+D GENES KO
#
KEGG Orthology (KO) - Yersinia aldovae
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:yal00010]
D AT01_3662 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AT01_2145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AT01_2391 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AT01_3506 pfkB; phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D AT01_2944 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AT01_2384 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AT01_1734 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_42 kbaY; D-tagatose-1,6-bisphosphate aldolase subunit KbaY K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_2389 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AT01_545 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AT01_1735 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AT01_3829 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AT01_3114 putative phosphoglycerate mutase gpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AT01_2403 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AT01_3275 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AT01_287 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AT01_580 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AT01_275 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AT01_3225 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AT01_3226 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_350 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D AT01_3930 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AT01_522 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AT01_2836 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AT01_3831 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AT01_43 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AT01_1225 histidine phosphatase super family protein K01085 agp; glucose-1-phosphatase [EC:3.1.3.10]
D AT01_2450 yihX; phosphatase yihX K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D AT01_3780 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AT01_546 aldose 1-epimerase family protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15]
D AT01_2688 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AT01_2716 hypothetical protein K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D AT01_3450 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D AT01_3638 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AT01_878 ptsG; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AT01_443 PTS system, maltose and glucose-specific subfamily, IIC component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
C 00020 Citrate cycle (TCA cycle) [PATH:yal00020]
D AT01_3798 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AT01_485 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AT01_3231 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AT01_853 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AT01_3803 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AT01_3804 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3806 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AT01_3805 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AT01_3801 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_3802 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_3799 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AT01_3800 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AT01_2899 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_2898 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_2897 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D AT01_2896 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D AT01_3332 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AT01_1091 hydrolyase, tartrate beta subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AT01_438 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AT01_2948 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AT01_2688 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AT01_3225 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AT01_3226 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AT01_350 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:yal00030]
D AT01_2145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AT01_578 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AT01_3843 lactonase, 7-bladed beta-propeller family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D AT01_3989 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AT01_2704 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AT01_1737 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AT01_3121 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AT01_1728 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AT01_3092 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D AT01_1029 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D AT01_2471 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D AT01_1429 type I phosphodiesterase / nucleotide pyrophosphatase family protein K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AT01_3094 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AT01_3780 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AT01_2990 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D AT01_624 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AT01_577 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AT01_3557 GMC oxidoreductase family protein K19813 gdh; glucose dehydrogenase [EC:1.1.5.9]
D AT01_2530 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AT01_2649 carbohydrate kinase, thermoresistant glucokinase family protein K00851 idnK; gluconokinase [EC:2.7.1.12]
D AT01_2617 pfkB carbohydrate kinase family protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D AT01_1734 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_42 kbaY; D-tagatose-1,6-bisphosphate aldolase subunit KbaY K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_2944 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AT01_2384 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AT01_2391 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AT01_3506 pfkB; phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:yal00040]
D AT01_227 periplasmic pectate lyase family protein K01731 pelW; pectate disaccharide-lyase [EC:4.2.2.9]
D AT01_217 ogl; oligogalacturonate lyase K01730 ogl; oligogalacturonide lyase [EC:4.2.2.6]
D AT01_229 cupin domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D AT01_228 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D AT01_1987 glucuronate isomerase family protein K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D AT01_1986 mannitol dehydrogenase Rossmann domain protein K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D AT01_1985 hypothetical protein K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D AT01_1058 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D AT01_1059 mannitol dehydrogenase Rossmann domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D AT01_525 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AT01_3987 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_3988 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_475 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D AT01_2704 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AT01_1158 hypothetical protein K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D AT01_453 araA; L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D AT01_452 araB; ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16]
D AT01_2571 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D AT01_2572 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D AT01_3104 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D AT01_3102 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D AT01_2105 fGGY; FGGY carbohydrate kinase domain-containing protein K00875 rbtK; D-ribulokinase [EC:2.7.1.47]
D AT01_3336 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D AT01_3335 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D AT01_3338 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:yal00051]
D AT01_1500 glucokinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AT01_3074 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AT01_439 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AT01_3972 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AT01_3971 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AT01_693 nucleotidyl transferase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AT01_3983 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AT01_3336 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3]
D AT01_3335 fucK; L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51]
D AT01_3338 fucA; L-fuculose phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D AT01_3103 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14]
D AT01_3104 rhaB; rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5]
D AT01_3102 rhaD; rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19]
D AT01_2391 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AT01_3506 pfkB; phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D AT01_2944 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AT01_2384 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AT01_2543 mtlD; mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17]
D AT01_3566 srlD; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D AT01_1050 pfkB; phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D AT01_2572 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D AT01_1734 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_42 kbaY; D-tagatose-1,6-bisphosphate aldolase subunit KbaY K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_2389 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AT01_3984 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D AT01_1049 PTS system, Fru family, IIB component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AT01_808 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D AT01_809 PTS system, mannose/fructose/sorbose, IIC component family protein K02795 manY; mannose PTS system EIIC component
D AT01_810 PTS system, mannose/fructose/sorbose, IID component family protein K02796 manZ; mannose PTS system EIID component
D AT01_32 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D AT01_2542 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D AT01_1189 HAD hydrolase, IA, variant 3 family protein K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50]
D AT01_230 yniC; phosphatase YniC K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68]
D AT01_3567 PTS system glucitol/sorbitol-specific IIA component family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D AT01_3568 srlE; glucitol/sorbitol-specific phosphotransferase enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D AT01_3569 srlA; glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:yal00052]
D AT01_3831 galM; galactose mutarotase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AT01_43 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D AT01_3832 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AT01_3833 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AT01_1398 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AT01_3834 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AT01_3987 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_3988 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_3780 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AT01_3662 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AT01_57 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AT01_2391 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AT01_3506 pfkB; phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D AT01_3071 sucrose-6-phosphate hydrolase family protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AT01_848 sucrose-6-phosphate hydrolase family protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AT01_1492 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AT01_1679 glycosyl hydrolases 31 family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:yal00053]
D AT01_525 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AT01_1195 ptsN1; phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AT01_1196 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AT01_1197 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D AT01_475 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
C 00500 Starch and sucrose metabolism [PATH:yal00500]
D AT01_3072 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AT01_3500 phosphotransferase system, EIIB family protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AT01_3071 sucrose-6-phosphate hydrolase family protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AT01_848 sucrose-6-phosphate hydrolase family protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D AT01_1492 hypothetical protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AT01_1679 glycosyl hydrolases 31 family protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D AT01_3987 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_3988 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_2610 bcsA; cellulose synthase catalytic subunit UDP-forming K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D AT01_3451 chbA; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D AT01_3448 chbB; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AT01_3449 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D AT01_2716 hypothetical protein K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D AT01_3450 glycosyl hydrolase 1 family protein K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D AT01_50 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AT01_2663 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AT01_2664 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D AT01_2661 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D AT01_697 glgP; glycogen/starch/alpha-glucan phosphorylases family protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D AT01_2665 glgP; glycogen/starch/alpha-glucan phosphorylases family protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D AT01_2672 glgP; glycogen/starch/alpha-glucan phosphorylases family protein K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D AT01_2662 glgX; glycogen debranching enzyme GlgX K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196]
D AT01_136 alpha amylase, catalytic domain protein K01176 AMY; alpha-amylase [EC:3.2.1.1]
D AT01_3638 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AT01_443 PTS system, maltose and glucose-specific subfamily, IIC component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D AT01_2054 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D AT01_2053 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D AT01_3780 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AT01_3662 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AT01_2145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AT01_1500 glucokinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AT01_3074 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:yal00520]
D AT01_873 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AT01_3771 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AT01_3638 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AT01_3767 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AT01_865 glucokinase family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59]
D AT01_3765 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D AT01_3766 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D AT01_1500 glucokinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AT01_3074 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D AT01_2495 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AT01_2965 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AT01_2494 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AT01_3499 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D AT01_313 hypothetical protein K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D AT01_2031 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AT01_2193 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AT01_2300 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AT01_2299 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D AT01_262 3-beta hydroxysteroid dehydrogenase/isomerase family protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D AT01_260 beta-eliminating lyase family protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D AT01_261 glycosyltransferase like 2 family protein K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D AT01_263 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D AT01_878 ptsG; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AT01_443 PTS system, maltose and glucose-specific subfamily, IIC component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D AT01_3662 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AT01_3780 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AT01_3987 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_3988 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_525 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AT01_3832 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AT01_3833 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D AT01_1398 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AT01_3834 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AT01_808 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D AT01_809 PTS system, mannose/fructose/sorbose, IIC component family protein K02795 manY; mannose PTS system EIIC component
D AT01_810 PTS system, mannose/fructose/sorbose, IID component family protein K02796 manZ; mannose PTS system EIID component
D AT01_2145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AT01_439 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AT01_3972 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AT01_693 nucleotidyl transferase family protein K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AT01_3971 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AT01_3983 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AT01_3984 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D AT01_50 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D AT01_2663 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:yal00620]
D AT01_2836 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AT01_350 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D AT01_3225 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AT01_3226 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_2861 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D AT01_979 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D AT01_522 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AT01_3930 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AT01_1192 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AT01_1193 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AT01_287 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AT01_580 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AT01_1581 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AT01_2093 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AT01_2094 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AT01_1213 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AT01_924 acylphosphatase family protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AT01_1003 thiamine pyrophosphate enzyme, central domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D AT01_355 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D AT01_3874 FAD binding domain protein K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D AT01_1633 aldA; lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D AT01_302 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AT01_3405 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AT01_953 beta-lactamase superfamily domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AT01_609 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D AT01_2530 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AT01_3956 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D AT01_3624 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AT01_2948 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AT01_3332 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AT01_1091 hydrolyase, tartrate beta subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AT01_438 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AT01_2899 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_2898 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_2897 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D AT01_2896 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D AT01_2364 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AT01_2688 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AT01_275 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AT01_2153 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D AT01_3183 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:yal00630]
D AT01_2152 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D AT01_2836 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AT01_2153 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D AT01_2948 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AT01_3798 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AT01_485 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AT01_3231 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AT01_236 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AT01_1097 methylaspartate mutase, E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D AT01_1095 mamA; methylaspartate mutase, S subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D AT01_1098 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D AT01_1157 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D AT01_609 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D AT01_2530 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AT01_2705 gph; sugar (Glycoside-Pentoside-Hexuronide) transporter K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AT01_2452 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AT01_3521 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AT01_1717 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AT01_1719 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_1718 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D AT01_2881 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AT01_1633 aldA; lactaldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D AT01_3339 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D AT01_577 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D AT01_2554 molybdopterin oxidoreductase Fe4S4 domain protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AT01_2555 fdnG; formate dehydrogenase-N alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AT01_2556 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AT01_2557 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D AT01_530 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AT01_642 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:yal00640]
D AT01_2836 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AT01_1192 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AT01_2860 ackA; acetate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15]
D AT01_4016 ackA; acetate kinase K19697 pduW; propionate kinase [EC:2.7.2.15]
D AT01_1193 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AT01_4026 propanediol utilization PduL family protein K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_2861 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D AT01_979 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D AT01_2089 putative quinone oxidoreductase YhdH K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AT01_1581 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AT01_2093 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AT01_2094 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AT01_1213 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AT01_234 enoyl-CoA hydratase/isomerase family protein K11264 scpB; methylmalonyl-CoA decarboxylase [EC:4.1.1.-]
D AT01_486 enoyl-CoA hydratase/isomerase family protein K11264 scpB; methylmalonyl-CoA decarboxylase [EC:4.1.1.-]
D AT01_236 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AT01_232 succinate CoA transferase family protein K22214 scpC; propionyl-CoA:succinyl-CoA transferase [EC:2.8.3.27]
D AT01_3805 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AT01_3806 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AT01_2637 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AT01_3231 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AT01_929 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D AT01_1939 yqhD; alcohol dehydrogenase YqhD K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
D AT01_3059 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D AT01_3339 fucO; lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77]
D AT01_4034 pduC; propanediol dehydratase large subunit K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28]
D AT01_4033 pduD; propanediol dehydratase medium subunit K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28]
D AT01_4032 pduE; propanediol dehydratase small subunit K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28]
D AT01_4021 iron-containing alcohol dehydrogenase family protein K13921 pduQ; 1-propanol dehydrogenase
D AT01_4022 aldehyde dehydrogenase family protein K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87]
C 00650 Butanoate metabolism [PATH:yal00650]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AT01_2511 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D AT01_522 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AT01_3801 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_3802 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_3799 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AT01_3800 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AT01_2899 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_2898 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_2897 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D AT01_2896 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D AT01_2074 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AT01_41 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase family protein K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373]
D AT01_2861 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D AT01_979 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D AT01_350 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D AT01_2324 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_3186 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_403 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_2657 alsS; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_3187 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AT01_402 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AT01_2323 ilvM; acetolactate synthase isozyme 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D AT01_2658 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
C 00660 C5-Branched dibasic acid metabolism [PATH:yal00660]
D AT01_2324 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_3186 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_403 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_2657 alsS; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_3187 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AT01_402 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AT01_2323 ilvM; acetolactate synthase isozyme 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D AT01_2658 budA; alpha-acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5]
D AT01_3805 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AT01_3806 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AT01_1098 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2]
D AT01_1097 methylaspartate mutase, E subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D AT01_1095 mamA; methylaspartate mutase, S subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D AT01_3181 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AT01_3180 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AT01_3182 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:yal00562]
D AT01_349 phosphatidylinositol-specific phospholipase C, X domain protein K01771 plc; 1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]
D AT01_3526 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AT01_51 appA; periplasmic AppA protein K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D AT01_2642 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AT01_2636 xylose isomerase-like TIM barrel family protein K06606 iolI; 2-keto-myo-inositol isomerase [EC:5.3.99.11]
D AT01_2644 iolE; myo-inosose-2 dehydratase K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D AT01_2641 iolD; 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D AT01_2638 iolB; 5-deoxy-glucuronate isomerase K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D AT01_2640 iolC; 5-dehydro-2-deoxygluconokinase K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D AT01_2637 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AT01_2389 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:yal00190]
D AT01_1183 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D AT01_1182 nuoB; NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D AT01_1181 nuoD; NADH dehydrogenase (quinone), D subunit K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D AT01_1180 nuoE; NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D AT01_1179 nuoF; NADH oxidoreductase (quinone), F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D AT01_1178 nuoG; NADH dehydrogenase (quinone), G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D AT01_1177 nuoH; NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D AT01_1176 NADH-quinone oxidoreductase, chain I family protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D AT01_1175 nuoJ; NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D AT01_1174 nuoK; NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D AT01_1173 nuoL; NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D AT01_1172 nuoM; NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D AT01_1171 proton-translocating NADH-quinone oxidoreductase, chain N family protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D AT01_871 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AT01_3801 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_3802 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_3799 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AT01_3800 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AT01_2899 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_2898 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_2897 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D AT01_2896 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D AT01_1467 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AT01_1466 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D AT01_1465 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D AT01_1464 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D AT01_1463 cyoA; ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D AT01_650 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AT01_3808 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AT01_651 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AT01_3809 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AT01_3810 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AT01_2490 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AT01_2492 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AT01_2491 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AT01_2489 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AT01_2493 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AT01_2486 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AT01_2488 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AT01_2487 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AT01_2943 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D AT01_3589 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation by Calvin cycle [PATH:yal00710]
D AT01_1735 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AT01_545 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AT01_1734 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_42 kbaY; D-tagatose-1,6-bisphosphate aldolase subunit KbaY K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_2944 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AT01_2384 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AT01_1737 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AT01_1728 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AT01_2724 phosphoribulokinase / Uridine kinase family protein K00855 PRK; phosphoribulokinase [EC:2.7.1.19]
D AT01_2389 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AT01_2704 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AT01_3121 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AT01_2364 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AT01_2688 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D AT01_3624 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AT01_2948 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Other carbon fixation pathways [PATH:yal00720]
D AT01_350 nifJ; ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D AT01_275 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AT01_2364 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AT01_2948 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AT01_3332 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AT01_1091 hydrolyase, tartrate beta subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AT01_438 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AT01_3801 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_3802 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_3799 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AT01_3800 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AT01_2899 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_2898 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_2897 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D AT01_2896 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D AT01_3806 sucD; succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AT01_3805 sucC; succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AT01_853 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AT01_485 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AT01_3231 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AT01_1581 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AT01_2093 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AT01_2094 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AT01_1213 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AT01_236 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AT01_3940 formate dehydrogenase, alpha subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D AT01_458 formate--tetrahydrofolate ligase family protein K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D AT01_1372 folD; bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AT01_2366 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D AT01_1193 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AT01_1192 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AT01_2836 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
C 00680 Methane metabolism [PATH:yal00680]
D AT01_3930 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AT01_3929 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D AT01_2554 molybdopterin oxidoreductase Fe4S4 domain protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AT01_2555 fdnG; formate dehydrogenase-N alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AT01_2556 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AT01_2557 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D AT01_3940 formate dehydrogenase, alpha subunit K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-]
D AT01_3521 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AT01_3275 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AT01_2364 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AT01_2948 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AT01_1734 fbaA; fructose-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_42 kbaY; D-tagatose-1,6-bisphosphate aldolase subunit KbaY K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AT01_2944 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AT01_2384 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D AT01_2391 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AT01_3506 pfkB; phosphofructokinase K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D AT01_1053 cytochrome c554 and c-prime family protein K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D AT01_1054 molybdopterin guanine dinucleotide-containing S/N-oxide reductases family protein K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D AT01_1192 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AT01_1193 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AT01_2836 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AT01_275 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AT01_3829 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AT01_3114 putative phosphoglycerate mutase gpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AT01_2403 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AT01_1726 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AT01_975 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AT01_3097 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:yal00910]
D AT01_3259 narK; nitrite extrusion protein 1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D AT01_3620 napA; periplasmic nitrate reductase, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D AT01_3621 nitrate reductase cytochrome c-type subunit family protein K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D AT01_2710 nirB; nitrite reductase [NAD(P)H], large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D AT01_2709 nirD; nitrite reductase [NAD(P)H] small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D AT01_1001 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D AT01_2630 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AT01_2452 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AT01_2020 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AT01_2021 glutamate synthase, small subunit domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AT01_3240 can; carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D AT01_1672 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D AT01_422 eukaryotic-type carbonic anhydrase family protein K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:yal00920]
D AT01_3631 sulfate ABC transporter, sulfate-binding family protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AT01_2390 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D AT01_3632 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AT01_3633 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AT01_3634 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AT01_3288 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AT01_3287 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AT01_3289 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D AT01_2934 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D AT01_3282 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D AT01_3280 sulfite reductase [NADPH] flavoprotein, alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D AT01_3281 cysI; sulfite reductase (NADPH) hemoprotein, beta-component K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D AT01_3883 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AT01_2669 glpE; thiosulfate sulfurtransferase glpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1]
D AT01_2398 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AT01_1446 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AT01_3641 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AT01_2154 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D AT01_2371 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AT01_3340 dmsA; anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D AT01_3341 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D AT01_3342 DMSO reductase anchor subunit family protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:yal00061]
D AT01_1581 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AT01_2093 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AT01_2094 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AT01_1213 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AT01_885 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D AT01_3387 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D AT01_3388 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D AT01_1827 hypothetical protein K02078 acpP; acyl carrier protein
D AT01_3324 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D AT01_887 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AT01_888 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AT01_1228 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AT01_3397 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AT01_3322 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AT01_884 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AT01_3400 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AT01_3325 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_886 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_3399 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_938 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D AT01_1586 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AT01_2511 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D AT01_3185 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AT01_570 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:yal00071]
D AT01_2203 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AT01_1239 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AT01_1535 hypothetical protein K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D AT01_3185 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AT01_570 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AT01_1649 acyltransferase family protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D AT01_3930 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AT01_522 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:yal00561]
D AT01_2881 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AT01_3060 dhaK; dihydroxyacetone kinase, DhaK subunit K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D AT01_3061 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D AT01_3062 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D AT01_3059 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D AT01_2383 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AT01_2135 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D AT01_889 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AT01_1967 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AT01_1944 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AT01_2134 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:yal00564]
D AT01_2399 ketopantoate reductase PanE/ApbA family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AT01_2258 glpA; glycerol-3-phosphate dehydrogenase, anaerobic, A subunit K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AT01_2666 FAD dependent oxidoreductase family protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AT01_2257 glpB; glycerol-3-phosphate dehydrogenase, anaerobic, B subunit K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3]
D AT01_2256 glpC; glycerol-3-phosphate dehydrogenase, anaerobic, C subunit K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C
D AT01_2135 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D AT01_1967 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AT01_1944 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AT01_2134 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AT01_2266 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D AT01_2262 prolyl oligopeptidase family protein K01048 pldB; lysophospholipase [EC:3.1.1.5]
D AT01_2225 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AT01_2260 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AT01_1649 acyltransferase family protein K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D AT01_2621 CDP-diacylglycerol pyrophosphatase family protein K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26]
D AT01_1591 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AT01_1558 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AT01_2902 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D AT01_141 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 PGS1; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D AT01_1476 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D AT01_483 pgpB; phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27]
D AT01_3501 haloacid dehalogenase-like hydrolase family protein K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D AT01_513 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism [PATH:yal00565]
D AT01_2266 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism [PATH:yal00600]
D AT01_57 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AT01_3771 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
D AT01_2266 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D AT01_2266 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:yal00592]
D AT01_2266 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D AT01_2203 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AT01_1239 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:yal01040]
D AT01_1381 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AT01_1440 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D AT01_508 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:yal00230]
D AT01_1953 nudix-type nucleoside diphosphatase, YffH/AdpP family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AT01_2693 nudE; ADP compounds hydrolase nudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-]
