+F Repair protein KO #

  DNA Repair and Recombination Proteins - Thermosynechococcus vestitus

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AEukaryotic type B SSBR (single strand breaks repair) C Direct repair D tll0425 phrA; DNA photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D tll0552 ORF_ID:tll0552; similar to deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] C BER (base exicision repair) D DNA glycosylases E tll2147 N-methylpurine-DNA glycosirase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E tll1077 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E tll1641 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases D Long Patch-BER factors E DNA polymerase delta complex E DNA polymerase epsilon complex D Short Patch-BER factors D Other BER factors C NER (nucleotide excision repair) D GGR (global genome repair) factors E XPC-HR23B-CETN2 complex E Cul4-DDB2 complex E NER4 complex D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase II complex E Cul4-CSA complex E Other TCR factor D TFIIH complex D RPA (replication factor A) D Other NER factors C MMR (mismatch excision repair) D Mismatch and loop recognition factors D MutL homologs D DNA polymerase delta complex D RPA (replication factor A) D RFC (replication factor C) D Other MMR factors B DSBR (double strand breaks repair) C HR (homologous recombination) D MRN(MRX) complex D BRCA1-core complex D BRCA1-A complex D BRCA1-B complex D BRCA1-C complex D BRCA complex D RecA family proteins D Rad52 family proteins D Rad54 family proteins D RecQ family DNA helicases D Bloom's syndrome complex (BTR) D RPA (replication factor A) D Protein phosphatase 4 D AP-5 complex D SMC5-SMC6 complex D Other HR factors C NHEJ (non-homologous end-joining) D DNA-PK complex D MRX complex D DNA Ligase 4 complex D X-family DNA polymerases D Other NHEJ factors C FA (Fanconi anemia) pathway D FA core complex D FA core complex binding factors D Bloom's syndrome complex (BTR) D FANCD2-I complex D Downstream FA components D Other FA pathway factors C Other DSBR factors D Protein phosphatase 6 D Ubiquitin ligases D Others B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C B-family DNA polymerases C A-family DNA polymerase C Rad6 epistasis group C Other TLS factors B Check point factors C Rad9-Hus1-Rad1 complex C HRAD17(Rad24)-RFC complex C Rad17-Mec3-Ddc1 complex C FPC (fork protection complex) C Triple T complex C BAG6-UBL4A-GET4 complex C Other check point factors B Other factors with a suspected DNA repair function C DNA polymerases C Nucleases C Helicases C PSO4 complex C Modulation of nucleotide pools D tll1450 ORF_ID:tll1450; mutator MutT homolog K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] # AProkaryotic type B SSBR (single strand breaks repair) C Direct repair D tll0425 phrA; DNA photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D tll0552 ORF_ID:tll0552; similar to deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D tlr0700 ORF_ID:tlr0700; hypothetical protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] D tlr0701 ORF_ID:tlr0701; hypothetical protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13] C BER (base exicision repair) D DNA glycosylases E tll1956 ORF_ID:tll1956; hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] E tll2147 N-methylpurine-DNA glycosirase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21] E tll1077 adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] E tll1566 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] E tll1641 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D AP endonucleases E tlr1785 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D RecJ E tlr0174 recJ; single-strand-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E tll1243 ORF_ID:tll1243; probable single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D DNA ligase E tll0857 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D DNA polymerase I C NER (nucleotide excision repair) D GGR (global genome repair) factors E tll0184 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A E tlr2033 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B E tlr1753 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C E tlr2459 pcrA; ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E tll0312 ORF_ID:tll0312; hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E tll0857 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D TCR (transcription coupled repair) factors E DNA-directed RNA polymerase complex (RNAP) F tll0642 rpoB; RNA polymerase beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] F tll0640 rpoC2; RNA polymerase beta prime subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F tll0641 rpoC1; RNA polymerase gamma-subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] F tlr0105 rpoA; RNA polymerase alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] F tsr2257 ycf61; ORF_ID:tsr2257; probable DNA-directed RNA polymerase omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] E TRCF (transcription-repair coupling factor) F tll0952 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] C MMR (mismatch excision repair) D Mismatch and loop recognition factors E tlr2240 DNA mismatch repair protein K03555 mutS; DNA mismatch repair