+E Ribosome biogenesis KO
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Ribosome Biogenesis - Wolinella succinogenes
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D WS1899 RNC; RIBONUCLEASE III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C WS1292 GTP-BINDING PROTEIN K03595 era; GTPase
C WS0505 PUTATIVE GTP-BINDING PROTEIN K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C WS0155 DKSA-LIKE PROTEIN K06204 dksA; RNA polymerase-binding transcription factor
C WS2102 hypothetical protein K06204 dksA; RNA polymerase-binding transcription factor
C WS1778 NUSA; TRANSCRIPTION ELONGATION FACTOR K02600 nusA; transcription termination/antitermination protein NusA
C WS0296 NUSB; TRANSCRIPTION TERMINATION PROTEIN K03625 nusB; transcription antitermination protein NusB
C WS0462 NUSG; TRANSCRIPTION ANTITERMINATION PROTEIN NUSG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D WS0065 KSGA; PUTATIVE DIMETHYLADENOSINE TRANSFERASE 16S RRNA DIMETHYLASEEC 2.1.1. K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D WS2155 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D WS0867 gidB; GLUCOSE INHIBITED DIVISION PROTEIN B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D WS0170 conserved hypothetical protein CJ0693C K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D WS0445 PUTATIVE METHYLASE K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D WS0585 HLYA; PUTATIVE HEMOLYSIN K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D WS0446 conserved hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D WS0156 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D WS0017 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D WS0062 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D WS0585 HLYA; PUTATIVE HEMOLYSIN K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D WS1979 PUTATIVE RIBOSOMAL PSEUDOURIDINE SYNTHASE K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D WS0143 PUTATIVE RIBOSOMAL PSEUDOURIDINE SYNTHASE K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D WS0417 PUTATIVE RIBOSOMAL PSEUDOURIDINE SYNTHASE K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D WS2115 PUTATIVE RIBOSOMAL PSEUDOURIDINE SYNTHASE K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C WS0070 PAB1098; hypothetical protein K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C WS0550 rimM; PUTATIVE 16S RRNA PROCESSING PROTEIN K02860 rimM; 16S rRNA processing protein RimM
C WS1769 conserved hypothetical protein-2-methylthioadenine synthetase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C WS0439 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
C WS0620 PRMA; POSSIBLE RIBOSOMAL PROTEIN METHYLTRANSFERASE K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C WS1899 RNC; RIBONUCLEASE III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C WS1884 conserved hypothetical protein-Predicted endonuclease K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
C WS1482 ATP-DEPENDENT RNA HELICASE, DEAD-BOX FAMILY DEAD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
B GTPases
C WS1292 GTP-BINDING PROTEIN K03595 era; GTPase
C WS2040 PUTATIVE GTP-BINDING PROTEIN K03977 engA; GTPase
C WS0505 PUTATIVE GTP-BINDING PROTEIN K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C WS0240 SPOT; GUANOSINE-PYROPHOSPHOHYDROLASE K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C WS2017 conserved hypothetical protein K02834 rbfA; ribosome-binding factor A
C WS2018 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
C WS0555 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
C WS2170 hypothetical protein K05808 hpf; ribosome hibernation promoting factor
C WS1354 PUTATIVE GTP-BINDING PROTEIN K06942 ychF; ribosome-binding ATPase
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024