D AT01_1429 type I phosphodiesterase / nucleotide pyrophosphatase family protein K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AT01_3094 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D AT01_3780 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AT01_624 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AT01_1209 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AT01_2163 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AT01_3594 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AT01_802 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D AT01_3505 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D AT01_3595 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AT01_1378 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AT01_1377 purE; phosphoribosylaminoimidazole carboxylase catalytic subunit PurE K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D AT01_3606 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AT01_858 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AT01_2162 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AT01_1419 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AT01_1394 ushA; protein UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AT01_3298 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AT01_3763 HAD hydrolase, IA, variant 1 family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D AT01_2691 HAD hydrolase, IA, variant 3 family protein K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-]
D AT01_1397 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D AT01_3095 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AT01_1502 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AT01_3376 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AT01_3239 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D AT01_3553 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AT01_3541 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AT01_3112 hypothetical protein K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73]
D AT01_1758 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AT01_1518 gpt; xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D AT01_3554 guaA; GMP synthase glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AT01_3213 guaC; guanosine monophosphate reductase K00364 guaC; GMP reductase [EC:1.7.1.7]
D AT01_2430 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AT01_3416 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AT01_1146 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AT01_1147 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AT01_3415 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AT01_3000 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AT01_3266 dgt; deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D AT01_1187 HD domain protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D AT01_152 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D AT01_2432 spoT; bifunctional (p)ppGpp synthase/hydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AT01_3588 ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AT01_2306 ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AT01_3272 relA; GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D AT01_2281 adenylate cyclase, class-I family protein K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1]
D AT01_3790 cAMP phosphodiesterases class-II family protein K01120 cpdP; 3',5'-cyclic-nucleotide phosphodiesterase [EC:3.1.4.17]
D AT01_2919 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AT01_445 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D AT01_409 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D AT01_1611 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D AT01_3807 hypothetical protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AT01_2933 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AT01_1407 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AT01_3273 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D AT01_1951 calcineurin-like phosphoesterase family protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D AT01_3142 apaH; bis(5'-nucleosyl)-tetraphosphatase K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D AT01_3289 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D AT01_3288 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AT01_3287 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AT01_3436 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D AT01_3435 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D AT01_3434 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:yal00240]
D AT01_3137 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AT01_3136 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AT01_2050 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AT01_2051 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D AT01_896 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AT01_2062 amidohydrolase family protein K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AT01_946 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D AT01_2421 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AT01_478 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AT01_1595 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AT01_3541 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AT01_3273 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D AT01_2083 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D AT01_1980 hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D AT01_3274 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AT01_973 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D AT01_535 nudG; CTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65]
D AT01_3966 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D AT01_1394 ushA; protein UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AT01_3298 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AT01_3763 HAD hydrolase, IA, variant 1 family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D AT01_400 noncanonical pyrimidine nucleotidase, YjjG family K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-]
D AT01_2219 udp; uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D AT01_1502 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D AT01_3596 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D AT01_3807 hypothetical protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AT01_2933 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D AT01_1611 hypothetical protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
D AT01_3957 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D AT01_2711 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AT01_3000 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AT01_3967 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D AT01_3416 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AT01_1146 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AT01_1147 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AT01_3415 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AT01_1187 HD domain protein K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89]
D AT01_152 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89]
D AT01_881 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D AT01_2419 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AT01_3093 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D AT01_523 thymidine kinase family protein K00857 tdk; thymidine kinase [EC:2.7.1.21]
D AT01_1641 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AT01_425 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:yal00250]
D AT01_951 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AT01_3483 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AT01_541 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AT01_976 ansB; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AT01_2480 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D AT01_3762 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AT01_1546 carbon-nitrogen hydrolase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D AT01_1185 hypothetical protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AT01_2885 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AT01_4087 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AT01_2360 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AT01_2919 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AT01_858 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AT01_2050 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AT01_2051 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D AT01_2074 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AT01_2020 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AT01_2021 glutamate synthase, small subunit domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AT01_2630 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AT01_123 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AT01_2452 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AT01_3137 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AT01_3136 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AT01_677 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AT01_1761 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AT01_2495 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AT01_1209 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:yal00260]
D AT01_2147 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AT01_3117 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D AT01_2370 aspartate kinase domain protein K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D AT01_2651 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AT01_3118 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D AT01_3119 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AT01_1005 ltaE; low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D AT01_3521 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AT01_609 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D AT01_2530 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D AT01_2881 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D AT01_3829 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AT01_3114 putative phosphoglycerate mutase gpmB K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AT01_2403 gpmI; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D AT01_1726 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AT01_975 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AT01_3097 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D AT01_425 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D AT01_2407 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AT01_2406 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D AT01_1717 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AT01_1719 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_1718 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D AT01_1558 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AT01_1034 CBS domain protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D AT01_1035 cys/Met metabolism PLP-dependent enzyme family protein K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D AT01_3688 metC; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D AT01_806 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AT01_1032 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AT01_2320 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AT01_2858 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AT01_2523 pyridoxal-phosphate dependent enzyme family protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AT01_3329 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D AT01_1226 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D AT01_502 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AT01_501 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AT01_1815 beta-eliminating lyase family protein K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:yal00270]
D AT01_2398 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AT01_1446 pyridoxal-phosphate dependent enzyme family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AT01_3641 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D AT01_1035 cys/Met metabolism PLP-dependent enzyme family protein K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D AT01_3688 metC; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D AT01_1935 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AT01_444 C-S lyase family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AT01_1034 CBS domain protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D AT01_2149 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AT01_2221 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AT01_1741 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AT01_3234 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D AT01_3235 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AT01_918 esaI; acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D AT01_3265 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D AT01_1540 mtnK; S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D AT01_3376 multi-copper polyphenol oxidoreductase laccase family protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AT01_1541 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D AT01_1544 mtnB; methylthioribulose-1-phosphate dehydratase K08964 mtnB; methylthioribulose-1-phosphate dehydratase [EC:4.2.1.109]
D AT01_1543 mtnC; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K09880 mtnC; enolase-phosphatase E1 [EC:3.1.3.77]
D AT01_1542 mtnD; acireductone dioxygenase K08967 mtnD; 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]
D AT01_2123 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AT01_212 putative gAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D AT01_2008 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_413 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_738 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_3359 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AT01_2147 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AT01_3117 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D AT01_2370 aspartate kinase domain protein K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D AT01_2651 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AT01_2154 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D AT01_2371 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AT01_2322 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AT01_3358 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AT01_1748 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AT01_951 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AT01_3883 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AT01_1226 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D AT01_118 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D AT01_2948 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AT01_806 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AT01_1032 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D AT01_3635 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D AT01_1726 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AT01_975 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:yal00280]
D AT01_2322 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AT01_2203 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AT01_1239 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AT01_236 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AT01_2637 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:yal00290]
D AT01_2320 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AT01_2858 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AT01_2523 pyridoxal-phosphate dependent enzyme family protein K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AT01_3181 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AT01_3180 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AT01_3182 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D AT01_2324 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_3186 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_403 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_2657 alsS; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_3187 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AT01_402 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AT01_2323 ilvM; acetolactate synthase isozyme 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D AT01_2317 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AT01_2321 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AT01_2322 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AT01_2529 aminotransferase class I and II family protein K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D AT01_1185 hypothetical protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AT01_3183 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:yal00300]
D AT01_2147 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AT01_3117 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D AT01_2370 aspartate kinase domain protein K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D AT01_2651 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AT01_3604 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AT01_3135 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AT01_1600 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D AT01_2721 astC; succinylornithine transaminase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AT01_3612 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AT01_2278 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AT01_1652 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AT01_3194 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AT01_3195 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:yal00310]
D AT01_3804 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AT01_1226 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D AT01_1580 hypothetical protein K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18]
D AT01_2074 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AT01_967 hypothetical protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D AT01_277 hypothetical protein K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-]
C 00220 Arginine biosynthesis [PATH:yal00220]
D AT01_3011 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AT01_4087 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AT01_2360 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AT01_3436 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D AT01_3435 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D AT01_3434 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D AT01_3052 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D AT01_677 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AT01_1761 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AT01_2452 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AT01_3137 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AT01_3136 carA; carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AT01_2630 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AT01_951 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AT01_1185 hypothetical protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AT01_1625 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D AT01_2361 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D AT01_2362 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D AT01_2721 astC; succinylornithine transaminase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AT01_2363 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:yal00330]
D AT01_2711 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D AT01_1740 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D AT01_1752 aguA; agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D AT01_1751 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D AT01_2986 beta-eliminating lyase family protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D AT01_3235 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AT01_3234 speD; S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D AT01_3593 speG; spermidine N(1)-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D AT01_647 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D AT01_645 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D AT01_648 astC; succinylornithine transaminase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D AT01_646 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D AT01_644 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D AT01_1755 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D AT01_123 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AT01_1515 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AT01_1514 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D AT01_794 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AT01_951 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:yal00340]
D AT01_3997 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D AT01_3990 hisE; phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D AT01_3992 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D AT01_3993 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AT01_3991 hisF; imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AT01_3994 hisB; histidine biosynthesis bifunctional protein hisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D AT01_3327 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_3995 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_3996 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D AT01_2591 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D AT01_2590 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D AT01_641 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D AT01_639 hutF; formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D AT01_642 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00350 Tyrosine metabolism [PATH:yal00350]
D AT01_951 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AT01_3327 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_3995 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_2123 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AT01_3930 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AT01_522 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D AT01_2074 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:yal00360]
D AT01_951 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AT01_3327 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_3995 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_2123 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AT01_2645 acetyltransferase domain protein K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D AT01_554 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00380 Tryptophan metabolism [PATH:yal00380]
D AT01_3804 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AT01_3659 thiamine pyrophosphate enzyme, central domain protein K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D AT01_1826 hypothetical protein K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74]
D AT01_1157 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:yal00400]
D AT01_273 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AT01_3828 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AT01_3370 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AT01_2701 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AT01_2092 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AT01_2827 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AT01_1503 aroL; shikimate kinase 2 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AT01_2700 aroK; shikimate kinase 1 K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AT01_974 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AT01_1234 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AT01_497 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AT01_498 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AT01_499 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AT01_500 indole-3-glycerol phosphate synthase family protein K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24]
D AT01_502 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AT01_501 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AT01_3371 tyrA; T-protein K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D AT01_3372 pheA; P-protein K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D AT01_3326 bacterial extracellular solute-binding s, 3 family protein K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D AT01_951 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AT01_3327 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_3995 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_2123 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:yal00410]
D AT01_3244 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D AT01_3245 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AT01_2637 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:yal00430]
D AT01_1490 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AT01_1193 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AT01_1192 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:yal00440]
D AT01_2995 bacterial phosphonate metabolism family protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D AT01_2997 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D AT01_2996 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D AT01_2992 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D AT01_2991 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D AT01_2994 phnJ; protein phnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
D AT01_2989 phnP; phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:yal00450]
D AT01_2371 metB; O-succinylhomoserine (thiol)-lyase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D AT01_1935 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AT01_444 C-S lyase family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AT01_2149 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AT01_2221 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AT01_1035 cys/Met metabolism PLP-dependent enzyme family protein K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D AT01_3688 metC; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D AT01_283 sufS; cysteine desulfurase, SufS family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AT01_987 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AT01_3288 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AT01_3287 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AT01_538 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AT01_2061 beta-eliminating lyase family protein K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D AT01_2559 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D AT01_3964 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:yal00460]
D AT01_1490 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AT01_541 ansA; cytoplasmic L-asparaginase I K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AT01_976 ansB; L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AT01_2480 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D AT01_3521 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:yal00470]
D AT01_2124 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AT01_553 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AT01_3201 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AT01_1521 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AT01_1226 aspartate racemase family protein K25316 racX; amino-acid racemase [EC:5.1.1.10]
D AT01_677 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AT01_1761 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AT01_2339 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AT01_3197 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AT01_344 hypothetical protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D AT01_3329 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D AT01_118 dcyD; D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D AT01_2278 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AT01_1652 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AT01_554 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:yal00480]
D AT01_1490 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AT01_3794 lamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D AT01_3792 allophanate hydrolase subunit 1 family protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D AT01_3793 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D AT01_3358 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AT01_1748 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AT01_3016 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AT01_3536 peptidase family protein K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D AT01_947 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AT01_1519 pepD; Xaa-His dipeptidase family protein K01270 pepD; dipeptidase D [EC:3.4.13.-]
D AT01_319 gstB; glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_2117 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_159 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_201 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_1040 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_2624 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D AT01_853 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AT01_3989 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D AT01_578 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AT01_258 glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D AT01_2347 hybrid peroxiredoxin hyPrx5 K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D AT01_2986 beta-eliminating lyase family protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
D AT01_3235 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:yal00511]
D AT01_57 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D AT01_3771 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AT01_687 glycosyl hydrolases 2 family protein K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis [PATH:yal00540]
D AT01_559 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AT01_1585 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AT01_3205 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AT01_1587 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AT01_1376 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AT01_1584 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AT01_968 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AT01_2039 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AT01_616 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AT01_2040 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AT01_963 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AT01_2411 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AT01_905 lpxL; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AT01_581 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D AT01_30 aspartyl/Asparaginyl beta-hydroxylase family protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D AT01_1063 yeiU; inner membrane protein yeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D AT01_305 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AT01_2595 hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D AT01_819 antimicrobial peptide resistance and lipid A acylation PagP family protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D AT01_264 dolichyl-phosphate-mannose-mannosyltransferase family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D AT01_2110 lpxL; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D AT01_1534 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AT01_1960 rfaE1; bifunctional protein RfaE, domain I K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D AT01_1565 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AT01_2408 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AT01_2410 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AT01_2409 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AT01_3049 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis [PATH:yal00542]
D AT01_2302 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:yal00541]
D AT01_3987 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_3988 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AT01_1398 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AT01_3834 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AT01_525 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D AT01_2297 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AT01_2298 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AT01_2295 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase family protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D AT01_2296 wecD; TDP-D-fucosamine acetyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210]
D AT01_439 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D AT01_3972 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K01840 manB; phosphomannomutase [EC:5.4.2.8]
D AT01_3971 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D AT01_3983 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D AT01_3984 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D AT01_2494 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AT01_2300 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AT01_2299 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D AT01_1400 UDP-D-quinovosamine 4-dehydrogenase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00550 Peptidoglycan biosynthesis [PATH:yal00550]
D AT01_2031 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AT01_2193 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AT01_3200 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AT01_3197 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AT01_3194 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AT01_3201 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AT01_1521 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AT01_3195 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AT01_1592 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AT01_1965 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AT01_1028 putative undecaprenyl-diphosphatase ybjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AT01_3196 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AT01_3199 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AT01_2016 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AT01_2694 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AT01_3255 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D AT01_3539 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D AT01_3737 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AT01_3193 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AT01_816 ftsI; peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AT01_3734 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AT01_1033 dacC; D-alanyl-D-alanine carboxypeptidase dacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AT01_2959 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:yal00552]
D AT01_1965 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AT01_1028 putative undecaprenyl-diphosphatase ybjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AT01_2302 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AT01_1400 UDP-D-quinovosamine 4-dehydrogenase K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:yal00543]
D AT01_2302 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AT01_2291 glycosyltransferase, WecB/TagA/CpsF family protein K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D AT01_2293 4-alpha-L-fucosyltransferase glycosyl transferase group 56 family protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D AT01_661 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AT01_660 pgaD; poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
D AT01_2398 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:yal00730]
D AT01_2171 thiC; phosphomethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D AT01_3560 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AT01_2173 thiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D AT01_3529 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AT01_1472 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AT01_2176 thiH; thiazole biosynthesis protein ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D AT01_1475 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AT01_2175 thiazole biosynthesis ThiG family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D AT01_1894 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D AT01_2172 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AT01_1477 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D AT01_2903 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AT01_398 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AT01_874 thiK; thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89]
D AT01_1407 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:yal00740]
D AT01_484 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AT01_1480 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AT01_684 HAD hydrolase, IIB family protein K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D AT01_2275 HAD hydrolase, IA, variant 1 family protein K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104]
D AT01_1958 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D AT01_1479 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AT01_292 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AT01_3130 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D AT01_51 appA; periplasmic AppA protein K01093 appA; 4-phytase / acid phosphatase [EC:3.1.3.26 3.1.3.2]
D AT01_2204 fre; NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41]
D AT01_1894 thiM; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D AT01_1953 nudix-type nucleoside diphosphatase, YffH/AdpP family protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D AT01_855 nudJ; phosphatase nudJ K12152 nudJ; phosphatase NudJ [EC:3.6.1.-]
D AT01_1208 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:yal00750]
D AT01_315 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D AT01_318 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D AT01_1736 epd; erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D AT01_1217 pdxB; erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290]
D AT01_975 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AT01_3145 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D AT01_3495 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D AT01_3119 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:yal00760]
D AT01_3483 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AT01_3823 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D AT01_3217 nadC; nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D AT01_948 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D AT01_3095 deoD; purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D AT01_3099 nadR; trifunctional NAD biosynthesis/regulator protein NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D AT01_1394 ushA; protein UshA K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D AT01_3298 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AT01_3763 HAD hydrolase, IA, variant 1 family protein K02566 nagD; 5'-nucleotidase [EC:3.1.3.5]
D AT01_3740 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AT01_3273 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D AT01_2169 NADH pyrophosphatase-like rudimentary NUDIX domain protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D AT01_3512 nadE; NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D AT01_3347 ygaD; protein YgaD K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D AT01_542 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D AT01_864 sir2 family protein K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D AT01_3472 ATP-NAD kinase family protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D AT01_2346 pyridine nucleotide-disulfide oxidoreductase family protein K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1]
D AT01_391 pntA; NAD(P)(+) transhydrogenase (AB-specific), alpha subunit K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AT01_392 pntB; NAD(P) transhydrogenase subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D AT01_2074 succinate-semialdehyde dehydrogenase family protein K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:yal00770]
D AT01_2324 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_3186 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_403 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_2657 alsS; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AT01_3187 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AT01_402 ilvN; acetolactate synthase K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AT01_2323 ilvM; acetolactate synthase isozyme 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6]
D AT01_2317 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AT01_2321 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AT01_3246 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D AT01_1470 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D AT01_3245 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AT01_2191 coaA; pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33]
D AT01_2418 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AT01_3273 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D AT01_2413 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AT01_3212 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D AT01_3496 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AT01_1487 hypothetical protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D AT01_2322 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AT01_3244 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:yal00780]
D AT01_3847 bioC; malonyl-acyl carrier protein O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D AT01_1228 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AT01_3397 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AT01_3322 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AT01_884 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AT01_3400 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AT01_3325 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_886 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_3399 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_1586 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AT01_2677 bioH; pimelyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D AT01_3846 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AT01_3844 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AT01_431 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D AT01_3848 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D AT01_3845 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D AT01_2192 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:yal00785]
D AT01_3732 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D AT01_3731 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D AT01_268 lplA; lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3225 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AT01_3226 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AT01_3803 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AT01_3804 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AT01_1717 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D AT01_1719 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AT01_1718 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:yal00790]
D AT01_3933 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D AT01_398 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AT01_591 nudB; dihydroneopterin triphosphate pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D AT01_1966 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D AT01_3247 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AT01_2964 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AT01_3141 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AT01_1212 folC; bifunctional FolC family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AT01_484 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AT01_2719 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D AT01_804 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D AT01_883 pabC; aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D AT01_3279 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AT01_3278 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AT01_1449 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AT01_1610 queF; queuine synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AT01_3858 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AT01_3859 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AT01_3861 moaE; molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AT01_3122 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AT01_3918 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AT01_2462 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:yal00670]
D AT01_3141 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AT01_458 formate--tetrahydrofolate ligase family protein K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D AT01_1372 folD; bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AT01_3521 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AT01_3594 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AT01_2162 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AT01_2781 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AT01_1719 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D AT01_2149 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AT01_1641 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AT01_530 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AT01_2366 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D AT01_1725 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:yal00860]
