+F Chromosome and associated proteins KO #

  Chromosome and Associated Proteins - Yersinia pestis Nepal516 (biovar Antiqua)

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AEukaryotic type B Sister chromatid cohesion proteins C Cohesin complex C Adherin complex C CTF18-RFC complex C Fork protection complex C Other sister chromatid cohesion factors B Meiosis-specific proteins C Cohesin complex and associated proteins C Synaptonemal complex C DSB formation-related proteins C Others B Nucleosome assembly factors C Histones C Histone chaperones D Nucleoplasmins D NAPs (Nucleosome assembly proteins) D CAF-1 D FACT complex D Other Histone chaperones and regulators C HMG (high mobility group) proteins B Histone modification proteins C HATs (histone acetyltransferases) C HAT complexes D PCAF complex D STAGA complex D TFTC complex D TIP60 complex D HBO1 complex D MOZ/MORF complex D SAGA complex D SLIK complex D ADA-HAT complex D HAT-A2 complex D ATAC complex D HATB complex D NSL complex D MSL complex D NuA3 complex D NuA4 complex D SAS complex C HDACs (histone deacetylases) D Class I HDACs D Class II HDACs D SIRTs (sirtuins, class III HDACs) D Class IV HDACs C HDAC complexes D Sin3A-HDAC complex D BRAF-HDAC complex D REST complex D SHIP complex D MiDAC complex D SMART complex D Other HDAC associated proteins C HMTs (histone methyltransferases) D HKMTs (histone lysine methyltransferases) D PRMTs (protein arginine metyltransferases) C HMT complexes D COMPASS/SET1 complex D COMPASS/SET1 complex (yeast) D MLL-HCF complex D MLL3/MLL4 complex D Dot1-containing complex C Histone demethylases C Polycomb repressive complex (PRC) and associated proteins D Canonical PRC1 (PRC1.2/1.4) E PRC1.4 specific proteins D Noncanonical PRC1 (PRC1.1) D Noncanonical PRC1 (PRC1.3/1.5) D Noncanonical PRC1 (PRC1.6) D PRC2.1 D PRC2.2 D PR-DUB complex D Other PRC associated proteins C Sir proteins C Other histone modification proteins B Chromosome condensation proteins C Condensin I C Condensin II C Other regulators of chromosome condensation B Centromeric chromatin formation proteins C Kinetochore proteins D Centromere proteins D CPC (chromosomal passenger complex) D KMN network proteins E MIS12 complex E NDC80 complex D Mis6 complex D COMA complex D NMS complex E NDC80 complex E MIND kinetochore complex D MIS16-MIS18 complex D DASH complex D CBF3 complex D Others C SAC (spindle assembly checkpoint) factors D Core SAC proteins D Motor proteins E RZZ complex E Dynein complex D Protein kinases D Others C Other centromeric chromatin formation proteins D Shugoshin D PP2A (protein phosphatase 2A) B Heterochromatin formation proteins C HP1 (heterochromatin protein 1) C MBPs (metylated DNA binding proteins) C Other heterochromatin formation proteins B Gene silencing C RISC (RNA-induced silencing complex) C piRNA pathway C RNA interference (RNAi) pathway D RITS (RNA-induced transcriptional silencing) complex D RDRC (RNA-directed RNA polymerase complex) D Other RNAi proteins C microRNA pathway D Microprocessor complex E YPN_1206 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D RISC loading complex D Other miRNA pathway proteins C Transposable elements B Centrosome formation proteins C Centriole proteins C Pericentriolar materials (PCM) D Centriolar satellite D Other PCM proteins C Cyclins C Kinases and associated factors D Kinase anchoring protein C Microtubules and associated factors D gamma-tubulin ring complex D Other tubulins D Dynactin complex D BRISC complex D Microtubule-associated proteins C Augmin complex C Centrosome duplication proteins D Centriole replication proteins D Regulators of centriole replication D Other centrosome duplication proteins C Nde1-Su48 complex C LINC complex C 3M complex C Other centriole associated proteins C Spindle formation proteins B Sister chromatid separation proteins C Securin and associated proteins C Separase C APC/C complex C Aurora kinases D Regulators of Aurora kinases C TACC proteins C Polo kinases C Early mitotic inhibitors B Chromatin remodeling factors C BAF complex C PBAF complex C GBAF(ncBAF) complex C CHRAC complex C RSF complex C WICH complex C B-WICH complex C NORC complex C BRF complex C NuRD complex C NuRF complex C NuRF complex (fruit fly) C CERF complex C SRCAP complex C INO80 complex C INO80 complex (yeast) C RSC complex C SWI/SNF complex C SWR1 complex C ASTRA complex C Other chromatin remodeling factors # AProkaryotic type B Nucleoid associated proteins C HNS (histone-like nucleoid structuring protein) D YPN_1642 nucleoid protein H-NS K03746 hns; DNA-binding protein H-NS C HU (heat unstable protein) D YPN_0234 bacterial nucleoid protein HU alpha subunit K05787 hupA; DNA-binding protein HU-alpha D YPN_0936 bacterial nucleoid protein HU beta subunit K03530 hupB; DNA-binding protein HU-beta C IHF (integration host factor) D YPN_1881 