_00177 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NCTC13354_00413 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NCTC13354_01243 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D NCTC13354_00441 tRNA-His K14226 tRNA-His; tRNA His
D NCTC13354_01066 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D NCTC13354_01736 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NCTC13354_00066 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NCTC13354_00040 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NCTC13354_00708 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D NCTC13354_01083 tRNA-Ser K14228 tRNA-Leu; tRNA Leu
D NCTC13354_01315 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NCTC13354_00443 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D NCTC13354_00260 tRNA-Met K14230 tRNA-Met; tRNA Met
D NCTC13354_00581 tRNA-Met K14230 tRNA-Met; tRNA Met
D NCTC13354_01528 tRNA-Met K14230 tRNA-Met; tRNA Met
D NCTC13354_01309 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D NCTC13354_00412 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NCTC13354_00874 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NCTC13354_00097 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D NCTC13354_00910 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NCTC13354_00909 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NCTC13354_00825 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NCTC13354_00895 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D NCTC13354_00850 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NCTC13354_00582 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NCTC13354_00808 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D NCTC13354_00574 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D NCTC13354_00583 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D NCTC13354_00175 tRNA-Val K14237 tRNA-Val; tRNA Val
D NCTC13354_00242 tRNA-Val K14237 tRNA-Val; tRNA Val
D NCTC13354_00178 tRNA-Val K14237 tRNA-Val; tRNA Val
D NCTC13354_01618 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D NCTC13354_01619 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D NCTC13354_01620 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D NCTC13354_01695 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D NCTC13354_01010 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D NCTC13354_00755 yghZ_3; L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D NCTC13354_00408 yghZ_2; L-glyceraldehyde 3-phosphate reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-]
D NCTC13354_01418 Protoporphyrinogen oxidase K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38]
D NCTC13354_01275 Uncharacterised protein K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40]
D NCTC13354_00367 Electron transfer flavoprotein-ubiquinone oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-]
D NCTC13354_00666 azoR; FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D NCTC13354_00694 msrA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D NCTC13354_01313 msrB; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D NCTC13354_01735 bcp; Putative peroxiredoxin Rv2521/MT2597 K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NCTC13354_01301 tpx; Thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D NCTC13354_00584 fprA; NADPH-ferredoxin reductase fprA K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D NCTC13354_01125 anaerobic ribonucleotide reductase-activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D NCTC13354_00447 pflA; Pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D NCTC13354_01322 mshD; Mycothiol acetyltransferase K15520 mshD; mycothiol synthase [EC:2.3.1.189]
D NCTC13354_00104 lnt; Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D NCTC13354_00064 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D NCTC13354_01597 polA_2; DNA polymerase I, thermostable K02334 dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]
D NCTC13354_00665 ymdB_1; O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D NCTC13354_01084 ymdB_2; O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D NCTC13354_01787 Phosphoglyceromutase K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85]
D NCTC13354_01670 error-prone DNA polymerase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D NCTC13354_00022 phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D NCTC13354_00735 ycfH; Uncharacterized deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D NCTC13354_01492 Protein of uncharacterised function DUF91 K07503 nucS; endonuclease [EC:3.1.-.-]