D AT01_3650 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AT01_621 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AT01_3260 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AT01_2207 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AT01_2282 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D AT01_2283 uroporphyrinogen-III synthase HemD family protein K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D AT01_2168 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D AT01_3626 coproporphyrinogen III oxidase family protein K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D AT01_2455 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D AT01_2198 flavodoxin domain protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D AT01_1406 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D AT01_2284 hemX family protein K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AT01_2707 cysG; siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D AT01_3286 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D AT01_4015 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AT01_1093 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AT01_1467 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AT01_4050 cbiK; sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D AT01_4051 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D AT01_4048 cbiH; cobalt-precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D AT01_4046 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D AT01_4047 cobalamin synthesis G family protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D AT01_4049 cobK; precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D AT01_4043 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D AT01_4045 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D AT01_4044 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D AT01_4042 cbiC; cobalt-precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D AT01_4040 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D AT01_1090 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AT01_493 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AT01_4056 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D AT01_4041 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D AT01_4057 cobU; bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D AT01_4058 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D AT01_4060 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D AT01_4059 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D AT01_4013 hypothetical protein K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D AT01_1094 hypothetical protein K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D AT01_4014 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D AT01_2747 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:yal00130]
D AT01_2137 chorismate lyase family protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D AT01_2136 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AT01_2205 decarboxylase, UbiD family protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D AT01_1208 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AT01_1720 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D AT01_1145 ubiG; 3-demethylubiquinone-9 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D AT01_1721 ubiH; 2-polyprenyl-6-methoxyphenol 4-hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D AT01_2214 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase ubiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AT01_3755 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D AT01_1166 menF; isochorismate hydroxymutase 2 K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D AT01_1165 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D AT01_1164 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20]
D AT01_1162 menC; o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D AT01_1161 menE; O-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D AT01_1163 menB; naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D AT01_278 hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D AT01_2379 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D AT01_128 wrbA; quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AT01_837 3-beta hydroxysteroid dehydrogenase/isomerase family protein K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:yal00900]
D AT01_1475 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AT01_1593 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D AT01_3295 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D AT01_623 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AT01_3296 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D AT01_3545 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D AT01_3134 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D AT01_1208 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AT01_1474 ispA; farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AT01_2952 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AT01_1592 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:yal00907]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AT01_2203 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AT01_1239 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D AT01_1737 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:yal00523]
D AT01_2297 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AT01_2298 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:yal01053]
D AT01_1166 menF; isochorismate hydroxymutase 2 K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D AT01_29 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
C 01055 Biosynthesis of vancomycin group antibiotics
D AT01_2298 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:yal00332]
D AT01_1515 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AT01_1514 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:yal00261]
D AT01_3288 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AT01_3287 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AT01_2147 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AT01_3117 aspartate kinase domain protein K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D AT01_2370 aspartate kinase domain protein K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3]
D AT01_2651 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AT01_3604 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AT01_3135 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AT01_2190 acetyltransferase domain protein K19113 ttr; acetyltransferase [EC:2.3.1.-]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:yal00521]
D AT01_3662 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D AT01_3780 pgm; phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D AT01_3526 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AT01_2642 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D AT01_2297 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AT01_2298 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D AT01_3662 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:yal00525]
D AT01_2297 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AT01_2298 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:yal00401]
D AT01_3371 tyrA; T-protein K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12]
D AT01_951 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AT01_3327 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_3995 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_2123 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D AT01_497 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AT01_498 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AT01_887 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AT01_3325 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_886 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_3399 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D AT01_885 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D AT01_3387 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D AT01_3388 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D AT01_1827 hypothetical protein K02078 acpP; acyl carrier protein
D AT01_3324 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:yal00999]
D AT01_1741 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AT01_2827 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:yal00362]
D AT01_2203 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AT01_1239 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AT01_2618 dmpI; 4-oxalocrotonate tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AT01_3534 fdx; ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
C 00627 Aminobenzoate degradation [PATH:yal00627]
D AT01_924 acylphosphatase family protein K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AT01_1208 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation [PATH:yal00364]
D AT01_2220 prolyl oligopeptidase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:yal00625]
D AT01_3930 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AT01_522 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:yal00361]
D AT01_2220 prolyl oligopeptidase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00623 Toluene degradation [PATH:yal00623]
D AT01_2220 prolyl oligopeptidase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D AT01_2618 dmpI; 4-oxalocrotonate tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation [PATH:yal00633]
D AT01_303 flavin oxidoreductase / NADH oxidase family protein K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D AT01_1903 hybC; hydrogenase-2 large chain K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D AT01_1906 hybO; hydrogenase-2 small chain K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D AT01_2203 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AT01_1239 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
D AT01_3436 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D AT01_3435 ureB; urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5]
D AT01_3434 ureA; urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:yal00930]
D AT01_2202 fadB; fatty oxidation complex, alpha subunit FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8]
D AT01_1238 fadJ; fatty oxidation complex, alpha subunit FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D AT01_2618 dmpI; 4-oxalocrotonate tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation [PATH:yal00626]
D AT01_3930 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AT01_522 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:yal03020]
D AT01_2178 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AT01_2177 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AT01_2774 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AT01_2431 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:yal03010]
D AT01_972 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AT01_1597 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AT01_2755 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AT01_2773 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AT01_2766 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AT01_2926 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AT01_2743 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AT01_2763 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AT01_2025 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AT01_2748 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AT01_2772 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AT01_2742 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AT01_2771 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AT01_2762 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D AT01_2974 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AT01_3363 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AT01_2758 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AT01_2927 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AT01_2753 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AT01_3129 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AT01_1969 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AT01_2181 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AT01_2752 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AT01_2749 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AT01_2750 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AT01_2761 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AT01_2764 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AT01_2179 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AT01_2928 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AT01_2180 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AT01_2182 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AT01_2026 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AT01_2759 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AT01_2768 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AT01_2756 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AT01_2775 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AT01_2765 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AT01_3366 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AT01_252 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AT01_2953 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AT01_2754 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AT01_2751 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AT01_2760 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AT01_1074 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D AT01_2954 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AT01_2416 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AT01_2757 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AT01_2767 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AT01_2373 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AT01_1430 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AT01_890 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AT01_2415 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AT01_2516 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AT01_251 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AT01_1431 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AT01_2770 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AT01_3378 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2829 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2197 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2467 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2338 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2161 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_1564 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2831 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_1561 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2335 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2195 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_3380 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2155 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2464 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_1560 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_3381 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2832 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2334 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2194 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2157 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:yal00970]
D AT01_3648 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_3649 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_1562 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_2159 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_2336 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_2289 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_1371 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_3353 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_3355 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_3354 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_1254 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_5 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AT01_13 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AT01_33 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AT01_3409 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AT01_2333 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AT01_3382 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AT01_143 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AT01_3756 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AT01_3758 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AT01_3759 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AT01_2196 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AT01_2830 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AT01_3379 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AT01_2466 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AT01_142 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_2905 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_2907 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_2906 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_1702 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_2187 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_1688 tRNA-OTHER K14225 tRNA-Gly; tRNA Gly
D AT01_2288 tRNA-His K14226 tRNA-His; tRNA His
D AT01_1563 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AT01_2337 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AT01_2160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AT01_2287 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3078 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3079 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_2967 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3760 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_144 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3654 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3822 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3821 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3819 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3820 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3757 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_3761 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1972 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1621 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1623 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_2968 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1622 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1767 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AT01_2877 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AT01_2286 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AT01_2599 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AT01_1078 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AT01_610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_612 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_3352 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_922 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_1138 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_1089 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AT01_2189 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AT01_2156 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AT01_2186 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AT01_2332 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AT01_531 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AT01_532 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AT01_2188 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AT01_3651 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_3653 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_3652 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_289 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_290 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_288 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_2577 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D AT01_3650 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AT01_3768 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AT01_3350 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AT01_665 threonyl and Alanyl tRNA synthetase second additional domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AT01_592 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AT01_949 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AT01_2538 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AT01_2539 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AT01_249 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AT01_982 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AT01_2061 beta-eliminating lyase family protein K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D AT01_2559 selA; L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D AT01_1374 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AT01_3964 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AT01_2781 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AT01_3014 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AT01_3743 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AT01_3131 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AT01_1703 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AT01_600 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AT01_1571 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AT01_3546 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AT01_253 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AT01_254 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AT01_316 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AT01_2706 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:yal03060]
D AT01_2769 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D AT01_2184 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D AT01_2966 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D AT01_1483 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D AT01_1482 secF; export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D AT01_1484 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D AT01_2513 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AT01_3208 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AT01_2400 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AT01_3207 secretion monitor family protein K13301 secM; secretion monitor
D AT01_3362 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AT01_2246 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AT01_2211 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D AT01_2210 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D AT01_2209 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D AT01_3730 tatA; twin arginine-targeting translocase, TatA/E family protein K03425 tatE; sec-independent protein translocase protein TatE
D AT01_3491 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AT01_3132 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:yal04122]
D AT01_3529 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AT01_3883 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AT01_2253 tusA; sulfurtransferase tusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AT01_2741 dsrH; sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D AT01_2740 tusC; sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D AT01_2739 tusD; sulfurtransferase tusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D AT01_923 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D AT01_856 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AT01_3861 moaE; molybdopterin synthase catalytic subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AT01_3858 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AT01_3860 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D AT01_3917 moeB; molybdopterin synthase sulfurylase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D AT01_3859 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AT01_3122 mog; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AT01_1472 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AT01_2174 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D AT01_2173 thiF family protein K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:yal03018]
D AT01_1644 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AT01_894 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D AT01_2305 DEAD/DEAH box helicase family protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D AT01_3275 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AT01_2975 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AT01_3868 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AT01_2921 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AT01_2977 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AT01_2265 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AT01_2303 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AT01_2391 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AT01_3125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D AT01_2888 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AT01_2914 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D AT01_3589 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AT01_3248 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:yal03030]
D AT01_793 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D AT01_3408 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AT01_1582 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AT01_1411 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AT01_880 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AT01_3741 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AT01_3084 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AT01_3015 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AT01_2518 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AT01_2125 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AT01_1970 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AT01_2120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AT01_3407 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AT01_1583 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AT01_2458 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AT01_3644 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AT01_2429 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:yal03410]
D AT01_467 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AT01_3474 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AT01_1764 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AT01_2414 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AT01_109 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AT01_2537 tag; DNA-3-methyladenine glycosylase I family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AT01_534 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AT01_1048 apurinic endonuclease family protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AT01_2458 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AT01_1705 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AT01_3644 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AT01_2429 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:yal03420]
D AT01_869 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AT01_2121 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D AT01_3851 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AT01_140 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D AT01_3465 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AT01_2274 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AT01_2458 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AT01_3644 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AT01_2429 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:yal03430]
D AT01_3302 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AT01_2912 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D AT01_1645 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D AT01_3465 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AT01_2274 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AT01_4004 hypothetical protein K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D AT01_3552 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AT01_1473 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AT01_796 exoX; exodeoxyribonuclease 10 K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D AT01_1705 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AT01_2120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AT01_1582 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AT01_2518 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AT01_1411 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AT01_3741 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AT01_880 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AT01_3408 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AT01_793 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D AT01_3015 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AT01_3084 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AT01_3644 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AT01_2429 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AT01_2703 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:yal03440]
D AT01_1705 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AT01_2120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AT01_2519 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D AT01_3494 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AT01_1409 recR; recombination protein RecR K06187 recR; recombination protein RecR
D AT01_3348 recA; protein RecA K03553 recA; recombination protein RecA
D AT01_2458 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AT01_588 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AT01_587 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AT01_589 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AT01_2434 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AT01_2579 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AT01_1627 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D AT01_1629 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D AT01_1626 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AT01_1582 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AT01_2518 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AT01_1411 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AT01_3741 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AT01_880 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AT01_3408 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AT01_793 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D AT01_3015 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AT01_3084 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AT01_2374 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AT01_1421 primosomal replication priB and priC family protein K04067 priC; primosomal replication protein N''
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:yal03250]
D AT01_2717 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:yal02010]
D AT01_3631 sulfate ABC transporter, sulfate-binding family protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AT01_2390 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D AT01_3632 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AT01_3633 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AT01_3634 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AT01_3839 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AT01_3840 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D AT01_3841 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AT01_3836 ABC transporter family protein K05776 modF; molybdate transport system ATP-binding protein
D AT01_16 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D AT01_3677 yfuA; yfuA K02012 afuA; iron(III) transport system substrate-binding protein
D AT01_15 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D AT01_3676 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D AT01_14 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AT01_3675 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AT01_3172 thiB; thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D AT01_3171 thiP; thiamine/thiamine pyrophosphate ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D AT01_3170 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D AT01_1019 potF; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D AT01_1016 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D AT01_1017 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D AT01_1018 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D AT01_3412 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AT01_3413 binding--dependent transport system inner membrane component family protein K02001 proW; glycine betaine/proline transport system permease protein
D AT01_3414 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D AT01_3886 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D AT01_3888 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D AT01_3890 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D AT01_3889 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AT01_2141 malE; maltose-binding periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D AT01_2142 binding--dependent transport system inner membrane component family protein K10109 malF; maltose/maltodextrin transport system permease protein
D AT01_2143 binding--dependent transport system inner membrane component family protein K10110 malG; maltose/maltodextrin transport system permease protein
D AT01_2140 malK; maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AT01_223 bacterial extracellular solute-binding family protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D AT01_226 binding--dependent transport system inner membrane component family protein K10193 togM; oligogalacturonide transport system permease protein
D AT01_225 binding--dependent transport system inner membrane component family protein K10194 togN; oligogalacturonide transport system permease protein
D AT01_224 ABC transporter family protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D AT01_2034 putative phospholipid-binding protein mlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D AT01_2035 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AT01_3685 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AT01_2036 putative phospholipid ABC transporter permease protein mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AT01_3683 ABC transport permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AT01_2033 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D AT01_2037 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AT01_3684 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AT01_2472 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D AT01_2473 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D AT01_2474 ccmA; heme ABC exporter, ATP-binding protein CcmA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AT01_2475 rbsD / FucU transport family protein K06726 rbsD; D-ribose pyranase [EC:5.4.99.62]
D AT01_451 periplasmic binding domain protein K10537 araF; L-arabinose transport system substrate-binding protein
D AT01_449 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein
D AT01_450 ABC transporter family protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D AT01_2331 ytfQ; ABC transporter periplasmic-binding protein ytfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein
D AT01_2327 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein
D AT01_2329 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein
D AT01_2330 ccmA; heme ABC exporter, ATP-binding protein CcmA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D AT01_3936 mglB; D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D AT01_3938 branched-chain amino acid transport system / permease component family protein K10541 mglC; methyl-galactoside transport system permease protein
D AT01_3937 ABC transporter family protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D AT01_2573 xylF; D-xylose ABC transporter, D-xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D AT01_2575 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D AT01_2574 xylG; D-xylose ABC transporter, ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D AT01_637 periplasmic binding domain protein K17213 K17213; inositol transport system substrate-binding protein
D AT01_635 branched-chain amino acid transport system / permease component family protein K17214 K17214; inositol transport system permease protein
D AT01_636 ccmA; heme ABC exporter, ATP-binding protein CcmA K17215 K17215; inositol transport system ATP-binding protein
D AT01_2229 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AT01_2228 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AT01_2227 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AT01_2226 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AT01_1495 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AT01_2497 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AT01_2498 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D AT01_3590 binding--dependent transport system inner membrane component family protein K02037 pstC; phosphate transport system permease protein
D AT01_2499 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AT01_3591 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AT01_2500 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AT01_3592 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AT01_3879 phnD; phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AT01_3880 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AT01_3881 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AT01_3878 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AT01_1205 hisM; histidine transport system permease protein hisM K10015 hisM; histidine transport system permease protein
D AT01_1206 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D AT01_1204 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D AT01_1207 hisJ; histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D AT01_3901 bacterial extracellular solute-binding s, 3 family protein K10036 glnH; glutamine transport system substrate-binding protein
D AT01_3900 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein
D AT01_3899 ABC transporter family protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D AT01_1013 artJ; ABC transporter arginine-binding protein 1 K09996 artJ; arginine transport system substrate-binding protein
D AT01_1010 lysine-arginine-ornithine-binding periplasmic family protein K09997 artI; arginine transport system substrate-binding protein
D AT01_1012 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09998 artM; arginine transport system permease protein
D AT01_1011 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09999 artQ; arginine transport system permease protein
D AT01_1009 artP; arginine transport ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D AT01_3748 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D AT01_3746 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D AT01_3747 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D AT01_3745 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D AT01_119 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AT01_120 yecS; inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein
D AT01_121 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D AT01_2240 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AT01_2239 livH; high-affinity branched-chain amino acid transport system permease protein livH K01997 livH; branched-chain amino acid transport system permease protein
D AT01_2238 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D AT01_2237 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AT01_2236 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AT01_1568 metQ; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D AT01_1567 metI; D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D AT01_1566 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AT01_3849 ABC transporter family protein K11963 urtE; urea transport system ATP-binding protein
D AT01_519 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AT01_345 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AT01_518 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D AT01_517 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D AT01_516 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D AT01_515 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AT01_2600 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D AT01_2601 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein
D AT01_2602 dppC; dipeptide transport system permease protein dppC K12370 dppC; dipeptide transport system permease protein
D AT01_2603 hypothetical protein K12371 dppD; dipeptide transport system ATP-binding protein
D AT01_2604 hypothetical protein K12372 dppF; dipeptide transport system ATP-binding protein
D AT01_329 bacterial extracellular solute-binding s, 5 Middle family protein K19226 sapA; cationic peptide transport system substrate-binding protein
D AT01_328 sapB; peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein
D AT01_327 sapC; peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein
D AT01_326 hypothetical protein K19229 sapD; cationic peptide transport system ATP-binding protein
D AT01_325 sapF; peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D AT01_1066 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D AT01_1067 yejB; inner membrane ABC transporter permease protein yejB K13894 yejB; microcin C transport system permease protein
D AT01_1068 yejE; inner membrane ABC transporter permease protein yejE K13895 yejE; microcin C transport system permease protein
D AT01_1069 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D AT01_1913 periplasmic binding family protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D AT01_1808 periplasmic binding family protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D AT01_1914 fecCD transport family protein K23186 fepD; iron-siderophore transport system permease protein
D AT01_1809 fecCD transport family protein K23186 fepD; iron-siderophore transport system permease protein
D AT01_1915 fecCD transport family protein K23187 fepG; iron-siderophore transport system permease protein
D AT01_1810 fecCD transport family protein K23187 fepG; iron-siderophore transport system permease protein
D AT01_1916 ABC transporter family protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D AT01_1811 ABC transporter family protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D AT01_3257 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D AT01_3258 fhuB; iron(3+)-hydroxamate import system permease protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D AT01_3256 fhuC; iron(3+)-hydroxamate import ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D AT01_3264 periplasmic binding family protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D AT01_257 fecCD transport family protein K06073 btuC; vitamin B12 transport system permease protein
D AT01_259 ABC transporter family protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D AT01_583 periplasmic solute binding family protein K09815 znuA; zinc transport system substrate-binding protein
D AT01_585 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D AT01_584 ABC transporter family protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AT01_241 periplasmic solute binding family protein K11604 sitA; manganese/iron transport system substrate-binding protein
D AT01_239 ABC 3 transport family protein K11605 sitC; manganese/iron transport system permease protein
D AT01_238 ABC 3 transport family protein K11606 sitD; manganese/iron transport system permease protein
D AT01_240 ABC transporter family protein K11607 sitB; manganese/iron transport system ATP-binding protein
D AT01_4053 cbiN; cobalt transport family protein K02009 cbiN; cobalt/nickel transport protein
D AT01_4052 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D AT01_4054 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D AT01_4055 cobalt ABC transporter, ATP-binding family protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D AT01_3043 lsrB; autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D AT01_3045 branched-chain amino acid transport system / permease component family protein K10556 lsrC; AI-2 transport system permease protein
D AT01_3044 branched-chain amino acid transport system / permease component family protein K10557 lsrD; AI-2 transport system permease protein
D AT01_3046 ccmA; heme ABC exporter, ATP-binding protein CcmA K10558 lsrA; AI-2 transport system ATP-binding protein
D AT01_3973 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D AT01_3974 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D AT01_866 lolE; liporeleasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D AT01_868 lolC; lipo-releasing system transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D AT01_867 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AT01_1248 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D AT01_1249 ccmC; heme exporter CcmC family protein K02195 ccmC; heme exporter protein C
D AT01_1250 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D AT01_1251 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AT01_3017 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AT01_3018 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AT01_2043 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AT01_2244 ftsX; putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D AT01_2245 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AT01_969 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AT01_1444 ABC transporter family protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AT01_1443 mdlB; multidrug resistance-like ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D AT01_1604 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D AT01_2656 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D AT01_3718 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D AT01_2351 type I secretion system ATPase family protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D AT01_990 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AT01_989 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AT01_3320 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D AT01_996 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:yal02060]
