+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Thermococcus kodakarensis

% ! ACRISPR-Cas system B Universal Cas proteins C TK0455 hypothetical protein, conserved, DUF48 family K15342 cas1; CRISP-associated protein Cas1 C TK0445 hypothetical protein, conserved, DUF196 family K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D TK0460 DEAD/DEAH box helicase, fused to N-terminal HD domain K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D TK0450 DEAD/DEAH box helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] D TK0449 metal-dependent phosphohydrolase, HD superfamily K07475 cas3; CRISPR-associated endonuclease Cas3-HD [EC:3.1.-.-] C Subtype I-A factors D TK0453 hypothetical protein, conserved, DUF73 family, insertion K19074 csa2; CRISPR-associated protein Csa2 D TK0448 predicted transcription regulator, containing DNA-binding HTH domain K07725 csa3; CRISPR-associated protein Csa3 D TK0463 hypothetical protein, conserved K19088 cst1; CRISPR-associated protein Cst1 D TK0462 hypothetical protein, conserved K19075 cst2; CRISPR-associated protein Cst2 D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TK0452 hypothetical protein, conserved, RAMP superfamily K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c D TK0461 hypothetical protein, conserved, RAMP superfamily K19090 cas5t; CRISPR-associated protein Cas5t D TK0464 hypothetical protein, conserved, RAMP superfamily K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D TK2253 hypothetical protein, conserved, RAMP superfamily K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-B factors D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TK0464 hypothetical protein, conserved, RAMP superfamily K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] D TK2253 hypothetical protein, conserved, RAMP superfamily K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system B Type II R-M system C Restriction endonucleases C DNA methyltransferases B Type III R-M system B Type IV R-M system C TK1010 putative 5-methylcytosine restriction system, catalytic subunit K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD D TK2270 hypothetical protein, conserved K07746 parD1_3_4; antitoxin ParD1/3/4 C Doc-Phd C HigB-HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D TK1421 cell division GTPase K03531 ftsZ; cell division protein FtsZ D TK2271 cell division GTPase K03531 ftsZ; cell division protein FtsZ D TK1408 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D TK0337 predicted nucleic acid-binding protein, containing PIN domain and zinc-ribbon module K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023