D NCTC13354_01562 N-acetyl-anhydromuranmyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D NCTC13354_00667 def_2; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NCTC13354_00253 def_1; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D NCTC13354_00692 mshB; 1D-myo-inositol 2-acetamido-2-deoxy-alpha-D-glucopyranoside deacetylase K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115]
D NCTC13354_00593 bchI; Magnesium-chelatase 38 kDa subunit K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D NCTC13354_01205 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D NCTC13354_00501 nnr; Nicotinamide nucleotide repair protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D NCTC13354_01302 carbamoyl phosphate synthase-like protein K17810 asl; D-aspartate ligase [EC:6.3.1.12]
D NCTC13354_00048 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13]
D NCTC13354_00890 Calcium-transporting ATPase lmo0841 K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D NCTC13354_00426 lutA; Lactate utilization protein A K18928 lldE; L-lactate dehydrogenase complex protein LldE
D NCTC13354_00427 lutB; Lactate utilization protein B K18929 lldF; L-lactate dehydrogenase complex protein LldF
D NCTC13354_00428 Uncharacterised ACR, YkgG family COG1556 K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D NCTC13354_00019 nifU; NifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D NCTC13354_00369 etfB; Electron transfer flavoprotein small subunit K03521 fixA; electron transfer flavoprotein beta subunit
D NCTC13354_00366 ferredoxin-like protein FixX K03855 fixX; ferredoxin like protein
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
D NCTC13354_01092 nrdI; ribonucleotide reductase stimulatory protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D NCTC13354_00446 Predicted enzyme with a TIM-barrel fold K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D NCTC13354_00734 Uncharacterized protein conserved in bacteria K21688 rpfB; resuscitation-promoting factor RpfB
D NCTC13354_00629 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase K22907 ppgS; polyprenyl-phospho-N-acetylgalactosaminyl synthase
C 99987 Cofactor metabolism
D NCTC13354_00506 abgT; Aminobenzoyl-glutamate transport protein K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
D NCTC13354_01760 azr; NADPH azoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
D NCTC13354_01633 Predicted flavoprotein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D NCTC13354_00795 csp; Cold shock-like protein K03704 cspA; cold shock protein
C 99974 Translation
C 99975 Protein processing
D NCTC13354_01727 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D NCTC13354_00407 tig; Trigger factor K03545 tig; trigger factor
D NCTC13354_01691 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D NCTC13354_01091 nrdH; Glutaredoxin-like protein nrdH K06191 nrdH; glutaredoxin-like protein NrdH
D NCTC13354_00376 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D NCTC13354_00684 rmuC; DNA recombination protein rmuC K09760 rmuC; DNA recombination protein RmuC
D NCTC13354_00377 Uncharacterised protein family UPF0102 K07460 yraN; putative endonuclease
D NCTC13354_00050 Inactivated superfamily I helicase K07465 K07465; putative RecB family exonuclease
D NCTC13354_00375 smf; DNA protecting protein DprA K04096 smf; DNA processing protein
D NCTC13354_00141 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D NCTC13354_00946 phage/plasmid primase, P4 family, C-terminal domain K06919 K06919; putative DNA primase/helicase
D NCTC13354_01593 Uncharacterized conserved protein K06919 K06919; putative DNA primase/helicase
C 99979 Viral proteins
C 99998 Others
D NCTC13354_00797 Phage shock protein A homolog K03969 pspA; phage shock protein A
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D NCTC13354_00411 yihP; Inner membrane symporter yihP K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D NCTC13354_01329 pitA; Low-affinity inorganic phosphate transporter 1 K03306 TC.PIT; inorganic phosphate transporter, PiT family