D AT01_3639 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AT01_3640 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AT01_3638 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AT01_878 ptsG; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AT01_3767 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AT01_443 PTS system, maltose and glucose-specific subfamily, IIC component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D AT01_3072 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AT01_3500 phosphotransferase system, EIIB family protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AT01_2054 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D AT01_32 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D AT01_2542 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D AT01_3451 chbA; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D AT01_3448 chbB; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AT01_3449 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D AT01_808 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D AT01_809 PTS system, mannose/fructose/sorbose, IIC component family protein K02795 manY; mannose PTS system EIIC component
D AT01_810 PTS system, mannose/fructose/sorbose, IID component family protein K02796 manZ; mannose PTS system EIID component
D AT01_3567 PTS system glucitol/sorbitol-specific IIA component family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D AT01_3568 srlE; glucitol/sorbitol-specific phosphotransferase enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D AT01_3569 srlA; glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D AT01_1195 ptsN1; phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AT01_1196 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AT01_1197 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D AT01_1051 phosphocarrier, HPr family protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D AT01_1049 PTS system, Fru family, IIB component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AT01_1050 pfkB; phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D AT01_1643 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D AT01_2048 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D AT01_2046 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:yal03070]
D AT01_1954 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D AT01_1849 hypothetical protein K03221 yscF; type III secretion protein F
D AT01_1120 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D AT01_1132 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D AT01_1117 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D AT01_1107 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D AT01_1106 type III secretion, HrpO family protein K03227 yscS; type III secretion protein S
D AT01_1105 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D AT01_1104 type III secretion, YscU/HrpY family protein K03229 yscU; type III secretion protein U
D AT01_1844 invA; invasion protein invA K03230 yscV; type III secretion protein V
D AT01_1112 type III secretion, HrcV family protein K03230 yscV; type III secretion protein V
D AT01_1111 ATPase, FliI/YscN family protein K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D AT01_1838 surface presentation of antigens family protein K03225 yscQ; type III secretion protein Q
D AT01_1108 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D AT01_1669 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D AT01_1670 type IV pilus biogenesis family protein K02452 gspC; general secretion pathway protein C
D AT01_1667 type II secretion system (T2SS), F family protein K02455 gspF; general secretion pathway protein F
D AT01_1666 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D AT01_1665 gspI; type II secretion system protein I K02458 gspI; general secretion pathway protein I
D AT01_1664 gspJ; type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D AT01_1663 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K
D AT01_1662 type II secretion system (T2SS), L family protein K02461 gspL; general secretion pathway protein L
D AT01_1668 epsE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AT01_1483 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D AT01_1482 secF; export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D AT01_2184 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D AT01_2966 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D AT01_2769 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D AT01_1484 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D AT01_2513 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AT01_3208 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AT01_3207 secretion monitor family protein K13301 secM; secretion monitor
D AT01_2246 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AT01_2400 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AT01_3362 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AT01_2211 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D AT01_2210 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D AT01_2209 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D AT01_3730 tatA; twin arginine-targeting translocase, TatA/E family protein K03425 tatE; sec-independent protein translocase protein TatE
D AT01_1866 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D AT01_4083 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D AT01_1882 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D AT01_4078 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D AT01_1875 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D AT01_4079 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D AT01_1868 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D AT01_4082 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D AT01_1873 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D AT01_4081 type VI secretion system peptidoglycan-associated domain protein K11892 impK; type VI secretion system protein ImpK
D AT01_1872 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D AT01_4071 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:yal02020]
D AT01_1496 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AT01_1497 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AT01_398 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AT01_1495 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AT01_2497 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AT01_861 phoQ; virulence sensor histidine kinase phoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D AT01_860 phoP; transcriptional regulatory protein phoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D AT01_2687 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AT01_2686 ompR; transcriptional regulatory protein ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D AT01_1139 ompC; outer membrane protein C K09475 ompC; outer membrane pore protein C
D AT01_950 gram-negative porin family protein K09476 ompF; outer membrane pore protein F
D AT01_2395 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D AT01_2394 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D AT01_1992 hypothetical protein K25864 mzrA; modulator protein MzrA
D AT01_386 HAMP domain protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D AT01_387 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D AT01_3267 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D AT01_1710 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D AT01_1711 hypothetical protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D AT01_3574 HAMP domain protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D AT01_3573 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D AT01_3577 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D AT01_3576 acrB/AcrD/AcrF family protein K07788 mdtB; multidrug efflux pump
D AT01_3575 acrB/AcrD/AcrF family protein K07789 mdtC; multidrug efflux pump
D AT01_3615 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18324 acrD; multidrug efflux pump
D AT01_2957 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D AT01_2958 hypothetical protein K07771 basR; two-component system, OmpR family, response regulator BasR
D AT01_260 beta-eliminating lyase family protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D AT01_65 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D AT01_66 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AT01_115 hypothetical protein K02406 fliC; flagellin
D AT01_116 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D AT01_67 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AT01_3783 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AT01_3782 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AT01_3786 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D AT01_3785 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D AT01_3784 kdpC; K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D AT01_1053 cytochrome c554 and c-prime family protein K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D AT01_2018 sensory box protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D AT01_3116 hypothetical protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D AT01_3161 HAMP domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AT01_3162 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D AT01_3165 tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein
D AT01_3164 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AT01_3163 tripartite tricarboxylate transporter receptor family protein K07795 tctC; putative tricarboxylic transport membrane protein
D AT01_2517 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AT01_3230 TonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D AT01_21 dpiB; sensor histidine kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D AT01_20 dpiA; transcriptional regulatory protein DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D AT01_22 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22]
D AT01_23 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein)
D AT01_24 citE; citrate (pro-3S)-lyase, beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D AT01_25 citF; citrate lyase, alpha subunit K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10]
D AT01_26 citX; holo-ACP synthase CitX K05964 citX; holo-ACP synthase [EC:2.7.7.61]
D AT01_27 citG; triphosphoribosyl-dephospho-CoA synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D AT01_28 citT; citrate carrier K09477 citT; citrate:succinate antiporter
D AT01_679 PAS fold family protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D AT01_680 response regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D AT01_3368 transporter, anaerobic C4-dicarboxylate uptake family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D AT01_3956 malic enzyme, NAD binding domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D AT01_653 HAMP domain protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D AT01_3617 bacterial regulatory s, luxR family protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D AT01_2899 frdA; fumarate reductase, flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AT01_2898 frdB; fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AT01_2897 frdC; fumarate reductase subunit C K00246 frdC; succinate dehydrogenase subunit C
D AT01_2896 frdD; fumarate reductase subunit D K00247 frdD; succinate dehydrogenase subunit D
D AT01_17 major Facilitator Superfamily protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D AT01_2598 phosphoglycerate transporter family protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D AT01_2597 histidine kinase family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D AT01_2596 uhpA; transcriptional regulatory protein uhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D AT01_18 histidine kinase family protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D AT01_19 bacterial regulatory s, luxR family protein K20264 fusR; two-component system, NarL family, response regulator FusR
D AT01_1569 putative protein rcsF K06080 rcsF; RcsF protein
D AT01_1143 rcsC Alpha-Beta-Loop family protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D AT01_1141 hpt domain protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D AT01_1142 rcsB; rcsB protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D AT01_3270 HAMP domain protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D AT01_139 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D AT01_3351 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D AT01_11 response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AT01_1280 hpt domain protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AT01_3826 hpt domain protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AT01_1279 evgA; positive transcription regulator evgA K07690 evgA; two-component system, NarL family, response regulator EvgA
D AT01_12 bvgA; virulence factors putative positive transcription regulator BvgA K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D AT01_1858 bacterial regulatory s, luxR family protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D AT01_3827 bacterial regulatory s, luxR family protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D AT01_1278 bacterial regulatory s, luxR family protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D AT01_3455 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D AT01_2311 hypothetical protein K07346 fimC; fimbrial chaperone protein
D AT01_2312 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2867 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2874 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_3712 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_8 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_4074 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_3581 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_1922 putative tight adherance operon protein K02279 cpaB; pilus assembly protein CpaB
D AT01_1923 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D AT01_1925 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D AT01_1926 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AT01_1927 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D AT01_1928 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D AT01_1599 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D AT01_3513 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D AT01_2453 glnL; nitrogen regulation protein NR K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AT01_2454 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D AT01_2452 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AT01_2615 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D AT01_2044 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D AT01_3509 HAMP domain protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D AT01_3511 sigma-54 interaction domain protein K07715 glrR; two-component system, NtrC family, response regulator GlrR
D AT01_1906 hybO; hydrogenase-2 small chain K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D AT01_1903 hybC; hydrogenase-2 large chain K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D AT01_74 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AT01_3775 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D AT01_2510 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D AT01_72 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AT01_2551 methyl-accepting chemotaxis (MCP) signaling domain protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D AT01_60 hypothetical protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D AT01_73 hypothetical protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D AT01_70 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D AT01_69 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AT01_76 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AT01_75 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AT01_2508 bacterial regulatory s, luxR family protein K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D AT01_2839 hpt domain protein K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D AT01_1134 HAMP domain protein K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D AT01_1135 bacterial regulatory s, luxR family protein K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D AT01_2838 bacterial regulatory s, luxR family protein K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D AT01_3745 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D AT01_3746 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D AT01_3747 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D AT01_3748 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D AT01_2722 bacterial regulatory s, crp family protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AT01_2425 enoyl-CoA hydratase/isomerase family protein K13816 rpfF; DSF synthase
D AT01_677 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AT01_1761 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D AT01_650 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AT01_3808 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AT01_651 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AT01_3809 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AT01_3810 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AT01_457 type I secretion system ATPase family protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D AT01_456 type I secretion membrane fusion, HlyD family protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D AT01_455 type I secretion system ATPase family protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D AT01_1954 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D AT01_2300 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AT01_2299 nucleotide sugar dehydrogenase family protein K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D AT01_82 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D AT01_2986 beta-eliminating lyase family protein K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:yal02024]
D AT01_3359 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D AT01_2914 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D AT01_497 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AT01_498 trpG; anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AT01_273 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AT01_3828 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AT01_3370 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AT01_3509 HAMP domain protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D AT01_3511 sigma-54 interaction domain protein K07715 glrR; two-component system, NtrC family, response regulator GlrR
D AT01_65 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D AT01_66 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AT01_3782 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AT01_18 histidine kinase family protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D AT01_19 bacterial regulatory s, luxR family protein K20264 fusR; two-component system, NarL family, response regulator FusR
D AT01_3043 lsrB; autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D AT01_3045 branched-chain amino acid transport system / permease component family protein K10556 lsrC; AI-2 transport system permease protein
D AT01_3044 branched-chain amino acid transport system / permease component family protein K10557 lsrD; AI-2 transport system permease protein
D AT01_3046 ccmA; heme ABC exporter, ATP-binding protein CcmA K10558 lsrA; AI-2 transport system ATP-binding protein
D AT01_3048 lsrK; autoinducer 2 kinase LsrK K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189]
D AT01_3047 lsrR; transcriptional regulator lsrR K11531 lsrR; lsr operon transcriptional repressor
D AT01_3042 hypothetical protein K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245]
D AT01_3041 lsrG; autoinducer 2-degrading protein lsrG K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32]
D AT01_2240 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AT01_2239 livH; high-affinity branched-chain amino acid transport system permease protein livH K01997 livH; branched-chain amino acid transport system permease protein
D AT01_2238 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D AT01_2237 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AT01_2236 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AT01_918 esaI; acyl-homoserine-lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184]
D AT01_917 bacterial regulatory s, luxR family protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D AT01_2425 enoyl-CoA hydratase/isomerase family protein K13816 rpfF; DSF synthase
D AT01_2424 diguanylate cyclase domain protein K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52]
D AT01_3185 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AT01_570 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AT01_2722 bacterial regulatory s, crp family protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AT01_2132 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D AT01_484 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AT01_1480 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AT01_519 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AT01_345 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AT01_518 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D AT01_517 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D AT01_516 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D AT01_515 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AT01_3429 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AT01_3009 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AT01_3430 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AT01_3008 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AT01_3431 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AT01_3007 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AT01_3006 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AT01_3432 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AT01_3433 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AT01_3005 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AT01_2513 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AT01_2184 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D AT01_2966 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D AT01_2769 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D AT01_1484 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D AT01_3208 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AT01_2246 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AT01_2400 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AT01_3362 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:yal02030]
D AT01_3775 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D AT01_2510 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D AT01_72 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AT01_2551 methyl-accepting chemotaxis (MCP) signaling domain protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D AT01_60 hypothetical protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D AT01_73 hypothetical protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D AT01_2141 malE; maltose-binding periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D AT01_2472 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D AT01_3936 mglB; D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D AT01_2600 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D AT01_69 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AT01_70 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D AT01_76 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AT01_77 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D AT01_75 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AT01_74 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AT01_106 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AT01_100 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AT01_99 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AT01_67 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AT01_68 motB; motility B domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:yal02040]
D AT01_108 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AT01_107 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AT01_106 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AT01_105 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D AT01_104 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AT01_103 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D AT01_102 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK
D AT01_101 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D AT01_1907 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D AT01_100 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AT01_99 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AT01_98 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AT01_97 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AT01_96 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AT01_95 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AT01_80 flhE; flagellar protein flhE K03516 flhE; flagellar protein FlhE
D AT01_79 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AT01_78 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AT01_83 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D AT01_84 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AT01_85 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AT01_86 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D AT01_87 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE
D AT01_88 flgF; flagellar basal-body rod protein flgF K02391 flgF; flagellar basal-body rod protein FlgF
D AT01_89 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AT01_90 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D AT01_91 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D AT01_92 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AT01_93 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D AT01_94 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D AT01_115 hypothetical protein K02406 fliC; flagellin
D AT01_114 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D AT01_113 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D AT01_112 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D AT01_67 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AT01_68 motB; motility B domain protein K02557 motB; chemotaxis protein MotB
D AT01_82 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D AT01_81 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D AT01_119 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AT01_117 fliZ; flagellar regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D AT01_1971 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AT01_65 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D AT01_66 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AT01_2044 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D AT01_116 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D AT01_3275 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:yal04980]
D AT01_235 LAO/AO transport system ATPase K07588 MMAA; GTPase [EC:3.6.5.-]
D AT01_236 hypothetical protein K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D AT01_2149 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
D AT01_417 invasin K13735 yeeJ; adhesin/invasin
D AT01_1259 invasin K13735 yeeJ; adhesin/invasin
D AT01_3220 lysM domain protein K13735 yeeJ; adhesin/invasin
D AT01_1795 bacterial Ig-like domain family protein K13735 yeeJ; adhesin/invasin
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells [PATH:yal05100]
D AT01_417 invasin K13735 yeeJ; adhesin/invasin
D AT01_1259 invasin K13735 yeeJ; adhesin/invasin
D AT01_3220 lysM domain protein K13735 yeeJ; adhesin/invasin
D AT01_1795 bacterial Ig-like domain family protein K13735 yeeJ; adhesin/invasin
D AT01_1830 invasion plasmid antigen IpaD family protein K13287 sipD; invasin D
D AT01_1832 secretion system effector C (SseC) like family protein K13285 sipB; invasin B
D AT01_2850 sopB; inositol phosphate phosphatase sopB K13085 ipgD; phosphatidylinositol-4,5-bisphosphate 4-phosphatase [EC:3.1.3.78]
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:yal01501]
D AT01_950 gram-negative porin family protein K09476 ompF; outer membrane pore protein F
D AT01_1139 ompC; outer membrane protein C K09475 ompC; outer membrane pore protein C
D AT01_1461 AmpG-like permease family protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AT01_873 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AT01_3455 ampC; beta-lactamase K01467 ampC; beta-lactamase class C [EC:3.5.2.6]
D AT01_519 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AT01_345 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AT01_518 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D AT01_517 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D AT01_516 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D AT01_515 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AT01_1426 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D AT01_1427 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D AT01_1954 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D AT01_2694 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AT01_3737 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AT01_3193 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AT01_816 ftsI; peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:yal01502]
D AT01_3201 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AT01_1521 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AT01_2124 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AT01_553 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AT01_3195 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D AT01_3196 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AT01_3199 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:yal01503]
D AT01_861 phoQ; virulence sensor histidine kinase phoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D AT01_860 phoP; transcriptional regulatory protein phoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D AT01_2595 hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D AT01_819 antimicrobial peptide resistance and lipid A acylation PagP family protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D AT01_260 beta-eliminating lyase family protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D AT01_261 glycosyltransferase like 2 family protein K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D AT01_262 3-beta hydroxysteroid dehydrogenase/isomerase family protein K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305]
D AT01_263 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D AT01_264 dolichyl-phosphate-mannose-mannosyltransferase family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D AT01_265 small Multidrug Resistance family protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D AT01_266 small Multidrug Resistance family protein K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF
D AT01_2957 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D AT01_2958 hypothetical protein K07771 basR; two-component system, OmpR family, response regulator BasR
D AT01_305 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AT01_329 bacterial extracellular solute-binding s, 5 Middle family protein K19226 sapA; cationic peptide transport system substrate-binding protein
D AT01_328 sapB; peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein
D AT01_327 sapC; peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein
D AT01_326 hypothetical protein K19229 sapD; cationic peptide transport system ATP-binding protein
D AT01_325 sapF; peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D AT01_2629 aprA; alkaline metalloproteinase K01406 prtC; serralysin [EC:3.4.24.40]
D AT01_2628 prtA; secreted protease A K01406 prtC; serralysin [EC:3.4.24.40]
D AT01_1572 hypothetical protein K06079 cutF; copper homeostasis protein (lipoprotein)
D AT01_2395 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D AT01_2394 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D AT01_1624 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AT01_2911 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AT01_285 L,D-transpeptidase catalytic domain protein K19236 ycfS; L,D-transpeptidase YcfS
D AT01_3267 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D AT01_2459 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AT01_3316 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AT01_2717 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AT01_1426 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D AT01_1427 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D AT01_1954 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D AT01_559 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AT01_1585 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:yal01000]
C 01001 Protein kinases [BR:yal01001]
D AT01_835 lipopolysaccharide kinase family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D AT01_2119 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AT01_175 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AT01_692 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D AT01_1496 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AT01_861 phoQ; virulence sensor histidine kinase phoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D AT01_2687 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AT01_386 HAMP domain protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D AT01_2395 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D AT01_1710 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D AT01_3574 HAMP domain protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D AT01_2957 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D AT01_3783 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AT01_2018 sensory box protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D AT01_3161 HAMP domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AT01_3637 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AT01_653 HAMP domain protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D AT01_2597 histidine kinase family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D AT01_18 histidine kinase family protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D AT01_1141 hpt domain protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D AT01_1143 rcsC Alpha-Beta-Loop family protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D AT01_3270 HAMP domain protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D AT01_11 response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AT01_1280 hpt domain protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AT01_3826 hpt domain protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AT01_21 dpiB; sensor histidine kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D AT01_679 PAS fold family protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D AT01_3665 5TMR of 5TMR-LYT family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D AT01_2659 5TMR of 5TMR-LYT family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D AT01_2453 glnL; nitrogen regulation protein NR K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AT01_3509 HAMP domain protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D AT01_69 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AT01_2839 hpt domain protein K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D AT01_1134 HAMP domain protein K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
C 01009 Protein phosphatases and associated proteins [BR:yal01009]
D AT01_2391 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AT01_1408 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
D AT01_3097 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:yal01002]
D AT01_3132 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AT01_1921 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AT01_1902 hybD; hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D AT01_3942 hycI; hydrogenase maturation peptidase HycI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51]
D AT01_3797 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D AT01_3554 guaA; GMP synthase glutamine-hydrolyzing K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AT01_1604 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D AT01_2656 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D AT01_1064 spr; lipoprotein spr K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D AT01_299 nlpC/P60 family protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D AT01_267 nlpC/P60 family protein K13695 nlpC; probable lipoprotein NlpC
D AT01_1209 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AT01_2020 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AT01_2495 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AT01_3762 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D AT01_1471 yajL; chaperone protein YajL K03152 thiJ; protein deglycase [EC:3.5.1.124]
D AT01_285 L,D-transpeptidase catalytic domain protein K19236 ycfS; L,D-transpeptidase YcfS
D AT01_955 L,D-transpeptidase catalytic domain protein K21470 ycbB; L,D-transpeptidase YcbB
D AT01_1266 CAAX protease self-immunity family protein K07052 K07052; CAAX protease family protein
D AT01_3835 CAAX protease self-immunity family protein K07052 K07052; CAAX protease family protein
D AT01_947 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AT01_2626 peptidase M3 family protein K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D AT01_2629 aprA; alkaline metalloproteinase K01406 prtC; serralysin [EC:3.4.24.40]
D AT01_2628 prtA; secreted protease A K01406 prtC; serralysin [EC:3.4.24.40]
D AT01_842 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AT01_1325 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AT01_1628 insulinase family protein K01407 ptrA; protease III [EC:3.4.24.55]
D AT01_2616 pqqL; insulinase family protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D AT01_3016 pepA; cytosol aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AT01_3536 peptidase family protein K07751 pepB; PepB aminopeptidase [EC:3.4.11.23]
D AT01_3612 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AT01_863 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D AT01_1519 pepD; Xaa-His dipeptidase family protein K01270 pepD; dipeptidase D [EC:3.4.13.-]
D AT01_582 lysM domain protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D AT01_1598 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AT01_2201 pepQ; xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D AT01_1722 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AT01_3285 peptidase M20/M25/M40 family protein K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-]
D AT01_385 carboxypeptidase Taq (M32) metallopeptidase family protein K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19]
D AT01_2963 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AT01_215 htpX; protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D AT01_1738 hypothetical protein K07387 K07387; metalloprotease [EC:3.4.24.-]
D AT01_3600 peptidase M48 family protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D AT01_1590 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D AT01_1233 penicillin-insensitive murein endopeptidase family protein K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D AT01_367 NFkB-p65-degrading zinc protease family protein K23655 nleC; T3SS secreted effector NleC
D AT01_34 glucose-regulated metallo-peptidase M90 family protein K09933 mtfA; MtfA peptidase
D AT01_383 trypsin family protein K04775 ydgD; protease YdgD [EC:3.4.21.-]
D AT01_3267 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D AT01_2029 peptidase Do family protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D AT01_2030 degS; periplasmic serine peptidase DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-]
D AT01_797 prolyl oligopeptidase family protein K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D AT01_3734 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AT01_1033 dacC; D-alanyl-D-alanine carboxypeptidase dacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AT01_3873 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AT01_1088 putative enzyme K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D AT01_2959 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AT01_370 clp protease family protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AT01_1456 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AT01_1454 lon; endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D AT01_937 hypothetical protein K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-]
D AT01_2133 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AT01_3491 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AT01_794 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AT01_214 prc; tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D AT01_540 sppA; signal peptide peptidase SppA, 67K type K04773 sppA; protease IV [EC:3.4.21.-]
D AT01_491 serine dehydrogenase ase family protein K04774 sohB; serine protease SohB [EC:3.4.21.-]
D AT01_2668 glpG; rhomboid family protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D AT01_2377 hslV; ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D AT01_1490 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AT01_3571 peptidase U32 family protein K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D AT01_2980 peptidase U32 family protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D AT01_2981 hypothetical protein K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D AT01_2070 pmbA; protein pmbA K03592 pmbA; PmbA protein
D AT01_2079 modulator of DNA gyrase family protein K03568 tldD; TldD protein
D AT01_1149 ecotin family protein K08276 eco; ecotin
D AT01_3538 alpha-2-macroglobulin family protein K06894 yfhM; alpha-2-macroglobulin
D AT01_2917 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D AT01_2916 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:yal01003]
D AT01_2664 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D AT01_2610 bcsA; cellulose synthase catalytic subunit UDP-forming K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D AT01_2016 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AT01_3539 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D AT01_3255 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D AT01_2694 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AT01_2291 glycosyltransferase, WecB/TagA/CpsF family protein K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D AT01_2293 4-alpha-L-fucosyltransferase glycosyl transferase group 56 family protein K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325]
D AT01_2302 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D AT01_911 glycosyl transferase 21 family protein K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-]
D AT01_1512 glycosyltransferase 36 associated family protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
D AT01_661 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:yal01005]
D AT01_559 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AT01_1585 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AT01_1584 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AT01_3205 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AT01_1587 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AT01_1376 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AT01_968 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AT01_905 lpxL; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AT01_581 msbB; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243]
D AT01_30 aspartyl/Asparaginyl beta-hydroxylase family protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D AT01_2110 lpxL; lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase family protein K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242]
D AT01_1063 yeiU; inner membrane protein yeiU K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29]
D AT01_2411 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AT01_264 dolichyl-phosphate-mannose-mannosyltransferase family protein K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43]
D AT01_819 antimicrobial peptide resistance and lipid A acylation PagP family protein K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251]
D AT01_305 hypothetical protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D AT01_2595 hypothetical protein K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42]
D AT01_616 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AT01_963 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AT01_2040 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AT01_2039 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AT01_2410 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AT01_2412 glycosyltransferase like 2 family protein K12984 waaE; (heptosyl)LPS beta-1,4-glucosyltransferase [EC:2.4.1.-]
D AT01_2409 waaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AT01_3049 rfaQ; putative lipopolysaccharide heptosyltransferase III K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D AT01_1534 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AT01_1565 gmhB; D,D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AT01_1960 rfaE1; bifunctional protein RfaE, domain I K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D AT01_2408 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AT01_1401 glycosyl transferase 4 family protein K13007 wbpL; glycosyltransferase WbpL [EC:2.4.1.-]
D AT01_2292 wzyE family protein K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27]
D AT01_2302 wecA; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:yal01011]
