+D GENES KO #

  KEGG Orthology (KO) - Thermodesulfobacterium commune

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:tcm00010] D HL41_07690 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D HL41_02335 phosphoheptose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HL41_03665 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HL41_04310 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D HL41_06160 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HL41_03590 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HL41_06165 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HL41_00645 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HL41_02475 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HL41_06595 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HL41_02420 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HL41_06185 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HL41_08245 hypothetical protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HL41_07335 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02225 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02220 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_07340 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_02235 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07325 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07330 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_02230 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_04340 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HL41_09075 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D HL41_03375 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_01550 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_07315 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D HL41_00255 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HL41_05125 aldehyde:ferredoxin oxidoreductase K11389 gapor; glyceraldehyde-3-phosphate dehydrogenase (ferredoxin) [EC:1.2.7.6] C 00020 Citrate cycle (TCA cycle) [PATH:tcm00020] D HL41_01010 histone-lysine N-methyltransferase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3] D HL41_00300 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D HL41_04275 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HL41_04340 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HL41_04345 hypothetical protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D HL41_04330 tungsten formylmethanofuran dehydrogenase K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D HL41_06795 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D HL41_00125 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D HL41_05185 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HL41_00425 biotin attachment protein K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D HL41_07335 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02225 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02220 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_07340 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_02235 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07325 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07330 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_02230 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:tcm00030] D HL41_02335 phosphoheptose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HL41_07515 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HL41_05665 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HL41_03505 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D HL41_00175 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HL41_00255 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HL41_00730 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HL41_02390 aldehyde:ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D HL41_04310 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D HL41_03665 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:tcm00040] D HL41_03795 D-galactarate dehydratase K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7] D HL41_03790 carbohydrate hydrolase K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7] D HL41_01970 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HL41_01910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HL41_07515 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HL41_00475 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:tcm00051] D HL41_06270 cpsB; mannose-1-phosphate guanyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D HL41_00255 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HL41_00475 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D HL41_03665 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HL41_04310 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D HL41_06160 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HL41_00175 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:tcm00052] D HL41_06465 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HL41_01910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HL41_00255 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HL41_07690 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D HL41_03665 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism [PATH:tcm00053] D HL41_01970 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HL41_00470 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:tcm00500] D HL41_01910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HL41_06740 hypothetical protein K16150 K16150; glycogen synthase [EC:2.4.1.11] D HL41_06745 alpha-amylase K07405 E3.2.1.1A; alpha-amylase [EC:3.2.1.1] D HL41_04365 glycosyl transferase family 1 K13057 treT; trehalose synthase [EC:2.4.1.245] D HL41_00255 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HL41_07690 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D HL41_02335 phosphoheptose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:tcm00520] D HL41_06800 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HL41_03610 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HL41_02735 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D HL41_07490 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HL41_06640 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HL41_06315 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D HL41_05485 hypothetical protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D HL41_03270 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] D HL41_07690 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D HL41_00255 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HL41_01910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HL41_01970 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HL41_06465 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HL41_00470 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D HL41_02335 phosphoheptose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HL41_06270 cpsB; mannose-1-phosphate guanyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00620 Pyruvate metabolism [PATH:tcm00620] D HL41_03375 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_01550 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_07335 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02225 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02220 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_07340 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_02235 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07325 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07330 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_02230 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_04340 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HL41_09075 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D HL41_02420 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HL41_03090 acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HL41_09020 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D HL41_07315 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D HL41_01565 hypothetical protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D HL41_01965 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D HL41_00820 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D HL41_00425 biotin attachment protein K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D HL41_05185 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HL41_06795 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D HL41_00125 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D HL41_00320 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D HL41_06185 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HL41_08245 hypothetical protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HL41_05590 transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D HL41_05770 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:tcm00630] D HL41_03375 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_01550 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_05185 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HL41_00300 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D HL41_02275 hypothetical protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D HL41_07300 FAD-binding protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D HL41_07295 iron-sulfur cluster-binding protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D HL41_04185 hypothetical protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D HL41_08895 hypothetical protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D HL41_02130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_03975 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HL41_04320 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D HL41_08585 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D HL41_08590 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D HL41_08580 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit D HL41_08375 oxidoreductase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D HL41_08640 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit D HL41_08380 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma C 00640 Propanoate metabolism [PATH:tcm00640] D HL41_03375 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_01550 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_07315 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D HL41_07335 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02225 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02220 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_07340 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_02235 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07325 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07330 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_02230 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_03090 acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] C 00650 Butanoate metabolism [PATH:tcm00650] D HL41_07335 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02225 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02220 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_07340 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_02235 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07325 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07330 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_02230 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_04340 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HL41_05655 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HL41_05660 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:tcm00660] D HL41_05655 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HL41_05660 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HL41_01260 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HL41_01255 leuD; 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HL41_01830 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:tcm00562] D HL41_07180 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HL41_06160 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:tcm00190] D HL41_06140 NADH-quinone oxidoreductase K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D HL41_08675 hypothetical protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D HL41_08660 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D HL41_06135 NADH dehydrogenase K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D HL41_08680 hypothetical protein K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D HL41_07345 hypothetical protein K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D HL41_08665 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D HL41_06125 NADH dehydrogenase K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D HL41_08685 NADH-quinone oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D HL41_06120 NADH-quinone oxidoreductase K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D HL41_08670 NADH-ubiquinone oxidoreductase K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D HL41_06105 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D HL41_08695 hypothetical protein K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D HL41_06100 NADH:ubiquinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D HL41_06095 NADH:ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D HL41_06090 hypothetical protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D HL41_05815 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HL41_02400 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HL41_02395 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HL41_01085 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HL41_01095 ATP F0F1 synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HL41_01090 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HL41_01080 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HL41_01100 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HL41_00080 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HL41_01070 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HL41_01075 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HL41_00075 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HL41_01145 inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation by Calvin cycle [PATH:tcm00710] D HL41_06165 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HL41_03590 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HL41_05665 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HL41_00175 ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HL41_06160 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HL41_07515 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HL41_03505 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D HL41_00320 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D HL41_05185 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00720 Other carbon fixation pathways [PATH:tcm00720] D HL41_07335 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02225 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02220 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_07340 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_02235 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07325 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07330 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_02230 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_06185 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HL41_08245 hypothetical protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HL41_00320 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D HL41_00425 biotin attachment protein K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D HL41_05185 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HL41_06795 fumarate hydratase K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D HL41_00125 fumarate hydratase K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D HL41_04340 2-oxoglutarate oxidoreductase K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HL41_04345 hypothetical protein K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D HL41_04330 tungsten formylmethanofuran dehydrogenase K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D HL41_04275 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HL41_00300 aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3] D HL41_03090 acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HL41_07655 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HL41_07615 dihydropteroate synthase K15023 acsE; 5-methyltetrahydrofolate corrinoid/iron sulfur protein methyltransferase [EC:2.1.1.258] D HL41_07625 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta K14138 acsB; acetyl-CoA synthase [EC:2.3.1.169] D HL41_07620 acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D HL41_03375 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_01550 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:tcm00680] D HL41_08585 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D HL41_08590 formate dehydrogenase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D HL41_08580 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit D HL41_08375 oxidoreductase K00124 fdoH; formate dehydrogenase iron-sulfur subunit D HL41_08640 4Fe-4S ferredoxin K00124 fdoH; formate dehydrogenase iron-sulfur subunit D HL41_08380 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma D HL41_07620 acetyl-CoA decarbonylase/synthase complex subunit gamma K00197 cdhE; acetyl-CoA decarbonylase/synthase, CODH/ACS complex subunit gamma [EC:2.1.1.245] D HL41_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HL41_06595 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HL41_00320 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D HL41_05185 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HL41_04310 