+D GENES KO
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KEGG Orthology (KO) - Clostridium botulinum Ba4
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cbi00010]
D CLJ_B1711 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJ_B3559 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLJ_B3676 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJ_B2846 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLJ_B0592 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLJ_B0240 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJ_B0276 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLJ_B0274 gap_1; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLJ_B1144 gap_2; glyceraldehyde-3-phosphate dehydrogenase, type I K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59]
D CLJ_B0275 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLJ_B0277 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLJ_B0278 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJ_B3675 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLJ_B3198 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLJ_B1742 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B2987 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJ_B1234 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJ_B3730 putative 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CLJ_B3729 putative 2-oxoacid:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CLJ_B1617 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLJ_B0401 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLJ_B3381 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3958 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B1296 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CLJ_B3646 glycosyl hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLJ_B1242 putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLJ_B0333 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B3064 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0325 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0344 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0322 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B0342 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B1441 ptsG; PTS system, glucose-specific, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLJ_B2981 PTS system, glucose family, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:cbi00020]
D CLJ_B0485 HMGL-related enzyme K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D CLJ_B0486 putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLJ_B0487 dehydrogenase, isocitrate/isopropylmalate family K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B3730 putative 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CLJ_B3729 putative 2-oxoacid:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CLJ_B3731 putative 2-oxoacid:acceptor oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CLJ_B3750 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLJ_B3749 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLJ_B3593 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLJ_B1742 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLJ_B2987 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJ_B1234 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cbi00030]
D CLJ_B3559 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLJ_B2732 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLJ_B3697 transketolase, pyridine binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJ_B3698 transketolase, thiamine diphosphate binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJ_B2361 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLJ_B1340 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CLJ_B0182 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLJ_B1670 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D CLJ_B1671 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D CLJ_B3381 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3958 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3874 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLJ_B0346 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLJ_B1296 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D CLJ_B0347 kinase, pfkB family K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D CLJ_B2140 aor; aldehyde ferredoxin oxidoreductase, tungsten-containing K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5]
D CLJ_B0240 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJ_B2846 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLJ_B0592 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLJ_B3676 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:cbi00040]
D CLJ_B3379 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJ_B2732 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CLJ_B3725 putative L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLJ_B2345 oxidoreductase, zinc-binding dehydrogenase family K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLJ_B1316 araD; L-ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:cbi00051]
D CLJ_B0471 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLJ_B0140 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLJ_B1316 araD; L-ribulose-5-phosphate 4-epimerase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D CLJ_B3676 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJ_B2846 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLJ_B0592 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLJ_B3720 srlD; sorbitol-6-phosphate 2-dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140]
D CLJ_B1944 pfkB_1; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D CLJ_B3725 putative L-iditol 2-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLJ_B2345 oxidoreductase, zinc-binding dehydrogenase family K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D CLJ_B0240 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJ_B0276 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CLJ_B1020 dhaKL; dihydroxyacetone kinase, DhaK/DhaL subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CLJ_B0182 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CLJ_B3078 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D CLJ_B3079 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D CLJ_B3721 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLJ_B3722 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLJ_B3723 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
C 00052 Galactose metabolism [PATH:cbi00052]
D CLJ_B2909 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJ_B3007 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJ_B2293 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJ_B3379 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJ_B3381 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3958 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B1711 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJ_B2915 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLJ_B3676 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJ_B2198 class II aldolase, tagatose bisphosphate family K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40]
D CLJ_B1712 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:cbi00053]
D CLJ_B2360 putative PTS system, L-ascorbate family, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLJ_B2359 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLJ_B2358 putative PTS system, L-ascorbate family, IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:cbi00500]
D CLJ_B1462 PTS system, IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLJ_B1712 glycosyl hydrolase, family 13 K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D CLJ_B3379 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJ_B3642 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLJ_B3643 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLJ_B3645 PTS system, lactose/cellobiose family, IIC component K02761 celB; cellobiose PTS system EIIC component
D CLJ_B3646 glycosyl hydrolase, family 4 K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLJ_B1242 putative beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D CLJ_B0333 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B3064 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0325 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0344 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0322 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B0342 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B1713 PTS system, glucose/glucoside family, IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLJ_B0331 PTS system, glucose/glucoside family, IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLJ_B1714 endonuclease/exonuclease/phosphatase family protein K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D CLJ_B0332 glvA_1; maltose-6'-phosphate glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D CLJ_B0343 glvA_2; maltose-6'-phosphate glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122]
D CLJ_B2192 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLJ_B2193 treC; alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D CLJ_B3381 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3958 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B1711 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJ_B3559 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cbi00520]
D CLJ_B3059 glycosyl hydrolase, family 18 K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D CLJ_B1130 putative glycosyl hydrolase K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D CLJ_B1627 chiA; chitinase A K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D CLJ_B0333 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B3064 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0325 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0344 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B3065 nagE; PTS system, N-acetylglucosamine-specific, IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLJ_B3061 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D CLJ_B3060 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D CLJ_B3716 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLJ_B3727 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CLJ_B3875 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLJ_B1461 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D CLJ_B0198 murA_1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJ_B3896 murA_2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJ_B3681 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLJ_B0187 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLJ_B3374 UDP-glucose/GDP-mannose dehydrogenase family K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D CLJ_B3373 oxidoreductase, NAD-binding Rossmann fold family K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CLJ_B0876 putative pleiotropic regulatory protein DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CLJ_B3366 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D CLJ_B2947 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CLJ_B0322 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B0342 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B1441 ptsG; PTS system, glucose-specific, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLJ_B2981 PTS system, glucose family, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLJ_B1711 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJ_B3381 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3958 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3379 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJ_B2909 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJ_B3007 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJ_B2293 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJ_B2915 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLJ_B3078 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D CLJ_B3079 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D CLJ_B3559 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLJ_B0471 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLJ_B0140 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
C 00620 Pyruvate metabolism [PATH:cbi00620]
D CLJ_B2987 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJ_B1234 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJ_B3730 putative 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CLJ_B3729 putative 2-oxoacid:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CLJ_B1742 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B3488 pfl; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLJ_B2312 eutE; acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLJ_B0401 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJ_B2684 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLJ_B2685 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLJ_B3675 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLJ_B3923 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLJ_B3927 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLJ_B3925 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLJ_B3924 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLJ_B1054 putative glycolate oxidase K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D CLJ_B1053 electron transfer flavoprotein, alpha subunit/FixB family protein K26114 lctC; lactate dehydrogenase (NAD+,ferredoxin) subunit LctC
D CLJ_B1052 electron transfer flavoprotein, beta subunit/FixA family protein K26115 lctB; lactate dehydrogenase (NAD+,ferredoxin) subunit LctB
D CLJ_B1617 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLJ_B3563 ldhA; D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D CLJ_B1026 oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
D CLJ_B0709 putative lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CLJ_B1632 glyoxalase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D CLJ_B3322 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CLJ_B1051 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLJ_B1992 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLJ_B2223 conserved hypothetical protein K22373 larA; lactate racemase [EC:5.1.2.1]
D CLJ_B0258 malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJ_B3593 pyc; pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D CLJ_B3750 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha region K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D CLJ_B3749 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta region K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D CLJ_B3198 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cbi00630]
D CLJ_B0486 putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJ_B3894 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJ_B2825 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLJ_B0770 gcvPA; glycine cleavage system P protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLJ_B0771 gcvPB; glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CLJ_B0768 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0769 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CLJ_B2445 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLJ_B0346 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D CLJ_B0900 oxdD; oxalate decarboxylase K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
C 00640 Propanoate metabolism [PATH:cbi00640]
D CLJ_B2684 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLJ_B2685 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B3488 pfl; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLJ_B3471 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLJ_B3923 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLJ_B3927 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLJ_B3925 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLJ_B3924 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLJ_B1617 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLJ_B1021 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLJ_B2203 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLJ_B1026 oxidoreductase, aldo/keto reductase family K23257 yvgN; methylglyoxal/glyoxal reductase [EC:1.1.1.283 1.1.1.-]
C 00650 Butanoate metabolism [PATH:cbi00650]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJ_B3473 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLJ_B3474 crt; 3-hydroxybutyryl-CoA dehydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D CLJ_B3471 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLJ_B3081 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLJ_B3733 buk; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D CLJ_B3735 buk_2; butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D CLJ_B3734 ptb; phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D CLJ_B3385 phosphate acetyl/butyryl transferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D CLJ_B2312 eutE; acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D CLJ_B0401 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJ_B1524 bdhA; NADH-dependent butanol dehydrogenase K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D CLJ_B2119 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLJ_B3488 pfl; formate acetyltransferase 1 K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D CLJ_B2987 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJ_B1234 pyruvate ferredoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CLJ_B3730 putative 2-oxoacid:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CLJ_B3729 putative 2-oxoacid:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CLJ_B2427 oxidoreductase, zinc-binding dehydrogenase family K00004 BDH; (R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.4 1.1.1.- 1.1.1.303]
C 00660 C5-Branched dibasic acid metabolism
C 00562 Inositol phosphate metabolism [PATH:cbi00562]
D CLJ_B2864 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLJ_B0276 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cbi00190]
D CLJ_B2022 putative iron hydrogenase, gamma subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CLJ_B2021 putative iron hydrogenase, electron-transfer subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CLJ_B2020 [Fe] hydrogenase K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CLJ_B0193 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLJ_B0195 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLJ_B0194 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLJ_B0192 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLJ_B0196 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLJ_B0189 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLJ_B0191 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLJ_B0190 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLJ_B2855 ntpA; V-type sodium ATPase, catalytic A subunit K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D CLJ_B2854 ntpB; V-type sodium ATPase, B subunit K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D CLJ_B2857 ntpC; V-type sodium ATPase, C subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D CLJ_B2853 ntpD; V-type sodium ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D CLJ_B2858 ntpE; V-type sodium ATPase, E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D CLJ_B2856 ntpG; V-type sodium ATPase, G subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D CLJ_B2861 putative V-type ATPase subunit K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D CLJ_B2487 hypothetical protein K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H
D CLJ_B2860 ntpI; V-type sodium ATPase, I subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D CLJ_B2859 ntpK; V-type sodium ATPase, K subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D CLJ_B2867 putative manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cbi00680]
D CLJ_B1446 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJ_B2428 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJ_B1447 nitrate reductase, iron-sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
D CLJ_B2825 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLJ_B0278 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJ_B1020 dhaKL; dihydroxyacetone kinase, DhaK/DhaL subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CLJ_B0240 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CLJ_B2846 glpX; fructose-1,6-bisphosphatase, class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11]
D CLJ_B0592 fructose-1,6-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D CLJ_B3676 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJ_B1863 formylmethanofuran dehydrogenase E subunit-related protein K11261 fwdE; formylmethanofuran dehydrogenase subunit E [EC:1.2.7.12]
D CLJ_B2684 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CLJ_B2685 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLJ_B0277 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLJ_B1174 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJ_B1597 mtbC; dimethylamine corrinoid protein K16179 mtbC; dimethylamine corrinoid protein
D CLJ_B3884 putative 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71]
C 00910 Nitrogen metabolism [PATH:cbi00910]
D CLJ_B0762 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJ_B3019 hcp; hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D CLJ_B3935 oxidoreductase, 2-nitropropane dioxygenase family K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CLJ_B1989 gluD; glutamate dehydrogenase, NAD-specific K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CLJ_B3894 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJ_B3585 gltA_2; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJ_B1754 gltA_1; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJ_B2824 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJ_B1585 hypothetical protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cbi00920]
D CLJ_B2641 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D CLJ_B1008 asrA; sulfite reductase, subunit A K16950 asrA; anaerobic sulfite reductase subunit A
D CLJ_B1009 asrB; sulfite reductase, subunit B K16951 asrB; anaerobic sulfite reductase subunit B
D CLJ_B1010 arsC; anaerobic sulfite reductase, subunit C K00385 asrC; anaerobic sulfite reductase subunit C
D CLJ_B0845 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CLJ_B0254 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLJ_B1220 cysK_2; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJ_B0790 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJ_B0253 cysK_1; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJ_B2060 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cbi00061]
D CLJ_B3923 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CLJ_B3927 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CLJ_B3925 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CLJ_B3924 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CLJ_B2680 acpP_1; acyl carrier protein K02078 acpP; acyl carrier protein
D CLJ_B3932 acpP_2; acyl carrier protein K02078 acpP; acyl carrier protein
D CLJ_B3930 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLJ_B0783 putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLJ_B3933 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLJ_B3928 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLJ_B0579 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJ_B3929 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJ_B3926 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLJ_B3931 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLJ_B2814 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cbi00071]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJ_B3471 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLJ_B2814 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLJ_B0401 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cbi00561]
D CLJ_B2445 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLJ_B1020 dhaKL; dihydroxyacetone kinase, DhaK/DhaL subunit K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D CLJ_B1021 dhaD; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLJ_B2203 glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6]
D CLJ_B3012 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLJ_B2681 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLJ_B2363 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CLJ_B0484 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJ_B0256 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJ_B3204 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLJ_B0899 lipA; triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CLJ_B2275 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D CLJ_B0165 conserved hypothetical protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLJ_B3115 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLJ_B0680 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00564 Glycerophospholipid metabolism [PATH:cbi00564]
D CLJ_B2749 NAD-dependent glycerol-3-phosphate dehydrogenase family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CLJ_B2456 oxidoreductase, FAD/[2Fe-2S]-binding K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CLJ_B1118 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D CLJ_B2363 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CLJ_B0484 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJ_B0256 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJ_B3204 diacylglycerol kinase/PAP2 family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CLJ_B2864 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLJ_B1232 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLJ_B3180 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLJ_B3484 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D CLJ_B2654 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CLJ_B0245 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLJ_B0027 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CLJ_B1067 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLJ_B2630 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CLJ_B2904 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
C 00565 Ether lipid metabolism
D CLJ_B2864 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:cbi00600]
D CLJ_B1240 O-glycosyl hydrolase, family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
D CLJ_B3153 lipase/acylhydrolase, GDSL family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cbi00230]