D AT01_2031 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AT01_2193 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AT01_3200 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AT01_3197 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AT01_3194 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D AT01_3201 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AT01_1521 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AT01_2124 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AT01_553 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AT01_2339 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AT01_3196 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AT01_3199 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AT01_1965 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AT01_1028 putative undecaprenyl-diphosphatase ybjG K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AT01_601 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AT01_2694 penicillin-binding, 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AT01_3255 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D AT01_3539 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D AT01_3737 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AT01_3193 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AT01_816 ftsI; peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AT01_3734 dacA; D-alanyl-D-alanine carboxypeptidase dacA K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AT01_1033 dacC; D-alanyl-D-alanine carboxypeptidase dacC K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AT01_2959 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AT01_1088 putative enzyme K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-]
D AT01_3873 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AT01_2016 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AT01_285 L,D-transpeptidase catalytic domain protein K19236 ycfS; L,D-transpeptidase YcfS
D AT01_955 L,D-transpeptidase catalytic domain protein K21470 ycbB; L,D-transpeptidase YcbB
D AT01_1233 penicillin-insensitive murein endopeptidase family protein K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D AT01_299 nlpC/P60 family protein K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-]
D AT01_1064 spr; lipoprotein spr K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D AT01_582 lysM domain protein K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-]
D AT01_842 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AT01_1325 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D AT01_3110 soluble lytic murein transglycosylase L domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AT01_1307 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AT01_1620 mltA; membrane-bound lytic murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D AT01_3678 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D AT01_563 lytic murein transglycosylase family protein K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D AT01_1766 hypothetical protein K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D AT01_3404 lysM domain protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D AT01_242 transglycosylase SLT domain protein K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29]
D AT01_3504 bacterial extracellular solute-binding s, 3 family protein K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29]
D AT01_882 yceG-like family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D AT01_3735 rlpA; rare lipoA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AT01_1624 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AT01_2911 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AT01_219 N-acetylmuramoyl-L-alanine amidase family protein K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AT01_3218 ampD; 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
D AT01_286 lpp; major outer membrane lipoprotein Lpp K06078 lpp; murein lipoprotein
C 01004 Lipid biosynthesis proteins [BR:yal01004]
D AT01_887 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AT01_888 fabH; 3-oxoacyl-[acyl-carrier-] synthase III family protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AT01_1228 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase 1 K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AT01_3397 hypothetical protein K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41]
D AT01_3322 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AT01_884 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AT01_3400 hypothetical protein K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AT01_3325 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_886 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_3399 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AT01_938 fabA; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14]
D AT01_1586 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AT01_2511 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D AT01_1381 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D AT01_1440 tesB; acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-]
D AT01_508 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D AT01_1450 tesC; long-chain acyl-CoA thioesterase tesC K12500 tesC; thioesterase III [EC:3.1.2.-]
D AT01_2836 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AT01_3185 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AT01_570 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AT01_2135 plsB; glycerol-3-phosphate O-acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D AT01_889 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AT01_1967 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AT01_1944 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:yal01008]
D AT01_29 4'-phosphopantetheinyl transferase superfamily protein K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-]
C 01006 Prenyltransferases [BR:yal01006]
D AT01_1474 ispA; farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AT01_2952 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AT01_1592 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AT01_2913 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AT01_2379 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D AT01_2136 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AT01_1467 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:yal01007]
D AT01_3650 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AT01_3768 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AT01_3250 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AT01_316 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AT01_2706 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AT01_1374 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AT01_600 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AT01_3964 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AT01_3131 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AT01_3014 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AT01_3743 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AT01_1703 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AT01_592 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AT01_949 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AT01_3546 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AT01_2538 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AT01_2539 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AT01_982 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AT01_1571 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AT01_249 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AT01_3350 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AT01_665 threonyl and Alanyl tRNA synthetase second additional domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AT01_253 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AT01_254 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AT01_951 aspC; aspartate aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1]
D AT01_2529 aminotransferase class I and II family protein K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66]
D AT01_1185 hypothetical protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AT01_3668 aminotransferase class I and II family protein K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D AT01_2123 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AT01_1545 cys/Met metabolism PLP-dependent enzyme family protein K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D AT01_3327 putative aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_3995 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AT01_2407 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D AT01_3846 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AT01_444 C-S lyase family protein K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AT01_2721 astC; succinylornithine transaminase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AT01_648 astC; succinylornithine transaminase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D AT01_3844 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AT01_3260 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AT01_2322 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AT01_975 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AT01_260 beta-eliminating lyase family protein K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87]
D AT01_2295 wecE; TDP-4-keto-6-deoxy-D-glucose transaminase family protein K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:yal00194]
D AT01_2493 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AT01_2492 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AT01_2491 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AT01_2490 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AT01_2489 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AT01_2488 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AT01_2487 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AT01_2486 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AT01_2485 ATP synthase I chain family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:yal03000]
D AT01_2008 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_413 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_738 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_448 helix-turn-helix domain protein K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D AT01_3106 helix-turn-helix domain protein K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR
D AT01_3105 helix-turn-helix domain protein K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
D AT01_3452 chbR; HTH-type transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon
D AT01_3113 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D AT01_4039 helix-turn-helix domain protein K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator
D AT01_2396 methylated-DNA--[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D AT01_1615 gcvA; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AT01_2318 bacterial regulatory helix-turn-helix, lysR family protein K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC
D AT01_2223 bacterial regulatory helix-turn-helix, lysR family protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D AT01_3128 nhaR; transcriptional activator protein nhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D AT01_2345 bacterial regulatory helix-turn-helix, lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D AT01_1729 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D AT01_3184 putative HTH-type transcriptional regulator leuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon
D AT01_488 cysB; HTH-type transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D AT01_2078 bacterial regulatory helix-turn-helix, lysR family protein K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
D AT01_2328 bacterial regulatory helix-turn-helix, lysR family protein K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator
D AT01_1030 deoR-like helix-turn-helix domain protein K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor
D AT01_2667 deoR-like helix-turn-helix domain protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D AT01_3333 bacterial regulatory s, gntR family protein K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator
D AT01_3564 deoR-like helix-turn-helix domain protein K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor
D AT01_39 bacterial regulatory s, gntR family protein K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor
D AT01_3935 helix-turn-helix family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AT01_1650 bacterial regulatory s, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AT01_2469 rbsR; ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AT01_2576 helix-turn-helix domain protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AT01_1886 bacterial regulatory s, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D AT01_2375 bacterial regulatory s, lacI family protein K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
D AT01_3188 fruR; fructose repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
D AT01_3070 D-fructose-responsive transcription factor family protein K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D AT01_2055 treR; trehalose operon repressor K03485 treR; LacI family transcriptional regulator, trehalose operon repressor
D AT01_296 bacterial regulatory s, lacI family protein K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor
D AT01_2647 gntR; HTH-type transcriptional regulator gntR K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
D AT01_442 bacterial regulatory s, lacI family protein K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein
D AT01_2998 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D AT01_640 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D AT01_556 fadR; fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
D AT01_3224 pdhR; pyruvate dehydrogenase complex repressor K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D AT01_1060 bacterial regulatory s, gntR family protein K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor
D AT01_1989 bacterial regulatory s, gntR family protein K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor
D AT01_1425 acrR; HTH-type transcriptional regulator AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D AT01_2420 slmA; HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator
D AT01_304 nemR; HTH-type transcriptional repressor nemR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AT01_2344 fabR; HTH-type transcriptional repressor fabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator
D AT01_3867 bacterial regulatory s, tetR family protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
D AT01_2481 asnC; regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D AT01_986 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AT01_54 asnC-type helix-turn-helix domain protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AT01_1681 asnC-type helix-turn-helix domain protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AT01_1445 asnC-type helix-turn-helix domain protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D AT01_917 bacterial regulatory s, luxR family protein K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR
D AT01_2671 malT; HTH-type transcriptional regulator malT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D AT01_311 winged helix DNA-binding domain protein K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D AT01_1550 winged helix DNA-binding domain protein K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D AT01_1388 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AT01_2776 zntR; Zn(II)-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA
D AT01_3772 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AT01_2132 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D AT01_2150 iclR; acetate operon repressor K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D AT01_218 kdgR; pectin degradation repressor protein kdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D AT01_2722 bacterial regulatory s, crp family protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AT01_394 fnr; fumarate and nitrate reduction regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D AT01_3528 iscR; iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D AT01_2920 nsrR; HTH-type transcriptional repressor nsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D AT01_631 bacterial regulatory, arsR family protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AT01_579 SIS domain protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D AT01_2192 birA; bifunctional protein BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D AT01_2099 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AT01_3111 trpR; trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor
D AT01_2949 winged helix-turn-helix DNA-binding family protein K07724 ner; Ner family transcriptional regulator
D AT01_2446 winged helix-turn-helix DNA-binding family protein K07724 ner; Ner family transcriptional regulator
D AT01_3175 bacterial extracellular solute-binding s, 5 Middle family protein K11925 sgrR; SgrR family transcriptional regulator
D AT01_3099 nadR; trifunctional NAD biosynthesis/regulator protein NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D AT01_2118 helix-turn-helix family protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D AT01_2561 helix-turn-helix family protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D AT01_780 helix-turn-helix family protein K22300 dicA; HTH-type transcriptional regulator, cell division transcriptional repressor
D AT01_3939 AAA domain family protein K15836 fhlA; formate hydrogenlyase transcriptional activator
D AT01_3837 molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein
D AT01_2372 met Apo-repressor, MetJ family protein K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor
D AT01_123 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AT01_3021 relB; antitoxin RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D AT01_1459 bolA; protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D AT01_1271 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AT01_760 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AT01_2206 rfaH; transcription elongation factor/antiterminator RfaH K05785 rfaH; transcriptional antiterminator RfaH
D AT01_2947 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D AT01_3764 marR family protein K02565 nagC; N-acetylglucosamine repressor
D AT01_432 ROK family protein K15545 mlc; transcriptional regulator of PTS gene
D AT01_2545 mtlR; mannitol operon repressor K02562 mtlR; mannitol operon repressor
D AT01_341 tyrR; transcriptional regulatory protein tyrR K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
D AT01_3603 gcvR; glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor
D AT01_332 pspF; psp operon transcriptional activator K03974 pspF; psp operon transcriptional activator
D AT01_335 pspC; phage shock protein C K03973 pspC; phage shock protein C
D AT01_3047 lsrR; transcriptional regulator lsrR K11531 lsrR; lsr operon transcriptional repressor
D AT01_3069 PAS fold family protein K05880 dhaR; transcriptional activator for dhaKLM operon
D AT01_2068 hypothetical protein K06140 rnk; regulator of nucleoside diphosphate kinase
D AT01_2582 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein
D AT01_3461 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein
D AT01_3698 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein
D AT01_1749 hypothetical protein K07735 algH; putative transcriptional regulator
D AT01_3251 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AT01_1481 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D AT01_1516 crl; sigma factor-binding protein crl K11926 crl; sigma factor-binding protein Crl
D AT01_779 cro; regulatory protein cro K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D AT01_3190 mraZ family protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:yal03021]
D AT01_2774 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AT01_2178 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AT01_2177 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AT01_2431 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AT01_1971 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AT01_3301 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D AT01_3484 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AT01_2243 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D AT01_2044 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D AT01_116 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D AT01_3166 rapA; RNA polymerase-associated protein rapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D AT01_2970 nusA; transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D AT01_1478 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D AT01_2183 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D AT01_2024 putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D AT01_2023 sspB; stringent starvation protein B K03600 sspB; stringent starvation protein B
D AT01_695 stage II sporulation E family protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D AT01_694 anti-anti-sigma factor family protein K04749 rsbV; anti-sigma B factor antagonist
D AT01_692 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D AT01_3485 rseA; sigma-E factor negative regulatory protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D AT01_3486 rseB; sigma-E factor regulatory protein rseB K03598 rseB; sigma-E factor negative regulatory protein RseB
D AT01_3487 rseC; sigma-E factor regulatory protein rseC K03803 rseC; sigma-E factor negative regulatory protein RseC
D AT01_3251 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AT01_2960 greA; transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D AT01_2685 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D AT01_2303 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AT01_1576 rof; protein rof K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:yal03019]
D AT01_894 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D AT01_2082 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AT01_3492 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AT01_2921 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AT01_2904 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AT01_2305 DEAD/DEAH box helicase family protein K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
D AT01_3868 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AT01_2977 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AT01_2265 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AT01_3275 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AT01_2975 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AT01_2303 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AT01_2391 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D AT01_3125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D AT01_2888 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AT01_2914 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D AT01_3589 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AT01_3248 pcnB; poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D AT01_1644 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AT01_3351 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D AT01_2087 EAL domain protein K18765 csrD; RNase E specificity factor CsrD
D AT01_2380 rraA; regulator of ribonuclease activity A K02553 rraA; regulator of ribonuclease activity A
D AT01_3012 rraB; regulator of ribonuclease activity B K09893 rraB; regulator of ribonuclease activity B
D AT01_2047 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
D AT01_360 hrpA; RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
D AT01_3254 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:yal03011]
D AT01_972 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AT01_1597 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AT01_2755 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AT01_2773 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AT01_2766 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AT01_2926 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AT01_2743 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AT01_2763 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AT01_2025 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AT01_2748 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AT01_2772 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AT01_2742 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AT01_2771 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AT01_2762 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D AT01_2974 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AT01_3363 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AT01_2758 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AT01_2927 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AT01_2753 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AT01_3129 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AT01_1969 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AT01_2181 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AT01_2752 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AT01_2749 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AT01_2750 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AT01_2761 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AT01_2764 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AT01_2928 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AT01_2180 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AT01_2182 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AT01_2179 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AT01_2026 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AT01_2759 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AT01_2768 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AT01_2756 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AT01_2775 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AT01_2765 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AT01_3366 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AT01_252 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AT01_2953 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AT01_2754 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AT01_2751 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AT01_2760 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AT01_2954 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AT01_2416 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AT01_2757 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AT01_2767 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AT01_2373 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AT01_1430 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AT01_890 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AT01_2415 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AT01_2516 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AT01_251 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AT01_1431 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AT01_2770 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AT01_1074 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D AT01_2155 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2464 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_1560 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_3381 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2832 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2334 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2194 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2157 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_3378 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2829 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2197 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2467 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2338 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2161 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_1564 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2831 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_1561 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2335 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2195 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_3380 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:yal03009]
D AT01_3492 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AT01_835 lipopolysaccharide kinase family protein K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1]
D AT01_2904 orn; oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AT01_3493 era; GTP-binding protein Era K03595 era; GTPase
D AT01_2956 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D AT01_3251 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AT01_2970 nusA; transcription elongation protein nusA K02600 nusA; transcription termination/antitermination protein NusA
D AT01_1478 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D AT01_2183 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D AT01_1072 rsuA; ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D AT01_3144 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AT01_2780 rsmB; 16S rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AT01_3083 methyltransferase small domain protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172]
D AT01_2247 rsmD; 16S rRNA methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D AT01_1747 rsmE; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AT01_2484 rsmG; 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AT01_3191 rsmH; 16S rRNA methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AT01_2011 rsmI; 16S rRNA methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AT01_2627 SAM-dependent methyltransferase family protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D AT01_815 rlmA; ribosomal RNA large subunit methyltransferase A K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D AT01_2922 RNA 2'-O ribose methyltransferase substrate binding family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AT01_2962 rrmJ; ribosomal RNA large subunit methyltransferase J K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D AT01_3898 hypothetical protein K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D AT01_1978 methyltransferase small domain protein K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D AT01_3738 rlmH; rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D AT01_925 rlmI; ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D AT01_2625 ribosomal RNA small subunit methyltransferase D, RsmJ family protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D AT01_943 THUMP domain protein K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173]
D AT01_1613 ftsJ-like methyltransferase family protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D AT01_3542 rlmN; 23S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D AT01_3271 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D AT01_1014 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]
D AT01_3149 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AT01_1084 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AT01_494 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D AT01_893 pseudouridine synthase, RluA family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D AT01_3375 rluD; ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AT01_854 pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D AT01_131 pseudouridine synthase family protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D AT01_1554 RNA 2'-O ribose methyltransferase substrate binding family protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D AT01_3085 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D AT01_604 rimJ; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D AT01_3364 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D AT01_977 ycaO-type kinase domain protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D AT01_2097 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D AT01_1235 prmB; (glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D AT01_3707 cupin superfamily protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D AT01_862 cupin superfamily protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D AT01_894 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D AT01_2082 rng; ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AT01_1750 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AT01_801 dbpA; ATP-independent RNA helicase dbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D AT01_2977 DEAD/DEAH box helicase family protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D AT01_3481 DEAD/DEAH box helicase family protein K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
D AT01_2903 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AT01_3549 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D AT01_2915 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D AT01_2826 telomere recombination family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AT01_2432 spoT; bifunctional (p)ppGpp synthase/hydrolase SpoT K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AT01_2972 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D AT01_2969 rimP; ribosome maturation factor rimP K09748 rimP; ribosome maturation factor RimP
D AT01_1373 hypothetical protein K14761 rlbA; ribosome-associated protein
D AT01_3739 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D AT01_3752 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor
D AT01_2961 yhbY; RNA-binding protein YhbY K07574 yhbY; RNA-binding protein
D AT01_2547 hypothetical protein K14762 yibL; ribosome-associated protein
D AT01_2071 hypothetical protein K09889 yjgA; ribosome-associated protein
D AT01_2045 raiA; ribosome-associated inhibitor A K05808 hpf; ribosome hibernation promoting factor
D AT01_3373 raiA; ribosome-associated inhibitor A K05809 raiA; ribosome-associated inhibitor A
D AT01_628 50S ribosome-binding GTPase family protein K06942 ychF; ribosome-binding ATPase
D AT01_891 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:yal03016]
D AT01_1964 poly A polymerase head domain protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AT01_3650 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AT01_1571 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AT01_3131 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AT01_3743 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AT01_3964 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AT01_3768 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AT01_600 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AT01_1703 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AT01_592 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AT01_3350 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AT01_665 threonyl and Alanyl tRNA synthetase second additional domain protein K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AT01_949 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D AT01_249 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AT01_982 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AT01_1374 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AT01_3014 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AT01_3546 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AT01_253 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AT01_254 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AT01_316 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AT01_2706 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AT01_2448 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D AT01_877 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AT01_1763 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D AT01_1570 tsaA; tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D AT01_1215 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AT01_2973 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D AT01_3297 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D AT01_3529 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AT01_2826 telomere recombination family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AT01_2913 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AT01_2512 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AT01_2483 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AT01_538 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AT01_2934 cysQ; 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D AT01_2515 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D AT01_301 rnt; ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-]
D AT01_2422 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D AT01_469 rnb; exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D AT01_569 rnd; ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5]
D AT01_3253 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D AT01_3108 ccmA; heme ABC exporter, ATP-binding protein CcmA K06020 ettA; energy-dependent translational throttle protein EttA
D AT01_2538 glyQ; glycyl-tRNA synthetase alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AT01_2539 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AT01_3250 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AT01_1391 ybaK; cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase ybaK K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D AT01_3503 cytidine and deoxycytidylate deaminase zinc-binding region family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D AT01_2129 dusA; tRNA dihydrouridine synthase A family protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D AT01_2098 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D AT01_3869 dihydrouridine synthase family protein K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-]
D AT01_3754 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D AT01_596 cmoA; tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D AT01_597 cmoB; tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D AT01_959 smtA; protein smtA K06219 smtA; tRNA 5-carboxymethoxyuridine methyltransferase [EC:2.1.1.-]
D AT01_2342 trmA; tRNA (uracil(54)-C(5))-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D AT01_3365 trmD; tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AT01_1554 RNA 2'-O ribose methyltransferase substrate binding family protein K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-]
D AT01_2433 trmH; tRNA guanosine-2'-O-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D AT01_3527 RNA methyltransferase, TrmH, group 1 family protein K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200]
D AT01_2397 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D AT01_3482 methyltransferase small domain protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D AT01_1607 RNA pseudouridylate synthase family protein K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D AT01_3149 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AT01_1084 RNA pseudouridylate synthase family protein K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AT01_856 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AT01_348 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D AT01_2253 tusA; sulfurtransferase tusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AT01_2741 dsrH; sulfur relay protein TusB/DsrH K07237 tusB; tRNA 2-thiouridine synthesizing protein B
D AT01_2740 tusC; sulfur relay protein TusC/DsrF K07236 tusC; tRNA 2-thiouridine synthesizing protein C
D AT01_2739 tusD; sulfurtransferase tusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-]
D AT01_923 tusE; sulfur relay, TusE/DsrC/DsvC family protein K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-]
D AT01_3531 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D AT01_1714 aminomethyltransferase folate-binding domain protein K06980 ygfZ; tRNA-modifying protein YgfZ
D AT01_1229 mnmC; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D AT01_1486 queA; tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D AT01_1449 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AT01_3279 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D AT01_3278 putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D AT01_1610 queF; queuine synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AT01_2908 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D AT01_1485 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D AT01_1472 thiI; tRNA sulfurtransferase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D AT01_1578 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D AT01_3609 tmcA; tRNA(Met) cytidine acetyltransferase TmcA K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193]
D AT01_572 yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AT01_1968 tsaD; tRNA threonylcarbamoyl adenosine modification protein TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D AT01_2910 tRNA threonylcarbamoyl adenosine modification protein YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AT01_1619 thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D AT01_2921 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AT01_2975 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AT01_2549 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D AT01_1819 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:yal03012]
D AT01_477 hypothetical protein K03113 EIF1; translation initiation factor 1
D AT01_2971 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AT01_250 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AT01_2731 miro-like family protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D AT01_1596 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D AT01_2185 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D AT01_2745 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D AT01_3330 fusA; translation elongation factor G K02355 fusA; elongation factor G
D AT01_2744 fusA; translation elongation factor G K02355 fusA; elongation factor G
D AT01_2560 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D AT01_620 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AT01_1594 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D AT01_619 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AT01_626 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D AT01_992 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AT01_2891 efp; translation elongation factor P K02356 efp; elongation factor P
D AT01_1057 yeiP; elongation factor P-like protein K02356 efp; elongation factor P
D AT01_2900 EF-P lysine aminoacylase GenX K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D AT01_2890 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-]
D AT01_1231 hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D AT01_1704 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D AT01_3086 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D AT01_2777 hypothetical protein K09890 arfA; alternative ribosome-rescue factor
D AT01_1573 RF-1 domain protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:yal03110]
D AT01_993 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D AT01_3377 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D AT01_1455 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D AT01_2378 hslU; ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D AT01_1408 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
D AT01_3125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D AT01_3533 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D AT01_3584 hsp70 family protein K04046 yegD; hypothetical chaperone protein
D AT01_2888 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AT01_3126 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AT01_1676 putative chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D AT01_3148 djlA; dnaJ-like protein djlA K05801 djlA; DnaJ like chaperone protein
D AT01_3532 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D AT01_2689 hslO; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D AT01_3473 grpE family protein K03687 GRPE; molecular chaperone GrpE
D AT01_2526 ibpA; small heat shock protein ibpA K04080 ibpA; molecular chaperone IbpA
D AT01_2527 hsp20/alpha crystallin family protein K04081 ibpB; molecular chaperone IbpB
D AT01_2690 S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D AT01_2887 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D AT01_3267 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D AT01_2963 ftsH; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AT01_2486 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AT01_2311 hypothetical protein K07346 fimC; fimbrial chaperone protein
D AT01_2400 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AT01_2393 cpxP; periplasmic protein CpxP K06006 cpxP; periplasmic protein CpxP/Spy
D AT01_3443 hdeB; hdeB domain protein K19778 hdeB; acid stress chaperone HdeB
D AT01_3953 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D AT01_1900 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D AT01_1899 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D AT01_3343 nitrate reductase delta subunit K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D AT01_3771 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D AT01_2717 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AT01_1375 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D AT01_1452 PPIC-type PPIASE domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D AT01_2737 domain amino terminal to FKBP-type peptidyl-prolyl isomerase family protein K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D AT01_2931 fklB; FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D AT01_3133 fkpB; FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D AT01_2735 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase slyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D AT01_2309 ppiC; peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D AT01_3146 PPIC-type PPIASE domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D AT01_2304 trxA; thioredoxin K03671 TXN; thioredoxin
D AT01_1555 trxA; thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D AT01_1383 putative thioredoxin protein K05838 ybbN; putative thioredoxin
D AT01_1022 grxA; glutaredoxin, GrxA family K03674 grxA; glutaredoxin 1
D AT01_2401 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D AT01_300 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D AT01_2459 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AT01_3316 DSBA-like thioredoxin domain protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AT01_558 disulfide bond formation DsbB family protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D AT01_1706 DSBA-like thioredoxin domain protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AT01_2882 cytochrome C biogenesis transmembrane region family protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D AT01_1245 dsbE; disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:yal04131]