fructose 1,6-bisphosphatase K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D HL41_03665 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HL41_00015 heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HL41_09205 heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HL41_09230 heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HL41_09200 heterodisulfide reductase K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HL41_09235 heterodisulfide reductase K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D HL41_09220 F420-nonreducing hydrogenase K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5] D HL41_00025 F420-nonreducing hydrogenase K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5] D HL41_09215 F420-nonreducing hydrogenase K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5] D HL41_03375 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_01550 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_07335 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02225 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02220 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_07340 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_02235 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07325 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07330 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_02230 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_06185 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HL41_08245 hypothetical protein K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HL41_00645 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HL41_02475 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HL41_04940 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HL41_03860 hypothetical protein K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:tcm00910] D HL41_00355 cytochrome C nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D HL41_00350 cytochrome C nitrite reductase K15876 nrfH; cytochrome c nitrite reductase small subunit D HL41_06410 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D HL41_00270 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D HL41_02130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_03975 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism [PATH:tcm00920] D HL41_08905 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D HL41_03160 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D HL41_08920 adenylylsulfate reductase K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D HL41_08915 adenylylsulfate reductase K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D HL41_05695 sulfite reductase K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D HL41_01625 menaquinol oxidoreductase K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10] D HL41_01630 menaquinol oxidoreductase K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10] D HL41_01635 cytochrome C K27189 dsrJ; [DsrC]-trisulfide reductase subunit J D HL41_01640 4Fe-4S ferredoxin K27190 dsrO; [DsrC]-trisulfide reductase subunit O D HL41_08650 thiosulfate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D HL41_04470 nitrate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:tcm00061] D HL41_03090 acetyl-CoA carboxylase K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HL41_00165 acyl carrier protein K02078 acpP; acyl carrier protein D HL41_00775 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HL41_00170 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HL41_05755 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HL41_04980 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:tcm00071] D HL41_03850 AAS bifunctional protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D HL41_09075 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism D HL41_01590 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] C 00564 Glycerophospholipid metabolism [PATH:tcm00564] D HL41_04115 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D HL41_01590 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HL41_03850 AAS bifunctional protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D HL41_00895 hypothetical protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D HL41_04140 hypothetical protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D HL41_01430 hypothetical protein K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:tcm00230] D HL41_00255 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HL41_00730 phosphoribosylpyrophosphate synthetase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HL41_01295 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D HL41_00685 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HL41_03655 phosphoribosylformylglycinamidine synthase K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3] D HL41_00870 phosphoribosylaminoimidazole synthetase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D HL41_01300 N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D HL41_02435 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D HL41_08830 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HL41_04955 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HL41_01940 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HL41_08310 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HL41_04450 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D HL41_02705 hypothetical protein K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HL41_02000 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D HL41_06665 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HL41_03545 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HL41_02670 NTP phosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D HL41_00750 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HL41_00910 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D HL41_01285 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HL41_06670 hypothetical protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D HL41_03080 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HL41_01525 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D HL41_05340 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HL41_01250 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HL41_04555 HIT family hydrolase K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D HL41_08905 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] C 00240 Pyrimidine metabolism [PATH:tcm00240] D HL41_03105 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HL41_05900 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HL41_07455 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HL41_07450 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D HL41_09155 hypothetical protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D HL41_04570 orotidine 5-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D HL41_01345 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D HL41_03545 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HL41_01250 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HL41_00285 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D HL41_03600 hypothetical protein K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D HL41_08310 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HL41_06720 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D HL41_01525 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16] D HL41_05505 CMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D HL41_03405 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HL41_03410 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:tcm00250] D HL41_04290 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HL41_01730 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D HL41_00650 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HL41_01015 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D HL41_08435 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D HL41_03500 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HL41_00605 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HL41_03080 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HL41_08830 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HL41_07455 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HL41_02130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_03975 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_03105 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HL41_05900 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HL41_00685 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HL41_03610 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:tcm00260] D HL41_05585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HL41_02690 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HL41_01465 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HL41_01045 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D HL41_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HL41_00645 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HL41_02475 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HL41_04940 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HL41_04320 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D HL41_07965 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HL41_07960 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:tcm00270] D HL41_07505 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D HL41_04735 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HL41_04200 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D HL41_06780 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D HL41_05515 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D HL41_01540 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D HL41_03395 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D HL41_04740 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D HL41_05585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HL41_02690 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HL41_01465 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HL41_05065 hypothetical protein K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] D HL41_01890 (Fe-S)-binding protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D HL41_03820 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HL41_04290 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HL41_01730 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D HL41_05185 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D HL41_04940 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:tcm00280] D HL41_03820 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HL41_02530 6-phosphogluconate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:tcm00290] D HL41_01260 3-isopropylmalate dehydratase K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D HL41_01255 leuD; 3-isopropylmalate dehydratase K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D HL41_01830 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D HL41_05655 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HL41_05660 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HL41_08870 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HL41_05005 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HL41_03820 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HL41_01015 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D HL41_05590 transferase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D HL41_05770 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:tcm00300] D HL41_01465 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HL41_05585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HL41_02690 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HL41_07980 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HL41_08170 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D HL41_08200 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HL41_07975 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HL41_07175 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D HL41_00490 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HL41_04815 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HL41_04810 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D HL41_01390 FAD-dependent oxidoreductase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] C 00220 Arginine biosynthesis [PATH:tcm00220] D HL41_02245 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D HL41_03500 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HL41_00605 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HL41_00685 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HL41_02130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_03975 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_03105 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HL41_05900 carbamoyl phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HL41_04290 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HL41_01730 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D HL41_01015 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D HL41_01195 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D HL41_08315 hypothetical protein K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D HL41_03245 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D HL41_05620 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D HL41_08200 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:tcm00330] D HL41_04665 creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D HL41_06780 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D HL41_05515 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D HL41_04200 S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D HL41_09180 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D HL41_06475 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HL41_06510 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D HL41_04290 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HL41_01730 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:tcm00340] D HL41_04045 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D HL41_01330 imidazole glycerol phosphate synthase K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D HL41_03530 imidazole glycerol phosphate synthase K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D HL41_05610 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D HL41_02880 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HL41_03660 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:tcm00350] D HL41_04290 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HL41_01730 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D HL41_02880 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HL41_01735 hypothetical protein K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D HL41_09075 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00360 Phenylalanine metabolism [PATH:tcm00360] D HL41_08555 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D HL41_07540 phenylacetic acid degradation protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D HL41_04290 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HL41_01730 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D HL41_02880 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:tcm00400] D HL41_07910 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HL41_07970 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D HL41_01950 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D HL41_01960 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D HL41_01955 hypothetical protein K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D HL41_00315 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D HL41_07200 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HL41_07195 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HL41_06605 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D HL41_04755 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D HL41_04055 hypothetical protein K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D HL41_07965 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HL41_07960 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D HL41_02040 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D HL41_04705 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HL41_04290 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HL41_01730 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D HL41_02880 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:tcm00410] D HL41_09055 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D HL41_09050 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:tcm00450] D HL41_07505 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D HL41_00620 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HL41_08750 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HL41_06470 oxidoreductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HL41_08905 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D HL41_01020 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D HL41_00415 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D HL41_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:tcm00470] D HL41_01370 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HL41_00685 phosphoribosylformylglycinamidine synthase K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D HL41_08190 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HL41_07975 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HL41_00490 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HL41_08410 hypothetical protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma C 00480 Glutathione metabolism [PATH:tcm00480] D HL41_04275 isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HL41_06780 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D HL41_05515 spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:tcm00540] D HL41_04975 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D HL41_03440 hypothetical protein K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D HL41_04970 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D HL41_04960 hypothetical protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D HL41_04545 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D HL41_09135 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D HL41_03485 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D HL41_03480 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D HL41_03140 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D HL41_02660 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D HL41_02300 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D HL41_04440 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D HL41_09035 glycerol-3-phosphate cytidylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D HL41_02925 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D HL41_06285 dehydrogenase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168] D HL41_06280 hypothetical protein K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71] D HL41_04435 hypothetical protein K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D HL41_06260 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:tcm00541] D HL41_01910 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HL41_06465 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HL41_01970 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D HL41_00470 nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D HL41_06430 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HL41_06420 spore coat protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HL41_06425 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HL41_06415 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D HL41_06270 cpsB; mannose-1-phosphate guanyltransferase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D HL41_07490 hypothetical protein K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HL41_06315 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D HL41_05485 hypothetical protein K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D HL41_03270 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00550 Peptidoglycan biosynthesis [PATH:tcm00550] D HL41_06640 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HL41_04790 hypothetical protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HL41_04815 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HL41_01370 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HL41_04810 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HL41_01355 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HL41_04805 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HL41_09175 hypothetical protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:tcm00730] D HL41_06710 phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D HL41_04090 hypothetical protein K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D HL41_06805 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HL41_08440 thiH; thiamine biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D HL41_01820 ribulose-1,5-biphosphate synthetase K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D HL41_07235 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D HL41_03550 hypothetical protein K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D HL41_05340 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:tcm00740] D HL41_00245 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HL41_01570 5-amino-6-(5-phosphoribosylamino)uracil reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D HL41_06170 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D HL41_04745 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D HL41_02940 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:tcm00750] D HL41_01165 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D HL41_00835 metalloprotease K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D HL41_01045 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:tcm00760] D HL41_00650 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D HL41_00275 quinolinate synthetase K03517 nadA; quinolinate synthase [EC:2.5.1.72] D HL41_01150 hypothetical protein K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D HL41_04450 purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D HL41_02705 hypothetical protein K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HL41_08310 stationary phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HL41_06505 hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D HL41_01250 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HL41_03970 hypothetical protein K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1] D HL41_04415 sigma factor K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D HL41_06765 hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:tcm00770] D HL41_05655 acetolactate synthase catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D HL41_05660 acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D HL41_08870 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HL41_05005 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D HL41_05980 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D HL41_02520 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D HL41_09050 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HL41_02025 Baf family transcriptional regulator K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D HL41_07815 hypothetical protein K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D HL41_01250 nucleoside triphosphate hydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D HL41_01660 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D HL41_05875 hypothetical protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D HL41_00180 hypothetical protein K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D HL41_03820 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HL41_09055 aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:tcm00780] D HL41_00170 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HL41_05755 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HL41_04980 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HL41_03100 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HL41_08280 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism D HL41_04320 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:tcm00790] D HL41_07610 GTP cyclohydrolase K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D HL41_00670 hypothetical protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16] D HL41_02750 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D HL41_00245 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HL41_03300 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D HL41_03305 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D HL41_00590 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HL41_03680 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D HL41_04850 hypothetical protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D HL41_00405 molybdenum cofactor biosynthesis protein MoeA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HL41_05025 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HL41_08150 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HL41_08570 LysR family transcriptional regulator K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D HL41_08215 molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D HL41_06200 hypothetical protein K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:tcm00670] D HL41_07655 methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HL41_05500 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HL41_04955 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HL41_01940 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HL41_02840 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HL41_03410 hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D HL41_01105 hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:tcm00860] D HL41_03130 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HL41_06555 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D HL41_00480 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D HL41_02340 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HL41_03645 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D HL41_03640 HemD protein K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D HL41_04985 hypothetical protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D HL41_04215 hypothetical protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D HL41_00210 transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D HL41_01935 Fe-S oxidoreductase K22226 ahbC; Fe-coproporphyrin III synthase D HL41_01650 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D HL41_07420 hypothetical protein K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D HL41_09110 hypothetical protein K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D HL41_09105 magnesium chelatase K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:tcm00130] D HL41_05160 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D HL41_08520 hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D HL41_02940 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D HL41_07400 hypothetical protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D HL41_07405 hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D HL41_03805 radical SAM protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D HL41_07410 hypothetical protein K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D HL41_06220 hypothetical protein K11783 mqnB; futalosine hydrolase [EC:3.2.2.26] D HL41_07415 hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D HL41_06225 hypothetical protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] D HL41_00600 hypothetical protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:tcm00900] D HL41_00310 hypothetical protein K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D HL41_00725 hypothetical protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D HL41_08125 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D HL41_08360 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D HL41_02940 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D HL41_01275 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HL41_08900 hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D HL41_01355 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HL41_02035 hypothetical protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D HL41_05665 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:tcm00523] D HL41_06430 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HL41_06420 spore coat protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HL41_06425 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HL41_06415 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics [PATH:tcm01055] D HL41_07275 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D HL41_06420 spore coat protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:tcm00332] D HL41_06475 gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D HL41_06510 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:tcm00261] D HL41_07275 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] D HL41_08905 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D HL41_05585 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D HL41_02690 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HL41_07980 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HL41_08170 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:tcm00521] D HL41_07690 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] D HL41_00255 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HL41_07180 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D HL41_06430 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HL41_06420 spore coat protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D HL41_06425 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D HL41_06415 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D HL41_07690 hypothetical protein K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:tcm00525] D HL41_06430 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D HL41_06420 spore coat protein K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:tcm00401] D HL41_04705 hypothetical protein K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HL41_04290 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HL41_01730 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D HL41_02880 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D HL41_07200 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HL41_07195 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D HL41_05755 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D HL41_00165 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:tcm00999] D HL41_04735 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HL41_01950 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation [PATH:tcm00627] D HL41_09020 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D HL41_02940 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:tcm00625] D HL41_09075 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:tcm00633] D HL41_05135 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D HL41_07335 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02225 porA; pyruvate ferredoxin oxidoreductase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HL41_02220 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_07340 pyruvate ferredoxin oxidoreductase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HL41_02235 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07325 pyruvate synthase K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HL41_07330 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_02230 pyruvate ferredoxin oxidoreductase K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HL41_05695 sulfite reductase K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] C 00642 Ethylbenzene degradation C 00643 Styrene degradation D HL41_01735 hypothetical protein K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:tcm00626] D HL41_09075 alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:tcm03020] D HL41_09000 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HL41_09005 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HL41_05305 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HL41_05015 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:tcm03010] D HL41_06680 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1 D HL41_01335 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HL41_05415 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HL41_05310 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HL41_05360 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HL41_08845 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HL41_05465 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HL41_05375 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HL41_05625 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HL41_05450 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HL41_05315 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HL41_05470 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HL41_05320 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HL41_05380 hypothetical protein K02954 RP-S14; small subunit ribosomal protein S14 D HL41_09010 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HL41_00450 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HL41_05400 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HL41_08850 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HL41_05425 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HL41_03120 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HL41_04235 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HL41_08985 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HL41_05430 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HL41_05445 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HL41_05440 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HL41_05385 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HL41_05370 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HL41_08995 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HL41_08855 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HL41_08990 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HL41_08980 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HL41_05630 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HL41_05395 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HL41_05350 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HL41_05410 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HL41_05365 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HL41_01440 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HL41_05970 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HL41_01580 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HL41_05420 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HL41_05435 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HL41_05390 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HL41_00735 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D HL41_01585 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HL41_01290 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HL41_05405 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HL41_05355 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HL41_08060 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HL41_00765 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HL41_08960 