protein MutS E tlr2472 mutS; DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2 D Molecular matchmaker E tll2466 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D Strand discrimination factor D DNA exonucleases D DNA polymerase III holoenzyme E tll2056 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E tll2069 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] E tll2349 dnaN; DNA polymerase III beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] E tlr1573 ORF_ID:tlr1573; hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] E tll0518 dnaX; DNA polymerase III delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] E tlr1132 DNA polymerase III gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D DNA ligase E tll0857 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Other MMR factors E tlr2459 pcrA; ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E tll0312 ORF_ID:tll0312; hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] E tlr1490 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein E tlr1640 ORF_ID:tlr1640; probable site-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] E tlr1578 ORF_ID:tlr1578; putative adenine specific methyl transferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] B DSBR (double strand breaks repair) C HR (homologous recombination) D RecBC pathway proteins E tlr2089 recA; recombination protein K03553 recA; recombination protein RecA E tlr0532 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA E tll2253 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E tlr1137 ruvC; Holliday juction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] E tll0415 primosomal replication factor Y K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] E tlr2175 ORF_ID:tlr2175; hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 E tlr1977 ORF_ID:tlr1977; probable exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 E tll0060 ORF_ID:tll0060; similar to DNA repair protein RAD32 K03547 sbcD; DNA repair protein SbcD/Mre11 D RecFOR pathway proteins E tlr2089 recA; recombination protein K03553 recA; recombination protein RecA E tlr1103 radA; DNA repair protein K04485 radA; DNA repair protein RadA/Sms E tll2444 recF; DNA repair and genetic recombination protein K03629 recF; DNA replication and repair protein RecF E tll0735 recG; DNA recombinase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] E tlr0174 recJ; single-strand-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E tll1243 ORF_ID:tll1243; probable single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] E tlr2234 ORF_ID:tlr2234; similar to DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) E tll2204 recR; recombination protein K06187 recR; recombination protein RecR E tlr0532 ruvA; Holliday junction DNA helicase K03550 ruvA; holliday junction DNA helicase RuvA E tll2253 ruvB; Holliday junction DNA helicase K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] E tlr1137 ruvC; Holliday juction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D AddAB pathway proteins D Other HR factor D Archaeal homologous recombinant proteins E tlr2175 ORF_ID:tlr2175; hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50 E tlr1977 ORF_ID:tlr1977; probable exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11 E tll0060 ORF_ID:tll0060; similar to DNA repair protein RAD32 K03547 sbcD; DNA repair protein SbcD/Mre11 C NHEJ (non-homologous end-joining) D Two-component NHEJ DNA repair complex D SHIIR (short-homology-independent illegitimate recombination) E Facilitator F tlr1369 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F tll1617 gyrA; DNA gyrase A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] F tll0647 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] F tll1881 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] E Supressor F tll2267 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta D SHDIR (short-homology-dependent illegitimate recombination) E RecET pathway F tlr0174 recJ; single-strand-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F tll1243 ORF_ID:tll1243; probable single-strand DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] F tlr2234 ORF_ID:tlr2234; similar to DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) F tll2204 recR; recombination protein K06187 recR; recombination protein RecR F tll0857 lig; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] E Facilitator E Supressor F tlr0800 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] F tll0184 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A F tlr2033 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B B TLS (translesion DNA synthesis) factors C Y-family DNA polymerases C Other SOS response factors D tlr2089 recA; recombination protein K03553 recA; recombination protein RecA D tlr1490 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein B Other factors with a suspected DNA repair function C DNA polymerase C DNA helicases D tlr1240 ORF_ID:tlr1240; hypothetical protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] C Modulation of nucleotide pools D tll1450 ORF_ID:tll1450; mutator MutT homolog K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] C Others ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024