D AT01_3541 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AT01_545 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AT01_3829 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AT01_287 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AT01_580 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AT01_1408 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:yal04121]
C 03051 Proteasome [BR:yal03051]
D AT01_1408 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:yal03032]
D AT01_3407 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AT01_2008 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_413 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_738 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_2165 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D AT01_1453 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D AT01_255 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D AT01_971 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D AT01_2517 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AT01_2125 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AT01_1970 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AT01_2120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AT01_1582 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AT01_2518 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AT01_3015 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AT01_3741 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AT01_880 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AT01_3408 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AT01_1411 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AT01_3084 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AT01_793 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D AT01_1583 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AT01_2458 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AT01_3644 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AT01_2429 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AT01_437 tus; DNA replication protein K10748 tus; DNA replication terminus site-binding protein
D AT01_2703 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AT01_3779 seqA; protein seqA K03645 seqA; negative modulator of initiation of replication
D AT01_3598 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D AT01_1144 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AT01_2520 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AT01_1945 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AT01_1949 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AT01_489 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AT01_537 topB; DNA topoisomerase 3 K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:yal03036]
D AT01_2008 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_413 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_738 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_3492 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AT01_524 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D AT01_2165 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D AT01_1453 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D AT01_255 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D AT01_971 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D AT01_1676 putative chaperone DnaJ K05516 cbpA; curved DNA-binding protein
D AT01_1675 cbpM; chaperone modulatory protein CbpM K18997 cbpM; chaperone modulatory protein CbpM
D AT01_3113 rob; right origin-binding protein K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator
D AT01_2517 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AT01_2014 SIS domain protein K12961 diaA; DnaA initiator-associating protein
D AT01_926 hemimethylated DNA binding domain protein K11940 hspQ; heat shock protein HspQ
D AT01_3903 dps; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D AT01_2099 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AT01_2914 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D AT01_1729 iciA; chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D AT01_986 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AT01_54 asnC-type helix-turn-helix domain protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AT01_1681 asnC-type helix-turn-helix domain protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AT01_1075 37-kD nucleoid-associated bacterial family protein K06899 ndpA; nucleoid-associated protein
D AT01_956 hypothetical protein K03632 mukB; chromosome partition protein MukB
D AT01_957 mukE; chromosome partition protein mukE K03804 mukE; chromosome partition protein MukE
D AT01_958 mukF; chromosome partition protein mukF K03633 mukF; chromosome partition protein MukF
D AT01_3203 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AT01_3294 ftsB; cell division protein ftsB K05589 ftsB; cell division protein FtsB
D AT01_2245 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AT01_3193 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AT01_816 ftsI; peptidoglycan synthase ftsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AT01_985 ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AT01_3192 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D AT01_2376 ftsN; cell division protein FtsN K03591 ftsN; cell division protein FtsN
D AT01_3202 ftsQ; cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D AT01_3198 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AT01_2244 ftsX; putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D AT01_3204 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AT01_3643 zipA; cell division protein ZipA K03528 zipA; cell division protein ZipA
D AT01_1724 zapA; cell division protein ZapA K09888 zapA; cell division protein ZapA
D AT01_2381 zapB; cell division protein ZapB K09892 zapB; cell division protein ZapB
D AT01_945 hypothetical protein K18657 zapC; cell division protein ZapC
D AT01_3211 hypothetical protein K18778 zapD; cell division protein ZapD
D AT01_2027 AFG1-like ATPase family protein K06916 zapE; cell division protein ZapE
D AT01_2930 hypothetical protein K07269 ytfB; cell division protein YtfB
D AT01_1624 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AT01_2911 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AT01_1426 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D AT01_566 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D AT01_567 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AT01_568 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D AT01_934 cell division inhibitor SulA family protein K13053 sulA; cell division inhibitor SulA
D AT01_2420 slmA; HTH-type protein slmA K05501 slmA; TetR/AcrR family transcriptional regulator
D AT01_3779 seqA; protein seqA K03645 seqA; negative modulator of initiation of replication
D AT01_2086 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D AT01_2085 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D AT01_2084 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D AT01_3736 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D AT01_1270 parA; plasmid partition protein A K03496 parA; chromosome partitioning protein
D AT01_1271 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AT01_760 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AT01_1945 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AT01_1949 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AT01_2483 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AT01_2484 rsmG; 16S rRNA methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AT01_2276 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D AT01_1707 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D AT01_1770 hypothetical protein K04763 xerD; integrase/recombinase XerD
D AT01_3965 4Fe-4S iron sulfur cluster binding s, NifH/frxC family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AT01_2457 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:yal03400]
D AT01_395 ogt; methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AT01_3789 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AT01_3474 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AT01_1764 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AT01_467 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AT01_3209 mutator mutT family protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AT01_1052 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AT01_2419 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AT01_2396 methylated-DNA--[]-cysteine S-methyltransferase family protein K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D AT01_365 FAD binding domain of DNA photolyase family protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D AT01_109 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AT01_2537 tag; DNA-3-methyladenine glycosylase I family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D AT01_2414 mutM; DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AT01_534 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AT01_1048 apurinic endonuclease family protein K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D AT01_2167 nfi; endonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D AT01_1705 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AT01_3644 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AT01_2429 NAD-dependent DNA ligase adenylation domain protein K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AT01_2458 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AT01_2121 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D AT01_3851 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AT01_140 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D AT01_3465 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AT01_2274 uvrD; DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AT01_2178 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AT01_2177 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AT01_2774 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AT01_2431 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AT01_869 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AT01_3302 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AT01_2912 mutL; DNA mismatch repair protein mutL K03572 mutL; DNA mismatch repair protein MutL
D AT01_1645 mutH; DNA mismatch repair endonuclease MutH K03573 mutH; DNA mismatch repair protein MutH
D AT01_4004 hypothetical protein K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1]
D AT01_3552 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AT01_1473 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AT01_796 exoX; exodeoxyribonuclease 10 K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D AT01_1582 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AT01_2518 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AT01_3015 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AT01_3741 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AT01_880 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AT01_3408 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AT01_1411 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AT01_3084 holD; DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7]
D AT01_793 holE; DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7]
D AT01_2120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AT01_2703 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AT01_414 vsr; very short patch repair protein K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
D AT01_1627 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D AT01_1629 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D AT01_1626 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D AT01_3348 recA; protein RecA K03553 recA; recombination protein RecA
D AT01_588 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AT01_587 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AT01_589 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AT01_2374 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AT01_1421 primosomal replication priB and priC family protein K04067 priC; primosomal replication protein N''
D AT01_1499 exonuclease SbcC family protein K03546 sbcC; DNA repair protein SbcC/Rad50
D AT01_1498 sbcD; exonuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D AT01_3098 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AT01_2519 recF; DNA replication and repair RecF family protein K03629 recF; DNA replication and repair protein RecF
D AT01_2434 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AT01_2579 divergent AAA domain protein K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AT01_3494 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AT01_1409 recR; recombination protein RecR K06187 recR; recombination protein RecR
D AT01_3471 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D AT01_1501 exonuclease, RdgC family protein K03554 rdgC; recombination associated protein RdgC
D AT01_1073 DEAD/DEAH box helicase family protein K19789 radD; DNA repair protein RadD
D AT01_2718 ftsK/SpoIIIE family protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D AT01_1144 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AT01_2520 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AT01_489 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D AT01_2165 hupA; DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha
D AT01_1453 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D AT01_2099 fis; DNA-binding protein fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AT01_255 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D AT01_971 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D AT01_2265 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AT01_524 hns; DNA-binding protein H-NS K03746 hns; DNA-binding protein H-NS
D AT01_1520 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D AT01_2133 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AT01_3167 DNA polymerase family B, exonuclease domain protein K02336 polB; DNA polymerase II [EC:2.7.7.7]
D AT01_897 dinI; DNA-damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I
D AT01_3349 recX family protein K03565 recX; regulatory protein
D AT01_2307 rep; ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D AT01_930 helD; helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4]
D AT01_3895 DEAD_2 family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D AT01_573 DEAD_2 family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D AT01_3416 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AT01_1146 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AT01_1147 nrdB; ribonucleoside-diphosphate reductase 1 subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AT01_3415 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:yal03029]
D AT01_2971 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AT01_250 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AT01_1596 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D AT01_2185 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D AT01_2745 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D AT01_3330 fusA; translation elongation factor G K02355 fusA; elongation factor G
D AT01_2744 fusA; translation elongation factor G K02355 fusA; elongation factor G
D AT01_3493 era; GTP-binding protein Era K03595 era; GTPase
D AT01_316 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AT01_3743 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AT01_592 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AT01_600 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AT01_2120 ssb; single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AT01_1589 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D AT01_3125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D AT01_3473 grpE family protein K03687 GRPE; molecular chaperone GrpE
D AT01_2888 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AT01_2887 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D AT01_3126 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AT01_3529 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AT01_3532 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D AT01_300 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D AT01_3965 4Fe-4S iron sulfur cluster binding s, NifH/frxC family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AT01_1467 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AT01_2513 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AT01_1408 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:yal02000]
D AT01_969 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AT01_1444 ABC transporter family protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D AT01_1443 mdlB; multidrug resistance-like ATP-binding protein MdlB K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D AT01_457 type I secretion system ATPase family protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D AT01_455 type I secretion system ATPase family protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D AT01_1604 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D AT01_2656 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D AT01_3718 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D AT01_834 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D AT01_2351 type I secretion system ATPase family protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D AT01_990 cydC; thiol reductant ABC exporter, CydC subunit K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AT01_989 cydD; thiol reductant ABC exporter, CydD subunit K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AT01_3320 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D AT01_996 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D AT01_942 ccmA; heme ABC exporter, ATP-binding protein CcmA K15738 uup; ABC transport system ATP-binding/permease protein
D AT01_3631 sulfate ABC transporter, sulfate-binding family protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AT01_2390 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D AT01_3632 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AT01_3633 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AT01_3634 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AT01_3839 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AT01_3840 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D AT01_3841 modC; molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AT01_3836 ABC transporter family protein K05776 modF; molybdate transport system ATP-binding protein
D AT01_16 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D AT01_3677 yfuA; yfuA K02012 afuA; iron(III) transport system substrate-binding protein
D AT01_15 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D AT01_3676 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D AT01_14 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AT01_3675 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AT01_3172 thiB; thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein K02064 thiB; thiamine transport system substrate-binding protein
D AT01_3171 thiP; thiamine/thiamine pyrophosphate ABC transporter, permease protein K02063 thiP; thiamine transport system permease protein
D AT01_3170 thiQ; thiamine ABC transporter, ATP-binding protein K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15]
D AT01_1019 potF; putrescine-binding periplasmic protein K11073 potF; putrescine transport system substrate-binding protein
D AT01_1016 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D AT01_1017 potH; putrescine transport system permease protein PotH K11075 potH; putrescine transport system permease protein
D AT01_1018 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D AT01_3412 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AT01_3413 binding--dependent transport system inner membrane component family protein K02001 proW; glycine betaine/proline transport system permease protein
D AT01_3414 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D AT01_3886 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D AT01_3888 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D AT01_3890 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D AT01_3889 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D AT01_2141 malE; maltose-binding periplasmic protein K10108 malE; maltose/maltodextrin transport system substrate-binding protein
D AT01_2142 binding--dependent transport system inner membrane component family protein K10109 malF; maltose/maltodextrin transport system permease protein
D AT01_2143 binding--dependent transport system inner membrane component family protein K10110 malG; maltose/maltodextrin transport system permease protein
D AT01_2140 malK; maltose/maltodextrin import ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AT01_451 periplasmic binding domain protein K10537 araF; L-arabinose transport system substrate-binding protein
D AT01_449 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein
D AT01_450 ABC transporter family protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D AT01_223 bacterial extracellular solute-binding family protein K10192 togB; oligogalacturonide transport system substrate-binding protein
D AT01_226 binding--dependent transport system inner membrane component family protein K10193 togM; oligogalacturonide transport system permease protein
D AT01_225 binding--dependent transport system inner membrane component family protein K10194 togN; oligogalacturonide transport system permease protein
D AT01_224 ABC transporter family protein K10195 togA; oligogalacturonide transport system ATP-binding protein
D AT01_3936 mglB; D-galactose-binding periplasmic protein K10540 mglB; methyl-galactoside transport system substrate-binding protein
D AT01_3938 branched-chain amino acid transport system / permease component family protein K10541 mglC; methyl-galactoside transport system permease protein
D AT01_3937 ABC transporter family protein K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11]
D AT01_2573 xylF; D-xylose ABC transporter, D-xylose-binding protein K10543 xylF; D-xylose transport system substrate-binding protein
D AT01_2575 branched-chain amino acid transport system / permease component family protein K10544 xylH; D-xylose transport system permease protein
D AT01_2574 xylG; D-xylose ABC transporter, ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10]
D AT01_2472 periplasmic binding domain protein K10439 rbsB; ribose transport system substrate-binding protein
D AT01_2473 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D AT01_2474 ccmA; heme ABC exporter, ATP-binding protein CcmA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D AT01_2331 ytfQ; ABC transporter periplasmic-binding protein ytfQ K23508 ytfQ; galactofuranose transport system substrate-binding protein
D AT01_2327 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein
D AT01_2329 branched-chain amino acid transport system / permease component family protein K23509 ytfT; galactofuranose transport system permease protein
D AT01_2330 ccmA; heme ABC exporter, ATP-binding protein CcmA K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D AT01_637 periplasmic binding domain protein K17213 K17213; inositol transport system substrate-binding protein
D AT01_635 branched-chain amino acid transport system / permease component family protein K17214 K17214; inositol transport system permease protein
D AT01_636 ccmA; heme ABC exporter, ATP-binding protein CcmA K17215 K17215; inositol transport system ATP-binding protein
D AT01_2229 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AT01_2228 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AT01_2227 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AT01_2226 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AT01_3043 lsrB; autoinducer 2-binding protein lsrB K10555 lsrB; AI-2 transport system substrate-binding protein
D AT01_3045 branched-chain amino acid transport system / permease component family protein K10556 lsrC; AI-2 transport system permease protein
D AT01_3044 branched-chain amino acid transport system / permease component family protein K10557 lsrD; AI-2 transport system permease protein
D AT01_3046 ccmA; heme ABC exporter, ATP-binding protein CcmA K10558 lsrA; AI-2 transport system ATP-binding protein
D AT01_2035 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AT01_3685 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AT01_2036 putative phospholipid ABC transporter permease protein mlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AT01_3683 ABC transport permease subunit K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AT01_2037 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AT01_3684 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AT01_3686 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D AT01_2034 putative phospholipid-binding protein mlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D AT01_2033 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D AT01_3962 periplasmic binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D AT01_2109 periplasmic binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D AT01_4011 periplasmic binding domain protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D AT01_2106 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D AT01_2107 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D AT01_3999 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D AT01_4008 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D AT01_4009 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D AT01_4010 ccmA; heme ABC exporter, ATP-binding protein CcmA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AT01_2108 ccmA; heme ABC exporter, ATP-binding protein CcmA K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AT01_4000 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D AT01_1495 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AT01_2497 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AT01_2498 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D AT01_3590 binding--dependent transport system inner membrane component family protein K02037 pstC; phosphate transport system permease protein
D AT01_2499 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AT01_3591 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AT01_2500 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AT01_3592 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AT01_3879 phnD; phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AT01_3880 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AT01_3881 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AT01_3878 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AT01_1205 hisM; histidine transport system permease protein hisM K10015 hisM; histidine transport system permease protein
D AT01_1206 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D AT01_1204 hisP; histidine transport ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D AT01_1207 hisJ; histidine-binding periplasmic protein K10014 hisJ; histidine transport system substrate-binding protein
D AT01_3901 bacterial extracellular solute-binding s, 3 family protein K10036 glnH; glutamine transport system substrate-binding protein
D AT01_3900 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein
D AT01_3899 ABC transporter family protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D AT01_1013 artJ; ABC transporter arginine-binding protein 1 K09996 artJ; arginine transport system substrate-binding protein
D AT01_1010 lysine-arginine-ornithine-binding periplasmic family protein K09997 artI; arginine transport system substrate-binding protein
D AT01_1012 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09998 artM; arginine transport system permease protein
D AT01_1011 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K09999 artQ; arginine transport system permease protein
D AT01_1009 artP; arginine transport ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1]
D AT01_3748 bacterial extracellular solute-binding s, 3 family protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D AT01_3746 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D AT01_3747 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D AT01_3745 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D AT01_119 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AT01_120 yecS; inner membrane amino-acid ABC transporter permease protein yecS K10009 tcyB; L-cystine transport system permease protein
D AT01_121 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D AT01_2240 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AT01_2239 livH; high-affinity branched-chain amino acid transport system permease protein livH K01997 livH; branched-chain amino acid transport system permease protein
D AT01_2238 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D AT01_2237 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AT01_2236 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AT01_1568 metQ; D-methionine-binding lipoprotein metQ K02073 metQ; D-methionine transport system substrate-binding protein
D AT01_1567 metI; D-methionine transport system permease protein metI K02072 metI; D-methionine transport system permease protein
D AT01_1566 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AT01_3849 ABC transporter family protein K11963 urtE; urea transport system ATP-binding protein
D AT01_2502 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AT01_3293 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AT01_2503 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D AT01_2505 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D AT01_3292 amino ABC transporter, permease, 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D AT01_3291 ABC transporter family protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AT01_519 oppA3; periplasmic oligopeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AT01_345 mppA; periplasmic murein peptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D AT01_518 oppB; oligopeptide transport system permease protein oppB K15581 oppB; oligopeptide transport system permease protein
D AT01_517 oppC; oligopeptide transport system permease protein oppC K15582 oppC; oligopeptide transport system permease protein
D AT01_516 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D AT01_515 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D AT01_2600 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D AT01_2601 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein
D AT01_2602 dppC; dipeptide transport system permease protein dppC K12370 dppC; dipeptide transport system permease protein
D AT01_2603 hypothetical protein K12371 dppD; dipeptide transport system ATP-binding protein
D AT01_2604 hypothetical protein K12372 dppF; dipeptide transport system ATP-binding protein
D AT01_329 bacterial extracellular solute-binding s, 5 Middle family protein K19226 sapA; cationic peptide transport system substrate-binding protein
D AT01_328 sapB; peptide transport system permease protein sapB K19227 sapB; cationic peptide transport system permease protein
D AT01_327 sapC; peptide transport system permease protein sapC K19228 sapC; cationic peptide transport system permease protein
D AT01_326 hypothetical protein K19229 sapD; cationic peptide transport system ATP-binding protein
D AT01_325 sapF; peptide transport system ATP-binding protein SapF K19230 sapF; cationic peptide transport system ATP-binding protein
D AT01_3429 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AT01_3009 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AT01_3430 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AT01_3008 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AT01_3431 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AT01_3007 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AT01_3006 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AT01_3432 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AT01_3433 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AT01_3005 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AT01_1066 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D AT01_1067 yejB; inner membrane ABC transporter permease protein yejB K13894 yejB; microcin C transport system permease protein
D AT01_1068 yejE; inner membrane ABC transporter permease protein yejE K13895 yejE; microcin C transport system permease protein
D AT01_1069 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D AT01_3257 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D AT01_3258 fhuB; iron(3+)-hydroxamate import system permease protein fhuB K23228 fhuB; ferric hydroxamate transport system permease protein
D AT01_3256 fhuC; iron(3+)-hydroxamate import ATP-binding protein FhuC K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D AT01_2846 hmuT; hemin-binding periplasmic protein hmuT K25132 hmuT; heme transport system substrate-binding protein
D AT01_270 hmuT; hemin-binding periplasmic protein hmuT K25132 hmuT; heme transport system substrate-binding protein
D AT01_2845 fecCD transport family protein K25133 hmuU; heme transport system permease protein
D AT01_2844 hmuV; hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D AT01_1913 periplasmic binding family protein K23185 fepB; ferric enterobactin transport system substrate-binding protein
D AT01_1808 periplasmic binding family protein K25286 fagD; iron-siderophore transport system substrate-binding protein
D AT01_1914 fecCD transport family protein K23186 fepD; iron-siderophore transport system permease protein
D AT01_1809 fecCD transport family protein K23186 fepD; iron-siderophore transport system permease protein
D AT01_1915 fecCD transport family protein K23187 fepG; iron-siderophore transport system permease protein
D AT01_1810 fecCD transport family protein K23187 fepG; iron-siderophore transport system permease protein
D AT01_1916 ABC transporter family protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D AT01_1811 ABC transporter family protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-]
D AT01_2853 periplasmic binding family protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D AT01_2855 fecCD transport family protein K25283 yclO; iron-siderophore transport system permease protein
D AT01_2854 fecCD transport family protein K25284 yclN; iron-siderophore transport system permease protein
D AT01_2856 ABC transporter family protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D AT01_3854 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AT01_1044 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AT01_3855 ABC 3 transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D AT01_1043 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D AT01_3856 hypothetical protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AT01_1042 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AT01_3264 periplasmic binding family protein K06858 btuF; vitamin B12 transport system substrate-binding protein
D AT01_257 fecCD transport family protein K06073 btuC; vitamin B12 transport system permease protein
D AT01_259 ABC transporter family protein K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8]
D AT01_583 periplasmic solute binding family protein K09815 znuA; zinc transport system substrate-binding protein
D AT01_585 ABC 3 transport family protein K09816 znuB; zinc transport system permease protein
D AT01_584 ABC transporter family protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D AT01_241 periplasmic solute binding family protein K11604 sitA; manganese/iron transport system substrate-binding protein
D AT01_239 ABC 3 transport family protein K11605 sitC; manganese/iron transport system permease protein
D AT01_238 ABC 3 transport family protein K11606 sitD; manganese/iron transport system permease protein
D AT01_240 ABC transporter family protein K11607 sitB; manganese/iron transport system ATP-binding protein
D AT01_4053 cbiN; cobalt transport family protein K02009 cbiN; cobalt/nickel transport protein
D AT01_4054 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D AT01_4052 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D AT01_4055 cobalt ABC transporter, ATP-binding family protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D AT01_1432 periplasmic solute binding family protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D AT01_1433 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D AT01_1434 ABC transporter family protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D AT01_3973 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D AT01_3974 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D AT01_3017 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AT01_3018 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AT01_2043 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AT01_3863 ybhR; inner membrane transport permease ybhR K25180 ybhR; drug efflux transport system permease protein
D AT01_3864 ABC-2 type transporter family protein K25181 ybhS; drug efflux transport system permease protein
D AT01_3865 ccmA; heme ABC exporter, ATP-binding protein CcmA K25182 ybhF; drug efflux transport system ATP-binding protein
D AT01_3866 efflux transporter, RND family, MFP subunit K25183 ybhG; membrane fusion protein YbhG
D AT01_866 lolE; liporeleasing system, transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D AT01_868 lolC; lipo-releasing system transmembrane protein lolC K09808 lolC_E; lipoprotein-releasing system permease protein
D AT01_867 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AT01_1248 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D AT01_1249 ccmC; heme exporter CcmC family protein K02195 ccmC; heme exporter protein C
D AT01_1250 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D AT01_1251 ccmA; heme ABC exporter, ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AT01_2244 ftsX; putative protein insertion permease FtsX K09811 ftsX; cell division transport system permease protein
D AT01_2245 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AT01_3242 yadH; inner membrane transport permease yadH K01992 ABC-2.P; ABC-2 type transport system permease protein
D AT01_3241 hypothetical protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AT01_1379 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AT01_3924 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AT01_671 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AT01_672 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D AT01_1380 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AT01_3922 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AT01_670 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AT01_281 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D AT01_446 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D AT01_291 mdtK; multidrug resistance protein mdtK K26939 norM; MATE family, multidrug efflux pump
D AT01_4088 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D AT01_31 MFS transporter, sugar porter family protein K06609 iolT; MFS transporter, SP family, major inositol transporter
D AT01_849 H+ symporter family protein K02532 lacY; MFS transporter, OHS family, lactose permease
D AT01_3337 fucP; H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D AT01_3179 setA; sugar efflux transporter A K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter
D AT01_4061 nucleoside H+ symporter family protein K11537 xapB; MFS transporter, NHS family, xanthosine permease
D AT01_3920 MFS transporter, metabolite:H+ symporter family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D AT01_3123 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D AT01_1891 proP; proline/betaine transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D AT01_1885 sugar (and other) transporter family protein K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D AT01_3663 major Facilitator Superfamily protein K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D AT01_1988 D-galactonate transporter family protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D AT01_1678 major Facilitator Superfamily protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D AT01_700 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D AT01_3523 lacY proton/sugar symporter family protein K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter
D AT01_2259 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D AT01_17 major Facilitator Superfamily protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D AT01_2598 phosphoglycerate transporter family protein K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC
D AT01_3259 narK; nitrite extrusion protein 1 K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D AT01_1648 major Facilitator Superfamily protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D AT01_1461 AmpG-like permease family protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AT01_552 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AT01_1071 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AT01_2385 major Facilitator Superfamily protein K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD
D AT01_2563 mdfA; multidrug transporter MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D AT01_907 sugar (and other) transporter family protein K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein
D AT01_605 major Facilitator Superfamily protein K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein
D AT01_1654 sugar (and other) transporter family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D AT01_654 sugar (and other) transporter family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D AT01_1553 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D AT01_3682 major Facilitator Superfamily protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D AT01_216 major Facilitator Superfamily protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D AT01_1395 fsr; fosmidomycin resistance protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D AT01_434 ynfM; inner membrane transport protein ynfM K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D AT01_981 major Facilitator Superfamily protein K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein
D AT01_2712 major Facilitator Superfamily protein K06141 tsgA; MFS transporter, TsgA protein
D AT01_3639 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AT01_1643 ptsP; phosphoenolpyruvate-protein phosphotransferase K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9]
D AT01_3640 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AT01_2048 ptsO; phosphocarrier protein NPr K08485 ptsO; phosphocarrier protein NPr
D AT01_1051 phosphocarrier, HPr family protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202]
D AT01_3638 crr; glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D AT01_878 ptsG; PTS system glucose-specific EIICB component K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199]
D AT01_3767 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D AT01_443 PTS system, maltose and glucose-specific subfamily, IIC component domain protein K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D AT01_3072 PTS system, sucrose-specific IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AT01_3500 phosphotransferase system, EIIB family protein K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D AT01_2054 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D AT01_1049 PTS system, Fru family, IIB component domain protein K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D AT01_32 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197]
D AT01_2542 mtlA; PTS system mannitol-specific EIICBA component K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197]
D AT01_3451 chbA; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D AT01_3448 chbB; N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D AT01_3449 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component
D AT01_3567 PTS system glucitol/sorbitol-specific IIA component family protein K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D AT01_3568 srlE; glucitol/sorbitol-specific phosphotransferase enzyme IIB component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D AT01_3569 srlA; glucitol/sorbitol permease IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D AT01_808 manX; PTS system mannose-specific EIIAB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D AT01_809 PTS system, mannose/fructose/sorbose, IIC component family protein K02795 manY; mannose PTS system EIIC component
D AT01_810 PTS system, mannose/fructose/sorbose, IID component family protein K02796 manZ; mannose PTS system EIID component
D AT01_1195 ptsN1; phosphotransferase enzyme II, A component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D AT01_1196 PTS system, Lactose/Cellobiose specific IIB subunit K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D AT01_1197 PTS system sugar-specific permease component family protein K03475 ulaA; ascorbate PTS system EIIC component
D AT01_2046 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D AT01_3062 dhaM; PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit dhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121]
D AT01_3896 MIP channel s family protein K06188 aqpZ; aquaporin Z
D AT01_2382 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D AT01_4038 MIP channel s family protein K27261 pduF; propanediol uptake facilitator
D AT01_3444 trkA-N domain protein K10716 kch; voltage-gated potassium channel
D AT01_1441 amt; ammonium transporter family protein K03320 amt; ammonium transporter, Amt family
D AT01_319 gstB; glutathione S-transferase GST-6.0 K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_2117 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_159 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_201 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_1040 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AT01_2024 putative stringent starvation protein A K03599 sspA; stringent starvation protein A
D AT01_978 focA; formate transporter FocA K06212 focA; formate transporter
D AT01_2708 putative nitrite transporter K02598 nirC; nitrite transporter
D AT01_2778 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D AT01_2841 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel
D AT01_1423 kefA; potassium efflux system KefA K05802 mscK; potassium-dependent mechanosensitive channel
D AT01_2901 mechanosensitive ion channel family protein K22051 mscM; miniconductance mechanosensitive channel
D AT01_1733 mscS; small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D AT01_920 mscM; miniconductance mechanosensitive channel K16053 ybdG; miniconductance mechanosensitive channel