D CLJ_B2042 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLJ_B0547 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLJ_B3381 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3958 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3874 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CLJ_B3131 purF_1; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLJ_B3166 purF_2; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLJ_B3127 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CLJ_B3129 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLJ_B2810 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D CLJ_B3130 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CLJ_B3133 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CLJ_B3132 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CLJ_B2620 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLJ_B3128 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLJ_B3325 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLJ_B2209 phosphoribosyl transferase domain protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLJ_B0281 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLJ_B2037 punA; purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLJ_B3453 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CLJ_B2759 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLJ_B3849 hpt_2; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CLJ_B3346 hpt_1; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D CLJ_B3576 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLJ_B3542 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CLJ_B0371 xpt_1; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CLJ_B1186 xpt_2; xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CLJ_B1333 putative xanthine dehydrogenase, molybdopterin-binding subunit K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4]
D CLJ_B1334 putative xanthine dehydrogenase, FAD-binding subunit K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4]
D CLJ_B1335 putative xanthine dehydrogenase, iron-sulfur binding subunit K13480 ygeU; xanthine dehydrogenase iron-sulfur-binding subunit
D CLJ_B3575 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLJ_B1336 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D CLJ_B2744 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLJ_0115 putative guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CLJ_B3042 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLJ_B3041 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CLJ_B0131 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLJ_B3196 deoxynucleotide triphosphohydrolase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D CLJ_B3324 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLJ_B0230 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D CLJ_B0238 putative adenylyl cyclase CyaB K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1]
D CLJ_B3955 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLJ_B1035 add; adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D CLJ_B0349 ade; adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D CLJ_B3768 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLJ_B3148 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D CLJ_B2824 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:cbi00240]
D CLJ_B2950 ATP-grasp domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLJ_B3514 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLJ_B3513 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLJ_B3512 pyrC; dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CLJ_B3509 pyrD; dihydroorotate oxidase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CLJ_0029 putative hihydroorotate dehydrogenase K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D CLJ_B3510 pyrK; dihydroorotate dehydrogenase, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D CLJ_B3508 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CLJ_B3511 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CLJ_B2657 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CLJ_B3262 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CLJ_B0170 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CLJ_B1986 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D CLJ_B2784 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CLJ_B0243 putative threonyl-tRNA synthetase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D CLJ_B0281 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLJ_B3453 conserved hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D CLJ_B0183 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLJ_B1580 pyrR_1; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLJ_B3048 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLJ_B1209 kinase, PfkB family K16328 psuK; pseudouridine kinase [EC:2.7.1.83]
D CLJ_B1210 indigoidine synthase A family protein K16329 psuG; pseudouridylate synthase [EC:4.2.1.70]
D CLJ_B2036 pdp; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D CLJ_B3203 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLJ_B0303 cytidine/deoxycytidylate deaminase family protein K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLJ_B3660 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D CLJ_B2277 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CLJ_B0131 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D CLJ_B3042 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLJ_B3041 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CLJ_B0185 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLJ_B0088 putative thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CLJ_B1276 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CLJ_B0174 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D CLJ_B0817 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CLJ_B3811 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CLJ_B3047 pyridine nucleotide-disulphide oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D CLJ_B3046 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLJ_B3140 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cbi00250]
D CLJ_B2623 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1982 aspB_1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1059 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1550 putative L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLJ_B2747 ansA; L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CLJ_B1606 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CLJ_B2941 conserved domain protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLJ_B1999 hydrolase, carbon-nitrogen family K13566 NIT2; omega-amidase [EC:3.5.1.3]
D CLJ_B1207 aspD; aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CLJ_B2901 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLJ_B2900 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLJ_B3955 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CLJ_B2620 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CLJ_B3514 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CLJ_B3513 pyrI; aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit
D CLJ_B2119 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLJ_B3585 gltA_2; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJ_B1754 gltA_1; glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CLJ_B1989 gluD; glutamate dehydrogenase, NAD-specific K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CLJ_B3894 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJ_B2950 ATP-grasp domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLJ_B3035 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLJ_B3716 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLJ_B3131 purF_1; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLJ_B3166 purF_2; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cbi00260]
D CLJ_B2634 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B1749 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B3619 lysC; aspartate kinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B3423 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLJ_B2061 hom_2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJ_B1750 hom_1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJ_B1748 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CLJ_B1747 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CLJ_B2444 putative threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D CLJ_B2825 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLJ_B2445 glxK; glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D CLJ_B0277 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CLJ_B1174 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJ_B1237 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLJ_B0770 gcvPA; glycine cleavage system P protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLJ_B0771 gcvPB; glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CLJ_B0768 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0769 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D CLJ_B0245 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CLJ_B1255 sdhB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLJ_B1256 sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLJ_B3814 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00270 Cysteine and methionine metabolism [PATH:cbi00270]
D CLJ_B0254 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CLJ_B1220 cysK_2; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJ_B0790 cysteine synthase family protein K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJ_B0253 cysK_1; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CLJ_B0792 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJ_B1515 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJ_B2169 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJ_B1734 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLJ_B0212 metK_1; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLJ_0017 metK_2; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLJ_B3649 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLJ_B1573 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D CLJ_B1310 mtnK; S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100]
D CLJ_B2759 conserved hypothetical protein TIGR00726 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CLJ_B1311 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D CLJ_B0032 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CLJ_B3162 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D CLJ_B0791 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLJ_B2634 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B1749 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B3619 lysC; aspartate kinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B3423 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLJ_B2061 hom_2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJ_B1750 hom_1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJ_B2060 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CLJ_B2062 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CLJ_B0953 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJ_B2983 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJ_B2623 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1982 aspB_1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1059 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B0845 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CLJ_B1617 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLJ_B1207 aspD; aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D CLJ_B1255 sdhB; L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLJ_B1256 sdhA; L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CLJ_B1174 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:cbi00280]
D CLJ_B0953 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJ_B2983 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B3471 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cbi00290]
D CLJ_B3814 ilvA; threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CLJ_B0345 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLJ_B0953 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJ_B2983 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00300 Lysine biosynthesis [PATH:cbi00300]
D CLJ_B2061 hom_2; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJ_B1750 hom_1; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CLJ_B2634 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B1749 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B3619 lysC; aspartate kinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B3423 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLJ_B3424 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLJ_B0844 dapB_1; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLJ_B3425 dapB_2; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLJ_B3427 putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CLJ_B3626 putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLJ_B2114 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLJ_B3618 lysA; diaminopimelate decarboxilase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CLJ_B1980 aminotransferase, classes I and II K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D CLJ_B1559 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLJ_B1560 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cbi00310]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJ_B3081 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cbi00220]
D CLJ_B2823 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CLJ_B2901 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLJ_B2900 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLJ_B1694 arcA_2; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D CLJ_B0099 arcA_1; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D CLJ_B3035 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLJ_B3894 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJ_B2950 ATP-grasp domain protein K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CLJ_B2824 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D CLJ_B1989 gluD; glutamate dehydrogenase, NAD-specific K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CLJ_B2623 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1982 aspB_1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1059 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:cbi00330]
D CLJ_B3714 putative creatinine amidohydrolase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D CLJ_0028 creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10]
D CLJ_B2277 codA; cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D CLJ_B3383 Orn/Lys/Arg decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CLJ_B0937 peptidyl-arginine deiminase, Porphyromonas-type K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CLJ_B3649 speD; S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLJ_B2137 spermine/spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CLJ_B1215 acetyltransferase, GNAT family K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D CLJ_B1237 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLJ_B3454 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CLJ_B2247 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CLJ_B3455 formate acetyltransferase K23121 pflD; trans-4-hydroxy-L-proline dehydratase [EC:4.2.1.172]
D CLJ_B2623 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1982 aspB_1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1059 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B2701 prdF; proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D CLJ_B2691 prdA_1; D-proline reductase, PrdA proprotein K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLJ_B2707 prdA_2; D-proline reductase, PrdA proprotein K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLJ_B2705 putative D-proline reductase, PrdB subunit, selenocysteine-containing K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D CLJ_B2689 prdB; D-proline reductase, PrdB subunit, selenocysteine-containing K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
C 00340 Histidine metabolism [PATH:cbi00340]
D CLJ_B1673 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CLJ_B1672 hisZ; ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D CLJ_B1680 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D CLJ_B1677 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CLJ_B1676 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CLJ_B1679 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CLJ_B1675 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D CLJ_B1678 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLJ_B2801 hisJ; histidinol-phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D CLJ_B1674 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLJ_B1237 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
C 00350 Tyrosine metabolism [PATH:cbi00350]
D CLJ_B2623 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1982 aspB_1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1059 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1678 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLJ_B1237 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLJ_B0401 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJ_B3564 D-lactate dehydrogenase K23109 fldH; aromatic 2-oxoacid reductase [EC:1.1.1.110]
C 00360 Phenylalanine metabolism [PATH:cbi00360]
D CLJ_B1237 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLJ_0027 phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D CLJ_B3473 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLJ_B2623 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1982 aspB_1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1059 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1678 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLJ_B3436 acetyltransferase, GNAT family K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D CLJ_B3564 D-lactate dehydrogenase K23109 fldH; aromatic 2-oxoacid reductase [EC:1.1.1.110]
D CLJ_B2374 enr; 2-enoate reductase K10797 enr; 2-enoate reductase [EC:1.3.1.31]
C 00380 Tryptophan metabolism [PATH:cbi00380]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJ_B1237 putative flavin containing amine oxidoreductase K00274 MAO; monoamine oxidase [EC:1.4.3.4]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLJ_B3564 D-lactate dehydrogenase K23109 fldH; aromatic 2-oxoacid reductase [EC:1.1.1.110]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cbi00400]
D CLJ_B1574 aroF; 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CLJ_B1572 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CLJ_B2347 putative 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CLJ_B2085 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CLJ_B2086 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CLJ_B1575 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CLJ_B3274 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CLJ_B1987 aroH; chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D CLJ_B3267 putative ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D CLJ_B2623 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1982 aspB_1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1059 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1678 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cbi00410]
D CLJ_B0492 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CLJ_B2119 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLJ_B0493 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CLJ_B3047 pyridine nucleotide-disulphide oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D CLJ_B3046 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLJ_B3140 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJ_B3471 bcd; butyryl-CoA dehydrogenase K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cbi00430]
D CLJ_B2119 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLJ_B1989 gluD; glutamate dehydrogenase, NAD-specific K00260 gudB; glutamate dehydrogenase [EC:1.4.1.2]
D CLJ_B2685 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CLJ_B2684 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:cbi00440]
D CLJ_B0727 PHP domain protein K20859 phnPP; phosphoribosyl 1,2-cyclic phosphate 1,2-diphosphodiesterase [EC:3.1.4.57]
C 00450 Selenocompound metabolism [PATH:cbi00450]
D CLJ_B0792 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJ_B1515 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJ_B2169 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJ_B1734 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLJ_B0032 megL; methionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D CLJ_B3741 gidA_2; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLJ_B1297 putative thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLJ_B1302 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CLJ_B3138 oxidoreductase, pyridine nucleotide-disulfide family K12527 ygfK; putative selenate reductase [EC:1.97.1.9]
D CLJ_B3233 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLJ_B0113 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cbi00460]
D CLJ_B2747 ansA; L-asparaginase, type II K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CLJ_B1606 asnA; aspartate--ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D CLJ_B2825 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cbi00470]
D CLJ_B3701 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJ_B1854 alr_1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJ_B0526 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLJ_B3035 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLJ_B3893 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLJ_B3840 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLJ_B2114 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CLJ_B3618 lysA; diaminopimelate decarboxilase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CLJ_B2179 alanine racemase, N-terminal domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
D CLJ_B2206 alanine racemase, N-terminal domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
D CLJ_B2701 prdF; proline racemase K01777 prdF; proline racemase [EC:5.1.1.4]
D CLJ_B2691 prdA_1; D-proline reductase, PrdA proprotein K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLJ_B2707 prdA_2; D-proline reductase, PrdA proprotein K10793 prdA; D-proline reductase (dithiol) PrdA [EC:1.21.4.1]
D CLJ_B2705 putative D-proline reductase, PrdB subunit, selenocysteine-containing K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
D CLJ_B2689 prdB; D-proline reductase, PrdB subunit, selenocysteine-containing K10794 prdB; D-proline reductase (dithiol) PrdB [EC:1.21.4.1]
C 00480 Glutathione metabolism [PATH:cbi00480]
D CLJ_B2443 pepD_2; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLJ_B3122 pepD_3; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLJ_B1502 pepD_1; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
D CLJ_B1240 O-glycosyl hydrolase, family 30 K01201 GBA; glucosylceramidase [EC:3.2.1.45]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cbi00542]
D CLJ_B0186 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cbi00541]
D CLJ_B3379 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CLJ_B2909 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJ_B3007 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJ_B2293 NAD-dependent epimerase/dehydratase family protein K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CLJ_B2915 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9]
D CLJ_B2269 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJ_B2270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D CLJ_B0471 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D CLJ_B0140 putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D CLJ_B3875 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CLJ_B0187 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLJ_B2947 sialic acid synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CLJ_B3374 UDP-glucose/GDP-mannose dehydrogenase family K13015 wbpA; UDP-N-acetyl-D-glucosamine dehydrogenase [EC:1.1.1.136]
D CLJ_B3373 oxidoreductase, NAD-binding Rossmann fold family K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D CLJ_B0876 putative pleiotropic regulatory protein DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CLJ_B3366 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:cbi00550]
D CLJ_B0198 murA_1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJ_B3896 murA_2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJ_B3681 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLJ_B3878 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLJ_B3840 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLJ_B1559 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLJ_B0526 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLJ_B1560 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLJ_B2655 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJ_B1442 putative undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJ_B0473 uppP_2; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJ_B0374 uppP_1; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJ_B0406 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJ_B1561 mraY_2; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLJ_B0927 mraY_1; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLJ_B2988 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLJ_B3348 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLJ_0270 penicillin-binding protein 1A K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CLJ_B3257 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLJ_B1558 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLJ_B3686 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CLJ_B2032 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJ_B2026 putative D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJ_B1521 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJ_B1034 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B1080 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B0688 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B0470 putative UDP-N-acetylmuramyl tripeptide synthetase K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
D CLJ_B0469 glutamine amidotransferase, CobB/CobQ family K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13]
C 00552 Teichoic acid biosynthesis [PATH:cbi00552]
D CLJ_B0473 uppP_2; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJ_B0374 uppP_1; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJ_B0406 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJ_B0186 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLJ_B3358 teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLJ_B2934 putative capsular polysaccharide synthesis protein K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D CLJ_B3239 putative cell envelope-related function transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLJ_B2920 cell envelope-related transcriptional attenuator domain protein K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D CLJ_B0165 conserved hypothetical protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLJ_B3115 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D CLJ_B0680 sulfatase family protein K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cbi00543]