integration host factor alpha-subunit K04764 ihfA; integration host factor subunit alpha D YPN_2584 integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta C Other nucleoid associated proteins D YPN_0327 transcriptional regulator, AraC family K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D YPN_3955 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D YPN_3433 DnaA-interacting protein DiaA K12961 diaA; DnaA initiator-associating protein D YPN_2535 hypothetical protein K11940 hspQ; heat shock protein HspQ D YPN_2105 DNA-binding protein K04047 dps; starvation-inducible DNA-binding protein D YPN_3518 DNA-binding protein Fis K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D YPN_3298 RNA-binding protein Hfq K03666 hfq; host factor-I protein D YPN_3115 chromosome initiation inhibitor K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D YPN_2605 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D YPN_1979 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D YPN_2714 nucleoid-associated protein K06899 ndpA; nucleoid-associated protein B Chromosome partitioning proteins C MukBEF complex D YPN_2572 bacterial condensin subunit MukB K03632 mukB; chromosome partition protein MukB D YPN_2573 bacterial condensin subunit MukE K03804 mukE; chromosome partition protein MukE D YPN_2574 bacterial condensin subunit MukF K03633 mukF; chromosome partition protein MukF C Condensin-like complex C Divisome proteins D YPN_0425 cell division protein FtsA K03590 ftsA; cell division protein FtsA D YPN_0731 cell division protein FtsB K05589 ftsB; cell division protein FtsB D YPN_0151 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D YPN_0415 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D YPN_2604 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D YPN_0414 cell division protein K03586 ftsL; cell division protein FtsL D YPN_3746 cell division protein FtsN K03591 ftsN; cell division protein FtsN D YPN_0424 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D YPN_0420 cell division protein FtsW K03588 ftsW; cell division protein FtsW D YPN_0152 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D YPN_0426 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D YPN_1392 cell division protein ZipA K03528 zipA; cell division protein ZipA D YPN_3111 cell division protein ZapA K09888 zapA; cell division protein ZapA D YPN_3756 hypothetical protein K09892 zapB; cell division protein ZapB D YPN_2561 hypothetical protein K18657 zapC; cell division protein ZapC D YPN_0658 hypothetical protein K18778 zapD; cell division protein ZapD D YPN_3446 hypothetical protein K06916 zapE; cell division protein ZapE D YPN_3277 hypothetical protein K07269 ytfB; cell division protein YtfB D YPN_3301 N-acetylmuramoyl-L-alanine amidase-family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D YPN_2978 N-acetylmuramoyl-L-alanine amidase AmiC precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D YPN_0604 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system D YPN_0958 multidrug efflux protein K03585 acrA; membrane fusion protein, multidrug efflux system C Inhibitors of FtsZ assembly D YPN_1555 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D YPN_1554 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D YPN_1553 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D YPN_2543 SOS cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA D YPN_3804 cell division inhibitor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator C Other chromosome partitioning proteins D YPN_1170 negative regulator of replication initiation SeqA K03645 seqA; negative modulator of initiation of replication D YPN_3506 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D YPN_3505 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D YPN_3504 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D YPN_1088 rod shape-determining protein K05837 rodA; rod shape determining protein RodA D YPN_MT0085 partitioning protein A K03496 parA; chromosome partitioning protein D YPN_MT0094 DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D YPN_MT0086 partitioning protein B K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D YPN_0529 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D YPN_0526 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D YPN_3987 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D YPN_3986 glucose inhibited division protein B K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D YPN_0121 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC D YPN_3091 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD D YPN_2457 hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D YPN_0496 conserved hypothetical protein K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D YPN_0246 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: June 12, 2024