+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Xylella fastidiosa M12

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E Xfasm12_1444 Ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins D Xfasm12_2023 Fructose-bisphosphate aldolase K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D Xfasm12_1793 DNA-binding protein K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D Xfasm12_0532 histone-like protein K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D Xfasm12_2093 integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Xfasm12_1596 integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D Xfasm12_1433 DnaJ protein K05516 cbpA; curved DNA-binding protein D Xfasm12_0001 chromosomal replication initiator K02313 dnaA; chromosomal replication initiator protein D Xfasm12_0735 conserved hypothetical protein K04047 dps; starvation-inducible DNA-binding protein D Xfasm12_0976 DNA-binding protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Xfasm12_0070 host factor-I protein K03666 hfq; host factor-I protein B Chromosome partitioning proteins C MukBEF complex C Condensin-like complex D Xfasm12_2130 chromosome segregation protein K03529 smc; chromosome segregation protein D Xfasm12_1610 segregation and condensation protein A K05896 scpA; segregation and condensation protein A D Xfasm12_1611 putative transcriptional regulator K06024 scpB; segregation and condensation protein B C Divisome proteins D Xfasm12_2044 cell division protein K03590 ftsA; cell division protein FtsA D Xfasm12_0617 cell division protein FtsB K05589 ftsB; cell division protein FtsB D Xfasm12_2244 ABC transporter ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein D Xfasm12_2053 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Xfasm12_0793 cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Xfasm12_2054 cell division protein K03586 ftsL; cell division protein FtsL D Xfasm12_2045 cell division protein K03589 ftsQ; cell division protein FtsQ D Xfasm12_2049 cell division protein K03588 ftsW; cell division protein FtsW D Xfasm12_2243 cell division protein K09811 ftsX; cell division transport system permease protein D Xfasm12_2043 cell division protein K03531 ftsZ; cell division protein FtsZ D Xfasm12_2129 cell division protein K03528 zipA; cell division protein ZipA D Xfasm12_0963 conserved hypothetical protein K09888 zapA; cell division protein ZapA D Xfasm12_0964 conserved hypothetical protein K09892 zapB; cell division protein ZapB D Xfasm12_1195 ATPase K06916 zapE; cell division protein ZapE D Xfasm12_2082 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Xfasm12_0932 precursor of drug resistance protein K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D Xfasm12_0680 cell division inhibitor K03610 minC; septum site-determining protein MinC D Xfasm12_0679 septum site-determining protein K03609 minD; septum site-determining protein MinD D Xfasm12_0678 cell division topological specificity factor K03608 minE; cell division topological specificity factor C Other chromosome partitioning proteins D Xfasm12_0668 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D Xfasm12_0669 rod shape-determining protein K03570 mreC; rod shape-determining protein MreC D Xfasm12_0670 rod shape-determining protein K03571 mreD; rod shape-determining protein MreD D Xfasm12_0672 rod shape-determining protein K05837 rodA; rod shape determining protein RodA D Xfasm12_1474 chromosome partitioning protein K03496 parA; chromosome partitioning protein D Xfasm12_0431 partition protein K03496 parA; chromosome partitioning protein D Xfasm12_1473 chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Xfasm12_0047 transcriptional repressor K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Xfasm12_0705 topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Xfasm12_0612 DNA topoisomerase (ATP-hydrolyzing) K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Xfasm12_0921 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Xfasm12_1035 glucose inhibited division protein K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Xfasm12_0825 site-specific recombinase K03733 xerC; integrase/recombinase XerC D Xfasm12_0772 integrase/recombinase K04763 xerD; integrase/recombinase XerD D Xfasm12_1326 polysaccharide export protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D Xfasm12_1167 cell filamentation protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Xfasm12_0776 GTP-binding protein K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024