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HL41_04060 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HL41_05975 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HL41_05325 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HL41_06855 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HL41_06840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HL41_06835 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:tcm00970] D HL41_03115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HL41_06845 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HL41_02905 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HL41_07495 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HL41_04000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HL41_04410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HL41_05235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HL41_02330 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HL41_03295 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HL41_06620 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HL41_06405 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HL41_02865 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HL41_02195 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HL41_08945 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HL41_02060 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HL41_02215 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HL41_01435 tRNA-His K14226 tRNA-His; tRNA His D HL41_06850 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HL41_04510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_05100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_08805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_05845 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_01785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_02200 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HL41_07945 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HL41_00365 tRNA-Met K14230 tRNA-Met; tRNA Met D HL41_00675 tRNA-Met K14230 tRNA-Met; tRNA Met D HL41_03285 tRNA-Met K14230 tRNA-Met; tRNA Met D HL41_00110 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HL41_06770 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HL41_02890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HL41_04875 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HL41_08285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HL41_08390 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HL41_06615 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HL41_02650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HL41_08950 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HL41_08370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HL41_06610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HL41_08965 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HL41_08940 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HL41_03430 tRNA-Val K14237 tRNA-Val; tRNA Val D HL41_00055 tRNA-Val K14237 tRNA-Val; tRNA Val D HL41_08840 tRNA-Val K14237 tRNA-Val; tRNA Val D HL41_07535 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D HL41_03130 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HL41_04100 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HL41_03390 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HL41_04095 gatC; glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HL41_04725 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HL41_01230 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HL41_00865 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HL41_00860 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HL41_03425 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HL41_00240 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HL41_01020 selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D HL41_05600 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HL41_07435 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HL41_00415 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HL41_02840 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HL41_03240 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HL41_04265 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HL41_01850 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HL41_00935 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HL41_01185 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HL41_08530 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HL41_07205 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HL41_05965 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HL41_05960 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HL41_03635 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HL41_03690 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:tcm03060] D HL41_05345 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HL41_02845 preprotein translocase subunit SecF K12257 secDF; SecD/SecF fusion protein D HL41_01720 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D HL41_04075 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HL41_00455 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HL41_08385 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D HL41_05675 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D HL41_00680 preprotein translocase K03118 tatC; sec-independent protein translocase protein TatC D HL41_05670 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC D HL41_00635 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC D HL41_03035 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HL41_01845 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:tcm04122] D HL41_06805 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HL41_03770 preprotein translocase subunit TatB K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D HL41_01880 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HL41_08150 hypothetical protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HL41_00405 molybdenum cofactor biosynthesis protein MoeA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HL41_02380 molybdenum cofactor biosynthesis protein MoaD K03636 moaD; sulfur-carrier protein D HL41_02375 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D HL41_05025 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] C 03050 Proteasome C 03018 RNA degradation [PATH:tcm03018] D HL41_06595 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HL41_03380 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HL41_03730 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HL41_05240 transcription termination factor Rho K03628 rho; transcription termination factor Rho D HL41_01520 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-] D HL41_03665 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HL41_01160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HL41_04625 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HL41_05295 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:tcm03030] D HL41_08020 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HL41_02425 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HL41_02010 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HL41_08860 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HL41_06560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HL41_02945 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HL41_01445 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HL41_03685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:tcm03410] D HL41_04715 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HL41_00705 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D HL41_00850 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HL41_06010 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HL41_06460 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HL41_03685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:tcm03420] D HL41_05035 hypothetical protein K03701 uvrA; excinuclease ABC subunit A D HL41_01985 hypothetical protein K03701 uvrA; excinuclease ABC subunit A D HL41_08035 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D HL41_01875 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HL41_03685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:tcm03430] D HL41_06500 hypothetical protein K03555 mutS; DNA mismatch repair protein MutS D HL41_04230 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2 D HL41_05175 hypothetical protein K03572 mutL; DNA mismatch repair protein MutL D HL41_01875 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HL41_01265 hypothetical protein K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HL41_06460 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HL41_06560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HL41_08020 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HL41_02010 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HL41_02425 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HL41_03685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:tcm03440] D HL41_06460 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HL41_06560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HL41_07465 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D HL41_01405 recombinase RecR K06187 recR; recombination protein RecR D HL41_06585 recombinase RecA K03553 recA; recombination protein RecA D HL41_05835 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HL41_04695 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HL41_08020 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HL41_02010 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HL41_02425 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HL41_01915 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:tcm02010] D HL41_04540 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D HL41_04535 tungstate transporter permease K05773 tupB; tungstate transport system permease protein D HL41_04530 sugar ABC transporter ATPase K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D HL41_04990 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HL41_05000 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HL41_04995 ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HL41_07830 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HL41_08335 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HL41_08330 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D HL41_08320 hypothetical protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HL41_02850 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D HL41_01240 hypothetical protein K09816 znuB; zinc transport system permease protein D HL41_01245 hypothetical protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HL41_02485 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D HL41_02495 cobalt ABC transporter permease K02008 cbiQ; cobalt/nickel transport system permease protein D HL41_02500 cobalt ABC transporter ATPase K02006 cbiO; cobalt/nickel transport system ATP-binding protein D HL41_08875 hypothetical protein K10094 cbiK; nickel transport protein D HL41_02185 hypothetical protein K10094 cbiK; nickel transport protein D HL41_02480 membrane protein K10094 cbiK; nickel transport protein D HL41_02490 hypothetical protein K16915 cbiL; nickel transport protein D HL41_00940 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D HL41_00945 hypothetical protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D HL41_00155 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D HL41_00160 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D HL41_02765 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HL41_05700 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D HL41_04430 hypothetical protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:tcm03070] D HL41_03185 hypothetical protein K12340 tolC; outer membrane protein D HL41_02845 preprotein translocase subunit SecF K12257 secDF; SecD/SecF fusion protein D HL41_05345 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HL41_01720 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D HL41_04075 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HL41_08385 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D HL41_00455 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HL41_05675 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D HL41_00680 preprotein translocase K03118 tatC; sec-independent protein translocase protein TatC D HL41_05670 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC D HL41_00635 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:tcm02020] D HL41_08345 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HL41_08340 hypothetical protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D HL41_07830 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HL41_08335 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HL41_07475 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D HL41_01740 flagellin K02406 fliC; flagellin D HL41_02590 hypothetical protein K02405 fliA; RNA polymerase sigma factor FliA D HL41_01135 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D HL41_02270 hypothetical protein K02313 dnaA; chromosomal replication initiator protein D HL41_00820 malate dehydrogenase K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D HL41_02145 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1 D HL41_02130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_03975 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_00200 hypothetical protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D HL41_02290 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D HL41_02135 ATPase AAA K02584 nifA; Nif-specific regulatory protein D HL41_03985 ATPase AAA K02584 nifA; Nif-specific regulatory protein D HL41_04685 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D HL41_07255 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D HL41_08740 histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D HL41_08735 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D HL41_01815 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D HL41_07260 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D HL41_00525 hypothetical protein K07714 atoC; two-component system, NtrC family, response regulator AtoC D HL41_02770 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D HL41_01305 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D HL41_05135 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D HL41_02555 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D HL41_02800 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_01675 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_07395 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02365 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02815 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02825 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02950 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_08730 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02980 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D HL41_02985 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HL41_02565 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HL41_02585 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HL41_02560 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HL41_05815 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HL41_02400 cytochrome D ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D HL41_02395 cytochrome C oxidase assembly protein K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D HL41_03185 hypothetical protein K12340 tolC; outer membrane protein D HL41_06315 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D HL41_09040 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:tcm02024] D HL41_07200 anthranilate synthase K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HL41_07195 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HL41_01775 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D HL41_04120 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HL41_05090 diguanylate cyclase K02033 ABC.PE.P; peptide/nickel transport system permease protein D HL41_05095 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HL41_02255 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HL41_04075 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HL41_02845 preprotein translocase subunit SecF K12257 secDF; SecD/SecF fusion protein D HL41_05345 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HL41_01720 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D HL41_08385 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D HL41_00455 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:tcm02030] D HL41_02800 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_01675 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_07395 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02365 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02815 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02825 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02950 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_08730 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02985 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HL41_02980 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D HL41_02565 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HL41_02585 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HL41_02560 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HL41_02555 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D HL41_00550 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HL41_02640 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D HL41_02635 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HL41_01135 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA