+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Xanthomonas oryzae pv. oryzae KACC 10331

% ! ACRISPR-Cas system B Universal Cas proteins C XOO0867 conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1 C XOO0866 conserved hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D XOO0872 Predicted helicases K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D XOO0868 recB family exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-B factors D XOO0868 recB family exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D XOO0870 conserved hypothetical protein K19117 csd1; CRISPR-associated protein Csd1 D XOO0869 conserved hypothetical protein K19118 csd2; CRISPR-associated protein Csd2 D XOO0868 recB family exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D XOO0871 conserved hypothetical protein K19119 cas5d; CRISPR-associated protein Cas5d C Subtype I-D factors D XOO0868 recB family exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D XOO0868 recB family exonuclease K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C XOO3452 type I restriction-modification system endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C XOO3461 hsdR-2; type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C XOO3464 HsdS; Restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C XOO3455 restriction endonuclease S subunits K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C XOO3457 hsdM-1; type I restriction system adenine methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C XOO3463 hsdM-2; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D XOO1046 Dam; Site-specific DNA methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D XOO1717 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D XOO0607 Dcm; Site-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system C XOO4211 methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] B Type IV R-M system C XOO3458 uncharacterized conserved protein K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR D XOO0162 hypothetical protein K19048 symE; toxic protein SymE D XOO2821 conserved hypothetical protein K19048 symE; toxic protein SymE D XOO1938 conserved hypothetical protein K19048 symE; toxic protein SymE C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ C YoeB-YefM C HipA-HipB D XOO4507 hipA; HipA protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA D XOO3836 conserved hypothetical protein K19163 ccdB; toxin CcdB C ParE-ParD D XOO0895 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4 C Doc-Phd D XOO3444 doc; death-on-curing protein K07341 doc; death on curing protein C HigB-HigA D XOO4468 HigB; Plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D XOO4467 vapI; virulence associated protein K21498 higA-1; antitoxin HigA-1 C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D XOO3822 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ D XOO3970 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D XOO1996 parC; topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D XOO2969 parE; topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D XOO1504 gluS; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D XOO2306 conserved hypothetical protein K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023