D NCTC13354_01331 Na+/alanine symporter K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D NCTC13354_01532 brnQ; LIV-II K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D NCTC13354_00604 bile acid transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D NCTC13354_00607 bile acid transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D NCTC13354_01722 putative transporter K07085 K07085; putative transport protein
D NCTC13354_00457 putative transporter K07085 K07085; putative transport protein
C 99978 Cell growth
D NCTC13354_01055 R3H domain K06346 jag; spoIIIJ-associated protein
D NCTC13354_01558 tnpR_1; Transposon Tn3 resolvase K06400 spoIVCA; site-specific DNA recombinase
D NCTC13354_01559 tnpR_2; Transposon Tn3 resolvase K06400 spoIVCA; site-specific DNA recombinase
C 99993 Cell motility
C 99995 Signaling proteins
D NCTC13354_01197 cstA; Carbon starvation protein A K06200 cstA; carbon starvation protein
D NCTC13354_01842 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
C 99992 Structural proteins
D NCTC13354_01041 yhhT_2; pheromone autoinducer 2 transporter K11744 tqsA; AI-2 transport protein TqsA
D NCTC13354_00630 Uncharacterized conserved protein K09153 K09153; small membrane protein
C 99994 Others
D NCTC13354_00840 phoU; Phosphate transport system protein phoU homolog K02039 phoU; phosphate transport system protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D NCTC13354_00857 ATP-dependent helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D NCTC13354_00142 mmpL8; Membrane transport protein mmpL8 K06994 K06994; putative drug exporter of the RND superfamily
D NCTC13354_00662 rssA; NTE family protein rssA K07001 K07001; NTE family protein
D NCTC13354_00014 cysteine desulfurase activator complex subunit SufB K09014 sufB; Fe-S cluster assembly protein SufB
D NCTC13354_00015 sufD; FeS cluster assembly protein sufD K09015 sufD; Fe-S cluster assembly protein SufD
D NCTC13354_01652 Ribonuclease BN-like family K07058 K07058; membrane protein
D NCTC13354_00334 LemA family K03744 lemA; LemA protein
D NCTC13354_01180 Membrane protein of uncharacterised function K08972 K08972; putative membrane protein
D NCTC13354_01380 Bacterial membrane flanked domain K08981 K08981; putative membrane protein
C 99997 Function unknown
D NCTC13354_00798 Uncharacterised protein K06860 K06860; putative heme uptake system protein
D NCTC13354_01846 Alpha/beta hydrolase family K06889 K06889; uncharacterized protein
D NCTC13354_00384 Predicted RNA-binding protein (contains KH domain) K06960 K06960; uncharacterized protein
D NCTC13354_00355 Predicted acetyltransferase K06976 K06976; uncharacterized protein
D NCTC13354_00252 Epimerase family protein SA0724 K07071 K07071; uncharacterized protein
D NCTC13354_01237 Predicted nucleotidyltransferases K07075 K07075; uncharacterized protein
D NCTC13354_00679 Nitroreductase family K07078 K07078; uncharacterized protein
D NCTC13354_01662 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D NCTC13354_00873 phosphodiesterase YaeI K07098 K07098; uncharacterized protein
D NCTC13354_01282 Uncharacterized oxidoreductase SAV2478 K07124 K07124; uncharacterized protein
D NCTC13354_00802 gno; Gluconate 5-dehydrogenase K07124 K07124; uncharacterized protein
D NCTC13354_00768 Uncharacterised protein K07133 K07133; uncharacterized protein
D NCTC13354_00773 Uncharacterised protein K07133 K07133; uncharacterized protein
D NCTC13354_01003 Uncharacterised protein K07133 K07133; uncharacterized protein
D NCTC13354_00683 Uncharacterised protein K07149 K07149; uncharacterized protein
D NCTC13354_00237 Uncharacterised protein K07164 K07164; uncharacterized protein
D NCTC13354_01057 yidD; Putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D NCTC13354_00751 Uncharacterized conserved protein K09004 K09004; uncharacterized protein
D NCTC13354_00711 Protein of uncharacterised function (DUF501) K09009 K09009; uncharacterized protein
D NCTC13354_01519 Uncharacterised protein family (UPF0182) K09118 K09118; uncharacterized protein
D NCTC13354_01379 Bacterial membrane flanked domain K09167 K09167; uncharacterized protein
D NCTC13354_00423 yedI; Inner membrane protein yedI K09781 K09781; uncharacterized protein
D NCTC13354_01537 ybaN; Inner membrane protein ybaN K09790 K09790; uncharacterized protein
D NCTC13354_00236 yaaA; Protein of uncharacterised function (DUF328) K09861 K09861; uncharacterized protein
D NCTC13354_01330 Phosphate transport regulator (distant homolog of PhoU) K07220 K07220; uncharacterized protein
D NCTC13354_00350 Protein of uncharacterised function (DUF448) K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024