C 02040 Flagellar assembly [PATH:tcm02040] D HL41_00540 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D HL41_00545 hypothetical protein K02409 fliF; flagellar M-ring protein FliF D HL41_00550 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HL41_00555 hypothetical protein K02411 fliH; flagellar assembly protein FliH D HL41_00560 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HL41_00565 hypothetical protein K02413 fliJ; flagellar protein FliJ D HL41_06085 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D HL41_02645 hypothetical protein K02415 fliL; flagellar protein FliL D HL41_02640 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D HL41_02635 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HL41_02630 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D HL41_02625 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D HL41_02620 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HL41_02615 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR D HL41_02605 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HL41_02610 hypothetical protein K02401 flhB; flagellar biosynthesis protein FlhB D HL41_00970 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D HL41_00530 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D HL41_00535 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D HL41_06080 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D HL41_06070 hypothetical protein K02390 flgE; flagellar hook protein FlgE D HL41_06075 hypothetical protein K02390 flgE; flagellar hook protein FlgE D HL41_00960 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D HL41_00965 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D HL41_00980 flgI; flagellar basal body P-ring biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D HL41_00985 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D HL41_00995 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D HL41_01000 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D HL41_01740 flagellin K02406 fliC; flagellin D HL41_04010 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D HL41_04015 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS D HL41_01135 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D HL41_09040 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D HL41_01870 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D HL41_04220 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor D HL41_02770 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D HL41_02590 hypothetical protein K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D HL41_06595 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:tcm01501] D HL41_05800 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HL41_06800 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D HL41_01765 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D HL41_01770 RND transporter K18138 acrB; multidrug efflux pump D HL41_01775 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D HL41_03185 hypothetical protein K12340 tolC; outer membrane protein C 01502 Vancomycin resistance [PATH:tcm01502] D HL41_01370 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HL41_04810 hypothetical protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HL41_04805 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:tcm01503] D HL41_07475 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D HL41_01765 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D HL41_01770 RND transporter K18138 acrB; multidrug efflux pump D HL41_03185 hypothetical protein K12340 tolC; outer membrane protein D HL41_04975 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:tcm01000] C 01001 Protein kinases [BR:tcm01001] D HL41_08345 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HL41_00200 hypothetical protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D HL41_04685 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D HL41_07255 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D HL41_08740 histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D HL41_02065 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D HL41_08235 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D HL41_02985 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:tcm01009] D HL41_04740 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D HL41_03665 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 01002 Peptidases and inhibitors [BR:tcm01002] D HL41_01845 hypothetical protein K03101 lspA; signal peptidase II [EC:3.4.23.36] D HL41_00195 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HL41_00035 hypothetical protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D HL41_00750 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HL41_03610 glutamine amidotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HL41_00360 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D HL41_00465 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D HL41_07700 hypothetical protein K07263 pqqL; zinc protease [EC:3.4.24.-] D HL41_09025 hypothetical protein K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D HL41_05335 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HL41_07220 Xaa-Pro dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D HL41_02035 hypothetical protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D HL41_04425 protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D HL41_05080 hypothetical protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D HL41_03725 hypothetical protein K06974 amzA; archaemetzincin [EC:3.4.-.-] D HL41_07475 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D HL41_09175 hypothetical protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D HL41_05285 hypothetical protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HL41_05275 DNA-binding protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D HL41_04640 peptidase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D HL41_06890 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D HL41_03035 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D HL41_04480 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D HL41_06675 peptidase K04773 sppA; protease IV [EC:3.4.21.-] D HL41_02780 peptidase S54 K07059 K07059; rhomboid family protein D HL41_02020 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D HL41_09070 peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] C 01003 Glycosyltransferases [BR:tcm01003] D HL41_06740 hypothetical protein K16150 K16150; glycogen synthase [EC:2.4.1.11] C 01005 Lipopolysaccharide biosynthesis proteins [BR:tcm01005] D HL41_04975 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D HL41_04960 hypothetical protein K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D HL41_03440 hypothetical protein K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D HL41_04970 hypothetical protein K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D HL41_04545 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D HL41_02660 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D HL41_03485 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D HL41_03140 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D HL41_03480 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D HL41_09135 arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D HL41_09035 glycerol-3-phosphate cytidylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D HL41_04435 hypothetical protein K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D HL41_06260 hypothetical protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D HL41_02300 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D HL41_04440 D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D HL41_02925 ADP-L-glycero-D-manno-heptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:tcm01011] D HL41_06640 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HL41_04790 hypothetical protein K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HL41_04815 hypothetical protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HL41_01370 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HL41_08190 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D HL41_02020 hypothetical protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D HL41_04805 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HL41_06335 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D HL41_09175 hypothetical protein K21469 pbp4b; serine-type D-Ala-D-Ala carboxypeptidase [EC:3.4.16.4] D HL41_00465 hypothetical protein K21470 ycbB; L,D-transpeptidase YcbB D HL41_02345 hypothetical protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] C 01004 Lipid biosynthesis proteins [BR:tcm01004] D HL41_00775 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HL41_00170 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HL41_05755 3-oxoacyl-ACP synthase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HL41_04980 3-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HL41_03375 acyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_01550 3-hydroxypropionyl-CoA synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HL41_07315 acyl-CoA synthetase K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D HL41_01590 hypothetical protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] C 01008 Polyketide biosynthesis proteins [BR:tcm01008] D HL41_07275 (S)-2-hydroxy-acid oxidase K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46] C 01006 Prenyltransferases [BR:tcm01006] D HL41_01275 hypothetical protein K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D HL41_08900 hypothetical protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D HL41_01355 UDP pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HL41_05170 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HL41_05160 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:tcm01007] D HL41_03130 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HL41_03635 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HL41_03690 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HL41_05600 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HL41_07435 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HL41_01185 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HL41_00415 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HL41_01850 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HL41_03240 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HL41_04265 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HL41_00935 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HL41_01230 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HL41_07205 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HL41_00865 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HL41_00860 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HL41_00240 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HL41_08530 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HL41_03425 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HL41_04725 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HL41_05965 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HL41_05960 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HL41_04290 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HL41_01730 aspartate aminotransferase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1] D HL41_01015 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D HL41_07175 aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D HL41_02880 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D HL41_08200 acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D HL41_00480 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D HL41_03820 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HL41_03270 aminotransferase DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:tcm00194] D HL41_05820 hypothetical protein K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6] D HL41_01100 atpC; ATP synthase F0F1 subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HL41_01095 ATP F0F1 synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HL41_01090 ATP F0F1 synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HL41_01085 ATP F0F1 synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HL41_01080 ATP synthase F1 subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HL41_01070 hypothetical protein K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HL41_01075 ATP synthase F0 subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HL41_00075 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HL41_00080 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HL41_00090 hypothetical protein K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:tcm03000] D HL41_02370 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HL41_07845 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HL41_00580 Fur family transcriptional regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator D HL41_00120 hypothetical protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D HL41_02515 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D HL41_03100 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HL41_08280 hypothetical protein K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HL41_02135 ATPase AAA K02584 nifA; Nif-specific regulatory protein D HL41_03985 ATPase AAA K02584 nifA; Nif-specific regulatory protein D HL41_03370 nickel-responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D HL41_04765 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HL41_02430 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HL41_04105 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HL41_06720 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D HL41_05030 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D HL41_04575 ATPase K07738 nrdR; transcriptional repressor NrdR D HL41_04835 MraZ family transcriptional regulator K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:tcm03021] D HL41_05305 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HL41_09000 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HL41_09005 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HL41_05015 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HL41_01870 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D HL41_04220 hypothetical protein K03086 rpoD; RNA polymerase primary sigma factor D HL41_02770 hypothetical protein K03092 rpoN; RNA polymerase sigma-54 factor D HL41_02590 hypothetical protein K02405 fliA; RNA polymerase sigma factor FliA D HL41_02050 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D HL41_03595 nitrogen utilization protein B K03625 nusB; transcription antitermination protein NusB D HL41_08975 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D HL41_05030 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D HL41_04950 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D HL41_05240 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:tcm03019] D HL41_04445 ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] D HL41_02350 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D HL41_01520 ribonuclease K18682 rny; ribonucrease Y [EC:3.1.-.-] D HL41_03380 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D HL41_03730 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HL41_06595 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HL41_05240 transcription termination factor Rho K03628 rho; transcription termination factor Rho D HL41_03665 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D HL41_01160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HL41_04625 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HL41_05295 hypothetical protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D HL41_03570 hypothetical protein K06958 rapZ; RNase adapter protein RapZ C 03041 Spliceosome C 03011 Ribosome [BR:tcm03011] D HL41_06680 hypothetical protein K02945 RP-S1; small subunit ribosomal protein S1 D HL41_01335 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D HL41_05415 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D HL41_05310 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D HL41_05360 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D HL41_08845 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D HL41_05465 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D HL41_05375 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D HL41_05625 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D HL41_05450 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D HL41_05315 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D HL41_05470 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D HL41_05320 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D HL41_05380 hypothetical protein K02954 RP-S14; small subunit ribosomal protein S14 D HL41_09010 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D HL41_00450 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D HL41_05400 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D HL41_08850 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D HL41_05425 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D HL41_03120 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D HL41_04235 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D HL41_08985 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D HL41_05430 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D HL41_05445 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D HL41_05440 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D HL41_05385 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D HL41_05370 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D HL41_08855 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D HL41_08990 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D HL41_08980 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D HL41_08995 