D CLJ_B0186 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLJ_B3311 membrane-bound O-acyltransferase family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D CLJ_B0254 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cbi00730]
D CLJ_B3165 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CLJ_B0523 thiD_1; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CLJ_B0820 thiD_2; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CLJ_B1223 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJ_B2798 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJ_B3912 putative thiazole biosynthesis protein K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CLJ_B2068 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLJ_B0522 thiM_1; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLJ_B2463 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLJ_B0521 thiE; thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CLJ_B3148 conserved hypothetical protein K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15]
D CLJ_B2733 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLJ_B2731 thiamine diphosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D CLJ_B3768 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLJ_B0819 thiamine pyridinylase I K10811 E2.5.1.2; thiamine pyridinylase [EC:2.5.1.2]
C 00740 Riboflavin metabolism [PATH:cbi00740]
D CLJ_B3118 riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLJ_B3120 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLJ_B3117 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CLJ_B3119 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CLJ_B2639 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CLJ_B0522 thiM_1; hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLJ_B2463 putative hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D CLJ_B2042 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D CLJ_B0547 hydrolase, NUDIX family K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:cbi00750]
D CLJ_B1504 pyridoxine kinase family protein K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D CLJ_B1747 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cbi00760]
D CLJ_B1550 putative L-aspartate oxidase NadB K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D CLJ_B1551 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D CLJ_B1549 nadC; nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D CLJ_B1527 putative nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CLJ_B2037 punA; purine nucleoside phosphorylase I, inosine and guanosine-specific K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D CLJ_B0281 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CLJ_B3241 nadD; nicotinate nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CLJ_B0042 hydrolase, NUDIX family K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D CLJ_B0614 nadE; glutamine-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D CLJ_B1181 pncA family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D CLJ_B0080 NAD-dependent deacetylase, Sir2 family K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CLJ_B2066 ppnK; ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cbi00770]
D CLJ_B0345 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CLJ_B0494 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CLJ_B1211 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D CLJ_B0493 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CLJ_B3846 coaX; pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CLJ_B2742 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CLJ_B2723 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CLJ_B3272 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CLJ_B3704 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CLJ_B2822 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D CLJ_B0953 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJ_B2983 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJ_B3047 pyridine nucleotide-disulphide oxidoreductase family protein K17722 preT; dihydropyrimidine dehydrogenase (NAD+) subunit PreT [EC:1.3.1.1]
D CLJ_B3046 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D CLJ_B3140 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJ_B0492 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cbi00780]
D CLJ_B3928 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLJ_B0579 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJ_B3929 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJ_B3926 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLJ_B2471 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CLJ_B2472 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLJ_B3911 radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D CLJ_B1166 birA; biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cbi00785]
D CLJ_B0773 putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CLJ_B1744 putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B1742 acoC; TPP-dependent acetoin dehydrogenase complex, E2 component, dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D CLJ_B0770 gcvPA; glycine cleavage system P protein, subunit 1 K00282 gcvPA; glycine cleavage system P protein (glycine dehydrogenase) subunit 1 [EC:1.4.4.2]
D CLJ_B0771 gcvPB; glycine cleavage system P protein, subunit 2 K00283 gcvPB; glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:1.4.4.2]
D CLJ_B0768 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLJ_B0769 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:cbi00790]
D CLJ_B1666 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CLJ_B0872 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K13940 sulD; dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:4.1.2.25 2.7.6.3]
D CLJ_B0870 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CLJ_B3434 folC; dihydrofolate synthase/tetrahydrofolylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CLJ_B3118 riboflavin biosynthesis protein ribAB K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CLJ_B1664 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLJ_B0869 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLJ_B1665 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CLJ_B1667 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CLJ_B0598 metallo-beta-lactamase family protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D CLJ_B2599 metallo-beta-lactamase family protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D CLJ_B1113 metallo-beta-lactamase family protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D CLJ_B2144 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLJ_B2143 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLJ_B2147 mog; molybdopterin biosynthesis enzyme Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CLJ_B2145 putative molybdopterin biosynthesis enzyme MoeA / molybdate binding domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLJ_B2146 moeA; molybdopterin biosynthesis enzyme MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CLJ_B3083 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D CLJ_B3145 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
C 00670 One carbon pool by folate [PATH:cbi00670]
D CLJ_B3847 fhs; formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D CLJ_B1213 folD; methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CLJ_B1212 putative methenyltetrahydrofolate cyclohydrolase K01500 fchA; methenyltetrahydrofolate cyclohydrolase [EC:3.5.4.9]
D CLJ_B2825 glyA; glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CLJ_B3129 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CLJ_B3128 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLJ_B2739 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLJ_B0768 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D CLJ_B1734 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D CLJ_B0817 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D CLJ_B3811 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CLJ_B1732 metF; methylenetetrahydrofolate reductase (NAD(P)H) K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CLJ_B2837 5-formyltetrahydrofolate cyclo-ligase family protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cbi00860]
D CLJ_B1143 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJ_B0974 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLJ_B0971 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CLJ_B2455 uroporphyrinogen decarboxylase family protein K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CLJ_B1069 conserved hypothetical protein K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D CLJ_B0972 cobA_hemD; uroporphyrinogen III synthase/methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D CLJ_B0970 precorrin-2 dehydrogenase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D CLJ_B1003 cbiK; anaerobic sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D CLJ_B0996 cobI; precorrin-2 C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D CLJ_B0999 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D CLJ_B0997 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D CLJ_B0998 CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D CLJ_B1000 cobK; precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D CLJ_B0986 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D CLJ_B0989 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196]
D CLJ_B0987 cbiE; precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D CLJ_B0977 cobH; precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D CLJ_B0975 cobB; cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D CLJ_B1005 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D CLJ_B0964 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D CLJ_B0965 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D CLJ_B0958 bifunctional adenosylcobalamin biosynthesis protein CobU K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D CLJ_B0863 cobS; cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D CLJ_B0861 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D CLJ_B1004 putative kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177]
D CLJ_B0966 aminotransferase family protein K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cbi00130]
D CLJ_B0889 flavodoxin-like fold domain protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cbi00900]
D CLJ_B2068 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CLJ_B2651 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CLJ_B3816 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D CLJ_B0159 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CLJ_B0100 ispF; 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D CLJ_B2649 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CLJ_B1985 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJ_B2070 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLJ_B2655 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJ_B1442 putative undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CLJ_B3697 transketolase, pyridine binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CLJ_B3698 transketolase, thiamine diphosphate binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cbi00523]
D CLJ_B2269 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJ_B2270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D CLJ_B2270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:cbi00261]
D CLJ_B2634 dapG; aspartate kinase 1 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B1749 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B3619 lysC; aspartate kinase 2 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CLJ_B3423 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CLJ_B3424 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CLJ_B0844 dapB_1; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CLJ_B3425 dapB_2; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cbi00521]
D CLJ_B1711 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
D CLJ_B3381 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B3958 phosphoglucomutase/phosphomannomutase family protein K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D CLJ_B2269 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJ_B2270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D CLJ_B1711 putative glucokinase K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cbi00525]
D CLJ_B2269 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D CLJ_B2270 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cbi00401]
D CLJ_B2623 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1982 aspB_1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1059 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1678 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CLJ_B2388 phenazine biosynthesis protein, PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
C 00333 Prodigiosin biosynthesis
D CLJ_B3930 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLJ_B0579 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJ_B3929 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CLJ_B2680 acpP_1; acyl carrier protein K02078 acpP; acyl carrier protein
D CLJ_B3932 acpP_2; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D CLJ_B0212 metK_1; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CLJ_0017 metK_2; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
D CLJ_B2179 alanine racemase, N-terminal domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
D CLJ_B2206 alanine racemase, N-terminal domain protein K21898 orr; ornithine racemase [EC:5.1.1.12]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cbi00362]
D CLJ_B3473 hbd; 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D CLJ_B3081 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cbi00625]
D CLJ_B0401 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D CLJ_B1148 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D CLJ_B0762 nifH; nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D CLJ_B1070 HAD hydrolase, family IA K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D CLJ_B1070 HAD hydrolase, family IA K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
D CLJ_B1446 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJ_B2428 carbon monoxide dehydrogenase K00198 cooS; anaerobic carbon-monoxide dehydrogenase catalytic subunit [EC:1.2.7.4]
D CLJ_B1447 nitrate reductase, iron-sulfur subunit K00196 cooF; anaerobic carbon-monoxide dehydrogenase iron sulfur subunit
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:cbi00626]
D CLJ_B0401 adhE; aldehyde-alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cbi03020]
D CLJ_B3797 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLJ_B3796 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLJ_B3760 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLJ_B2743 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D CLJ_B0588 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cbi03010]
D CLJ_0210 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLJ_B1201 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLJ_B1985 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLJ_B2660 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLJ_B3783 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLJ_B3761 rpsD_2; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLJ_B3710 rpsD_1; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLJ_B3772 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLJ_B3967 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLJ_B3793 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLJ_B3775 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLJ_B3753 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLJ_B3790 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLJ_B3762 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLJ_B3794 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLJ_B3763 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLJ_B3776 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLJ_B2638 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLJ_B2673 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLJ_B3780 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLJ_B3965 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLJ_B3785 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLJ_B3224 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLJ_B3210 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CLJ_B3800 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLJ_B3786 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLJ_B3789 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLJ_B3788 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLJ_B3777 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLJ_B3774 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLJ_B3798 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLJ_B3961 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLJ_B3799 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLJ_B3801 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLJ_B3754 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLJ_B3779 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLJ_B3770 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLJ_B3782 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLJ_B3759 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLJ_B3773 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLJ_B2669 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLJ_B3401 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLJ_B3246 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLJ_B3784 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLJ_B3787 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLJ_B3778 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLJ_B3490 rplY_2; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLJ_B3382 rplY_1; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLJ_B3244 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLJ_B2728 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLJ_B3781 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLJ_B3771 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLJ_B0173 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLJ_B2682 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLJ_B3804 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CLJ_B3987 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLJ_B3402 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLJ_B3764 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CLJ_B3795 ribosomal protein L7Ae family protein K07590 RP-L7A; large subunit ribosomal protein L7A
D CLJ_B0008 rrs_1; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0056 rrs_3; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0063 rrs_4; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B3833 rrs_8; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B3839 rrs_9; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0070 rrs_5; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0475 rrs_7; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0049 rrs_2; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0076 rrs_6; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0051 rrl_2; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0010 rrl_1; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B3830 rrl_8; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0072 rrl_5; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B3837 rrl_9; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0065 rrl_4; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0078 rrl_6; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0480 rrl_7; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0058 rrl_3; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0011 rrf_1; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B3829 rrf_8; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0052 rrf_2; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0059 rrf_3; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0073 rrf_5; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0079 rrf_6; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0066 rrf_4; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B3836 rrf_9; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0481 rrf_7; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cbi00970]
D CLJ_B0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJ_B3834 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJ_B0476 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJ_B0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3523 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3531 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3538 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3519 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3828 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJ_B3827 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJ_B0482 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJ_B3413 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJ_B3940 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJ_B3943 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJ_B3947 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJ_B0081 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLJ_B3410 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLJ_B0234 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJ_B3528 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJ_B3536 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJ_B3942 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJ_B3945 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJ_B3949 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJ_B0551 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJ_B3411 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3533 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3520 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3524 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3532 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3539 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3807 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3529 tRNA-His K14226 tRNA-His; tRNA His
D CLJ_B3537 tRNA-His K14226 tRNA-His; tRNA His
D CLJ_B0477 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLJ_B3832 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLJ_B3855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3858 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3526 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3534 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3530 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B3522 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B0053 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B3535 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B0060 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B3527 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3835 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3852 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3856 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3853 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3854 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3857 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B0067 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJ_B3412 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJ_B0074 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJ_B3521 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJ_B3880 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJ_B3540 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJ_B0023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0024 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0205 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B3946 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B3939 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B0208 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B3806 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B3597 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLJ_B0206 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLJ_B0209 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLJ_B0207 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3948 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3941 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3944 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3414 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3231 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CLJ_B1143 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJ_B3547 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLJ_B3546 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLJ_B3548 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLJ_B2794 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLJ_B3319 aspS_2; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLJ_B1064 aspS_1; aspartate--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D CLJ_B0683 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLJ_B3841 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLJ_B3405 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLJ_B0587 serS_2; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLJ_B0021 serS_1; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLJ_B3233 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CLJ_B3813 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLJ_B0113 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLJ_B2739 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CLJ_B3435 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLJ_B0232 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLJ_B0137 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLJ_B3842 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLJ_B1122 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLJ_B3815 putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLJ_B3627 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLJ_B3320 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLJ_B3397 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLJ_B3396 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLJ_B3605 tyrS_2; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJ_B1244 tyrS_1; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJ_B3613 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cbi03060]