D AT01_3586 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D AT01_3441 yut; urea transporter K08717 utp; urea transporter
D AT01_67 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AT01_68 motB; motility B domain protein K02557 motB; chemotaxis protein MotB
D AT01_1934 exbB; tonB-system energizer ExbB K03561 exbB; biopolymer transport protein ExbB
D AT01_1933 exbD; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D AT01_3813 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D AT01_3814 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D AT01_2269 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D AT01_347 corA-like Mg2+ transporter family protein K16074 zntB; zinc transporter
D AT01_3728 crcB; protein CrcB K06199 crcB; fluoride exporter
D AT01_3445 crcB-like family protein K06199 crcB; fluoride exporter
D AT01_3446 crcB-like family protein K06199 crcB; fluoride exporter
D AT01_2938 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AT01_3360 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AT01_950 gram-negative porin family protein K09476 ompF; outer membrane pore protein F
D AT01_3894 gram-negative porin family protein K11929 phoE; outer membrane pore protein E
D AT01_1139 ompC; outer membrane protein C K09475 ompC; outer membrane pore protein C
D AT01_2139 lamB; maltoporin K02024 lamB; maltoporin
D AT01_3073 scrY; sucrose porin K16077 scrY; sucrose porin
D AT01_935 ompA; outer membrane protein A K03286 TC.OOP; OmpA-OmpF porin, OOP family
D AT01_3907 ompX; outer membrane protein X K11934 ompX; outer membrane protein X
D AT01_1241 outer membrane transport family protein K06076 fadL; long-chain fatty acid transport protein
D AT01_2312 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2867 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2874 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_3712 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_8 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_4074 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_3581 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2589 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin
D AT01_3402 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin
D AT01_1889 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin
D AT01_1804 autotransporter beta-domain protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AT01_3230 TonB-dependent siderophore receptor family protein K19611 fepA; ferric enterobactin receptor
D AT01_2340 btuB; TonB-dependent vitamin B12 receptor K16092 btuB; vitamin B12 transporter
D AT01_2353 heme-binding A family protein K12545 hasA; heme acquisition protein HasA
D AT01_2354 heme-binding A family protein K12545 hasA; heme acquisition protein HasA
D AT01_2355 heme-binding A family protein K12545 hasA; heme acquisition protein HasA
D AT01_2356 heme-binding A family protein K12545 hasA; heme acquisition protein HasA
D AT01_2357 heme-binding A family protein K12545 hasA; heme acquisition protein HasA
D AT01_2358 hasR; hasR protein K16152 hasR; heme acquisition protein HasR
D AT01_1807 TonB-dependent siderophore receptor family protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D AT01_1041 tonB dependent receptor family protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D AT01_2848 shuA; outer membrane heme receptor ShuA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D AT01_272 shuA; outer membrane heme receptor ShuA K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D AT01_3853 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AT01_813 fcuA; ferrichrome receptor fcuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AT01_2714 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AT01_1918 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AT01_1954 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D AT01_1589 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D AT01_3548 yfgL; outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D AT01_3605 nlpB; lipoprotein 34 K07287 bamC; outer membrane protein assembly factor BamC
D AT01_3374 hypothetical protein K05807 bamD; outer membrane protein assembly factor BamD
D AT01_3470 smpA; small protein A K06186 bamE; outer membrane protein assembly factor BamE
D AT01_2940 surface antigen variable number repeat family protein K07278 tamA; translocation and assembly module TamA
D AT01_2941 hypothetical protein K09800 tamB; translocation and assembly module TamB
D AT01_222 kdgM; oligogalacturonate-specific porin kdgM K22110 kdgM; oligogalacturonate-specific porin family protein
D AT01_48 ompL; porin ompL K22110 kdgM; oligogalacturonate-specific porin family protein
D AT01_2042 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D AT01_2041 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D AT01_3147 lptD; LPS-assembly protein lptD K04744 lptD; LPS-assembly protein
D AT01_3742 lipopolysaccharide-assembly family protein K03643 lptE; LPS-assembly lipoprotein
D AT01_2613 tetratricopeptide repeat family protein K20543 bcsC; cellulose synthase operon protein C
D AT01_1832 secretion system effector C (SseC) like family protein K13285 sipB; invasin B
D AT01_1830 invasion plasmid antigen IpaD family protein K13287 sipD; invasin D
D AT01_1128 sseB; secreted effector sseB domain protein K15344 sseB; secreted effector protein SseB
D AT01_1126 sseC; secreted effector protein sseC K15345 sseC; secreted effector protein SseC
D AT01_1125 sseD; secreted effector protein sseD K15346 sseD; secreted effector protein SseD
D AT01_330 pertussis toxin, subunit 1 family protein K11023 ptxA; pertussis toxin subunit 1 [EC:2.4.2.-]
D AT01_3751 corC; magnesium and cobalt efflux protein CorC K06189 corC; hemolysin (HlyC) family protein
D AT01_3959 lrgA family protein K06518 cidA; holin-like protein
D AT01_2113 lrgA family protein K06518 cidA; holin-like protein
D AT01_4036 pduA; propanediol utilization protein PduA K27260 pduA; bacterial microcompartment shell protein
D AT01_1635 major Facilitator Superfamily protein K16210 togT; oligogalacturonide transporter
D AT01_1045 amino acid permease family protein K11733 lysP; lysine-specific permease
D AT01_820 amino acid permease family protein K11734 aroP; aromatic amino acid transport protein AroP
D AT01_3223 amino acid permease family protein K11734 aroP; aromatic amino acid transport protein AroP
D AT01_1493 amino acid permease family protein K11736 proY; proline-specific permease ProY
D AT01_129 cycA; D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D AT01_682 amino acid permease family protein K11738 ansP; L-asparagine permease
D AT01_2592 amino acid permease family protein K16234 hutT; histidine transporter
D AT01_3679 amino acid permease family protein K14052 puuP; putrescine importer
D AT01_2985 potE; putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter
D AT01_389 putative arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D AT01_3051 transporter, basic amino acid/polyamine antiporter family protein K03758 arcD; arginine:ornithine antiporter / lysine permease
D AT01_830 transporter, basic amino acid/polyamine antiporter family protein K03758 arcD; arginine:ornithine antiporter / lysine permease
D AT01_3825 cation diffusion facilitator transporter family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D AT01_2392 fieF; ferrous-iron efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF
D AT01_1427 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D AT01_3615 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18324 acrD; multidrug efflux pump
D AT01_3576 acrB/AcrD/AcrF family protein K07788 mdtB; multidrug efflux pump
D AT01_3575 acrB/AcrD/AcrF family protein K07789 mdtC; multidrug efflux pump
D AT01_351 small Multidrug Resistance family protein K03297 emrE; small multidrug resistance pump
D AT01_2894 sugE; quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D AT01_575 small Multidrug Resistance family protein K11742 mdtI; spermidine export protein MdtI
D AT01_576 small Multidrug Resistance family protein K11743 mdtJ; spermidine export protein MdtJ
D AT01_3781 eamA-like transporter family protein K08978 TC.BAT1; bacterial/archaeal transporter family protein
D AT01_3906 rhtA; inner membrane transporter rhtA K11939 rhtA; inner membrane transporter RhtA
D AT01_3107 RhaT L-rhamnose-proton symporter family protein K02856 rhaT; L-rhamnose-H+ transport protein
D AT01_2268 eamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD
D AT01_265 small Multidrug Resistance family protein K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE
D AT01_427 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D AT01_2648 gntT; high-affinity gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter
D AT01_2884 dcuA; anaerobic C4-dicarboxylate transporter dcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D AT01_3368 transporter, anaerobic C4-dicarboxylate uptake family protein K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D AT01_656 chaA; calcium/proton exchanger family protein K07300 chaA; Ca2+:H+ antiporter
D AT01_2038 sodium/calcium exchanger family protein K07301 yrbG; cation:H+ antiporter
D AT01_2633 phosphate transporter family protein K16322 pit; low-affinity inorganic phosphate transporter
D AT01_2096 panF; sodium/pantothenate symporter K14392 panF; sodium/pantothenate symporter
D AT01_124 putP; sodium/proline symporter K11928 putP; sodium/proline symporter
D AT01_2834 actP; cation/acetate symporter ActP K14393 actP; cation/acetate symporter
D AT01_2837 dicarboxylate symporter family protein K11102 gltP; proton glutamate symport protein
D AT01_2615 dctA; aerobic C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D AT01_1983 dicarboxylate symporter family protein K07862 sstT; serine/threonine transporter
D AT01_2435 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D AT01_3127 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D AT01_557 nhaB; Na+/H+ antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family
D AT01_3689 na+/H+ antiporter family protein K18218 tet35; tetracycline resistance efflux pump
D AT01_2115 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D AT01_915 trkA-C domain protein K11105 cvrA; potassium/hydrogen antiporter
D AT01_2733 transporter, monovalent cation:proton antiporter-2 family protein K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D AT01_2732 NADPH-dependent FMN reductase family protein K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG
D AT01_1396 ybaL; inner membrane protein ybaL K26735 KEA4_5_6; K+:H+ antiporter
D AT01_2199 potassium uptake, TrkH family protein K03498 trkH; trk/ktr system potassium uptake protein
D AT01_2779 trkA; trk system potassium uptake protein trkA K03499 trkA; trk/ktr system potassium uptake protein
D AT01_3036 permease for cytosine/purine, uracil, thiamine, allantoin family protein K10974 codB; cytosine permease
D AT01_3037 permease for cytosine/purine, uracil, thiamine, allantoin family protein K10974 codB; cytosine permease
D AT01_3597 uracil-xanthine permease family protein K02824 uraA; uracil permease
D AT01_2436 pbuX; xanthine permease family protein K16345 xanP; xanthine permease XanP
D AT01_2116 putative permease yjcD K06901 pbuG; adenine/guanine/hypoxanthine permease
D AT01_2506 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D AT01_3655 nucleoside transporter, NupC family protein K11535 nupC; nucleoside transport protein
D AT01_1155 aromatic amino acid transport family protein K03834 tyrP; tyrosine-specific transport protein
D AT01_1056 aromatic amino acid transport family protein K03835 mtr; tryptophan-specific transport protein
D AT01_1031 stp; serine transporter family protein K03837 sdaC; serine transporter
D AT01_2859 stp; serine transporter family protein K03838 tdcC; threonine transporter
D AT01_28 citT; citrate carrier K09477 citT; citrate:succinate antiporter
D AT01_3261 clcA; H(+)/Cl(-) exchange transporter ClcA K03281 clcA; chloride channel protein, CIC family
D AT01_430 clcB; voltage-gated ClC-type chloride channel ClcB K03281 clcA; chloride channel protein, CIC family
D AT01_3442 transition metal uptake transporter, Ni2+-Co2+ transporter family protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D AT01_615 sulP; sulfate permease family protein K03321 TC.SULP; sulfate permease, SulP family
D AT01_3656 mntH; manganese transport protein mntH K03322 mntH; manganese transport protein
D AT01_1888 pNaS; sodium-dependent inorganic phosphate (Pi) transporter family protein K03324 yjbB; phosphate:Na+ symporter
D AT01_630 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D AT01_3969 transporter, anaerobic C4-dicarboxylate uptake C family protein K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family
D AT01_2294 wzxE; protein wzxE K16693 wzxE; enterobacterial common antigen flippase
D AT01_601 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AT01_2224 membrane transport family protein K13936 mdcF; malonate transporter and related proteins
D AT01_3550 membrane transport family protein K13936 mdcF; malonate transporter and related proteins
D AT01_2476 kup; potassium uptake protein K03549 kup; KUP system potassium uptake protein
D AT01_1731 lysE; L-lysine exporter family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D AT01_2263 rhtB; homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D AT01_2264 homoserine/Threonine efflux family protein K05835 rhtC; threonine efflux protein
D AT01_3138 lysE type translocator family protein K05835 rhtC; threonine efflux protein
D AT01_1548 ygaZ; inner membrane protein YgaZ K26605 azlC; branched chain amino acid efflux pump
D AT01_1549 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump
D AT01_3165 tripartite tricarboxylate transporter TctA family protein K07793 tctA; putative tricarboxylic transport membrane protein
D AT01_3164 tripartite tricarboxylate transporter TctB family protein K07794 tctB; putative tricarboxylic transport membrane protein
D AT01_3163 tripartite tricarboxylate transporter receptor family protein K07795 tctC; putative tricarboxylic transport membrane protein
D AT01_2075 fusaric acid resistance family protein K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB
D AT01_3159 fusaric acid resistance family protein K15547 mdtO; multidrug resistance protein MdtO
D AT01_3601 hypothetical protein K03548 perM; putative permease
D AT01_2254 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D AT01_243 marC integral membrane family protein K05595 marC; multiple antibiotic resistance protein
D AT01_3198 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D AT01_812 hypothetical protein K23242 mntP; manganese efflux pump family protein
D AT01_675 iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter
D AT01_125 iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter
D AT01_126 imelysin family protein K07224 efeO; iron uptake system component EfeO
D AT01_127 Dyp-type peroxidase family protein K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-]
D AT01_674 fe2+ transport family protein K07230 p19; periplasmic iron binding protein
D AT01_3525 high-affinity nickel-transport family protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D AT01_2349 hypothetical protein K03832 tonB; periplasmic protein TonB
D AT01_509 hypothetical protein K03832 tonB; periplasmic protein TonB
D AT01_3817 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D AT01_3815 tolA; protein TolA K03646 tolA; colicin import membrane protein
D AT01_1353 hypothetical protein K03646 tolA; colicin import membrane protein
D AT01_3816 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D AT01_1222 cytochrome C biogenesis transmembrane region family protein K08344 scsB; suppressor for copper-sensitivity B
D AT01_3340 dmsA; anaerobic dimethyl sulfoxide reductase chain A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3]
D AT01_3341 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B
D AT01_3342 DMSO reductase anchor subunit family protein K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C
D AT01_1053 cytochrome c554 and c-prime family protein K03532 torC; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
D AT01_1054 molybdopterin guanine dinucleotide-containing S/N-oxide reductases family protein K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3]
D AT01_1552 efflux pump membrane family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D AT01_3158 efflux transporter, RND family, MFP subunit K15549 mdtN; membrane fusion protein, multidrug efflux system
D AT01_2350 type I secretion membrane fusion, HlyD family protein K12537 hasE; membrane fusion protein, type I secretion system
D AT01_456 type I secretion membrane fusion, HlyD family protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D AT01_2655 cvaA; colicin V secretion protein CvaA K13408 cvaA; membrane fusion protein
D AT01_1426 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D AT01_3838 hypothetical protein K25859 acrZ; accessory protein, multidrug efflux pump
D AT01_3577 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D AT01_3319 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D AT01_997 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D AT01_2076 efflux transporter, RND family, MFP subunit K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA
D AT01_3824 pnuC; nicotinamide mononucleotide transporter PnuC family protein K03811 pnuC; nicotinamide mononucleotide transporter
D AT01_2681 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D AT01_2680 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D AT01_2679 feoC; ferrous iron transport protein C K07490 feoC; ferrous iron transport protein C
D AT01_2632 uspB; universal stress protein B K06144 uspB; universal stress protein B
D AT01_2892 entericidin EcnA/B family protein K16348 ecnB; entericidin B
D AT01_1246 ccmF; cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D AT01_352 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D AT01_61 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D AT01_790 copper resistance D family protein K07245 pcoD; copper resistance protein D
D AT01_791 copC domain protein K07156 copC; copper resistance protein C
D AT01_547 mipA; mltA-interacting protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:yal02044]
D AT01_1954 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D AT01_457 type I secretion system ATPase family protein K12530 rtxB; ATP-binding cassette, subfamily B, bacterial RtxB
D AT01_455 type I secretion system ATPase family protein K12531 rtxE; ATP-binding cassette, subfamily B, bacterial RtxE
D AT01_456 type I secretion membrane fusion, HlyD family protein K12532 rtxD; membrane fusion protein, RTX toxin transport system
D AT01_2351 type I secretion system ATPase family protein K12536 hasD; ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
D AT01_2350 type I secretion membrane fusion, HlyD family protein K12537 hasE; membrane fusion protein, type I secretion system
D AT01_2655 cvaA; colicin V secretion protein CvaA K13408 cvaA; membrane fusion protein
D AT01_1604 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D AT01_2656 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D AT01_1670 type IV pilus biogenesis family protein K02452 gspC; general secretion pathway protein C
D AT01_1669 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D AT01_1668 epsE; general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AT01_1667 type II secretion system (T2SS), F family protein K02455 gspF; general secretion pathway protein F
D AT01_1666 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D AT01_1665 gspI; type II secretion system protein I K02458 gspI; general secretion pathway protein I
D AT01_1664 gspJ; type II secretion system protein J K02459 gspJ; general secretion pathway protein J
D AT01_1663 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K
D AT01_1662 type II secretion system (T2SS), L family protein K02461 gspL; general secretion pathway protein L
D AT01_3543 pilF; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D AT01_1753 twitching motility family protein K02669 pilT; twitching motility protein PilT
D AT01_1921 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AT01_1922 putative tight adherance operon protein K02279 cpaB; pilus assembly protein CpaB
D AT01_1923 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D AT01_1925 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D AT01_1926 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AT01_1927 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D AT01_1928 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D AT01_1929 tetratricopeptide repeat family protein K12512 tadD; tight adherence protein D
D AT01_1930 tadE-like family protein K12513 tadE; tight adherence protein E
D AT01_1931 putative tight adherance operon protein K12514 tadF; tight adherence protein F
D AT01_1932 von Willebrand factor type A domain protein K12515 tadG; tight adherence protein G
D AT01_1640 hypothetical protein K02679 ppdA; prepilin peptidase dependent protein A
D AT01_1639 hypothetical protein K02680 ppdB; prepilin peptidase dependent protein B
D AT01_1637 hypothetical protein K02681 ppdC; prepilin peptidase dependent protein C
D AT01_3216 hypothetical protein K02682 ppdD; prepilin peptidase dependent protein D
D AT01_3215 type II/IV secretion system family protein K02504 hofB; protein transport protein HofB
D AT01_3214 type II secretion system (T2SS), F family protein K02505 hofC; protein transport protein HofC
D AT01_2695 putative ATPases of the HSP70 class involved in cell division K12288 hofM; pilus assembly protein HofM
D AT01_2696 fimbrial assembly family protein K12289 hofN; pilus assembly protein HofN
D AT01_2697 putative membrane protein K12290 hofO; pilus assembly protein HofO
D AT01_2698 hypothetical protein K12291 hofP; pilus assembly protein HofP
D AT01_2699 pilQ; type IV pilus secretin PilQ family protein K02507 hofQ; protein transport protein HofQ
D AT01_1756 YGGT family protein K02221 yggT; YggT family protein
D AT01_1451 competence ComEA helix-hairpin-helix repeat region domain protein K02237 comEA; competence protein ComEA
D AT01_970 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D AT01_1132 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D AT01_1131 type III secretion apparatus protein, YscD/HrpQ family K03220 yscD; type III secretion protein D
D AT01_1849 hypothetical protein K03221 yscF; type III secretion protein F
D AT01_1120 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D AT01_1117 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D AT01_1111 ATPase, FliI/YscN family protein K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D AT01_1838 surface presentation of antigens family protein K03225 yscQ; type III secretion protein Q
D AT01_1108 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D AT01_1107 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D AT01_1106 type III secretion, HrpO family protein K03227 yscS; type III secretion protein S
D AT01_1105 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D AT01_1104 type III secretion, YscU/HrpY family protein K03229 yscU; type III secretion protein U
D AT01_1844 invA; invasion protein invA K03230 yscV; type III secretion protein V
D AT01_1112 type III secretion, HrcV family protein K03230 yscV; type III secretion protein V
D AT01_1846 type III secretion outer membrane pore, YscC/HrcC family K22504 invG; type III secretion system outer membrane ring protein
D AT01_1851 type III secretion apparatus lipoprotein, YscJ/HrcJ family K22505 prgK; type III secretion system inner membrane ring protein
D AT01_1842 putative ATP synthase SpaL K22506 spaL; type III secretion system ATPase [EC:7.4.2.8]
D AT01_1837 epaP; type III secretion apparatus protein, YscR/HrcR family K22507 spaP; type III secretion system export apparatus protein
D AT01_1836 type III secretion, HrpO family protein K22508 spaQ; type III secretion system export apparatus protein
D AT01_1835 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K22509 spaR; type III secretion system export apparatus protein
D AT01_1834 spaS; surface presentation of antigens protein spaS K22510 spaS; type III secretion system export apparatus switch protein
D AT01_1845 type III secretion regulator YopN/LcrE/InvE/MxiC K22511 invE; type III secretion system protein
D AT01_1843 invasion B family protein K22512 spaK; type III secretion system chaperone
D AT01_1848 type III secretion system PrgH-EprH family protein K22488 prgH; type III secretion system protein
D AT01_1850 type III secretion needle MxiH like family protein K22487 prgJ; type III secretion system protein
D AT01_79 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AT01_78 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AT01_107 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AT01_105 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D AT01_104 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AT01_99 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AT01_98 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AT01_97 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AT01_96 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AT01_95 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AT01_1706 DSBA-like thioredoxin domain protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AT01_2589 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin
D AT01_3402 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin
D AT01_1889 outer membrane autotransporter barrel domain protein K12678 aidA-I; autotransporter family porin
D AT01_1804 autotransporter beta-domain protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AT01_1868 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D AT01_4082 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D AT01_1873 type IV/VI secretion system, DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D AT01_4081 type VI secretion system peptidoglycan-associated domain protein K11892 impK; type VI secretion system protein ImpK
D AT01_1874 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D AT01_4080 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D AT01_1877 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D AT01_4069 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D AT01_1878 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D AT01_4070 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D AT01_4086 lysozyme family protein K11897 impF; type VI secretion system protein ImpF
D AT01_1880 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D AT01_4077 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D AT01_1881 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D AT01_4076 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D AT01_4068 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D AT01_1882 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D AT01_4078 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D AT01_1866 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D AT01_4083 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D AT01_1879 lysozyme family protein K11905 K11905; type VI secretion system protein
D AT01_1875 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D AT01_4079 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D AT01_1872 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D AT01_4071 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D AT01_1869 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D AT01_1867 hypothetical protein K11911 vasL; type VI secretion system protein VasL
D AT01_1876 putative fHA domain protein K11894 impI; type VI secretion system protein ImpI
D AT01_4085 impE family protein K11898 impE; type VI secretion system protein ImpE
D AT01_1870 hypothetical protein K11909 vasI; type VI secretion system protein VasI
D AT01_2310 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_2872 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_3713 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_1274 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_1277 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_10 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_4072 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_3583 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_2311 hypothetical protein K07346 fimC; fimbrial chaperone protein
D AT01_2312 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2867 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2874 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_3712 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_8 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_4074 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_3581 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2870 fimbrial family protein K07348 fimF; minor fimbrial subunit
D AT01_1276 hypothetical protein K12518 papC; outer membrane usher protein PapC
D AT01_3309 hypothetical protein K12518 papC; outer membrane usher protein PapC
D AT01_3310 hypothetical protein K12519 papD; chaperone protein PapD
D AT01_1275 hypothetical protein K12519 papD; chaperone protein PapD
D AT01_3208 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AT01_2400 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AT01_1483 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D AT01_2184 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D AT01_1482 secF; export membrane protein secF K03074 secF; preprotein translocase subunit SecF
D AT01_2966 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D AT01_3207 secretion monitor family protein K13301 secM; secretion monitor
D AT01_2769 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D AT01_3362 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AT01_2246 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AT01_1484 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D AT01_2513 yidC; membrane protein insertase K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AT01_2211 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D AT01_2210 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D AT01_2209 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D AT01_3730 tatA; twin arginine-targeting translocase, TatA/E family protein K03425 tatE; sec-independent protein translocase protein TatE
C 02042 Bacterial toxins [BR:yal02042]
D AT01_330 pertussis toxin, subunit 1 family protein K11023 ptxA; pertussis toxin subunit 1 [EC:2.4.2.-]
D AT01_2938 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AT01_3360 CBS domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D AT01_1715 hypothetical protein K11068 hlyIII; hemolysin III
D AT01_838 GDSL-like Lipase/Acylhydrolase family protein K11018 tlh; thermolabile hemolysin
C 02022 Two-component system [BR:yal02022]
D AT01_1496 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AT01_1497 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AT01_861 phoQ; virulence sensor histidine kinase phoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D AT01_860 phoP; transcriptional regulatory protein phoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D AT01_2687 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AT01_2686 ompR; transcriptional regulatory protein ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D AT01_386 HAMP domain protein K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3]
D AT01_387 response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA
D AT01_2395 cpxA; sensor protein CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3]
D AT01_2394 cpxR; transcriptional regulatory protein CpxR K07662 cpxR; two-component system, OmpR family, response regulator CpxR
D AT01_1710 HAMP domain protein K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3]
D AT01_1711 hypothetical protein K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB
D AT01_3574 HAMP domain protein K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3]
D AT01_3573 response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR
D AT01_2957 HAMP domain protein K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3]
D AT01_2958 hypothetical protein K07771 basR; two-component system, OmpR family, response regulator BasR
D AT01_3783 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AT01_3782 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AT01_2018 sensory box protein K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3]
D AT01_3116 hypothetical protein K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA
D AT01_3161 HAMP domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AT01_3162 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D AT01_3637 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AT01_653 HAMP domain protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D AT01_3617 bacterial regulatory s, luxR family protein K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP
D AT01_2597 histidine kinase family protein K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D AT01_2596 uhpA; transcriptional regulatory protein uhpA K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA
D AT01_18 histidine kinase family protein K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3]
D AT01_19 bacterial regulatory s, luxR family protein K20264 fusR; two-component system, NarL family, response regulator FusR
D AT01_1143 rcsC Alpha-Beta-Loop family protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D AT01_1141 hpt domain protein K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3]
D AT01_1142 rcsB; rcsB protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D AT01_3270 HAMP domain protein K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D AT01_139 uvrY; response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D AT01_11 response regulator K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AT01_1280 hpt domain protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AT01_3826 hpt domain protein K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3]
D AT01_1279 evgA; positive transcription regulator evgA K07690 evgA; two-component system, NarL family, response regulator EvgA
D AT01_12 bvgA; virulence factors putative positive transcription regulator BvgA K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D AT01_1858 bacterial regulatory s, luxR family protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D AT01_3827 bacterial regulatory s, luxR family protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D AT01_1278 bacterial regulatory s, luxR family protein K07688 fimZ; two-component system, NarL family, response regulator, fimbrial Z protein, FimZ
D AT01_21 dpiB; sensor histidine kinase DpiB K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3]
D AT01_20 dpiA; transcriptional regulatory protein DpiA K07702 dpiA; two-component system, CitB family, response regulator CitB
D AT01_679 PAS fold family protein K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3]
D AT01_680 response regulator K07703 dcuR; two-component system, CitB family, response regulator DcuR
D AT01_3665 5TMR of 5TMR-LYT family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D AT01_2659 5TMR of 5TMR-LYT family protein K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D AT01_3369 response regulator K02477 K02477; two-component system, LytTR family, response regulator
D AT01_3664 ypdB; response regulator K02477 K02477; two-component system, LytTR family, response regulator
D AT01_2453 glnL; nitrogen regulation protein NR K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D AT01_2454 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D AT01_3509 HAMP domain protein K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3]
D AT01_3511 sigma-54 interaction domain protein K07715 glrR; two-component system, NtrC family, response regulator GlrR
D AT01_69 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AT01_76 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AT01_75 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AT01_2508 bacterial regulatory s, luxR family protein K13041 ttrR; two-component system, LuxR family, response regulator TtrR
D AT01_2839 hpt domain protein K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D AT01_1134 HAMP domain protein K14978 ssrA; two-component system, LuxR family, secretion system sensor histidine kinase SsrA
D AT01_1135 bacterial regulatory s, luxR family protein K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D AT01_2838 bacterial regulatory s, luxR family protein K14979 ssrB; two-component system, LuxR family, secretion system response regulator SsrB
D AT01_526 response regulator K02485 rssB; two-component system, response regulator
C 02035 Bacterial motility proteins [BR:yal02035]
D AT01_69 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AT01_70 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D AT01_74 cheR; chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AT01_75 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AT01_76 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AT01_77 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D AT01_3775 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D AT01_2510 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D AT01_72 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AT01_2551 methyl-accepting chemotaxis (MCP) signaling domain protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor
D AT01_60 hypothetical protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor
D AT01_73 hypothetical protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor
D AT01_105 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D AT01_104 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AT01_103 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D AT01_98 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AT01_97 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AT01_96 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AT01_95 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AT01_79 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AT01_78 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AT01_80 flhE; flagellar protein flhE K03516 flhE; flagellar protein FlhE
D AT01_106 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AT01_100 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AT01_99 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AT01_107 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AT01_91 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D AT01_83 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D AT01_90 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D AT01_101 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D AT01_1907 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D AT01_108 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AT01_102 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK
D AT01_84 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AT01_85 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AT01_86 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D AT01_88 flgF; flagellar basal-body rod protein flgF K02391 flgF; flagellar basal-body rod protein FlgF
D AT01_89 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AT01_92 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AT01_87 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE
D AT01_93 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D AT01_94 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D AT01_81 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D AT01_115 hypothetical protein K02406 fliC; flagellin
D AT01_114 fliD; flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D AT01_113 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D AT01_112 fliT; flagellar protein FliT K02423 fliT; flagellar protein FliT
D AT01_65 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D AT01_66 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AT01_116 fliA; RNA polymerase sigma factor for flagellar operon K02405 fliA; RNA polymerase sigma factor FliA
D AT01_67 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AT01_68 motB; motility B domain protein K02557 motB; chemotaxis protein MotB
D AT01_119 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D AT01_117 fliZ; flagellar regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ
D AT01_82 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D AT01_1753 twitching motility family protein K02669 pilT; twitching motility protein PilT
D AT01_3543 pilF; type IV pilus biogenesis/stability protein PilW K02656 pilF; type IV pilus assembly protein PilF
D AT01_1921 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AT01_1922 putative tight adherance operon protein K02279 cpaB; pilus assembly protein CpaB
D AT01_1923 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D AT01_1925 hypothetical protein K02282 cpaE; pilus assembly protein CpaE
D AT01_1926 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AT01_2310 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_2872 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_3713 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_1274 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_1277 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_10 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_4072 putative fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_3583 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D AT01_2311 hypothetical protein K07346 fimC; fimbrial chaperone protein
D AT01_2312 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2867 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2874 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_3712 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_8 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_4074 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_3581 hypothetical protein K07347 fimD; outer membrane usher protein
D AT01_2870 fimbrial family protein K07348 fimF; minor fimbrial subunit
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:yal04812]
D AT01_2086 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D AT01_3204 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AT01_3203 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AT01_566 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D AT01_567 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AT01_568 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D AT01_1270 parA; plasmid partition protein A K03496 parA; chromosome partitioning protein
D AT01_1271 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AT01_760 parB-like nuclease domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:yal04147]
D AT01_1408 hsp90 family protein K04079 HSP90A; molecular chaperone HtpG
D AT01_3275 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AT01_545 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AT01_1735 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AT01_287 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AT01_580 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AT01_2717 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D AT01_1488 hypothetical protein K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D AT01_2888 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AT01_3125 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D AT01_2145 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AT01_3553 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AT01_2185 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D AT01_2745 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D AT01_877 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AT01_446 hypothetical protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D AT01_3185 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AT01_570 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AT01_1407 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AT01_1419 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AT01_2360 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AT01_4087 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AT01_1035 cys/Met metabolism PLP-dependent enzyme family protein K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D AT01_3688 metC; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D AT01_2944 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AT01_3832 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D AT01_2661 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D AT01_2383 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AT01_2452 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D AT01_2207 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AT01_398 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D AT01_1726 ACT domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AT01_2162 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AT01_2348 pyridine nucleotide-disulfide oxidoreductase family protein K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_3227 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AT01_578 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D AT01_2389 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AT01_3829 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AT01_2895 lipocalin-like domain protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:yal02048]
D AT01_3024 hsdR; type I site-specific deoxyribonuclease, HsdR family protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D AT01_3025 type I restriction modification DNA specificity domain protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AT01_3026 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AT01_2703 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D AT01_2008 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_413 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_738 dcm; DNA (cytosine-5-)-methyltransferase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AT01_1290 putative hNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D AT01_1489 hok/gef family protein K18921 hokB; protein HokB
D AT01_3022 relE; mRNA interferase RelE K06218 relE; mRNA interferase RelE/StbE
D AT01_3021 relB; antitoxin RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D AT01_2119 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AT01_175 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AT01_2118 helix-turn-helix family protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D AT01_2561 helix-turn-helix family protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D AT01_3670 hypothetical protein K18843 hicB; antitoxin HicB
D AT01_1437 hha; hemolysin expression-modulating protein K05839 hha; haemolysin expression modulating protein