50S ribosomal protein L7 K02935 RP-L7; large subunit ribosomal protein L7/L12 D HL41_05630 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D HL41_05395 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D HL41_05350 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D HL41_05410 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D HL41_05365 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D HL41_01440 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D HL41_05970 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D HL41_01580 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D HL41_05420 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D HL41_05435 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D HL41_05390 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D HL41_01585 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D HL41_01290 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D HL41_05405 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D HL41_05355 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D HL41_08060 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D HL41_00765 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D HL41_08960 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D HL41_04060 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D HL41_05975 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D HL41_05325 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D HL41_00735 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D HL41_06835 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HL41_06855 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HL41_06840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:tcm03009] D HL41_02350 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D HL41_02360 GTPase Era K03595 era; GTPase D HL41_05030 conjugal transfer protein TraR K06204 dksA; RNA polymerase-binding transcription factor D HL41_02050 transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D HL41_03595 nitrogen utilization protein B K03625 nusB; transcription antitermination protein NusB D HL41_08975 antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D HL41_05050 hypothetical protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D HL41_05740 16S rRNA methyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D HL41_08030 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D HL41_08885 hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D HL41_04830 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D HL41_08355 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D HL41_06520 hypothetical protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D HL41_00915 hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D HL41_02720 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D HL41_04935 50S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D HL41_00100 hypothetical protein K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D HL41_02995 RNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D HL41_05880 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HL41_03575 hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D HL41_07920 hypothetical protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D HL41_00440 hypothetical protein K02860 rimM; 16S rRNA processing protein RimM D HL41_09060 hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D HL41_02030 hypothetical protein K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D HL41_04445 ribonuclease K08301 rng; ribonuclease G [EC:3.1.26.-] D HL41_03730 RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HL41_01125 GTPase EngA K03977 engA; GTPase D HL41_03625 GTP-binding protein HflX K03665 hflX; GTPase D HL41_00660 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HL41_01285 GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HL41_02055 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D HL41_03620 hypothetical protein K09710 ybeB; ribosome-associated protein D HL41_06730 GTP-binding protein K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:tcm03016] D HL41_04160 hypothetical protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D HL41_09115 tRNA-splicing ligase K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D HL41_01120 hypothetical protein K24956 ZBTB8OS; protein archease D HL41_03130 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HL41_08530 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HL41_01850 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HL41_04265 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HL41_00415 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HL41_01185 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HL41_00935 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HL41_01230 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HL41_04725 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HL41_03425 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HL41_00240 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HL41_05600 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HL41_07435 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HL41_03240 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HL41_07205 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HL41_05965 pheS; phenylalanine--tRNA ligase K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HL41_05960 hypothetical protein K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HL41_03635 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HL41_03690 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HL41_04350 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D HL41_00420 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HL41_00830 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D HL41_00815 methyltransferase K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D HL41_05615 pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D HL41_06255 pseudouridine synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D HL41_06805 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HL41_00660 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D HL41_05170 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HL41_04085 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D HL41_01855 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HL41_09245 bacterial RNase P K01978 rnpB; M1 RNA D HL41_04255 hypothetical protein K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D HL41_02675 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D HL41_05210 hypothetical protein K01147 rnb; exoribonuclease II [EC:3.1.13.1] D HL41_04130 hypothetical protein K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D HL41_01865 hypothetical protein K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D HL41_00865 glycyl-tRNA synthetase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HL41_00860 hypothetical protein K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HL41_03460 adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D HL41_04670 dimethylallyladenosine tRNA methylthiotransferase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D HL41_07925 hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5] D HL41_00105 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D HL41_01715 gid; tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D HL41_00435 hypothetical protein K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D HL41_04580 RNA methyltransferase K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-] D HL41_07605 hypothetical protein K03437 spoU; RNA methyltransferase, TrmH family D HL41_01880 hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HL41_03015 hypothetical protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D HL41_03770 preprotein translocase subunit TatB K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D HL41_00485 S-adenosylmethionine tRNA ribosyltransferase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D HL41_00590 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HL41_03300 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D HL41_03305 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D HL41_03680 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D HL41_08145 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D HL41_01725 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D HL41_01605 hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D HL41_05085 hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D HL41_02295 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D HL41_07695 hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D HL41_03380 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] C 03012 Translation factors [BR:tcm03012] D HL41_03145 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HL41_03420 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HL41_01340 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D HL41_08955 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HL41_05455 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HL41_05460 fusA; elongation factor G K02355 fusA; elongation factor G D HL41_03735 hypothetical protein K02355 fusA; elongation factor G D HL41_00855 translation elongation factor K03833 selB; selenocysteine-specific elongation factor D HL41_08065 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D HL41_01350 ribosome recycling factor K02838 frr; ribosome recycling factor D HL41_06645 hypothetical protein K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D HL41_00740 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D HL41_05330 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D HL41_00375 elongation factor P K02356 efp; elongation factor P C 03110 Chaperones and folding catalysts [BR:tcm03110] D HL41_03560 protein disaggregation chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D HL41_05280 ATP-dependent protease K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D HL41_09065 ATP-dependent protease K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D HL41_01160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HL41_04625 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HL41_05020 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HL41_02550 hypothetical protein K03686 dnaJ; molecular chaperone DnaJ D HL41_05510 integrase K05516 cbpA; curved DNA-binding protein D HL41_09165 heat shock protein Hsp33 K04083 hslO; molecular chaperone Hsp33 D HL41_01155 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D HL41_03555 molecular chaperone K13993 HSP20; HSP20 family protein D HL41_04630 molecular chaperone GroES K04078 groES; chaperonin GroES D HL41_07475 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D HL41_00080 ATP synthase F0 subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HL41_08765 hydrogenase nickel incorporation protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D HL41_08755 hydrogenase K04652 hypB; hydrogenase nickel incorporation protein HypB D HL41_03110 hypothetical protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D HL41_02250 hypothetical protein K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D HL41_07485 hypothetical protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D HL41_06235 thioredoxin K03671 TXN; thioredoxin D HL41_05530 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D HL41_05555 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] C 04131 Membrane trafficking [BR:tcm04131] D HL41_03545 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HL41_03590 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HL41_02420 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:tcm03032] D HL41_02945 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HL41_00695 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HL41_02270 hypothetical protein K02313 dnaA; chromosomal replication initiator protein D HL41_08860 DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HL41_06560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HL41_08020 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HL41_02010 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HL41_02425 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HL41_01445 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HL41_03685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HL41_07185 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HL41_02005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HL41_06810 topoisomerase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:tcm03036] D HL41_02350 hypothetical protein K03685 rnc; ribonuclease III [EC:3.1.26.3] D HL41_00695 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HL41_05510 integrase K05516 cbpA; curved DNA-binding protein D HL41_02270 hypothetical protein K02313 dnaA; chromosomal replication initiator protein D HL41_03230 hypothetical protein K03529 smc; chromosome segregation protein D HL41_06150 hypothetical protein K05896 scpA; segregation and condensation protein A D HL41_01320 hypothetical protein K06024 scpB; segregation and condensation protein B D HL41_04775 hypothetical protein K03590 ftsA; cell division protein FtsA D HL41_06175 hypothetical protein K13052 divIC; cell division protein DivIC D HL41_05700 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D HL41_04780 hypothetical protein K03589 ftsQ; cell division protein FtsQ D HL41_04770 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HL41_01510 hypothetical protein K09888 zapA; cell division protein ZapA D HL41_01765 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D HL41_07160 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D HL41_01050 hypothetical protein K03570 mreC; rod shape-determining protein MreC D HL41_01065 hypothetical protein K05837 rodA; rod shape determining protein RodA D HL41_05155 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D HL41_04765 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HL41_02430 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HL41_04105 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HL41_01855 tRNA uridine 5-carboxymethylaminomethyl modification protein K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HL41_01715 gid; tRNA (uracil-5-)-methyltransferase K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74] D HL41_00345 hypothetical protein K03733 xerC; integrase/recombinase XerC D HL41_04165 recombinase XerD K04763 xerD; integrase/recombinase XerD D HL41_03995 chromosome partitioning protein ParA K03593 mrp; ATP-binding protein involved in chromosome partitioning D HL41_08495 ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:tcm03400] D HL41_04715 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HL41_08835 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D HL41_03405 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HL41_00850 hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HL41_00705 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D HL41_06010 hypothetical protein K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HL41_06460 hypothetical protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HL41_03685 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HL41_05035 hypothetical protein K03701 uvrA; excinuclease ABC subunit A D HL41_01985 hypothetical protein K03701 uvrA; excinuclease ABC subunit A D HL41_08035 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D HL41_01875 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HL41_09000 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D HL41_09005 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D HL41_05305 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HL41_05015 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HL41_06500 hypothetical protein K03555 mutS; DNA mismatch repair protein MutS D HL41_04230 hypothetical protein K07456 mutS2; DNA mismatch repair protein MutS2 D HL41_05175 hypothetical protein K03572 mutL; DNA mismatch repair protein MutL D HL41_01265 hypothetical protein K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HL41_08020 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HL41_02010 hypothetical protein K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HL41_02425 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HL41_06560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HL41_06585 recombinase RecA K03553 recA; recombination protein RecA D HL41_05835 hypothetical protein K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HL41_01915 hypothetical protein K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D HL41_06195 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 D HL41_08160 hypothetical protein K03547 sbcD; DNA repair protein SbcD/Mre11 D HL41_03520 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D HL41_04695 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HL41_07465 hypothetical protein K03584 recO; DNA repair protein RecO (recombination protein O) D HL41_01405 recombinase RecR K06187 recR; recombination protein RecR D HL41_01790 hypothetical protein K03631 recN; DNA repair protein RecN (Recombination protein N) D HL41_08890 hypothetical protein K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] D HL41_03810 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-] D HL41_07755 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D HL41_07185 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HL41_02005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HL41_00695 DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D HL41_06890 hypothetical protein K01356 lexA; repressor LexA [EC:3.4.21.88] D HL41_01980 DNA polymerase III K02347 polX; DNA polymerase (family X) D HL41_03160 hypothetical protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:tcm03029] D HL41_05815 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HL41_03145 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D