D CLJ_B3769 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLJ_B3803 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLJ_B0279 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLJ_B3328 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CLJ_B3327 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CLJ_B3332 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLJ_B3984 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJ_B0217 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLJ_B2674 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLJ_B0035 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CLJ_B2676 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLJ_B0662 lepB_1; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLJ_B2668 lepB_2; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLJ_B1029 signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CLJ_B1577 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cbi04122]
D CLJ_B1223 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJ_B2798 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJ_B0845 rhodanese domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D CLJ_B1226 trmU_1; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLJ_B3159 trmU_2; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLJ_B2144 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CLJ_B2139 moaD; molybdopterin converting factor subunit 1 K03636 moaD; sulfur-carrier protein
D CLJ_B1188 putative thiosulfate sulfurtransferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11]
D CLJ_B2138 moeB; molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D CLJ_B2143 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CLJ_B2147 mog; molybdopterin biosynthesis enzyme Mog K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cbi03018]
D CLJ_B0278 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJ_B2637 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLJ_B0713 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CLJ_B0280 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLJ_B3029 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B1960 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B1958 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B2215 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B1040 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLJ_B0172 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLJ_B2628 HDIG/HD/KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLJ_B2789 RNA-metabolizing metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLJ_B1341 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLJ_B3676 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJ_B3216 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLJ_B3579 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJ_B1975 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cbi03030]
D CLJ_B0305 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJ_B3677 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJ_B2648 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJ_B0036 dnaX_1; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_0096 dnaX_2; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_B0090 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJ_B3225 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_0099 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_0039 dnaN_2; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B0002 dnaN_1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B3959 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLJ_0204 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLJ_B3195 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLJ_0120 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLJ_0038 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_0088 ssb_2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B3966 ssb_1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B0451 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B0460 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CLJ_B2666 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLJ_B3273 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJ_B3551 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cbi03410]
D CLJ_B3584 putative 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLJ_B0257 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLJ_B1308 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLJ_B0054 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLJ_B0111 udgA; uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLJ_B1583 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLJ_B2992 AP endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLJ_B3273 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJ_B2991 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLJ_B3551 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cbi03420]
D CLJ_B3869 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLJ_B3689 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLJ_B3690 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CLJ_B3683 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CLJ_B3476 GIY-YIG domain protein K03703 uvrC; excinuclease ABC subunit C
D CLJ_B3552 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_0310 putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B3624 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B1434 helicase, UvrD/REP/exonuclease family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B1531 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B3158 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B3273 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJ_B3551 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLJ_B0588 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:cbi03430]
D CLJ_B1978 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLJ_B3388 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLJ_B0710 MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLJ_B1977 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D CLJ_B3552 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_0310 putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B3624 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B1434 helicase, UvrD/REP/exonuclease family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B1531 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B3158 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B2072 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLJ_B2071 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLJ_B2991 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLJ_0038 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_0088 ssb_2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B3966 ssb_1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B0451 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B3677 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJ_B2648 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJ_0039 dnaN_2; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B0002 dnaN_1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B0036 dnaX_1; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_0096 dnaX_2; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_B3225 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_0099 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_B0090 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJ_B0305 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJ_B3551 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cbi03440]
D CLJ_B2991 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLJ_0038 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_0088 ssb_2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B3966 ssb_1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B0451 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B0004 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLJ_B0038 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CLJ_B2629 recA; recA protein K03553 recA; recombination protein RecA
D CLJ_B3273 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJ_B3336 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLJ_B3335 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLJ_B2725 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLJ_B0213 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLJ_B3677 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJ_B2648 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJ_0039 dnaN_2; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B0002 dnaN_1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B0036 dnaX_1; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_0096 dnaX_2; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_B3225 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_0099 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_B0090 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJ_B0305 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJ_B2741 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cbi02010]
D CLJ_B2150 tupA; tungstate ABC transporter, tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CLJ_B2149 putative tungstate ABC transporter, permease protein TupB K05773 tupB; tungstate transport system permease protein
D CLJ_B2148 putative tungstate ABC transporter, ATP-binding protein TupC K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CLJ_B1586 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLJ_B1587 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLJ_B1588 putative molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLJ_B1195 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CLJ_B1196 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CLJ_B1197 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLJ_B0647 potCD; spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLJ_B0646 potB; spermidine/putrescine ABC transporter, permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D CLJ_B0645 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLJ_B1746 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLJ_B1745 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLJ_B1613 carbohydrate uptake ABC transporter, CUT1 family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLJ_B0267 lipoprotein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D CLJ_B0269 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CLJ_B0270 sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D CLJ_B0268 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CLJ_B1315 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CLJ_B1313 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D CLJ_B1312 ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLJ_B0442 phosphate uptake ABC transporter, PhoT family, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLJ_B2756 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLJ_B2755 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CLJ_B0444 pstA_1; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLJ_B2754 pstA_2; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLJ_B2753 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLJ_B0445 phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLJ_B1222 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLJ_B1221 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLJ_B1517 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CLJ_B2220 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CLJ_B0527 putative high-affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CLJ_B0528 high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CLJ_B0529 putative high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CLJ_B0530 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CLJ_B0531 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CLJ_B1135 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLJ_B1136 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLJ_B1603 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLJ_B1134 methionine ABC transporter, MUT family, permease protein K02072 metI; D-methionine transport system permease protein
D CLJ_B1602 methionine ABC transporter, MUT family, permease protein K02072 metI; D-methionine transport system permease protein
D CLJ_B1133 methionine ABC transporter, MUT family, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CLJ_B1601 methionine ABC transporter, MUT family, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CLJ_B3422 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJ_B3545 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJ_B3421 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CLJ_B3420 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CLJ_B3419 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CLJ_B3418 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CLJ_B1480 periplasmic solute binding protein family K09815 znuA; zinc transport system substrate-binding protein
D CLJ_B1478 putative metal ion ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CLJ_B1479 putative metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLJ_B0968 cbiN; cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D CLJ_B0967 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLJ_B0969 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLJ_B0954 transmembrane protein BioY K03523 bioY; biotin transport system substrate-specific component
D CLJ_B2473 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CLJ_B2176 putative ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D CLJ_B3756 cobalt transport permease, CbiQ family K16785 ecfT; energy-coupling factor transport system permease protein
D CLJ_B3758 putative cobalt ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJ_B3757 putative cobalt ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJ_B2449 putative sodium extrusion protein NatB K09696 natB; sodium transport system permease protein
D CLJ_B2450 putative sodium extrusion ATP-binding protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLJ_B2591 putative membrane protein K19310 bcrB; bacitracin transport system permease protein
D CLJ_B2593 antibiotic ABC transporter, ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CLJ_B0295 conserved hypothetical protein K11632 bceB; bacitracin transport system permease protein
D CLJ_B1507 peptide ABC transporter, Pep4E family, permease protein K11632 bceB; bacitracin transport system permease protein
D CLJ_B0294 bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein
D CLJ_B1506 peptide ABC transporter, Pep4E family, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CLJ_B1690 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLJ_B1691 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLJ_B1689 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJ_B3693 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein
D CLJ_0271 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D CLJ_B3694 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLJ_0272 methionine import ATP-binding protein MetN K09812 ftsE; cell division transport system ATP-binding protein
D CLJ_B3015 ABC transporter, permease protein K16919 ytrC_D; acetoin utilization transport system permease protein
D CLJ_B3016 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D CLJ_B1643 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLJ_B1708 ABC transporter ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLJ_B2588 putative ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLJ_B1644 putative multidrug export ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLJ_B1709 ABC transporter ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLJ_B2587 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLJ_B2159 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJ_B2135 putative ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJ_B2158 putative ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJ_B2134 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJ_B0634 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CLJ_B3098 drug resistance ABC transporter, RA2 family, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cbi02060]
D CLJ_B3746 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLJ_B2622 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CLJ_B1441 ptsG; PTS system, glucose-specific, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLJ_B2981 PTS system, glucose family, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLJ_B0333 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B3064 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0325 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0344 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B3065 nagE; PTS system, N-acetylglucosamine-specific, IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLJ_B0322 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B0342 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B1713 PTS system, glucose/glucoside family, IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLJ_B1462 PTS system, IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLJ_B0726 PTS system, beta-glucoside-specific, IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLJ_B0331 PTS system, glucose/glucoside family, IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLJ_B2192 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLJ_B3642 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLJ_B3643 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLJ_B3645 PTS system, lactose/cellobiose family, IIC component K02761 celB; cellobiose PTS system EIIC component
D CLJ_B3078 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D CLJ_B3079 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D CLJ_B3721 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLJ_B3722 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLJ_B3723 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CLJ_B2360 putative PTS system, L-ascorbate family, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLJ_B2359 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLJ_B2358 putative PTS system, L-ascorbate family, IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CLJ_B1944 pfkB_1; 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cbi03070]
D CLJ_B3328 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CLJ_B3327 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CLJ_B3803 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLJ_B0279 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLJ_B3769 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLJ_B3332 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLJ_B3984 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJ_B0217 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLJ_B2676 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLJ_B2674 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLJ_0213 ATPase involved in conjugal plasmid transfer K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cbi02020]
D CLJ_B2757 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLJ_B2758 putative phosphate regulon DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJ_B0408 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJ_B0442 phosphate uptake ABC transporter, PhoT family, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLJ_B2756 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLJ_B0351 sensor histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D CLJ_B0350 DNA-binding response regulator K07770 cssR; two-component system, OmpR family, response regulator CssR
D CLJ_B3871 peptidase, S1B family K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJ_B2898 flagellin K02406 fliC; flagellin
D CLJ_B2926 fliC; flagellin K02406 fliC; flagellin
D CLJ_B2957 flagellin K02406 fliC; flagellin
D CLJ_B2958 flagellin K02406 fliC; flagellin
D CLJ_B0289 flagellin protein K02406 fliC; flagellin
D CLJ_B2873 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D CLJ_B2884 motA_2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B2438 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B1015 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D CLJ_B0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLJ_B0294 bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein
D CLJ_B1506 peptide ABC transporter, Pep4E family, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CLJ_B0295 conserved hypothetical protein K11632 bceB; bacitracin transport system permease protein
D CLJ_B1507 peptide ABC transporter, Pep4E family, permease protein K11632 bceB; bacitracin transport system permease protein
D CLJ_B0293 periplasmic sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJ_B0292 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CLJ_B0373 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLJ_B1510 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLJ_B0372 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLJ_B1509 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLJ_B0375 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLJ_B1511 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLJ_B0376 peptide ABC transporter, Pep4E family, permease protein K11636 yxdM; putative ABC transport system permease protein
D CLJ_B1512 peptide ABC transporter, Pep4E family, permease protein K11636 yxdM; putative ABC transport system permease protein
D CLJ_B2173 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJ_B2174 DNA-binding response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLJ_B0421 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJ_B1034 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B1080 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B0688 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B2613 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLJ_B2614 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLJ_B2128 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJ_B1693 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJ_B1692 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJ_B2129 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJ_B2234 putative lantibiotic ABC transporter,ATP-binding protein K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D CLJ_B1689 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJ_B1690 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLJ_B1691 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLJ_B2058 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLJ_B0258 malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D CLJ_B2450 putative sodium extrusion ATP-binding protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLJ_B2449 putative sodium extrusion protein NatB K09696 natB; sodium transport system permease protein
D CLJ_B0387 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLJ_B0394 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLJ_B0388 putative autoinducer prepeptide K07800 agrD; AgrD protein
D CLJ_B0395 hypothetical protein K07800 agrD; AgrD protein
D CLJ_B1229 sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLJ_B1228 DNA-binding response regulator, LytTr family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLJ_B2964 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLJ_0201 putative type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLJ_0231 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLJ_0228 bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D CLJ_B3894 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJ_B3081 CoA-transferase, A subunit K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJ_B0272 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLJ_B2094 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D CLJ_B2976 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLJ_B3022 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0457 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0508 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0633 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0644 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0784 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0765 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1624 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1953 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1472 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1668 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B2121 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3032 putative methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B2204 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B2972 putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLJ_B2979 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLJ_B2975 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJ_B1043 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJ_B2973 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJ_B2977 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLJ_B1957 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLJ_B1006 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJ_B1453 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJ_B0696 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLJ_B0695 response regulator K07719 glnL; two-component system, response regulator GlnL
D CLJ_B3035 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D CLJ_B0187 mnaA; UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D CLJ_B2969 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cbi02024]
D CLJ_B0791 luxS; S-ribosylhomocysteinase LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CLJ_B1975 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CLJ_B2388 phenazine biosynthesis protein, PhzF family K06998 phzF; trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17]
D CLJ_B2119 glutamate decarboxylase K01580 E4.1.1.15; glutamate decarboxylase [EC:4.1.1.15]
D CLJ_B2699 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D CLJ_B0399 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D CLJ_B1155 putative ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLJ_B1157 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLJ_B1156 putative polyamine transport system, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLJ_B1158 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLJ_B0527 putative high-affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CLJ_B0528 high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CLJ_B0529 putative high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CLJ_B0530 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CLJ_B0531 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CLJ_B2814 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLJ_B1006 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJ_B1453 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJ_B3120 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CLJ_B1652 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJ_B0902 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJ_B3664 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJ_B3918 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJ_B0388 putative autoinducer prepeptide K07800 agrD; AgrD protein
