+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Thermococcus kodakarensis
%
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ACRISPR-Cas system
B Universal Cas proteins
C TK0455 hypothetical protein, conserved, DUF48 family K15342 cas1; CRISP-associated protein Cas1
C TK0445 hypothetical protein, conserved, DUF196 family K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D TK0460 DEAD/DEAH box helicase, fused to N-terminal HD domain K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D TK0450 DEAD/DEAH box helicase K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D TK0449 metal-dependent phosphohydrolase, HD superfamily K07475 cas3; CRISPR-associated endonuclease Cas3-HD [EC:3.1.-.-]
C Subtype I-A factors
D TK0453 hypothetical protein, conserved, DUF73 family, insertion K19074 csa2; CRISPR-associated protein Csa2
D TK0448 predicted transcription regulator, containing DNA-binding HTH domain K07725 csa3; CRISPR-associated protein Csa3
D TK0463 hypothetical protein, conserved K19088 cst1; CRISPR-associated protein Cst1
D TK0462 hypothetical protein, conserved K19075 cst2; CRISPR-associated protein Cst2
D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TK0452 hypothetical protein, conserved, RAMP superfamily K19089 cas5a_b_c; CRISPR-associated protein Cas5a/b/c
D TK0461 hypothetical protein, conserved, RAMP superfamily K19090 cas5t; CRISPR-associated protein Cas5t
D TK0464 hypothetical protein, conserved, RAMP superfamily K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D TK2253 hypothetical protein, conserved, RAMP superfamily K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-B factors
D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-D factors
D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TK0464 hypothetical protein, conserved, RAMP superfamily K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D TK2253 hypothetical protein, conserved, RAMP superfamily K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D TK0069 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D TK0458 predicted exonuclease, RecB family K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
B Type III R-M system
B Type IV R-M system
C TK1010 putative 5-methylcytosine restriction system, catalytic subunit K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
C YoeB-YefM
C HipA-HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
D TK2270 hypothetical protein, conserved K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
C HigB-HigA
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D TK1421 cell division GTPase K03531 ftsZ; cell division protein FtsZ
D TK2271 cell division GTPase K03531 ftsZ; cell division protein FtsZ
D TK1408 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D TK0337 predicted nucleic acid-binding protein, containing PIN domain and zinc-ribbon module K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023