HL41_03420 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D HL41_01340 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D HL41_08955 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HL41_05455 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HL41_05460 fusA; elongation factor G K02355 fusA; elongation factor G D HL41_03735 hypothetical protein K02355 fusA; elongation factor G D HL41_02360 GTPase Era K03595 era; GTPase D HL41_03635 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HL41_04265 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HL41_01230 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HL41_01185 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HL41_04100 gatA; glutamyl-tRNA amidotransferase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HL41_03390 glutamyl-tRNA amidotransferase K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HL41_04095 gatC; glutamyl-tRNA amidotransferase K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HL41_06560 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D HL41_00950 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family D HL41_01160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HL41_01155 molecular chaperone GrpE K03687 GRPE; molecular chaperone GrpE D HL41_04625 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HL41_04630 molecular chaperone GroES K04078 groES; chaperonin GroES D HL41_05020 molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D HL41_02550 hypothetical protein K03686 dnaJ; molecular chaperone DnaJ D HL41_06805 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HL41_03995 chromosome partitioning protein ParA K03593 mrp; ATP-binding protein involved in chromosome partitioning D HL41_04075 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:tcm02000] D HL41_04430 hypothetical protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D HL41_04540 tungsten ABC transporter substrate-binding protein K05772 tupA; tungstate transport system substrate-binding protein D HL41_04535 tungstate transporter permease K05773 tupB; tungstate transport system permease protein D HL41_04530 sugar ABC transporter ATPase K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6] D HL41_04990 mammalian cell entry protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HL41_05000 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HL41_04995 ABC transporter K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HL41_07830 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HL41_08335 phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D HL41_08330 pstC; phosphate transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D HL41_08320 hypothetical protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D HL41_04120 peptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D HL41_05090 diguanylate cyclase K02033 ABC.PE.P; peptide/nickel transport system permease protein D HL41_05095 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D HL41_02255 peptide ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D HL41_09085 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D HL41_09090 iron transporter K02015 ABC.FEV.P; iron complex transport system permease protein D HL41_09095 ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D HL41_02850 hypothetical protein K09815 znuA; zinc transport system substrate-binding protein D HL41_01240 hypothetical protein K09816 znuB; zinc transport system permease protein D HL41_01245 hypothetical protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D HL41_02495 cobalt ABC transporter permease K02008 cbiQ; cobalt/nickel transport system permease protein D HL41_02485 cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein D HL41_02500 cobalt ABC transporter ATPase K02006 cbiO; cobalt/nickel transport system ATP-binding protein D HL41_08875 hypothetical protein K10094 cbiK; nickel transport protein D HL41_02185 hypothetical protein K10094 cbiK; nickel transport protein D HL41_02480 membrane protein K10094 cbiK; nickel transport protein D HL41_02490 hypothetical protein K16915 cbiL; nickel transport protein D HL41_00155 hypothetical protein K07091 lptF; lipopolysaccharide export system permease protein D HL41_00160 hypothetical protein K11720 lptG; lipopolysaccharide export system permease protein D HL41_02765 ABC transporter K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HL41_06535 multidrug ABC transporter ATPase K25181 ybhS; drug efflux transport system permease protein D HL41_06530 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein D HL41_06525 secretion protein HylD K25183 ybhG; membrane fusion protein YbhG D HL41_00940 hypothetical protein K09808 lolC_E; lipoprotein-releasing system permease protein D HL41_00945 hypothetical protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D HL41_05700 hypothetical protein K09812 ftsE; cell division transport system ATP-binding protein D HL41_03045 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein D HL41_06540 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HL41_04495 ABC transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D HL41_03050 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HL41_04500 ABC transporter K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HL41_03200 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D HL41_03205 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein D HL41_03195 macrolide ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HL41_02870 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D HL41_08260 transporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D HL41_05800 hypothetical protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D HL41_04150 potassium transporter TrkA K10716 kch; voltage-gated potassium channel D HL41_02150 ammonia channel protein K03320 amt; ammonium transporter, Amt family D HL41_01135 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D HL41_00220 energy transducer TonB K03561 exbB; biopolymer transport protein ExbB D HL41_00225 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD D HL41_06230 hypothetical protein K03562 tolQ; biopolymer transport protein TolQ D HL41_04300 biopolymer transporter TolR K03560 tolR; biopolymer transport protein TolR D HL41_06655 magnesium transporter K03284 corA; magnesium transporter D HL41_03330 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HL41_03335 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HL41_03845 hypothetical protein K06076 fadL; long-chain fatty acid transport protein D HL41_08350 hypothetical protein K16092 btuB; vitamin B12 transporter D HL41_06060 hypothetical protein K16092 btuB; vitamin B12 transporter D HL41_03185 hypothetical protein K12340 tolC; outer membrane protein D HL41_01775 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D HL41_00950 hypothetical protein K07277 SAM50; outer membrane protein insertion porin family D HL41_08605 hypothetical protein K04744 lptD; LPS-assembly protein D HL41_02930 hypothetical protein K06189 corC; hemolysin (HlyC) family protein D HL41_02285 dihydroorotate dehydrogenase K07238 TC.ZIP; zinc transporter, ZIP family D HL41_01770 RND transporter K18138 acrB; multidrug efflux pump D HL41_04490 hypothetical protein K08978 TC.BAT1; bacterial/archaeal transporter family protein D HL41_07305 lactate permease K03303 lutP; lactate permease D HL41_02920 lactate permease K03303 lutP; lactate permease D HL41_02450 sodium:calcium antiporter K07301 yrbG; cation:H+ antiporter D HL41_08485 acetate permease K14393 actP; cation/acetate symporter D HL41_08140 sodium:proton antiporter K26730 napA; Na+:H+ antiporter D HL41_05195 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease D HL41_02165 transporter K07240 chrA; chromate transporter D HL41_07360 hypothetical protein K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D HL41_08700 monovalent cation/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D HL41_08715 cation:proton antiporter K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D HL41_07365 hypothetical protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D HL41_06335 virulence factor MVIN family protein K03980 murJ; putative peptidoglycan lipid II flippase D HL41_08535 potassium transporter Kup K03549 kup; KUP system potassium uptake protein D HL41_08800 hypothetical protein K23675 fmnP; riboflavin transporter D HL41_04295 hypothetical protein K03646 tolA; colicin import membrane protein D HL41_01005 hypothetical protein K03641 tolB; TolB protein D HL41_08650 thiosulfate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D HL41_04470 nitrate reductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5] D HL41_01765 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D HL41_06030 FeoA family protein K04758 feoA; ferrous iron transport protein A D HL41_06045 hypothetical protein K04758 feoA; ferrous iron transport protein A D HL41_06025 iron transporter FeoB K04759 feoB; ferrous iron transport protein B D HL41_07215 iron transporter FeoB K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:tcm02044] D HL41_03185 hypothetical protein K12340 tolC; outer membrane protein D HL41_00195 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HL41_01305 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D HL41_06660 pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D HL41_01690 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM D HL41_01700 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D HL41_01710 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ D HL41_01895 twitching motility protein K02669 pilT; twitching motility protein PilT D HL41_01900 twitching motility protein K02669 pilT; twitching motility protein PilT D HL41_04595 hypothetical protein K02221 yggT; YggT family protein D HL41_05505 CMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12] D HL41_01115 hypothetical protein K02238 comEC; competence protein ComEC D HL41_02605 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HL41_02610 hypothetical protein K02401 flhB; flagellar biosynthesis protein FlhB D HL41_04315 hypothetical protein K04061 flhB2; flagellar biosynthesis protein D HL41_00545 hypothetical protein K02409 fliF; flagellar M-ring protein FliF D HL41_00555 hypothetical protein K02411 fliH; flagellar assembly protein FliH D HL41_00560 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HL41_02635 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HL41_02630 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D HL41_02625 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D HL41_02620 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HL41_02615 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR D HL41_05530 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D HL41_05555 hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D HL41_03930 hypothetical protein K04337 csgE; curli production assembly/transport component CsgE D HL41_03925 hypothetical protein K04338 csgF; curli production assembly/transport component CsgF D HL41_02845 preprotein translocase subunit SecF K12257 secDF; SecD/SecF fusion protein D HL41_05345 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D HL41_00455 signal recognition particle K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HL41_08385 cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor D HL41_01720 hypothetical protein K03210 yajC; preprotein translocase subunit YajC D HL41_04075 hypothetical protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HL41_05675 preprotein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D HL41_00680 preprotein translocase K03118 tatC; sec-independent protein translocase protein TatC D HL41_05670 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC D HL41_00635 hypothetical protein K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:tcm02042] D HL41_03330 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HL41_03335 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:tcm02022] D HL41_08345 hypothetical protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D HL41_08340 hypothetical protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D HL41_08240 histidine kinase K02483 K02483; two-component system, OmpR family, response regulator D HL41_00200 hypothetical protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D HL41_02290 Fis family transcriptional regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D HL41_04685 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D HL41_07255 hypothetical protein K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D HL41_08740 histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D HL41_08735 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D HL41_01815 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D HL41_07260 Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D HL41_00525 hypothetical protein K07714 atoC; two-component system, NtrC family, response regulator AtoC D HL41_02065 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D HL41_08235 hypothetical protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D HL41_02985 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HL41_02565 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HL41_02585 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HL41_02560 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] C 02035 Bacterial motility proteins [BR:tcm02035] D HL41_02985 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HL41_02980 hypothetical protein K03408 cheW; purine-binding chemotaxis protein CheW D HL41_02555 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D HL41_02560 chemotaxis protein CheY K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D HL41_02565 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HL41_02585 histidine kinase K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HL41_02800 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_01675 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_07395 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02365 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02815 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02825 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_02950 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_08730 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein D HL41_00555 hypothetical protein K02411 fliH; flagellar assembly protein FliH D HL41_00560 fliI; ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HL41_00565 hypothetical protein K02413 fliJ; flagellar protein FliJ D HL41_02630 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ D HL41_02625 flagellar biosynthesis protein flip K02419 fliP; flagellar biosynthesis protein FliP D HL41_02620 flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D HL41_02615 hypothetical protein K02421 fliR; flagellar biosynthesis protein FliR D HL41_02605 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D HL41_02610 hypothetical protein K02401 flhB; flagellar biosynthesis protein FlhB D HL41_00550 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D HL41_02640 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D HL41_02635 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D HL41_00545 hypothetical protein K02409 fliF; flagellar M-ring protein FliF D HL41_00980 flgI; flagellar basal body P-ring biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D HL41_00970 hypothetical protein K02386 flgA; flagellar basal body P-ring formation protein FlgA D HL41_02645 hypothetical protein K02415 fliL; flagellar protein FliL D HL41_00540 hypothetical protein K02408 fliE; flagellar hook-basal body complex protein FliE D HL41_06085 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK D HL41_00530 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D HL41_00535 flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D HL41_06080 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD D HL41_00960 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D HL41_00965 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D HL41_00985 hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ D HL41_06070 hypothetical protein K02390 flgE; flagellar hook protein FlgE D HL41_06075 hypothetical protein K02390 flgE; flagellar hook protein FlgE D HL41_00995 hypothetical protein K02396 flgK; flagellar hook-associated protein 1 D HL41_01000 hypothetical protein K02397 flgL; flagellar hook-associated protein 3 FlgL D HL41_01740 flagellin K02406 fliC; flagellin D HL41_04010 hypothetical protein K02407 fliD; flagellar hook-associated protein 2 D HL41_04015 flagellar biosynthesis protein FliS K02422 fliS; flagellar secretion chaperone FliS D HL41_02590 hypothetical protein K02405 fliA; RNA polymerase sigma factor FliA D HL41_01135 flagellar motor protein MotA K02556 motA; chemotaxis protein MotA D HL41_09040 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D HL41_02600 hypothetical protein K02404 flhF; flagellar biosynthesis protein FlhF D HL41_02595 hypothetical protein K04562 flhG; flagellar biosynthesis protein FlhG D HL41_01895 twitching motility protein K02669 pilT; twitching motility protein PilT D HL41_01900 twitching motility protein K02669 pilT; twitching motility protein PilT D HL41_01305 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA D HL41_06660 pilus assembly protein PilC K02653 pilC; type IV pilus assembly protein PilC D HL41_00195 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D HL41_01710 hypothetical protein K02666 pilQ; type IV pilus assembly protein PilQ D HL41_01700 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO D HL41_01690 hypothetical protein K02662 pilM; type IV pilus assembly protein PilM C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:tcm04812] D HL41_03135 hypothetical protein K06990 MEMO1; MEMO1 family protein D HL41_04760 hypothetical protein K06990 MEMO1; MEMO1 family protein