D CLJ_B0395 hypothetical protein K07800 agrD; AgrD protein
D CLJ_B0387 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLJ_B0394 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLJ_B1229 sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLJ_B1228 DNA-binding response regulator, LytTr family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLJ_B3422 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJ_B3545 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJ_B3421 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CLJ_B3420 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CLJ_B3419 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CLJ_B3418 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CLJ_B1268 putative oligopeptide ABC transporter, oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJ_B1864 peptide/opine/nickel uptake ABC transporter, PepT family, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJ_B0856 methyl-accepting chemotaxis protein/bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJ_B1473 peptide/opine/nickel uptake ABC transporter, PepT family, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJ_B1267 putative oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJ_B1865 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJ_B1474 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJ_B1266 putative oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJ_B1866 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJ_B1475 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJ_B1867 peptide/opine/nickel uptake ABC transporter, PepT family, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLJ_B3984 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJ_B3803 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLJ_B0279 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLJ_B3769 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLJ_B3332 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLJ_B0217 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLJ_B2676 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLJ_B2674 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLJ_B2058 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLJ_B2864 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLJ_B2234 putative lantibiotic ABC transporter,ATP-binding protein K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D CLJ_B2128 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJ_B1693 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJ_B1692 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJ_B2129 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJ_B1689 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJ_B1690 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLJ_B1691 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLJ_B1651 hypothetical Membrane Spanning Protein
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cbi02030]
D CLJ_B3022 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0457 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0508 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0633 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0644 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0784 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0765 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1624 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1953 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1472 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1668 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B2121 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3032 putative methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B2204 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1315 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CLJ_B2975 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJ_B2972 putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLJ_B2979 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLJ_B1043 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJ_B2973 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJ_B2974 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CLJ_B1966 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D CLJ_B2977 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLJ_B1957 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLJ_B2978 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLJ_B2976 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLJ_B2893 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLJ_B2971 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLJ_B2970 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLJ_B2884 motA_2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B2438 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B2883 motB_2; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cbi02040]
D CLJ_B2895 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLJ_B2894 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLJ_B2893 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLJ_B2892 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLJ_B2891 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLJ_B2890 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CLJ_B2889 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CLJ_B2882 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CLJ_B2971 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLJ_B2970 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLJ_B2881 flagellar biosynthesis domain protein K02418 fliO; flagellar protein FliO/FliZ
D CLJ_B2880 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLJ_B2879 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLJ_B2877 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLJ_B2878 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLJ_B2897 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLJ_B2896 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CLJ_B2888 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLJ_B2886 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CLJ_B2870 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CLJ_B2869 flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D CLJ_B2967 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CLJ_B2966 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLJ_B2898 flagellin K02406 fliC; flagellin
D CLJ_B2926 fliC; flagellin K02406 fliC; flagellin
D CLJ_B2957 flagellin K02406 fliC; flagellin
D CLJ_B2958 flagellin K02406 fliC; flagellin
D CLJ_B0289 flagellin protein K02406 fliC; flagellin
D CLJ_B2960 fliD; Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CLJ_B2961 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLJ_B2884 motA_2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B2438 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B2883 motB_2; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLJ_B2969 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLJ_B3194 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CLJ_0244 putative sporulation sigma factor SigK K03086 rpoD; RNA polymerase primary sigma factor
D CLJ_0258 putative DNA-directed RNA polymerase specialized sigma subunit K03086 rpoD; RNA polymerase primary sigma factor
D CLJ_B0272 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLJ_B2873 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CLJ_B0278 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D CLJ_B1734 putative 5-methyltetrahydrofolate--homocysteine methyltransferase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cbi01501]
D CLJ_B3422 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJ_B3545 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJ_B3421 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CLJ_B3420 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CLJ_B3419 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CLJ_B3418 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CLJ_B3348 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLJ_B3257 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cbi01502]
D CLJ_B2173 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJ_B2174 DNA-binding response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLJ_B0421 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJ_B0526 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLJ_B3701 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJ_B1854 alr_1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJ_B1560 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CLJ_B1561 mraY_2; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLJ_B0927 mraY_1; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLJ_B2988 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLJ_B1034 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B1080 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B0688 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cbi01503]
D CLJ_B1535 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B2508 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3376 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3751 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B1929 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3377 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B1846 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B2050 peptidoglycan-binding domain 1 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3871 peptidase, S1B family K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cbi01000]
C 01001 Protein kinases [BR:cbi01001]
D CLJ_B2734 histidine kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CLJ_B2105 serine/Threonine protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D CLJ_B2917 capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLJ_B2757 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLJ_B0351 sensor histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D CLJ_B0293 periplasmic sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJ_B0373 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLJ_B1510 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLJ_B2173 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJ_B2613 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLJ_B2128 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJ_B1693 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJ_B1229 sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLJ_B3590 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLJ_B2975 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJ_B0696 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cbi01009]
D CLJ_B2162 leucine-rich repeat protein K17550 PPP1R7; protein phosphatase 1 regulatory subunit 7
D CLJ_B3676 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJ_B2190 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
D CLJ_B2735 protein phosphatase family protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
C 01002 Peptidases and inhibitors [BR:cbi01002]
D CLJ_B1029 signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CLJ_B1577 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CLJ_B1429 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLJ_0218 putative type IV leader peptidase K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D CLJ_B3223 gpr; GPR endopeptidase K06012 gpr; spore protease [EC:3.4.24.78]
D CLJ_B2764 spoIIGA; sporulation factor SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D CLJ_B2122 cloSI; clostripain K08587 cloSI; clostripain [EC:3.4.22.8]
D CLJ_B3575 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CLJ_B0581 putative peptidoglycan hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_B0096 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_B2044 nlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_0090 cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_0235 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_B3036 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_B3131 purF_1; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLJ_B3166 purF_2; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CLJ_B3716 glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CLJ_B2941 conserved domain protein K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D CLJ_B1072 DJ-1/PfpI family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CLJ_B2997 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CLJ_B2340 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CLJ_B0387 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLJ_B0394 putative accessory gene regulator protein B K07813 agrB; accessory gene regulator B
D CLJ_B2420 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLJ_B2609 putative membrane-associated protease K07052 K07052; CAAX protease family protein
D CLJ_B0659 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLJ_B0567 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLJ_B1355 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLJ_B1112 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLJ_B3499 CAAX amino terminal protease family protein K07052 K07052; CAAX protease family protein
D CLJ_B1548 npr_5; thermolysin metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D CLJ_B1544 npr_1; thermolysin metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D CLJ_B1545 npr_2; thermolysin metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D CLJ_B1547 npr_4; thermolysin metallopeptidase K01400 nprE; bacillolysin [EC:3.4.24.28]
D CLJ_B1730 colG; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D CLJ_B1489 zinc carboxypeptidase family protein K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D CLJ_B1034 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B1080 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B0688 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B3592 peptidase family protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D CLJ_B1261 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLJ_B3626 putative dipeptidase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CLJ_B0509 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D CLJ_B2443 pepD_2; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLJ_B3122 pepD_3; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLJ_B1502 pepD_1; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CLJ_B3767 map_1; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLJ_B3906 map_2; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CLJ_B0619 pepP; Xaa-pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CLJ_B2477 metallopeptidase, family M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CLJ_0004 boNT_BvA4; botulinum neurotoxin type BvA4, BoNT/BvA4 K06011 boNT; botulinum neurotoxin [EC:3.4.24.69]
D CLJ_0133 boNT_BvB; botulinum neurotoxin type BvB, BoNT/BvB K06011 boNT; botulinum neurotoxin [EC:3.4.24.69]
D CLJ_B3023 aminopeptidase K19689 ampS; aminopeptidase [EC:3.4.11.-]
D CLJ_B3743 iadA; isoaspartyl dipeptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-]
D CLJ_B3848 ftsH_2; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJ_B3625 ftsH_1; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJ_B0458 ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJ_0192 ftsH_3; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJ_B0261 glutamyl aminopeptidase family protein K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D CLJ_B3251 putative metalloprotease K06402 spoIVFB; stage IV sporulation protein FB [EC:3.4.24.-]
D CLJ_B2650 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CLJ_B3871 peptidase, S1B family K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJ_B3920 subtilase family protein K17734 aprX; serine protease AprX [EC:3.4.21.-]
D CLJ_B2032 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJ_B2026 putative D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJ_B1521 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJ_B3504 clpP_1; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLJ_B0685 clpP; Clp protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLJ_B1907 serine protease K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CLJ_B3501 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLJ_B3960 ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CLJ_B3502 lonB; ATP-dependent protease LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D CLJ_B1973 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLJ_B0662 lepB_1; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLJ_B2668 lepB_2; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CLJ_B2247 prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D CLJ_B3692 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CLJ_B0157 cphB; cyanophycinase K13282 cphB; cyanophycinase [EC:3.4.15.6]
D CLJ_B0456 putative membrane associated peptidase K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D CLJ_B2059 spoIVB; SpoIVB peptidase K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D CLJ_B0082 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLJ_B1397 caudovirus prohead protease K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D CLJ_B3389 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D CLJ_B2785 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cbi01003]
D CLJ_B0165 conserved hypothetical protein K03429 ugtP; processive 1,2-diacylglycerol beta-glucosyltransferase [EC:2.4.1.315]
D CLJ_B3348 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLJ_0270 penicillin-binding protein 1A K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CLJ_B3358 teichoic acid biosynthesis protein A K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D CLJ_B2934 putative capsular polysaccharide synthesis protein K00712 tagE; poly(glycerol-phosphate) alpha-glucosyltransferase [EC:2.4.1.52]
D CLJ_B0186 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D CLJ_B3617 glycosyl transferase, group 36 family protein K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cbi01005]
D CLJ_B0352 glycosyl transferase, group 2 family K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D CLJ_B0186 tagO; undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cbi01011]
D CLJ_B0198 murA_1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJ_B3896 murA_2; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CLJ_B3681 murB; UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CLJ_B3878 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CLJ_B3840 murD; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CLJ_B1559 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CLJ_B0526 ddlB; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CLJ_B3701 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJ_B1854 alr_1; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CLJ_B3893 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CLJ_B0082 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D CLJ_B1561 mraY_2; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLJ_B0927 mraY_1; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CLJ_B2988 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CLJ_B0473 uppP_2; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJ_B0374 uppP_1; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJ_B0406 PAP2 family protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CLJ_B3361 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CLJ_B3348 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CLJ_0270 penicillin-binding protein 1A K18770 pbpD; penicillin-binding protein 4 [EC:2.4.99.28 3.4.16.4]
D CLJ_B3257 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CLJ_B1558 stage V sporulation protein D K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D CLJ_B3686 penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D CLJ_B2032 dacF; serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJ_B2026 putative D-alanyl-D-alanine carboxypeptidase DacB K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJ_B1521 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D CLJ_B1034 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B1080 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B0688 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B0581 putative peptidoglycan hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_B0096 NlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_B2044 nlpC/P60 family protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_0090 cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_0235 putative cell wall-associated hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_B3036 conserved hypothetical protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D CLJ_B2340 sortase family protein K07284 srtA; sortase A [EC:3.4.22.70]
D CLJ_B3271 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLJ_B2787 conserved hypothetical protein TIGR00247 K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CLJ_B0252 sleB; spore-cortex-lytic enzyme K27245 sleB; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CLJ_B0199 spoIID; stage II sporulation protein D K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D CLJ_B1535 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B2508 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3376 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3751 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B1929 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3377 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B1846 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B2050 peptidoglycan-binding domain 1 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cbi01004]
D CLJ_B3930 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CLJ_B0783 putative 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLJ_B3933 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CLJ_B3928 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CLJ_B0579 oxidoreductase, short chain dehydrogenase/reductase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJ_B3929 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CLJ_B3926 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CLJ_B3931 putative enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D CLJ_B3153 lipase/acylhydrolase, GDSL family K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D CLJ_B2814 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLJ_B3573 AMP-binding protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D CLJ_B2681 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CLJ_B2363 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CLJ_B0484 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CLJ_B0256 plsD; glycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cbi01006]
D CLJ_B2070 putative geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CLJ_B2655 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJ_B1442 putative undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CLJ_B1976 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
C 01007 Amino acid related enzymes [BR:cbi01007]
D CLJ_B1143 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJ_B3605 tyrS_2; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJ_B1244 tyrS_1; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJ_B3613 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLJ_B3813 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLJ_B1122 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLJ_B0113 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLJ_B0137 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLJ_B3435 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLJ_B0232 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLJ_B3842 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLJ_B3319 aspS_2; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLJ_B0683 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLJ_B1064 aspS_1; aspartate--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D CLJ_B3320 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLJ_B3841 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLJ_B0587 serS_2; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLJ_B0021 serS_1; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLJ_B3815 putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLJ_B3627 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLJ_B3405 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLJ_B2794 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLJ_B3397 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLJ_B3396 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLJ_B2623 aspB; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1982 aspB_1; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B1059 pyridoxal-phosphate-dependent aminotransferase family K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D CLJ_B3426 aminotransferase, classes I and II K10907 K10907; aminotransferase [EC:2.6.1.-]
D CLJ_B1678 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CLJ_B1515 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJ_B2169 aminotransferase, classes I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CLJ_B0953 ilvE; branched-chain-amino-acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJ_B2983 aminotransferase, class IV K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CLJ_B0876 putative pleiotropic regulatory protein DegT K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450 [BR:cbi00199]
D CLJ_B1087 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:cbi00194]
D CLJ_B0196 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CLJ_B0195 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CLJ_B0194 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CLJ_B0193 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CLJ_B0192 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CLJ_B0191 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CLJ_B0190 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CLJ_B0189 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLJ_B0188 atpI; ATP synthase F0, I subunit K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cbi03000]
D CLJ_B3905 transcriptional regulator, AraC family K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator
D CLJ_B0828 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CLJ_B1464 AraC-family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D CLJ_B2371 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D CLJ_0013 AraC-family transcriptional regulator K13653 K13653; AraC family transcriptional regulator
D CLJ_0014 transcriptional activator, AraC family K13653 K13653; AraC family transcriptional regulator
D CLJ_B0930 bacterial transcription activator, effector binding protein K13653 K13653; AraC family transcriptional regulator
D CLJ_B1685 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D CLJ_B1317 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CLJ_B2418 transcriptional regulator, DeoR family K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor
D CLJ_B0201 spoIIID_1; stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLJ_0144 spoIIID_2; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLJ_0224 stage III sporulation protein D K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D CLJ_B1726 transcriptional regulator, DeoR family K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator
D CLJ_B3199 CBS domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator
D CLJ_B0138 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D CLJ_B2194 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D CLJ_B3062 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D CLJ_B1618 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLJ_B1140 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D CLJ_B0918 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D CLJ_B3017 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D CLJ_B0602 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D CLJ_B2386 HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLJ_B0112 transcriptional regulator, MarR family K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D CLJ_B2790 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJ_B0454 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJ_B1487 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJ_B3057 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJ_B3070 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CLJ_B3492 transcriptional regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CLJ_B1006 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJ_B1453 transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D CLJ_B0728 transcriptional regulator, Crp/Fnr family K21562 flp; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D CLJ_B1071 cyclic nucleotide-binding domain protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D CLJ_B1653 cyclic nucleotide-binding domain protein K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator
D CLJ_B1445 putative transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D CLJ_B1219 rrf2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CLJ_B2799 rrF2 family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D CLJ_B0810 putative arsenical resistance operon repressor ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CLJ_B0549 putative cadmium resistance transcriptional regulator CadC K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D CLJ_B0706 cupin domain protein K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization
D CLJ_B0135 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CLJ_B0648 PadR-family transcriptional regulator K10947 K10947; PadR family transcriptional regulator
D CLJ_B2611 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator
D CLJ_B0368 putative iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CLJ_B1640 putative iron-dependent repressor K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D CLJ_B1166 birA; biotin operon repressor/biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CLJ_B0801 putative DNA-binding protein K22299 rghR; HTH-type transcriptional regulator, competence development regulator
D CLJ_B3877 purR; pur operon repressor K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D CLJ_B0681 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJ_B1737 acoR; aco operon transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJ_B1755 signal-transduction and transcriptional-control protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJ_B2141 aorR; aor transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJ_B1751 sensory box sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJ_B2164 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJ_B2214 putative sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJ_B3468 sigma-54 dependent transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D CLJ_B3587 rex; redox-sensing transcriptional repressor Rex K01926 rex; redox-sensing transcriptional repressor
D CLJ_B2661 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor
D CLJ_B0543 conserved hypothetical protein K07727 K07727; putative transcriptional regulator
D CLJ_B2343 conserved hypothetical protein K07727 K07727; putative transcriptional regulator
D CLJ_B2601 putative DNA-binding protein K07729 K07729; putative transcriptional regulator
D CLJ_B0515 conserved domain protein K07729 K07729; putative transcriptional regulator
D CLJ_B1362 conserved domain protein K07729 K07729; putative transcriptional regulator
D CLJ_B2499 putative DNA-binding protein K07729 K07729; putative transcriptional regulator
D CLJ_B1767 conserved domain protein K07729 K07729; putative transcriptional regulator
D CLJ_B3306 putative DNA-binding protein K07729 K07729; putative transcriptional regulator
D CLJ_B3307 DNA-binding protein K07729 K07729; putative transcriptional regulator
D CLJ_B3700 toxin-antitoxin system, antitoxin component K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CLJ_B0725 licT; transcriptional antiterminator, LicT K03488 licT; beta-glucoside operon transcriptional antiterminator
D CLJ_B2982 transcriptional antiterminator, BglG family K03480 glcT; transcriptional antiterminator
D CLJ_B3063 transcriptional antiterminator, BglG family K03480 glcT; transcriptional antiterminator
D CLJ_B2309 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLJ_B1350 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLJ_B2828 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CLJ_B0097 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D CLJ_B3867 stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D CLJ_B3977 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJ_B3979 parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJ_B2998 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator
D CLJ_B2065 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism
D CLJ_B3218 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CLJ_B3824 ctsR; transciptional repressor CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response
D CLJ_0066 conserved domain protein K03973 pspC; phage shock protein C
D CLJ_B0273 transcriptional regulator, SorC family K05311 cggR; central glycolytic genes regulator
D CLJ_B1580 pyrR_1; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLJ_B3048 pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D CLJ_B2760 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D CLJ_B1555 mraZ; mraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cbi03021]
D CLJ_B0588 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CLJ_B3760 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLJ_B3797 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLJ_B3796 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLJ_B2743 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLJ_B3194 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CLJ_0244 putative sporulation sigma factor SigK K03086 rpoD; RNA polymerase primary sigma factor
D CLJ_0258 putative DNA-directed RNA polymerase specialized sigma subunit K03086 rpoD; RNA polymerase primary sigma factor
D CLJ_B0061 RNA polymerase sigma-70 factor family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLJ_B0878 RNA polymerase sigma-70 factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLJ_B3632 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D CLJ_B3352 sigF; RNA polymerase sigma-F factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJ_B2762 sigG; RNA polymerase sigma-G factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJ_B2763 sigE; RNA polymerase sigma-E factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJ_B2771 sigK; RNA polymerase sigma-K factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJ_0208 putative sigma K K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJ_B2561 hypothetical protein K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJ_0209 putative RNA polymerase sigma factor K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D CLJ_B3808 sigH; RNA polymerase sigma-H factor K27000 sigH; RNA polymerase sigma-H factor
D CLJ_B0272 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CLJ_B2873 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D CLJ_B2646 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D CLJ_B2073 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CLJ_B3802 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLJ_B3318 sigma-E factor regulator, RseC/MucC family K03803 rseC; sigma-E factor negative regulatory protein RseC
D CLJ_B3843 greA_2; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLJ_B0744 greA_1; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CLJ_B0172 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cbi03019]
D CLJ_B3248 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLJ_B2679 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLJ_B2789 RNA-metabolizing metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLJ_B1341 RNA-metabolising metallo-beta-lactamase K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CLJ_B2628 HDIG/HD/KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CLJ_B0280 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLJ_B3478 HDIG domain protein K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CLJ_0257 CMP-binding-factor 1 K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D CLJ_B0713 rhlE; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D CLJ_B3029 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B1960 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B1958 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B2215 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B1040 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLJ_B0278 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJ_B2637 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CLJ_B0172 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CLJ_B3676 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D CLJ_B3216 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLJ_B3579 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJ_B1975 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CLJ_B2964 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CLJ_B3680 conserved hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cbi03011]
D CLJ_0210 ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLJ_B1201 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLJ_B1985 putative 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CLJ_B2660 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CLJ_B3783 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CLJ_B3761 rpsD_2; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLJ_B3710 rpsD_1; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CLJ_B3772 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CLJ_B3967 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CLJ_B3793 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CLJ_B3775 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CLJ_B3753 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CLJ_B3790 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CLJ_B3762 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CLJ_B3794 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CLJ_B3763 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D CLJ_B3776 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CLJ_B2638 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CLJ_B2673 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CLJ_B3780 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CLJ_B3965 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CLJ_B3785 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CLJ_B3224 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CLJ_B3210 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CLJ_B3800 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CLJ_B3786 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CLJ_B3789 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CLJ_B3788 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CLJ_B3777 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CLJ_B3774 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CLJ_B3961 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CLJ_B3799 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CLJ_B3801 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CLJ_B3798 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CLJ_B3754 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CLJ_B3779 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CLJ_B3770 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CLJ_B3782 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CLJ_B3759 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CLJ_B3773 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CLJ_B2669 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CLJ_B3401 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CLJ_B3246 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CLJ_B3784 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CLJ_B3787 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CLJ_B3778 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CLJ_B3244 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CLJ_B2728 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CLJ_B3781 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CLJ_B3771 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D CLJ_B0173 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CLJ_B2682 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CLJ_B3804 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CLJ_B3987 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CLJ_B3402 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CLJ_B3764 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CLJ_B3490 rplY_2; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLJ_B3382 rplY_1; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CLJ_B3795 ribosomal protein L7Ae family protein K07590 RP-L7A; large subunit ribosomal protein L7A
D CLJ_B0011 rrf_1; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B3829 rrf_8; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0052 rrf_2; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0059 rrf_3; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0073 rrf_5; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0079 rrf_6; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0066 rrf_4; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B3836 rrf_9; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0481 rrf_7; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0008 rrs_1; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0056 rrs_3; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0063 rrs_4; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B3833 rrs_8; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B3839 rrs_9; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0070 rrs_5; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0475 rrs_7; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0049 rrs_2; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0076 rrs_6; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0051 rrl_2; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0010 rrl_1; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B3830 rrl_8; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0072 rrl_5; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B3837 rrl_9; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0065 rrl_4; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0078 rrl_6; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0480 rrl_7; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0058 rrl_3; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cbi03009]
D CLJ_B2679 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLJ_B3202 era; GTP-binding protein Era K03595 era; GTPase
D CLJ_B3243 GTPase, Obg family K03979 obgE; GTPase [EC:3.6.5.-]
D CLJ_B2646 nusA; N utilization substance protein A K02600 nusA; transcription termination/antitermination protein NusA
D CLJ_B2073 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D CLJ_B3802 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D CLJ_B3554 RNA pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D CLJ_B0118 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CLJ_B2737 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D CLJ_B2724 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D CLJ_B3213 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CLJ_B3980 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLJ_B1556 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CLJ_B0095 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CLJ_B2067 putative hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CLJ_B3810 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CLJ_B3900 conserved hypothetical protein TIGR00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CLJ_B2736 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CLJ_B3097 florfenicol/chloramphenicol resistance protein K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224]
D CLJ_B3672 rumA_2; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D CLJ_B1991 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CLJ_B1536 pseudouridine synthase, RluA family K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D CLJ_B1578 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLJ_B3237 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CLJ_B3604 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CLJ_B0048 acetyltransferase, GNAT family K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D CLJ_B2671 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CLJ_B2631 RNA modification enzyme, MiaB family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CLJ_B3214 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CLJ_B3248 ribonuclease, Rne/Rng family K08301 rng; ribonuclease G [EC:3.1.26.-]
D CLJ_B2792 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CLJ_B3812 RNase3 domain protein K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D CLJ_B3029 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B1960 dbpA; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B1958 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B2215 ATP-dependent RNA helicase, DEAD/DEAH box family K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D CLJ_B2733 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D CLJ_B2750 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D CLJ_B2667 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A
D CLJ_B3345 GTP-binding protein K03665 hflX; GTPase
D CLJ_B0180 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLJ_B3324 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CLJ_B2642 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CLJ_B2647 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CLJ_B0003 S4 domain protein K14761 rlbA; ribosome-associated protein
D CLJ_B3205 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D CLJ_B3242 CRS1/YhbY domain protein K07574 yhbY; RNA-binding protein
D CLJ_B0216 yfiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D CLJ_B1554 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D CLJ_B2683 ribosomal protein L32 family protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cbi03016]
D CLJ_B1490 rnz; ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D CLJ_B2606 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CLJ_B1143 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJ_B3815 putative prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLJ_B3627 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CLJ_B0137 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CLJ_B0232 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLJ_B0113 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CLJ_B1122 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLJ_B3842 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CLJ_B3319 aspS_2; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLJ_B2794 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CLJ_B0683 asnS; asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D CLJ_B3841 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLJ_B3405 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CLJ_B0587 serS_2; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLJ_B0021 serS_1; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CLJ_B3813 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CLJ_B3435 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CLJ_B3320 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CLJ_B3397 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CLJ_B3396 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CLJ_B3605 tyrS_2; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJ_B1244 tyrS_1; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJ_B3613 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CLJ_B3323 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D CLJ_B3211 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLJ_B1427 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLJ_B0576 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CLJ_B1862 conserved hypothetical protein K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D CLJ_B3755 truA_2; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CLJ_B2116 truA_1; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CLJ_B2640 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CLJ_B1223 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJ_B2798 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJ_B0180 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D CLJ_B1976 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CLJ_B3982 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CLJ_B3981 gidA_3; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLJ_B3986 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CLJ_B3189 bacterial RNase P class A K01978 rnpB; M1 RNA
D CLJ_B3053 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D CLJ_B1064 aspS_1; aspartate--tRNA ligase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D CLJ_B1611 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D CLJ_B0033 cytidine/deoxycytidylate deaminase family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D CLJ_B3845 dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CLJ_B1979 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CLJ_B3212 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D CLJ_B2670 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CLJ_B3192 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D CLJ_B0265 conserved hypothetical protein K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CLJ_B0094 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CLJ_B3398 RNA methyltransferase, TrmH family K03437 spoU; RNA methyltransferase, TrmH family
D CLJ_B1226 trmU_1; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLJ_B3159 trmU_2; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CLJ_B0204 conserved hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CLJ_B3334 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CLJ_B1667 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CLJ_B1664 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLJ_B0869 putative 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CLJ_B1665 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CLJ_B0255 iron-sulfur cluster-binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLJ_B3654 4Fe-4S ferredoxin, iron-sulfur binding domain protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D CLJ_B3333 tgt; tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CLJ_B3850 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CLJ_B3603 glycoprotease family protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CLJ_B3594 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CLJ_B3602 conserved hypothetical protein TIGR00150 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CLJ_B0046 thiF domain protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CLJ_B2720 conserved hypothetical protein K27343 tmcAL; tRNA(Met) cytidine acetate ligase [EC:6.3.4.-]
D CLJ_B0280 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CLJ_B2637 pnpA; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cbi03012]
D CLJ_B2643 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLJ_B3403 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLJ_B3588 putative drug resistance ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D CLJ_B2659 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CLJ_B3791 tuf_1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLJ_B3805 tuf_2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLJ_B3792 fusA_1; translation elongation factor G K02355 fusA; elongation factor G
D CLJ_B3826 fusA_2; translation elongation factor G K02355 fusA; elongation factor G
D CLJ_B3232 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D CLJ_B0177 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CLJ_B2656 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CLJ_B0176 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CLJ_B3870 pth; aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CLJ_B3765 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CLJ_B2084 efp; translation elongation factor P K02356 efp; elongation factor P
D CLJ_B0219 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D CLJ_B3611 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:cbi03110]
D CLJ_B0468 clpB; clpB protein K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CLJ_B3821 putative negative regulator of genetic competence MecB/ClpC K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CLJ_0018 chaperone ClpB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D CLJ_B3503 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CLJ_B2190 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
D CLJ_B3216 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLJ_B3579 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJ_B3215 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLJ_B0236 molecular chaperone, DnaJ family K03686 dnaJ; molecular chaperone DnaJ
D CLJ_B3415 hsp33; 33 kDa chaperonin K04083 hslO; molecular chaperone Hsp33
D CLJ_B3217 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CLJ_B1940 heat shock protein K13993 HSP20; HSP20 family protein
D CLJ_B0873 heat shock protein K13993 HSP20; HSP20 family protein
D CLJ_B3580 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D CLJ_B3871 peptidase, S1B family K04771 degP; serine protease Do [EC:3.4.21.107]