D AT01_1436 biofilm formation regulator YbaJ family protein K19162 tomB; hha toxicity modulator TomB
D AT01_335 pspC; phage shock protein C K03973 pspC; phage shock protein C
D AT01_334 pspB; phage shock protein B K03970 pspB; phage shock protein B
D AT01_1269 plasmid stabilization system family protein K19092 parE1_3_4; toxin ParE1/3/4
D AT01_1268 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D AT01_2549 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D AT01_1819 PIN domain protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D AT01_2548 antidote-toxin recognition MazE family protein K18829 mvpT; antitoxin VapB
D AT01_1820 antidote-toxin recognition MazE family protein K18829 mvpT; antitoxin VapB
D AT01_3010 hypothetical protein K19334 tabA; biofilm protein TabA
D AT01_898 bssS family protein K12148 bssS; biofilm regulator BssS
D AT01_3204 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AT01_2086 mreB; rod shape-determining protein mreB K03569 mreB; rod shape-determining protein MreB and related proteins
D AT01_1945 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AT01_1949 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AT01_3650 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AT01_1712 hypothetical protein K19168 cptA; toxin CptA
D AT01_1713 flavinator of succinate dehydrogenase family protein K09159 cptB; antitoxin CptB
D AT01_3529 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:yal01504]
D AT01_3689 na+/H+ antiporter family protein K18218 tet35; tetracycline resistance efflux pump
D AT01_2563 mdfA; multidrug transporter MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein
D AT01_3682 major Facilitator Superfamily protein K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein
D AT01_861 phoQ; virulence sensor histidine kinase phoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3]
D AT01_860 phoP; transcriptional regulatory protein phoP K07660 phoP; two-component system, OmpR family, response regulator PhoP
D AT01_1426 acrA; acriflavine resistance protein A K03585 acrA; membrane fusion protein, multidrug efflux system
D AT01_1427 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D AT01_1388 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AT01_1954 type I secretion outer membrane, TolC family protein K12340 tolC; outer membrane protein
D AT01_1279 evgA; positive transcription regulator evgA K07690 evgA; two-component system, NarL family, response regulator EvgA
D AT01_950 gram-negative porin family protein K09476 ompF; outer membrane pore protein F
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:yal00536]
D AT01_3029 hypothetical protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:yal00537]
D AT01_398 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:yal03200]
D AT01_1324 bacteriophage Rz lysis family protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:yal03100]
D AT01_3648 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_3649 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_1562 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_2159 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_2336 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AT01_2289 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_1371 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_3353 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_3355 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_3354 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_1254 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AT01_5 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AT01_13 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AT01_33 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AT01_3409 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AT01_2333 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AT01_3382 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AT01_143 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AT01_3756 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AT01_3758 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AT01_3759 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AT01_2196 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AT01_2830 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AT01_3379 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AT01_2466 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AT01_142 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_2905 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_2907 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_2906 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_1702 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_2187 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AT01_1688 tRNA-OTHER K14225 tRNA-Gly; tRNA Gly
D AT01_2288 tRNA-His K14226 tRNA-His; tRNA His
D AT01_1563 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AT01_2337 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AT01_2160 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AT01_2287 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3080 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3078 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3079 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_2967 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3760 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_144 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3020 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AT01_3654 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3822 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3821 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3819 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3820 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_130 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AT01_3757 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_3761 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1972 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1621 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1623 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_2968 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1622 tRNA-Met K14230 tRNA-Met; tRNA Met
D AT01_1767 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AT01_2877 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AT01_2286 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AT01_2599 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AT01_1078 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AT01_610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_612 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_3352 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_922 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_1138 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AT01_1089 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AT01_2189 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AT01_2156 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AT01_2186 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AT01_2332 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AT01_531 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AT01_532 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AT01_2188 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AT01_3651 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_3653 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_3652 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_289 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_290 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_288 tRNA-Val K14237 tRNA-Val; tRNA Val
D AT01_2577 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D AT01_3378 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2829 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2197 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2467 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2338 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2161 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_1564 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AT01_2158 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2831 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_1561 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2335 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2465 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2195 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_3380 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D AT01_2155 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2464 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_1560 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_3381 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2832 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2334 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2194 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D AT01_2157 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AT01_1940 dkgA; 2,5-diketo-D-gluconic acid reductase A K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D AT01_4001 iron-containing alcohol dehydrogenase family protein K08317 hcxA; hydroxycarboxylate dehydrogenase A [EC:1.1.1.-]
D AT01_3658 aldo/keto reductase family protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D AT01_3556 membrane bound FAD containing D-sorbitol dehydrogenase family protein K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14]
D AT01_3447 glucose / Sorbosone dehydrogenase family protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D AT01_1977 flavin oxidoreductase / NADH oxidase family protein K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D AT01_63 zinc-binding dehydrogenase family protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D AT01_899 solA; N-methyl-L-tryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-]
D AT01_2126 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AT01_56 NAD(P)H quinone oxidoreductase, PIG3 family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AT01_1946 flavodoxin-like fold family protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D AT01_359 NADPH-dependent FMN reductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D AT01_3032 NADPH-dependent FMN reductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D AT01_2939 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AT01_544 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AT01_418 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D AT01_1998 hypothetical protein K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D AT01_2090 oxidoreductase molybdopterin binding domain protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D AT01_3602 putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AT01_342 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AT01_2594 peroxiredoxin, Ohr subfamily protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D AT01_3630 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D AT01_2646 putative quercetin 2,3-dioxygenase yhhW K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AT01_3520 globin family protein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D AT01_1814 pyridine nucleotide-disulfide oxidoreductase family protein K27501 alcA; putrescine N-hydroxylase [EC:1.14.13.252]
D AT01_792 ferritin-like domain protein K02217 ftnA; ferritin [EC:1.16.3.2]
D AT01_3237 multicopper oxidase family protein K14588 cueO; cuproxidase [EC:1.16.3.4]
D AT01_2386 oxidoreductase NAD-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D AT01_629 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D AT01_3599 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D AT01_2999 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D AT01_3176 glycyl-radical enzyme activating family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D AT01_980 pflA; pyruvate formate-lyase 1-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D AT01_1002 hcr; NADH oxidoreductase hcr K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-]
D AT01_3952 4Fe-4S dicluster domain protein K12136 hyfA; hydrogenase-4 component A [EC:1.-.-.-]
D AT01_3951 NADH-Ubiquinone/plastoquinone (complex I), various chains family protein K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D AT01_3950 hyfC; hydrogenase-4 component C K12138 hyfC; hydrogenase-4 component C [EC:1.-.-.-]
D AT01_3949 NADH-Ubiquinone/plastoquinone (complex I), various chains family protein K12139 hyfD; hydrogenase-4 component D [EC:1.-.-.-]
D AT01_3948 hyfE; hydrogenase-4 component E K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D AT01_3947 NADH-Ubiquinone/plastoquinone (complex I), various chains family protein K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D AT01_3946 nickel-dependent hydrogenase family protein K12142 hyfG; hydrogenase-4 component G [EC:1.-.-.-]
D AT01_3944 NADH ubiquinone oxidoreductase, 20 Kd subunit K12144 hyfI; hydrogenase-4 component I [EC:1.-.-.-]
D AT01_3943 formate hydrogenlyase maturation HycH family protein K12145 hyfJ; hydrogenase-4 component J [EC:1.-.-.-]
D AT01_3299 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D AT01_293 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D AT01_667 tehB; tellurite resistance protein TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265]
D AT01_3064 carbamoyltransferase family protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D AT01_913 mdoC; glucans biosynthesis protein C K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-]
D AT01_3750 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D AT01_2984 acetyltransferase family protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D AT01_2536 acetyltransferase family protein K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D AT01_3013 acetyltransferase domain protein K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D AT01_528 acetyltransferase domain protein K03829 yedL; putative acetyltransferase [EC:2.3.1.-]
D AT01_991 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D AT01_1556 DTW domain protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D AT01_1642 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AT01_4023 cob(I)alamin adenosyltransferase K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-]
D AT01_1525 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D AT01_40 pfkB carbohydrate kinase family protein K18478 yihV; sulfofructose kinase [EC:2.7.1.184]
D AT01_274 putative phosphotransferase ydiA K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D AT01_1961 glutamate-ammonia ligase adenylyltransferase family protein K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D AT01_361 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AT01_380 ltrA; group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D AT01_613 diguanylate cyclase domain protein K18967 dge1; diguanylate cyclase [EC:2.7.7.65]
D AT01_269 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D AT01_2151 isocitrate dehydrogenase kinase/phosphatase family protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D AT01_487 coA-transferase III family protein K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D AT01_1917 hypothetical protein K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108]
D AT01_3812 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AT01_3393 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AT01_3722 serine/threonine-protein phosphatase K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16]
D AT01_496 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D AT01_1237 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D AT01_952 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AT01_1065 EAL domain protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52]
D AT01_1793 sdsA1; SDS hydrolase SdsA1 K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21]
D AT01_1746 endonuclease I family protein K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D AT01_2208 tatD related DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AT01_3090 tatD related DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AT01_879 hydrolase, TatD family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AT01_3778 PGAP1-like family protein K01175 ybfF; esterase [EC:3.1.-.-]
D AT01_1517 alpha/beta hydrolase family protein K11750 frsA; esterase FrsA [EC:3.1.-.-]
D AT01_2612 glycosyl hydrolases 8 family protein K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D AT01_764 phage lysozyme family protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D AT01_190 phage lysozyme family protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D AT01_1634 glycosyl Hydrolase Family 88 family protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D AT01_45 glycosyl hydrolases 31 family protein K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199]
D AT01_2782 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AT01_3453 ydjC-like family protein K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105]
D AT01_799 ASCH domain protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135]
D AT01_2052 reactive intermediate/imine deaminase family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AT01_1962 CYTH domain protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D AT01_1447 cof; HMP-PP phosphatase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-]
D AT01_3623 nudix-type nucleoside diphosphatase, YffH/AdpP family protein K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-]
D AT01_892 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D AT01_2477 AAA domain family protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D AT01_472 fsa; fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-]
D AT01_2909 hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D AT01_1617 csdA; cysteine desulfurase, catalytic subunit CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-]
D AT01_3334 fucU; L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29]
D AT01_3100 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D AT01_3563 sugar isomerase, KpsF/GutQ family protein K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13]
D AT01_2945 mpl; L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D AT01_464 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D AT01_462 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D AT01_461 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D AT01_1531 nqrA; ubiquinone oxidoreductase, Na(+)-translocating, A subunit K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D AT01_1530 nqrB; ubiquinone oxidoreductase, Na(+)-translocating, B subunit K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D AT01_1529 nqrC; ubiquinone oxidoreductase, Na(+)-translocating, C subunit K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D AT01_1528 nqrD; ubiquinone oxidoreductase, Na(+)-translocating, D subunit K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D AT01_1527 nqrE; ubiquinone oxidoreductase, Na(+)-translocating, E subunit K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D AT01_1526 nqrF; ubiquinone oxidoreductase, Na(+)-translocating, F subunit K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D AT01_2252 copper-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D AT01_2056 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D AT01_62 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D AT01_3252 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D AT01_2643 xylose isomerase-like TIM barrel family protein K06605 iolH; myo-inositol catabolism protein IolH
D AT01_1632 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D AT01_1631 4Fe-4S binding domain protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D AT01_1630 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D AT01_4030 diol dehydratase reactivase alpha subunit K27264 pduG; propanediol dehydratase-reactivating factor large subunit
D AT01_4029 dehydratase medium subunit K27265 pduH; propanediol dehydratase-reactivating factor small subunit
C 99982 Energy metabolism
D AT01_2553 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D AT01_1148 2Fe-2S iron-sulfur cluster binding domain protein K11107 yfaE; ferredoxin
D AT01_465 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D AT01_466 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D AT01_460 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D AT01_3941 4Fe-4S dicluster domain protein K05796 hydN; electron transport protein HydN
D AT01_2482 flavodoxin family protein K06205 mioC; MioC protein
D AT01_1708 flavodoxin K03840 fldB; flavodoxin II
D AT01_3945 4Fe-4S binding domain protein K12143 hyfH; hydrogenase-4 component H
D AT01_3530 nifU; nifU-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D AT01_2069 cybC; soluble cytochrome b562 K15536 cybC; soluble cytochrome b562
D AT01_3619 napD family protein K02570 napD; periplasmic nitrate reductase NapD
D AT01_3618 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF
D AT01_3773 flavodoxin K03839 fldA; flavodoxin I
D AT01_3622 periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family protein K02569 napC; cytochrome c-type protein NapC
C 99983 Lipid metabolism
D AT01_2923 hypothetical protein K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
D AT01_3417 nrdI; nrdI protein K03647 nrdI; protein involved in ribonucleotide reduction
C 99985 Amino acid metabolism
D AT01_3642 cysZ; protein CysZ K06203 cysZ; CysZ protein
D AT01_4017 eutP; ethanolamine utilization protein, EutP K04029 eutP; ethanolamine utilization protein EutP
D AT01_4018 pduU; propanediol utilization protein PduU K04031 eutS; ethanolamine utilization protein EutS
D AT01_1579 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K08234 yaeR; glyoxylase I family protein
D AT01_343 zinc carboxypeptidase family protein K14054 mpaA; murein peptide amidase A
D AT01_1754 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D AT01_482 yciS; inner membrane protein yciS K08992 lapA; lipopolysaccharide assembly protein A
D AT01_481 tetratricopeptide repeat family protein K19804 lapB; lipopolysaccharide assembly protein B
D AT01_2611 bacterial cellulose synthase subunit K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D AT01_2285 tetratricopeptide repeat family protein K02498 hemY; HemY protein
D AT01_2212 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D AT01_2213 SCP-2 sterol transfer family protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D AT01_1959 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D AT01_2982 hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D AT01_2463 mobB; molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
D AT01_4020 electron transport complex, RnfABCDGE type, C subunit K27271 pduS; cobalamin reductase
C 99988 Secondary metabolism
D AT01_1943 sufI; protein SufI K04753 sufI; suppressor of ftsI
C 99999 Others
D AT01_1997 yqjF; inner membrane protein yqjF K15977 K15977; putative oxidoreductase
D AT01_906 doxX family protein K15977 K15977; putative oxidoreductase
D AT01_1557 acetyltransferase family protein K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AT01_3565 glucitol operon activator family protein K02466 gutM; glucitol operon activator protein
D AT01_2072 hypothetical protein K03623 yhcO; ribonuclease inhibitor
D AT01_3727 cspE; RNA chaperone K03704 cspA; cold shock protein
D AT01_2103 cspG; cold shock-like protein CspG K03704 cspA; cold shock protein
D AT01_818 cspC; cold shock-like protein CspC K03704 cspA; cold shock protein
D AT01_995 cspD; cold shock domain protein CspD K03704 cspA; cold shock protein
D AT01_2102 cspG; cold shock-like protein CspG K03704 cspA; cold shock protein
D AT01_3427 cspG; cold shock-like protein CspG K03704 cspA; cold shock protein
D AT01_58 cspE; RNA chaperone K03704 cspA; cold shock protein
D AT01_965 cspE; RNA chaperone K03704 cspA; cold shock protein
D AT01_966 cspE; RNA chaperone K03704 cspA; cold shock protein
D AT01_2170 rsd; regulator of sigma D K07740 rsd; regulator of sigma D
D AT01_1442 glnK; nitrogen regulatory protein P-II 2 K04752 glnK; nitrogen regulatory protein P-II 2
D AT01_2682 S1 RNA binding domain protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D AT01_354 hslJ; heat shock protein hslJ K03668 hslJ; heat shock protein HslJ
D AT01_994 ATP-dependent Clp protease adaptor ClpS family protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D AT01_1458 tig; trigger factor K03545 tig; trigger factor
D AT01_2091 ferric reductase like transmembrane component family protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D AT01_2558 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D AT01_3437 hypothetical protein K03187 ureE; urease accessory protein
D AT01_3438 ureF family protein K03188 ureF; urease accessory protein
D AT01_3439 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D AT01_3440 ureD urease accessory family protein K03190 ureD; urease accessory protein
D AT01_3467 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D AT01_3954 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D AT01_1898 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D AT01_1897 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D AT01_1896 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D AT01_1895 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF
D AT01_3418 nrdH; glutaredoxin-like NrdH family protein K06191 nrdH; glutaredoxin-like protein NrdH
D AT01_2325 sigma-54 interaction domain protein K07391 comM; magnesium chelatase family protein
D AT01_1658 DSBA-like thioredoxin domain protein K07396 K07396; putative protein-disulfide isomerase
D AT01_2723 yhfA; protein yhfA K07397 yhfA; putative redox protein
D AT01_2675 nfuA; fe/S biogenesis protein nfuA K07400 nfuA; Fe/S biogenesis protein NfuA
D AT01_1130 putative secretion system protein K18984 ssaE; secretion system chaperone SsaE
D AT01_1127 putative sscA K15368 sscA; secretion system chaperone SscA
C 99976 Replication and repair
D AT01_1438 methylated-DNA--[]-cysteine S-methyltransferase family protein K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D AT01_1612 hypothetical protein K01146 xni; protein Xni
D AT01_3038 HNH endonuclease family protein K07454 K07454; putative restriction endonuclease
D AT01_2417 DNA repair RadC family protein K03630 radC; DNA repair protein RadC
D AT01_2215 rmuC family protein K09760 rmuC; DNA recombination protein RmuC
D AT01_3464 AAA domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D AT01_998 AAA domain protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D AT01_2013 hypothetical protein K07460 yraN; putative endonuclease
D AT01_2983 GIY-YIG catalytic domain protein K07461 K07461; putative endonuclease
D AT01_2783 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D AT01_397 gyrI-like small molecule binding domain protein K07470 sbmC; DNA gyrase inhibitor
D AT01_756 terminase small subunit K07474 xtmA; phage terminase small subunit
D AT01_983 rarA; replication-associated recombination protein A K07478 ycaJ; putative ATPase
D AT01_2825 topoisomerase DNA binding C4 zinc finger family protein K07479 yrdD; putative DNA topoisomerase
D AT01_2587 putative P4-specific DNA primase K06919 K06919; putative DNA primase/helicase
D AT01_3456 putative P4-specific DNA primase K06919 K06919; putative DNA primase/helicase
D AT01_3699 hypothetical protein K06919 K06919; putative DNA primase/helicase
D AT01_1769 hypothetical protein K06919 K06919; putative DNA primase/helicase
D AT01_1261 integrase core domain protein K18320 IS15; transposase, IS6 family
D AT01_3269 transposase family protein K07486 K07486; transposase
D AT01_366 transposase family protein K07486 K07486; transposase
D AT01_173 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_2009 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_1298 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_1305 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_2242 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_3916 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_1414 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_678 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_703 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_1523 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_755 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_1798 transposase, Mutator family protein K07493 K07493; putative transposase
D AT01_1257 integrase core domain protein K07497 K07497; putative transposase
D AT01_1273 integrase core domain protein K07497 K07497; putative transposase
D AT01_3701 integrase core domain protein K07497 K07497; putative transposase
D AT01_3925 integrase core domain protein K07497 K07497; putative transposase
D AT01_832 integrase core domain protein K07497 K07497; putative transposase
D AT01_1818 transposase family protein K07497 K07497; putative transposase
D AT01_833 transposase family protein K07497 K07497; putative transposase
D AT01_3926 transposase family protein K07497 K07497; putative transposase
D AT01_3703 transposase family protein K07497 K07497; putative transposase
D AT01_3704 transposase family protein K07497 K07497; putative transposase
D AT01_1412 transposase family protein K07497 K07497; putative transposase
D AT01_720 integrase core domain protein K07497 K07497; putative transposase
D AT01_1272 transposase family protein K07497 K07497; putative transposase
D AT01_1256 transposase family protein K07497 K07497; putative transposase
D AT01_369 DDE domain protein K07498 K07498; putative transposase
D AT01_1264 integrase core domain protein K07498 K07498; putative transposase
D AT01_1791 integrase core domain protein K07498 K07498; putative transposase
D AT01_1794 integrase core domain protein K07498 K07498; putative transposase
D AT01_1805 integrase core domain protein K07498 K07498; putative transposase
D AT01_1817 DDE domain protein K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D AT01_333 pspA; phage shock protein A K03969 pspA; phage shock protein A
D AT01_336 phage shock PspD family protein K03971 pspD; phage shock protein D
D AT01_1410 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AT01_1252 formate/nitrite transporter family protein K21990 yfdC; formate-nitrite transporter family protein
D AT01_46 yihP; inner membrane symporter yihP K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D AT01_47 gph; sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D AT01_3222 gph; sugar (Glycoside-Pentoside-Hexuronide) transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D AT01_2290 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family
D AT01_323 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D AT01_908 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D AT01_586 amino acid/peptide transporter family protein K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D AT01_1494 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D AT01_2148 sodium Bile acid symporter family protein K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D AT01_3091 nucleoside transporter, NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D AT01_2426 na+ dependent nucleoside transporter family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D AT01_1023 AspT/YidE/YbjL antiporter duplication domain protein K07085 K07085; putative transport protein
D AT01_2528 AspT/YidE/YbjL antiporter duplication domain protein K07085 K07085; putative transport protein
C 99978 Cell growth
D AT01_507 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
D AT01_2255 dcrB; protein dcrB K27311 dcrB; inner membrane lipoprotein DcrB
D AT01_2932 ric; iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D AT01_555 spoVR like family protein K06415 spoVR; stage V sporulation protein R
D AT01_2404 peptidase M23 family protein K22719 envC; murein hydrolase activator
C 99993 Cell motility
D AT01_875 hypothetical protein K07337 K07337; penicillin-binding protein activator
D AT01_933 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D AT01_4073 hypothetical protein K15540 ecpD; chaperone protein EcpD
D AT01_1609 syd family protein K15723 syd; SecY interacting protein Syd
C 99995 Signaling proteins
D AT01_3219 ampE; protein AmpE K03807 ampE; AmpE protein
D AT01_213 proQ; proP effector K03607 proQ; ProP effector
D AT01_2631 uspA; universal stress protein A K06149 uspA; universal stress protein A
D AT01_64 universal stress family protein K14064 uspC; universal stress protein C
D AT01_393 uspE; universal stress protein E K14055 uspE; universal stress protein E
D AT01_2217 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D AT01_470 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D AT01_2451 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D AT01_657 phoH-like family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D AT01_3753 ybeZ; phoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D AT01_548 hypothetical protein K07180 prkA; serine protein kinase
D AT01_1963 bacterial SH3 domain protein K07184 ygiM; SH3 domain protein
D AT01_3096 bacterial virulence factor hemolysin family protein K07186 smp; membrane protein
D AT01_1469 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D AT01_984 lolA; outer membrane lipocarrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D AT01_622 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D AT01_1242 putative phospholipid-binding lipoprotein mlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D AT01_2301 wzzE; lipopolysaccharide biosynthesis protein wzzE K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE
D AT01_312 slyB; outer membrane lipoprotein slyB K06077 slyB; outer membrane lipoprotein SlyB
D AT01_2101 slyB; outer membrane lipoprotein slyB K06077 slyB; outer membrane lipoprotein SlyB
D AT01_1588 outer membrane family protein K06142 hlpA; outer membrane protein
D AT01_3300 lysM domain protein K06194 nlpD; lipoprotein NlpD
D AT01_632 lysM domain protein K12943 ygeR; lipoprotein YgeR
D AT01_2976 nlpI; lipoprotein nlpI K05803 nlpI; lipoprotein NlpI
D AT01_504 oprF membrane domain protein K07275 ompW; outer membrane protein
D AT01_3367 hypothetical protein K07283 ydiY; putative salt-induced outer membrane protein
D AT01_571 outer membrane lipo, Slp family protein K07285 slp; outer membrane lipoprotein
D AT01_1460 hypothetical protein K07286 yajG; uncharacterized lipoprotein
D AT01_3968 asmA family protein K07289 asmA; AsmA protein
D AT01_2620 asmA family protein K07290 yhjG; AsmA family protein
D AT01_1385 ybbJ; inner membrane protein ybbJ K07340 ybbJ; inner membrane protein
D AT01_3923 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D AT01_902 hypothetical protein K11744 tqsA; AI-2 transport protein TqsA
D AT01_476 glycine zipper 2TM domain protein K04062 osmB; osmotically inducible lipoprotein OsmB
D AT01_1709 inner membrane CreD family protein K06143 creD; inner membrane protein
D AT01_1247 ccmE; cytochrome c-type biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D AT01_1244 cytochrome C biogenesis family protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D AT01_3544 helix-turn-helix family protein K15539 rodZ; cytoskeleton protein RodZ
D AT01_2077 hypothetical protein K21695 aaeX; protein AaeX
D AT01_1976 hdeD; protein hdeD K21908 hdeD; membrane protein HdeD
D AT01_4035 pduB; microcompartment protein PduB K27263 pduB; bacterial microcompartment shell protein
D AT01_4028 pduA; propanediol utilization protein PduA K27266 pduJ; bacterial microcompartment shell protein
D AT01_4027 BMC domain protein K27267 pduK; bacterial microcompartment shell protein
D AT01_4025 pduM; microcompartment protein PduM K27268 pduM; bacterial microcompartment assembly protein
D AT01_4024 ethanolamine utilization EutN/carboxysome family protein K27269 pduN; bacterial microcompartment shell vertex protein
D AT01_4019 microcompartments protein K27272 pduT; bacterial microcompartment shell protein
C 99994 Others
D AT01_2501 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D AT01_2746 bfd; bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D AT01_912 periplasmic glucan biosynthesis, MdoG family protein K03670 mdoG; periplasmic glucans biosynthesis protein
D AT01_2883 cutA; divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D AT01_598 cutC family protein K06201 cutC; copper homeostasis protein
D AT01_2993 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D AT01_3143 hypothetical protein K06195 apaG; ApaG protein
D AT01_2280 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D AT01_2847 hemS; hemin transport protein hemS K07225 hmuS; putative hemin transport protein
D AT01_271 hemS; hemin transport protein hemS K07225 hmuS; putative hemin transport protein
D AT01_1424 ychN; protein ychN K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AT01_1210 cvpA; colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D AT01_940 mce related family protein K06192 pqiB; paraquat-inducible protein B
D AT01_602 oxidoreductase, NAD-binding Rossmann fold family protein K03810 mviM; virulence factor
D AT01_1559 hypothetical protein K05811 yfiM; putative lipoprotein
D AT01_3087 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein
D AT01_608 putative hydrolase ycdX K04477 ycdX; putative hydrolase
D AT01_3475 grcA; autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor
D AT01_527 rssA; NTE family protein rssA K07001 K07001; NTE family protein
D AT01_3262 erpA; iron-sulfur cluster insertion protein erpA K15724 erpA; iron-sulfur cluster insertion protein
D AT01_279 iron-sulfur cluster assembly accessory family protein K05997 sufA; Fe-S cluster assembly protein SufA
D AT01_280 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D AT01_282 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D AT01_221 ydjM; inner membrane protein ydjM K07038 K07038; inner membrane protein
D AT01_3516 hypothetical protein K07048 PTER; phosphotriesterase-related protein
D AT01_2622 yhjD; inner membrane protein YhjD K07058 K07058; membrane protein
D AT01_2449 yihY; YihY family inner membrane domain protein K07058 K07058; membrane protein
D AT01_2886 hypothetical protein K07113 fxsA; UPF0716 protein FxsA
D AT01_284 sufE; cysteine desulfuration protein sufE K02426 sufE; cysteine desulfuration protein SufE
D AT01_1618 csdE; cysteine desulfurase, sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE
D AT01_903 rhodanese-like domain protein K07146 K07146; UPF0176 protein
D AT01_857 hflD; high frequency lysogenization protein hflD K07153 hflD; high frequency lysogenization protein
D AT01_1816 fhuF; siderophore-iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF
D AT01_2736 slyX family protein K03745 slyX; SlyX protein
D AT01_2824 hypothetical protein K03747 smg; Smg protein
D AT01_3115 creA family protein K05805 creA; CreA protein
D AT01_1745 peptidase MA superfamily protein K02742 sprT; SprT protein
D AT01_1211 sporulation related domain protein K03749 dedD; DedD protein
D AT01_2702 sporulation related domain protein K03112 damX; DamX protein
D AT01_3955 hypothetical protein K03748 sanA; SanA protein
D AT01_1214 hypothetical protein K03975 dedA; membrane-associated protein
D AT01_941 integral membrane, PqiA family protein K03808 pqiA; paraquat-inducible protein A
D AT01_211 yebS; inner membrane protein yebS K03808 pqiA; paraquat-inducible protein A
D AT01_1167 hypothetical protein K05594 elaB; ElaB protein
D AT01_338 hypothetical protein K08990 ycjF; putative membrane protein
D AT01_2248 hypothetical protein K08993 yhhL; putative membrane protein
D AT01_529 SEC-C motif family protein K09858 K09858; SEC-C motif domain protein
D AT01_1439 hypothetical protein K09914 K09914; putative lipoprotein
D AT01_2138 maltose operon periplasmic family protein K05775 malM; maltose operon periplasmic protein
D AT01_2144 psiE; protein psiE K13256 psiE; protein PsiE
D AT01_1253 phnA Zinc-Ribbon family protein K06193 phnA; protein PhnA
C 99997 Function unknown
D AT01_3480 ankyrin repeat family protein K06867 K06867; uncharacterized protein
D AT01_2003 type VI secretion system effector, Hcp1 family protein K06887 K06887; uncharacterized protein
D AT01_2 type VI secretion system effector, Hcp1 family protein K06887 K06887; uncharacterized protein
D AT01_716 type VI secretion system effector, Hcp1 family protein K06887 K06887; uncharacterized protein
D AT01_2925 dienelactone hydrolase family protein K06889 K06889; uncharacterized protein
D AT01_702 dienelactone hydrolase family protein K06889 K06889; uncharacterized protein
D AT01_3862 inhibitor of apoptosis-promoting Bax1 family protein K06890 K06890; uncharacterized protein
D AT01_182 lysozyme family protein K06903 W; Bacteriophage baseplate protein W
D AT01_337 hypothetical protein K06918 K06918; uncharacterized protein
D AT01_927 coA binding domain protein K06929 K06929; uncharacterized protein
D AT01_306 hypothetical protein K06938 K06938; uncharacterized protein
D AT01_1055 putative zinc-/iron-chelating domain protein K06940 K06940; uncharacterized protein
D AT01_220 dicarboxylate symporter family protein K06956 K06956; uncharacterized protein
D AT01_322 glyoxalase-like domain protein K06996 K06996; uncharacterized protein
D AT01_1950 hypothetical protein K07000 K07000; uncharacterized protein
D AT01_872 hypothetical protein K07000 K07000; uncharacterized protein
D AT01_3749 pyridoxamine 5'-phosphate oxidase, FMN-binding family protein K07006 K07006; uncharacterized protein
D AT01_1077 type I phosphodiesterase / nucleotide pyrophosphatase family protein K07014 K07014; uncharacterized protein
D AT01_2726 alpha/beta hydrolase family protein K07019 K07019; uncharacterized protein
D AT01_3124 yaaH; inner membrane protein yaaH K07034 K07034; uncharacterized protein
D AT01_3607 neutral zinc metallopeptidase family protein K07054 K07054; uncharacterized protein
D AT01_2734 hypothetical protein K07070 K07070; uncharacterized protein
D AT01_1201 rmlD substrate binding domain protein K07071 K07071; uncharacterized protein
D AT01_1232 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D AT01_1199 yfcE; phosphodiesterase yfcE K07095 K07095; uncharacterized protein
D AT01_2935 hypothetical protein K07109 K07109; uncharacterized protein
D AT01_1742 sulfur transport family protein K07112 K07112; uncharacterized protein
D AT01_1743 sulfur transport family protein K07112 K07112; uncharacterized protein
D AT01_2012 lppC lipofamily protein K07121 K07121; uncharacterized protein
D AT01_595 yecN; inner membrane protein yecN K07136 K07136; uncharacterized protein
D AT01_2019 radical SAM superfamily protein K07139 K07139; uncharacterized protein
D AT01_944 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D AT01_3934 hypothetical protein K07148 K07148; uncharacterized protein
D AT01_247 hypothetical protein K07150 K07150; uncharacterized protein
D AT01_2514 putative membrane protein insertion efficiency factor K08998 K08998; uncharacterized protein
D AT01_1757 hypothetical protein K09131 K09131; uncharacterized protein
D AT01_3733 hypothetical protein K09158 K09158; uncharacterized protein
D AT01_561 putative zinc-/iron-chelating domain protein K09160 K09160; uncharacterized protein
D AT01_1190 hypothetical protein K09161 K09161; uncharacterized protein
D AT01_1975 yfbU domain protein K09161 K09161; uncharacterized protein
D AT01_3625 hypothetical protein K09768 K09768; uncharacterized protein
D AT01_510 yciI; protein yciI K09780 K09780; uncharacterized protein
D AT01_549 hypothetical protein K09786 K09786; uncharacterized protein
D AT01_1420 hypothetical protein K09790 K09790; uncharacterized protein
D AT01_964 trm112p-like family protein K09791 K09791; uncharacterized protein
D AT01_2405 divergent polysaccharide deacetylase family protein K09798 K09798; uncharacterized protein
D AT01_3469 rnfH Ubiquitin family protein K09801 K09801; uncharacterized protein
D AT01_4007 hypothetical protein K09802 K09802; uncharacterized protein
D AT01_1730 hypothetical protein K09807 K09807; uncharacterized protein
D AT01_999 hypothetical protein K09824 virK; uncharacterized protein
D AT01_1524 hypothetical protein K05952 K05952; uncharacterized protein
D AT01_939 hypothetical protein K09857 K09857; uncharacterized protein
D AT01_3120 hypothetical protein K09861 K09861; uncharacterized protein
D AT01_3210 hypothetical protein K09862 K09862; uncharacterized protein
D AT01_2166 hypothetical protein K09891 K09891; uncharacterized protein
D AT01_2456 der GTPase activator family protein K09894 K09894; uncharacterized protein
D AT01_1723 yecA family protein K09895 K09895; uncharacterized protein
D AT01_2461 yihD; protein yihD K09896 K09896; uncharacterized protein
D AT01_2326 hypothetical protein K09897 K09897; uncharacterized protein
D AT01_2725 hypothetical protein K09898 K09898; uncharacterized protein
D AT01_1191 hypothetical protein K09899 K09899; uncharacterized protein
D AT01_514 hypothetical protein K09901 K09901; uncharacterized protein
D AT01_564 hypothetical protein K09902 K09902; uncharacterized protein
D AT01_1076 hypothetical protein K09904 K09904; uncharacterized protein
D AT01_599 yecM; protein yecM K09907 K09907; uncharacterized protein
D AT01_2028 hypothetical protein K09908 K09908; uncharacterized protein
D AT01_928 hypothetical protein K09909 K09909; uncharacterized protein
D AT01_3232 hypothetical protein K09910 K09910; uncharacterized protein
D AT01_936 organizer of macrodomain of Terminus of chromosome family protein K09911 K09911; uncharacterized protein
D AT01_1083 hypothetical protein K09912 K09912; uncharacterized protein
D AT01_603 hypothetical protein K09915 K09915; uncharacterized protein
D AT01_543 hypothetical protein K09916 K09916; uncharacterized protein
D AT01_803 hypothetical protein K09917 K09917; uncharacterized protein
D AT01_800 yebG family protein K09918 K09918; uncharacterized protein
D AT01_1952 hypothetical protein K09920 K09920; uncharacterized protein
D AT01_2277 hypothetical protein K09921 K09921; uncharacterized protein
D AT01_1762 hypothetical protein K09923 K09923; uncharacterized protein
D AT01_2918 hypothetical protein K09937 K09937; uncharacterized protein
D AT01_3572 hypothetical protein K09946 K09946; uncharacterized protein
D AT01_3645 hypothetical protein K09954 K09954; uncharacterized protein
D AT01_751 hypothetical protein K09960 K09960; uncharacterized protein
D AT01_753 hypothetical protein K09961 K09961; uncharacterized protein
D AT01_3647 hypothetical protein K09962 K09962; uncharacterized protein
D AT01_1390 traB family protein K09973 K09973; uncharacterized protein
D AT01_638 hutD family protein K09975 K09975; uncharacterized protein
D AT01_358 hypothetical protein K09978 K09978; uncharacterized protein
D AT01_2987 hypothetical protein K09979 K09979; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 14, 2024