D HL41_07160 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D HL41_04770 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HL41_04775 hypothetical protein K03590 ftsA; cell division protein FtsA D HL41_05155 chromosome partitioning protein ParA K03496 parA; chromosome partitioning protein D HL41_04765 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HL41_02430 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HL41_04105 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:tcm04147] D HL41_06595 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HL41_03590 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HL41_06165 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HL41_02420 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D HL41_06050 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D HL41_04625 groEL; molecular chaperone GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HL41_01160 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D HL41_02335 phosphoheptose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HL41_06665 inosine-5-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HL41_08955 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HL41_05455 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D HL41_00420 HIT family hydrolase K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HL41_04740 S-adenosyl-L-homocysteine hydrolase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D HL41_05340 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D HL41_00605 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D HL41_03500 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D HL41_02130 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_03975 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HL41_02340 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HL41_04940 3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HL41_04955 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HL41_01940 IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D HL41_02035 hypothetical protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D HL41_01220 hypothetical protein K03522 fixB; electron transfer flavoprotein alpha subunit D HL41_06160 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:tcm02048] D HL41_07755 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1 D HL41_07760 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2 D HL41_07715 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D HL41_07730 hypothetical protein K19075 cst2; CRISPR-associated protein Cst2 D HL41_07750 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D HL41_07710 hypothetical protein K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D HL41_03605 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] D HL41_06375 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D HL41_04770 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D HL41_07160 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D HL41_03130 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HL41_06805 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:tcm01504] D HL41_01765 hypothetical protein K03585 acrA; membrane fusion protein, multidrug efflux system D HL41_01770 RND transporter K18138 acrB; multidrug efflux pump D HL41_01775 hypothetical protein K18139 oprM; outer membrane protein, multidrug efflux system D HL41_03185 hypothetical protein K12340 tolC; outer membrane protein C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:tcm03100] D HL41_03115 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HL41_06845 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HL41_02905 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HL41_07495 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HL41_04000 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HL41_04410 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HL41_05235 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HL41_02330 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HL41_03295 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HL41_06620 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HL41_06405 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HL41_02865 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HL41_02195 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D HL41_08945 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HL41_02060 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HL41_02215 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HL41_01435 tRNA-His K14226 tRNA-His; tRNA His D HL41_06850 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HL41_04510 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_05100 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_08805 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_05845 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_01785 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HL41_02200 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HL41_07945 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D HL41_00365 tRNA-Met K14230 tRNA-Met; tRNA Met D HL41_00675 tRNA-Met K14230 tRNA-Met; tRNA Met D HL41_03285 tRNA-Met K14230 tRNA-Met; tRNA Met D HL41_00110 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HL41_06770 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HL41_02890 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HL41_04875 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HL41_08285 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HL41_08390 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HL41_06615 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HL41_02650 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HL41_08950 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HL41_08370 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HL41_06610 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HL41_08965 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HL41_08940 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HL41_03430 tRNA-Val K14237 tRNA-Val; tRNA Val D HL41_00055 tRNA-Val K14237 tRNA-Val; tRNA Val D HL41_08840 tRNA-Val K14237 tRNA-Val; tRNA Val D HL41_07535 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D HL41_06855 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D HL41_06840 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D HL41_06835 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D HL41_09245 bacterial RNase P K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D HL41_07600 pyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D HL41_00595 hypothetical protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HL41_05945 desulfoferrodoxin K05919 dfx; superoxide reductase [EC:1.15.1.2] D HL41_08025 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D HL41_07995 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D HL41_04930 radical SAM protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HL41_07240 ribonucleoside-triphosphate reductase K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HL41_04180 radical SAM protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D HL41_07375 hypothetical protein K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-] D HL41_03005 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D HL41_02935 hypothetical protein K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D HL41_07905 hypothetical protein K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D HL41_00370 hypothetical protein K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D HL41_04710 diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D HL41_02745 membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D HL41_02790 Appr-1-p processing protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D HL41_06725 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HL41_00280 phosphoesterase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D HL41_01235 hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D HL41_01530 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D HL41_00505 ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D HL41_00185 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D HL41_03780 sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D HL41_03755 activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9] D HL41_04660 hypothetical protein K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D HL41_06580 ATPase K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10] C 99981 Carbohydrate metabolism D HL41_02700 hypothetical protein K06206 sfsA; sugar fermentation stimulation protein A D HL41_06820 hypothetical protein K04767 acuB; acetoin utilization protein AcuB D HL41_05060 signal transduction protein K04767 acuB; acetoin utilization protein AcuB D HL41_07290 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D HL41_04270 hypothetical protein K05337 fer; ferredoxin D HL41_08925 heterodisulfide reductase subunit A K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA D HL41_08930 heterodisulfide reductase subunit A K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB D HL41_08935 hypothetical protein K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC D HL41_07350 hypothetical protein K14090 echE; ech hydrogenase subunit E D HL41_02725 4Fe-4S ferredoxin K02574 napH; ferredoxin-type protein NapH D HL41_01215 hypothetical protein K03521 fixA; electron transfer flavoprotein beta subunit D HL41_04460 hypothetical protein K04015 nrfD; protein NrfD D HL41_01200 sulfite reductase K23077 dsrC; dissimilatory sulfite reductase related protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D HL41_01110 pyridoxal phosphate biosynthesis protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D HL41_09170 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A D HL41_03170 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D HL41_00330 cold-shock protein K03704 cspA; cold shock protein D HL41_00905 hypothetical protein K09777 remA; extracellular matrix regulatory protein A C 99974 Translation D HL41_04250 beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D HL41_05290 trigger factor K03545 tig; trigger factor D HL41_08575 formate dehydrogenase K02380 fdhE; FdhE protein D HL41_06190 SsrA-binding protein K03664 smpB; SsrA-binding protein D HL41_05145 hydrogenase assembly protein HupF K04653 hypC; hydrogenase expression/formation protein HypC D HL41_05140 hydrogenase formation protein HupD K04654 hypD; hydrogenase expression/formation protein HypD D HL41_08760 hydrogenase assembly protein HupF K04655 hypE; hydrogenase expression/formation protein HypE D HL41_08770 transcriptional regulator K04656 hypF; hydrogenase maturation protein HypF D HL41_00070 magnesium chelatase K07391 comM; magnesium chelatase family protein D HL41_04475 hypothetical protein K07399 resB; cytochrome c biogenesis protein D HL41_00845 serine protease K07403 nfeD; membrane-bound serine protease (ClpP class) C 99976 Replication and repair D HL41_03905 DNA methylase K07445 K07445; putative DNA methylase D HL41_03470 hypothetical protein K03630 radC; DNA repair protein RadC D HL41_07430 endonuclease K07457 K07457; endonuclease III related protein D HL41_01450 hypothetical protein K07460 yraN; putative endonuclease D HL41_01415 hypothetical protein K04096 smf; DNA processing protein D HL41_05475 ATPase AAA K07478 ycaJ; putative ATPase D HL41_04700 transposase K07486 K07486; transposase D HL41_04730 transposase K07486 K07486; transposase D HL41_07580 hypothetical protein K07493 K07493; putative transposase D HL41_08105 hypothetical protein K07493 K07493; putative transposase D HL41_08415 hypothetical protein K07493 K07493; putative transposase D HL41_02810 hypothetical protein K07493 K07493; putative transposase D HL41_08825 hypothetical protein K07493 K07493; putative transposase D HL41_03065 hypothetical protein K07493 K07493; putative transposase D HL41_03325 hypothetical protein K07493 K07493; putative transposase D HL41_09190 hypothetical protein K07493 K07493; putative transposase D HL41_03875 hypothetical protein K07493 K07493; putative transposase D HL41_04380 hypothetical protein K07493 K07493; putative transposase D HL41_05265 hypothetical protein K07493 K07493; putative transposase D HL41_05570 hypothetical protein K07493 K07493; putative transposase D HL41_06345 hypothetical protein K07493 K07493; putative transposase D HL41_06400 hypothetical protein K07493 K07493; putative transposase D HL41_06570 hypothetical protein K07493 K07493; putative transposase D HL41_06685 hypothetical protein K07493 K07493; putative transposase D HL41_06695 hypothetical protein K07493 K07493; putative transposase D HL41_06950 hypothetical protein K07493 K07493; putative transposase D HL41_07115 hypothetical protein K07493 K07493; putative transposase C 99979 Viral proteins C 99998 Others D HL41_01400 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D HL41_03180 amino acid permease K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D HL41_02180 hypothetical protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family D HL41_00040 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family C 99978 Cell growth D HL41_05595 carbon monoxide dehydrogenase K07321 cooC; CO dehydrogenase maturation factor D HL41_04080 hypothetical protein K06346 jag; spoIIIJ-associated protein C 99993 Cell motility C 99995 Signaling proteins D HL41_04600 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D HL41_08480 hypothetical protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D HL41_05110 hypothetical protein K03634 lolA; outer membrane lipoprotein carrier protein D HL41_07685 hypothetical protein K06142 hlpA; outer membrane protein D HL41_03190 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D HL41_03030 hypothetical protein K02039 phoU; phosphate transport system protein D HL41_03540 dihydroorotate dehydrogenase K03926 cutA; periplasmic divalent cation tolerance protein D HL41_01670 hypothetical protein K07216 hr; hemerythrin D HL41_08570 LysR family transcriptional regulator K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D HL41_01920 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D HL41_05605 hypothetical protein K03558 cvpA; membrane protein required for colicin V production D HL41_08815 hypothetical protein K07025 K07025; putative hydrolase of the HAD superfamily D HL41_02875 hypothetical protein K09014 sufB; Fe-S cluster assembly protein SufB D HL41_08395 hypothetical protein K07058 K07058; membrane protein D HL41_01190 hypothetical protein K03749 dedD; DedD protein C 99997 Function unknown D HL41_07865 hypothetical protein K06871 K06871; uncharacterized protein D HL41_01535 cobyrinic acid a,c-diamide synthase K06873 K06873; uncharacterized protein D HL41_07320 cobyrinic acid a,c-diamide synthase K06873 K06873; uncharacterized protein D HL41_06980 hypothetical protein K06905 D; Bacteriophage probable baseplate hub protein D HL41_07100 hypothetical protein K06907 FI; Bacteriophage tail sheath protein D HL41_07105 hypothetical protein K06908 FII; Bacteriophage tail tube protein D HL41_06155 CoA-binding protein K06929 K06929; uncharacterized protein D HL41_07280 DNA-binding protein K06934 K06934; uncharacterized protein D HL41_00585 hypothetical protein K06940 K06940; uncharacterized protein D HL41_08365 hypothetical protein K06940 K06940; uncharacterized protein D HL41_04305 hypothetical protein K06940 K06940; uncharacterized protein D HL41_05190 phosphohydrolase K06950 K06950; uncharacterized protein D HL41_01365 hypothetical protein K06950 K06950; uncharacterized protein D HL41_00445 RNA-binding protein K06960 K06960; uncharacterized protein D HL41_04635 aminoglycoside phosphotransferase K07028 K07028; uncharacterized protein D HL41_02830 hypothetical protein K07071 K07071; uncharacterized protein D HL41_07790 hypothetical protein K07075 K07075; uncharacterized protein D HL41_02510 permease K07089 K07089; uncharacterized protein D HL41_02715 permease K07090 K07090; uncharacterized protein D HL41_08300 membrane protein K07090 K07090; uncharacterized protein D HL41_08460 hypothetical protein K07090 K07090; uncharacterized protein D HL41_04210 membrane protein K07090 K07090; uncharacterized protein D HL41_08525 phosphodiesterase K07095 K07095; uncharacterized protein D HL41_01990 hypothetical protein K07112 K07112; uncharacterized protein D HL41_03765 membrane protein K07112 K07112; uncharacterized protein D HL41_02015 FAD-dependent oxidoreductase K07137 K07137; uncharacterized protein D HL41_01385 hypothetical protein K07139 K07139; uncharacterized protein D HL41_00665 hypothetical protein K07164 K07164; uncharacterized protein D HL41_04070 hypothetical protein K08998 K08998; uncharacterized protein D HL41_00930 hypothetical protein K08999 K08999; uncharacterized protein D HL41_07245 hypothetical protein K09003 K09003; uncharacterized protein D HL41_04110 hypothetical protein K09004 K09004; uncharacterized protein D HL41_01225 hypothetical protein K09122 K09122; uncharacterized protein D HL41_08180 hypothetical protein K09138 K09138; uncharacterized protein D HL41_05535 hypothetical protein K09141 K09141; uncharacterized protein D HL41_05560 hypothetical protein K09141 K09141; uncharacterized protein D HL41_04420 hypothetical protein K09147 K09147; uncharacterized protein D HL41_02355 hypothetical protein K09706 K09706; uncharacterized protein D HL41_01595 hypothetical protein K09749 K09749; uncharacterized protein D HL41_01610 hypothetical protein K09749 K09749; uncharacterized protein D HL41_03150 hypothetical protein K09764 K09764; uncharacterized protein D HL41_00395 hypothetical protein K09791 K09791; uncharacterized protein D HL41_05650 hypothetical protein K09794 K09794; uncharacterized protein D HL41_00615 hypothetical protein K09862 K09862; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 15, 2024