D CLJ_B3848 ftsH_2; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJ_B3625 ftsH_1; ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJ_B0458 ATP-dependent metalloprotease K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJ_0192 ftsH_3; ATP-dependent metallopeptidase HflB K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CLJ_B0189 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CLJ_B0502 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CLJ_B0500 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CLJ_B3892 putative peptidyl-prolyl cis-trans isomerase, cyclophilin-type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CLJ_B3868 putative peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D CLJ_B0075 peptidil-prolyl isomerase family protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CLJ_B1998 thioredoxin family protein K03671 TXN; thioredoxin
D CLJ_B3742 trx; thioredoxin K03671 TXN; thioredoxin
D CLJ_B1303 thioredoxin family protein K03671 TXN; thioredoxin
D CLJ_B1295 glutaredoxin-like protein, YruB-family K03676 grxC; glutaredoxin 3
C 04131 Membrane trafficking [BR:cbi04131]
D CLJ_B0274 gap_1; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLJ_B3675 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLJ_B2190 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:cbi04121]
C 03051 Proteasome [BR:cbi03051]
D CLJ_B2190 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cbi03032]
D CLJ_B0460 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CLJ_B3864 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLJ_B0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLJ_B3959 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLJ_0204 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CLJ_B3938 dnaC family protein K02315 dnaC; DNA replication protein DnaC
D CLJ_B3304 putative ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D CLJ_B2563 hypothetical phage-related protein K02315 dnaC; DNA replication protein DnaC
D CLJ_B1879 phage protein K02315 dnaC; DNA replication protein DnaC
D CLJ_B1371 phage protein K02315 dnaC; DNA replication protein DnaC
D CLJ_0205 conserved hypothetical protein K02315 dnaC; DNA replication protein DnaC
D CLJ_B3195 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLJ_0120 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CLJ_0038 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_0088 ssb_2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B3966 ssb_1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B0451 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B3677 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJ_B2648 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJ_0039 dnaN_2; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B0002 dnaN_1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B3225 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_0099 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_B0090 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJ_B0305 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJ_B0036 dnaX_1; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_0096 dnaX_2; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_B2666 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CLJ_B3273 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJ_B3551 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLJ_B0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLJ_B0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLJ_B2999 DNA topoisomerase, GyrA/ParC subunit family K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLJ_B3000 DNA topoisomerase, GyrB/ParE subunit family K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLJ_B2662 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLJ_0252 type I topoisomease K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLJ_B1608 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D CLJ_B1337 topB; DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cbi03036]
D CLJ_B2679 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CLJ_B3864 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLJ_B0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CLJ_B1975 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D CLJ_B2386 HTH-type transcriptional regulator LrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D CLJ_B2677 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D CLJ_B2030 scpA; segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D CLJ_B2029 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D CLJ_B2766 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLJ_B3860 putative cell division protein FtsL K13052 divIC; cell division protein DivIC
D CLJ_B3694 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLJ_0272 methionine import ATP-binding protein MetN K09812 ftsE; cell division transport system ATP-binding protein
D CLJ_B2632 putative stage III sporulation protein E K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CLJ_B1557 putative cell division protein FtsL K03586 ftsL; cell division protein FtsL
D CLJ_B1563 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D CLJ_B1562 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D CLJ_B3693 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein
D CLJ_0271 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D CLJ_B2765 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLJ_B3395 conserved hypothetical protein K09888 zapA; cell division protein ZapA
D CLJ_B1535 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B2508 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3376 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3751 cwlD; N-acetylmuramoyl-L-alanine amidase CwlD K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B1929 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3377 putative N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B1846 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B2050 peptidoglycan-binding domain 1 K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B3256 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLJ_B3255 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLJ_B3254 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CLJ_B1571 putative septum site-determining protein divIVA K04074 divIVA; cell division initiation protein
D CLJ_B1568 conserved hypothetical protein K09772 sepF; cell division inhibitor SepF
D CLJ_B3260 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJ_B0202 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJ_B3259 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CLJ_B3258 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D CLJ_B3253 rodA_2; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CLJ_B0697 rodA_1; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D CLJ_B3978 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CLJ_B3977 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJ_B3979 parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJ_B2999 DNA topoisomerase, GyrA/ParC subunit family K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLJ_B3000 DNA topoisomerase, GyrB/ParE subunit family K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLJ_B3981 gidA_3; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CLJ_B3980 gidB; 16S rRNA methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CLJ_B2038 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLJ_B2549 phage integrase K04763 xerD; integrase/recombinase XerD
D CLJ_B2057 DNA integration/recombination protein K04763 xerD; integrase/recombinase XerD
D CLJ_B2109 site-specific recombinase K04763 xerD; integrase/recombinase XerD
D CLJ_B1971 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CLJ_A0006 integrase/recombinase XerD K04763 xerD; integrase/recombinase XerD
D CLJ_B3865 MazG family protein K02499 yabN; tetrapyrrole methylase family protein / MazG family protein
D CLJ_B0125 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CLJ_0087 filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CLJ_B3500 GTP-binding protein K03978 engB; GTP-binding protein
D CLJ_B3678 conserved hypothetical protein K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cbi03400]
D CLJ_B1633 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CLJ_B1308 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D CLJ_B3584 putative 8-oxoguanine DNA glycosylase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D CLJ_B0257 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CLJ_B0588 putative ATP-dependent helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D CLJ_B0723 putative mutator mutT protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D CLJ_B1276 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D CLJ_B0054 uracil-DNA glycosylase family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLJ_B0111 udgA; uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CLJ_B1583 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CLJ_B2992 AP endonuclease, family 2 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D CLJ_B2991 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CLJ_B3551 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CLJ_B3273 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D CLJ_B3689 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CLJ_B3690 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CLJ_B3683 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CLJ_B3476 GIY-YIG domain protein K03703 uvrC; excinuclease ABC subunit C
D CLJ_B3552 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_0310 putative DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B3624 conserved hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B1434 helicase, UvrD/REP/exonuclease family protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B1531 helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B3158 putative helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CLJ_B3797 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CLJ_B3796 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CLJ_B3760 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CLJ_B2743 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CLJ_B3869 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CLJ_B1978 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D CLJ_B3388 MutS2 family protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLJ_B0710 MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D CLJ_B1977 DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D CLJ_B2072 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CLJ_B2071 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CLJ_B3677 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CLJ_B2648 polC; DNA polymerase III, alpha subunit, Gram-positive type K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D CLJ_0039 dnaN_2; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B0002 dnaN_1; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CLJ_B3225 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_0099 DNA polymerase III, delta subunit superfamily K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CLJ_B0090 putative DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CLJ_B0305 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CLJ_B0036 dnaX_1; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_0096 dnaX_2; DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CLJ_0038 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_0088 ssb_2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B3966 ssb_1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B0451 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B0213 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D CLJ_B2629 recA; recA protein K03553 recA; recombination protein RecA
D CLJ_B3336 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CLJ_B3335 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CLJ_B2741 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CLJ_B0546 sbcC; exonuclease SbcCD, C subunit K03546 sbcC; DNA repair protein SbcC/Rad50
D CLJ_B0545 sbcD; exonuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D CLJ_B3820 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CLJ_B0004 recF; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D CLJ_B2725 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CLJ_B0038 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CLJ_B2064 recN; DNA repair protein recN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CLJ_B0507 addA; ATP-dependent nuclease subunit A K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D CLJ_B0495 addB; ATP-dependent nuclease subunit B K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D CLJ_B0007 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CLJ_B0006 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CLJ_B2662 topA; DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CLJ_B3864 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CLJ_B2568 RecT K07455 recT; recombination protein RecT
D CLJ_B2780 recombinase, phage RecT family K07455 recT; recombination protein RecT
D CLJ_B1040 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D CLJ_B3045 dinB; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D CLJ_B1973 lexA; LexA repressor K01356 lexA; repressor LexA [EC:3.4.21.88]
D CLJ_B3446 recX; regulatory protein RecX K03565 recX; regulatory protein
D CLJ_B3042 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CLJ_B3041 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CLJ_B2641 DHH family protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cbi03029]
D CLJ_B2643 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CLJ_B3403 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CLJ_B2659 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CLJ_B3791 tuf_1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLJ_B3805 tuf_2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLJ_B3792 fusA_1; translation elongation factor G K02355 fusA; elongation factor G
D CLJ_B3826 fusA_2; translation elongation factor G K02355 fusA; elongation factor G
D CLJ_B1482 helicase domain protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D CLJ_B3202 era; GTP-binding protein Era K03595 era; GTPase
D CLJ_B3605 tyrS_2; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJ_B1244 tyrS_1; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CLJ_B0232 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CLJ_B3319 aspS_2; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CLJ_B3841 glyS; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D CLJ_B1122 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CLJ_B3547 gatA; glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CLJ_B3546 gatB; glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CLJ_B3548 gatC; glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CLJ_0038 ssDNA-binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_0088 ssb_2; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B3966 ssb_1; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B0451 single-strand binding domain protein K03111 ssb; single-strand DNA-binding protein
D CLJ_B3216 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLJ_B3217 grpE; co-chaperone GrpE K03687 GRPE; molecular chaperone GrpE
D CLJ_B3579 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJ_B3580 groES; chaperonin, 10 kDa K04078 groES; chaperonin GroES
D CLJ_B3215 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CLJ_B0236 molecular chaperone, DnaJ family K03686 dnaJ; molecular chaperone DnaJ
D CLJ_B1223 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJ_B2798 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJ_B0125 conserved hypothetical protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CLJ_B3984 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CLJ_B2190 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cbi02000]
D CLJ_B1643 ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLJ_B1708 ABC transporter ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLJ_B2588 putative ABC transporter, ATP-binding/permease protein K14698 irtA; ATP-binding cassette, subfamily B, bacterial IrtA/YbtP [EC:7.-.-.-]
D CLJ_B1644 putative multidrug export ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLJ_B1709 ABC transporter ATP-binding/permease protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLJ_B2587 ABC transporter, ATP-binding protein K14699 irtB; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
D CLJ_B2234 putative lantibiotic ABC transporter,ATP-binding protein K20485 nisT; ATP-binding cassette, subfamily B, bacterial NisT/SpaT
D CLJ_B2159 ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJ_B2135 putative ABC transporter, ATP-binding/permease protein K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJ_B2158 putative ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJ_B2134 ABC transporter, ATP-binding/permease protein K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D CLJ_B0367 ABC transporter, ATP-binding/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLJ_B1354 ABC transporter, ATP-binding protein/permease protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLJ_B1101 lipid A export ATP-binding/permease protein MsbA K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D CLJ_B0634 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CLJ_B3098 drug resistance ABC transporter, RA2 family, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CLJ_B1114 drug resistance ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CLJ_B1586 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CLJ_B1587 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CLJ_B1588 putative molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CLJ_B2150 tupA; tungstate ABC transporter, tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D CLJ_B2149 putative tungstate ABC transporter, permease protein TupB K05773 tupB; tungstate transport system permease protein
D CLJ_B2148 putative tungstate ABC transporter, ATP-binding protein TupC K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CLJ_B1195 ABC transporter, substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CLJ_B1196 ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CLJ_B1197 ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CLJ_B0647 potCD; spermidine/putrescine transport system permease protein PotC/spermidine/putrescine-binding periplasmic protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein
D CLJ_B0646 potB; spermidine/putrescine ABC transporter, permease protein PotB K11071 potB; spermidine/putrescine transport system permease protein
D CLJ_B0645 potA; spermidine/putrescine ABC transporter, ATP-binding protein K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D CLJ_B1155 putative ABC transporter, solute-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CLJ_B1157 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CLJ_B1156 putative polyamine transport system, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CLJ_B1158 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CLJ_B1746 glycine betaine/L-proline ABC transporter, permease/glycine betaine/L-proline-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D CLJ_B1745 glycine betaine/L-proline ABC transporter, ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D CLJ_B1484 putative lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLJ_B3438 periplasmic binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D CLJ_B1485 putative ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLJ_B3443 ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D CLJ_B1486 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLJ_B3442 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D CLJ_B1613 carbohydrate uptake ABC transporter, CUT1 family, ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D CLJ_B1315 D-ribose-binding protein K10439 rbsB; ribose transport system substrate-binding protein
D CLJ_B1313 ribose transport system permease protein RbsC K10440 rbsC; ribose transport system permease protein
D CLJ_B1312 ribose import ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D CLJ_B0267 lipoprotein, bmp family K07335 bmpA; basic membrane protein A and related proteins
D CLJ_B0269 sugar ABC transporter, permease protein K23535 nupB; general nucleoside transport system permease protein
D CLJ_B0270 sugar ABC transporter, permease protein K23536 nupC; general nucleoside transport system permease protein
D CLJ_B0268 sugar ABC transporter, ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D CLJ_B0145 putative arabinose-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLJ_B1616 carbohydrate uptake ABC transporter, CUT1 family, carbohydrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D CLJ_B1614 carbohydrate uptake ABC transporter, CUT1 family, permease protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D CLJ_B1615 carbohydrate uptake ABC transporter, CUT1 family, permease protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D CLJ_B0442 phosphate uptake ABC transporter, PhoT family, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLJ_B2756 pstS; phosphate ABC transporter, phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D CLJ_B2755 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D CLJ_B0444 pstA_1; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLJ_B2754 pstA_2; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D CLJ_B2753 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLJ_B0445 phosphate import ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CLJ_B2220 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CLJ_B0527 putative high-affinity branched-chain amino acid ABC transporter, amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CLJ_B0528 high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CLJ_B0529 putative high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CLJ_B0530 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CLJ_B0531 putative high-affinity branched chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CLJ_B1135 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLJ_B1136 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLJ_B1603 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CLJ_B1134 methionine ABC transporter, MUT family, permease protein K02072 metI; D-methionine transport system permease protein
D CLJ_B1602 methionine ABC transporter, MUT family, permease protein K02072 metI; D-methionine transport system permease protein
D CLJ_B1133 methionine ABC transporter, MUT family, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CLJ_B1601 methionine ABC transporter, MUT family, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CLJ_B1204 putative ABC transporter, substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CLJ_B0741 putative ABC transporter, substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D CLJ_B1205 ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CLJ_B0739 ABC transporter, permease protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D CLJ_B1206 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CLJ_B0740 ABC transporter, ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D CLJ_B1222 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K16961 yxeM; putative S-methylcysteine transport system substrate-binding protein
D CLJ_B1221 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K16962 yxeN; putative S-methylcysteine transport system permease protein
D CLJ_B1517 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K16963 yxeO; putative S-methylcysteine transport system ATP-binding protein
D CLJ_B0518 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CLJ_B1528 polar amino acid uptake ABC transporter, PAAT family, amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CLJ_B0517 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein
D CLJ_B1529 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein
D CLJ_B0488 polar amino acid uptake family ABC transporter, PAAT family, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CLJ_B3422 oligopeptide/dipeptide ABC transporter, oligopeptide/dipeptide-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJ_B3545 bacterial extracellular solute-binding protein, family 5 K15580 oppA; oligopeptide transport system substrate-binding protein
D CLJ_B3421 oligopeptide/dipeptide ABC transporter, permease protein K15581 oppB; oligopeptide transport system permease protein
D CLJ_B3420 oligopeptide/dipeptide ABC transporter, permease protein K15582 oppC; oligopeptide transport system permease protein
D CLJ_B3419 oligopeptide/dipeptide ABC transporter, ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein
D CLJ_B3418 oligopeptide/dipeptide ABC transporter, ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein
D CLJ_B1268 putative oligopeptide ABC transporter, oligopeptide-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJ_B1864 peptide/opine/nickel uptake ABC transporter, PepT family, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJ_B0856 methyl-accepting chemotaxis protein/bacterial extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJ_B1473 peptide/opine/nickel uptake ABC transporter, PepT family, substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D CLJ_B1267 putative oligopeptide ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJ_B1865 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJ_B1474 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D CLJ_B1266 putative oligopeptide ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJ_B1866 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJ_B1475 peptide/opine/nickel uptake ABC transporter, PepT family, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D CLJ_B1867 peptide/opine/nickel uptake ABC transporter, PepT family, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D CLJ_B0363 iron compound ABC transporter, iron compound-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D CLJ_B0361 iron compound ABC transporter, iron compound-binding protein K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D CLJ_B0364 iron compound ABC transporter, permease protein K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D CLJ_B0759 fhuB; ferrichrome transport system permease protein FhuB K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D CLJ_B0760 fhuG; ferrichrome transport system permease protein FhuG K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D CLJ_B0365 iron compound ABC transporter, permease protein K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D CLJ_B0761 fhuC; ferrichrome transport ATP-binding protein FhuC K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D CLJ_B0366 iron compound ABC transporter, ATP-binding protein K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D CLJ_B0838 lipoprotein K25109 sirA; iron-siderophore transport system substrate-binding protein
D CLJ_B0839 ferrichrome transport system permease protein FhuB K25110 sirB; iron-siderophore transport system permease protein
D CLJ_B0840 ferrichrome transport system permease protein FhuG K25111 sirC; iron-siderophore transport system permease protein
D CLJ_B0841 ferric enterobactin transport ATP-binding protein FepC K25130 fecE; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CLJ_B1098 iron chelate uptake ABC transporter, FeCT family, solute-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein
D CLJ_B1096 iron chelate uptake ABC transporter, FeCT family, permease protein K25283 yclO; iron-siderophore transport system permease protein
D CLJ_B1095 iron chelate uptake ABC transporter, FeCT family, permease protein K25284 yclN; iron-siderophore transport system permease protein
D CLJ_B1097 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CLJ_B1019 putative iron chelate uptake ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJ_B0758 ABC transporter, iron chelate uptake transporter FeCT family, periplasmic-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJ_B3151 putative iron chelate uptake ABC transporter, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJ_B0356 iron chelate uptake ABC transporter, FeCT family, solute-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJ_B0757 ABC transporter, iron chelate uptake transporter FeCT family, periplasmic-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D CLJ_B1018 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLJ_B3149 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLJ_B0357 iron chelate uptake ABC transporter, FeCT family, permease protein K02015 ABC.FEV.P; iron complex transport system permease protein
D CLJ_B1017 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLJ_B3150 putative iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLJ_B0358 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D CLJ_B1455 iron chelate uptake ABC transporter, FeCT family, solute-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D CLJ_B1456 iron chelate uptake ABC transporter, FeCT family, permease protein K25027 btuC; cobalamin transport system permease protein
D CLJ_B1457 iron chelate uptake ABC transporter, FeCT family, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CLJ_B1480 periplasmic solute binding protein family K09815 znuA; zinc transport system substrate-binding protein
D CLJ_B1478 putative metal ion ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CLJ_B1479 putative metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CLJ_B0968 cbiN; cobalt transport protein K02009 cbiN; cobalt/nickel transport protein
D CLJ_B0969 cbiQ; cobalt ABC transporter, permease protein CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D CLJ_B0967 cbiM; cobalamin biosynthesis protein CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D CLJ_B0954 transmembrane protein BioY K03523 bioY; biotin transport system substrate-specific component
D CLJ_B2473 BioY family protein K03523 bioY; biotin transport system substrate-specific component
D CLJ_B2176 putative ABC transporter, permease protein K16785 ecfT; energy-coupling factor transport system permease protein
D CLJ_B3756 cobalt transport permease, CbiQ family K16785 ecfT; energy-coupling factor transport system permease protein
D CLJ_B3758 putative cobalt ABC transporter, ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJ_B3757 putative cobalt ABC transporter, ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJ_B2177 ABC transporter, ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D CLJ_B2178 putative ABC transporter K16925 ykoE; energy-coupling factor transport system permease protein
D CLJ_B3600 manganese/zinc/iron chelate uptake ABC transporter, Mzt family, substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D CLJ_B2449 putative sodium extrusion protein NatB K09696 natB; sodium transport system permease protein
D CLJ_B2450 putative sodium extrusion ATP-binding protein NatA K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D CLJ_B1690 putative lantibiotic ABC transporter, permease protein K20491 nisE; lantibiotic transport system permease protein
D CLJ_B1691 putative lantibiotic ABC transporter, permease protein K20492 nisG; lantibiotic transport system permease protein
D CLJ_B1689 antibiotic ABC transporter, ATP-binding protein K20490 nisF; lantibiotic transport system ATP-binding protein
D CLJ_B1656 ABC-type MDR transport system, permease component K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CLJ_B1497 putative membrane protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CLJ_B0571 sagI; drug ABC tranporter, ATP-binding/permease protein K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D CLJ_B1496 putative ABC transporter, permease protein K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CLJ_B0570 sagH; ABC transporter, ATP-binding/permease protein SagH K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CLJ_B1655 ABC-type MDR transport system, permease component K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D CLJ_B1495 ABC transporter, ATP-binding protein K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CLJ_B0569 sagG; ABC transporter, ATP-binding protein SagG K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CLJ_B1654 ABC-type MDR transport system, ATPase component K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D CLJ_B2591 putative membrane protein K19310 bcrB; bacitracin transport system permease protein
D CLJ_B2593 antibiotic ABC transporter, ATP-binding protein K19309 bcrA; bacitracin transport system ATP-binding protein
D CLJ_B0295 conserved hypothetical protein K11632 bceB; bacitracin transport system permease protein
D CLJ_B1507 peptide ABC transporter, Pep4E family, permease protein K11632 bceB; bacitracin transport system permease protein
D CLJ_B0294 bacitracin export ATP-binding protein BceA K11631 bceA; bacitracin transport system ATP-binding protein
D CLJ_B1506 peptide ABC transporter, Pep4E family, ATP-binding protein K11631 bceA; bacitracin transport system ATP-binding protein
D CLJ_B0376 peptide ABC transporter, Pep4E family, permease protein K11636 yxdM; putative ABC transport system permease protein
D CLJ_B1512 peptide ABC transporter, Pep4E family, permease protein K11636 yxdM; putative ABC transport system permease protein
D CLJ_B0375 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLJ_B1511 peptide ABC transporter, Pep4E family, ATP-binding protein K11635 yxdL; putative ABC transport system ATP-binding protein
D CLJ_B3015 ABC transporter, permease protein K16919 ytrC_D; acetoin utilization transport system permease protein
D CLJ_B3016 ABC transporter, ATP-binding protein K16921 ytrB; acetoin utilization transport system ATP-binding protein
D CLJ_B3693 efflux ABC transporter, permease protein, FtsX family K09811 ftsX; cell division transport system permease protein
D CLJ_0271 efflux ABC transporter, permease protein K09811 ftsX; cell division transport system permease protein
D CLJ_B3694 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D CLJ_0272 methionine import ATP-binding protein MetN K09812 ftsE; cell division transport system ATP-binding protein
D CLJ_B0693 ABC transporter, permease component K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJ_B0778 putative drug resistance ABC-2 type transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJ_B0827 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJ_B1231 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJ_B2590 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJ_B3636 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJ_B0815 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJ_B3170 putative membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D CLJ_B0642 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B3171 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B1246 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B0823 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B0691 ABC transporter, ATP-binding protein/LytTR DNA-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B0777 ABC Transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B0814 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B0883 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B0826 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B3637 putative bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B2132 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B1285 bacitracin transport ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B1013 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B1230 bcrA; bacitracin ABC transporter, ATP-binding protein BcrA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B3630 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B2352 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B3409 ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D CLJ_B2155 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B0673 putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B1263 putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B0108 membrane-spanning protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B0950 ABC transporter, ATP-binding/permease protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B0833 putative ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B3667 ABC transporter, ATP-binding protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B2354 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B0107 membrane-spanning protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B0330 peptide ABC transporter, Pep4E family, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B2353 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CLJ_B1265 putative oligopeptide ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B2355 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B2154 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B0109 macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B0123 putative macrolide efflux ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B3668 lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B0832 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B0674 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B3437 lipoprotein-releasing system ATP-binding protein LolD K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B0329 peptide ABC transporter, Pep4E family, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CLJ_B3068 ABC transporter, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D CLJ_B2023 transporter, monovalent cation:proton antiporter-2 family K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D CLJ_B0415 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CLJ_0019 mate efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CLJ_B0110 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D CLJ_B3071 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLJ_B2151 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLJ_B2331 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLJ_B3066 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLJ_B3009 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLJ_B2811 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLJ_B1152 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLJ_B0359 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D CLJ_B1723 major facilitator family transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D CLJ_B2332 inner membrane transport protein YeaN K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D CLJ_B1121 glpT; glycerol-3-phosphate transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter
D CLJ_B3746 ptsI; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D CLJ_B2622 ptsH; phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D CLJ_B0333 PTS system, glucose/glucoside family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B3064 ptbA; PTS system, glucose subfamily, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0325 PTS system, glucose family, EIIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B0344 PTS system, glucose family, IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-]
D CLJ_B1441 ptsG; PTS system, glucose-specific, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLJ_B2981 PTS system, glucose family, IIABC component K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D CLJ_B3065 nagE; PTS system, N-acetylglucosamine-specific, IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D CLJ_B0322 PTS system, maltose/glucose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B0342 PTS system, glucose/maltose-specfic, IIBC component K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208]
D CLJ_B1713 PTS system, glucose/glucoside family, IIBC component K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D CLJ_B1462 PTS system, IIBC component K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D CLJ_B0726 PTS system, beta-glucoside-specific, IIABC component K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D CLJ_B2192 treP; PTS system, trehalose-specific IIBC component K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D CLJ_B0331 PTS system, glucose/glucoside family, IIBC component K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-]
D CLJ_B3642 PTS system, lactose/cellobiose-specific family, IIA component K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205]
D CLJ_B3643 PTS system, lactose/cellobiose-specific family, IIB component K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205]
D CLJ_B3645 PTS system, lactose/cellobiose family, IIC component K02761 celB; cellobiose PTS system EIIC component
D CLJ_B3721 PTS system, glucitol/sorbitol-specific, IIA component K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198]
D CLJ_B3722 PTS system, glucitol/sorbitol-specific, IIBC component K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198]
D CLJ_B3723 PTS system, glucitol/sorbitol-specific, IIC component K02783 srlA; glucitol/sorbitol PTS system EIIC component
D CLJ_B3078 PTS system sorbose-specific iic component K02795 manY; mannose PTS system EIIC component
D CLJ_B3079 PTS system, mannose/fructose/sorbose family, IID component K02796 manZ; mannose PTS system EIID component
D CLJ_B2360 putative PTS system, L-ascorbate family, IIA component K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194]
D CLJ_B2359 putative PTS system, L-Ascorbate family, IIB component K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194]
D CLJ_B2358 putative PTS system, L-ascorbate family, IIC component K03475 ulaA; ascorbate PTS system EIIC component
D CLJ_B3013 glpF; glycerol uptake facilitator protein K02440 glpF; glycerol uptake facilitator
D CLJ_B1007 formate/nitrite transporter family protein K02598 nirC; nitrite transporter
D CLJ_B0635 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D CLJ_B3970 mechanosensitive ion channel family protein K22044 ybiO; moderate conductance mechanosensitive channel
D CLJ_B1172 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D CLJ_B2884 motA_2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B2438 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B2883 motB_2; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLJ_B2836 putative magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CLJ_B0083 transporter, CorA metal ion transporter family K03284 corA; magnesium transporter
D CLJ_B0797 conserved domain protein K08364 merP; periplasmic mercuric ion binding protein
D CLJ_B3163 transporter, HlyC/CorC family K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLJ_A0005 alpha-hemolysin K11032 hlyII; hemolysin II
D CLJ_0138 ha70; hemagglutinin component HA70 K16626 ha-70; hemagglutinin components HA-22/23/53
D CLJ_B0378 lrgA family protein K06518 cidA; holin-like protein
D CLJ_B0299 putative lysine-specific permease K11733 lysP; lysine-specific permease
D CLJ_B1695 arcD; arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D CLJ_B2699 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D CLJ_B0399 amino acid permease family protein K20265 gadC; glutamate:GABA antiporter
D CLJ_B0162 spore germination protein K06311 yndE; spore germination protein
D CLJ_B2182 spore germination protein K06311 yndE; spore germination protein
D CLJ_B2184 spore germination protein K06311 yndE; spore germination protein
D CLJ_B0179 ZIP transporter family protein K07238 TC.ZIP; zinc transporter, ZIP family
D CLJ_B1218 zinc transporter, ZIP family K07238 TC.ZIP; zinc transporter, ZIP family
D CLJ_B1652 conserved hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJ_B0902 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJ_B3664 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJ_B3918 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D CLJ_B2415 gntP; gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D CLJ_B1050 lctP; L-lactate permease K03303 lutP; lactate permease
D CLJ_B1178 choline/carnitine/betaine transporter K05020 opuD; glycine betaine transporter
D CLJ_B0733 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D CLJ_B2189 transporter, monovalent cation:proton antiporter-2 family K11105 cvrA; potassium/hydrogen antiporter
D CLJ_B0417 transporter, monovalent cation:proton antiporter-2 family K11105 cvrA; potassium/hydrogen antiporter
D CLJ_B3088 transporter, monovalent cation:proton antiporter-2 family K26730 napA; Na+:H+ antiporter
D CLJ_B3400 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D CLJ_B1432 putative Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D CLJ_B3399 potassium uptake protein, TrkA family K03499 trkA; trk/ktr system potassium uptake protein
D CLJ_B1431 putative Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D CLJ_B2278 codB; cytosine permease K10974 codB; cytosine permease
D CLJ_B1581 pyrP; uracil permease K02824 uraA; uracil permease
D CLJ_B3141 xanthine/uracil permease family protein K24206 uacT; uric acid transporter
D CLJ_B3477 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLJ_B2210 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLJ_B3155 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLJ_B1856 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CLJ_B0610 chromate transporter protein K07240 chrA; chromate transporter
D CLJ_B0611 chromate transport protein K07240 chrA; chromate transporter
D CLJ_B3633 sulfate permease, SulP family K03321 TC.SULP; sulfate permease, SulP family
D CLJ_B3752 Na/Pi-cotransporter family protein/PhoU family protein K03324 yjbB; phosphate:Na+ symporter
D CLJ_B1538 spoVB; stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLJ_B3866 putative stage V sporulation protein B K06409 spoVB; stage V sporulation protein B
D CLJ_B1537 polysaccharide biosynthesis family protein K06409 spoVB; stage V sporulation protein B
D CLJ_B3361 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CLJ_B2802 auxin efflux carrier family protein K24180 mleP; malate permease and related proteins
D CLJ_B0223 putative membrane protein K23675 fmnP; riboflavin transporter
D CLJ_B0637 putative proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D CLJ_B2850 putative membrane protein K16788 niaX; niacin transporter
D CLJ_B1562 cell cycle protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D CLJ_B1338 putative membrane protein K23242 mntP; manganese efflux pump family protein
D CLJ_B1332 conserved domain protein K15383 K15383; MtN3 and saliva related transmembrane protein
D CLJ_B1331 conserved domain protein K15383 K15383; MtN3 and saliva related transmembrane protein
D CLJ_B0316 DsbD family protein K06196 ccdA; cytochrome c-type biogenesis protein
D CLJ_B1997 putative cytochrome c-type biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D CLJ_B2917 capsular exopolysaccharide family protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3]
D CLJ_B2919 capsular polysaccharide biosynthsis protein K19420 epsA; protein tyrosine kinase modulator
D CLJ_B1076 feoA_2; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLJ_B1127 feoA_3; ferrous ion transport protein A K04758 feoA; ferrous iron transport protein A
D CLJ_B0857 feoA_1; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D CLJ_B1077 feoB_2; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLJ_B1126 feoB_3; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLJ_B0859 feoB_1; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D CLJ_B0130 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:cbi02044]
D CLJ_B1429 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLJ_B2094 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D CLJ_B2111 general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB
D CLJ_B2110 general secretion pathway protein K02653 pilC; type IV pilus assembly protein PilC
D CLJ_B2088 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D CLJ_B2769 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D CLJ_0201 putative type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLJ_0231 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLJ_0228 bacterial type II secretion system protein F domain protein K12510 tadB; tight adherence protein B
D CLJ_B1569 YGGT family protein K02221 yggT; YggT family protein
D CLJ_0218 putative type IV leader peptidase K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D CLJ_B3235 putative comE operon protein 1 K02237 comEA; competence protein ComEA
D CLJ_B0185 cytidine/deoxycytidylate deaminase family protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D CLJ_B0483 metallo-beta-lactamase family protein K02238 comEC; competence protein ComEC
D CLJ_B3226 ComEC/Rec2 family protein K02238 comEC; competence protein ComEC
D CLJ_B2502 hypothetical membrane spanning protein K02238 comEC; competence protein ComEC
D CLJ_B0215 putative ComF protein K02242 comFC; competence protein ComFC
D CLJ_B2877 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLJ_B0225 conserved hypothetical protein K04061 flhB2; flagellar biosynthesis protein
D CLJ_B2894 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLJ_B2892 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLJ_B2891 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLJ_B2970 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLJ_B2881 flagellar biosynthesis domain protein K02418 fliO; flagellar protein FliO/FliZ
D CLJ_B2880 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLJ_B2879 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLJ_B2878 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLJ_0213 ATPase involved in conjugal plasmid transfer K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8]
D CLJ_B0217 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CLJ_B3328 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CLJ_B3803 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CLJ_B3327 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CLJ_B0279 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CLJ_B3769 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CLJ_B2674 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CLJ_B2676 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CLJ_B3332 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CLJ_B3984 putative sporulation protein/membrane protein insertase, OxaA family K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:cbi02042]
D CLJ_0004 boNT_BvA4; botulinum neurotoxin type BvA4, BoNT/BvA4 K06011 boNT; botulinum neurotoxin [EC:3.4.24.69]
D CLJ_0133 boNT_BvB; botulinum neurotoxin type BvB, BoNT/BvB K06011 boNT; botulinum neurotoxin [EC:3.4.24.69]
D CLJ_0134 ntnH_2; botulinum neurotoxin type BvB, nontoxic-nonhemagglutinin component, NTNH K16623 ntnH; botulinum neurotoxin type non-toxic component
D CLJ_0005 ntnH_1; botulinum neurotoxin type BivA4, nontoxic-nonhemagglutinin component, NTNH K16623 ntnH; botulinum neurotoxin type non-toxic component
D CLJ_0136 ha33; hemagglutinin component HA33 K16624 ha-33; main hemagglutinin component
D CLJ_0137 ha17; hemagglutinin component HA17 K16625 ha-17; hemagglutinin component HA-17
D CLJ_0138 ha70; hemagglutinin component HA70 K16626 ha-70; hemagglutinin components HA-22/23/53
D CLJ_B1620 C4-dicarboxylate transporter/malic acid transport protein K11041 eta; exfoliative toxin A/B
D CLJ_A0005 alpha-hemolysin K11032 hlyII; hemolysin II
D CLJ_B3163 transporter, HlyC/CorC family K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CLJ_B0563 bacteriocin protoxin, streptolysin S family K11046 sagA; streptolysin S associated protein
D CLJ_B1553 hlyIII; hemolysin III K11068 hlyIII; hemolysin III
D CLJ_B1696 putative hemolysin III K11068 hlyIII; hemolysin III
D CLJ_B2864 putative phospholipase C K01114 plc; phospholipase C [EC:3.1.4.3]
D CLJ_B1730 colG; collagenase K01387 colA; microbial collagenase [EC:3.4.24.3]
D CLJ_B2122 cloSI; clostripain K08587 cloSI; clostripain [EC:3.4.22.8]
C 02022 Two-component system [BR:cbi02022]
D CLJ_B2757 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D CLJ_B2758 putative phosphate regulon DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJ_B0408 DNA-binding response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D CLJ_B0351 sensor histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D CLJ_B0350 DNA-binding response regulator K07770 cssR; two-component system, OmpR family, response regulator CssR
D CLJ_B1015 DNA-binding response regulator K07668 vicR; two-component system, OmpR family, response regulator VicR
D CLJ_B0293 periplasmic sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D CLJ_B0292 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D CLJ_B0373 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLJ_B1510 sensor histidine kinase K11633 yxdK; two-component system, OmpR family, sensor histidine kinase YxdK [EC:2.7.13.3]
D CLJ_B0372 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLJ_B1509 DNA-binding response regulator K11634 yxdJ; two-component system, OmpR family, response regulator YxdJ
D CLJ_B2173 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJ_B2174 DNA-binding response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLJ_B0421 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
D CLJ_B2613 sensor histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D CLJ_B2614 DNA-binding response regulator K18941 arlR; two-component system, OmpR family, response regulator ArlR
D CLJ_B2128 sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJ_B1693 putative lantibiotic biosynthesis sensor histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D CLJ_B1692 putative lantibiotic biosynthesis regulatory protein K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJ_B2129 DNA-binding response regulator K20488 nisR; two-component system, OmpR family, lantibiotic biosynthesis response regulator NisR/SpaR
D CLJ_B0825 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CLJ_B0951 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CLJ_B2058 spo0A; sporulation transcription factor Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D CLJ_B1229 sensor histidine kinase K07706 agrC; two-component system, LytTR family, sensor histidine kinase AgrC [EC:2.7.13.3]
D CLJ_B1228 DNA-binding response regulator, LytTr family K07707 agrA; two-component system, LytTR family, response regulator AgrA
D CLJ_B3590 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D CLJ_B3589 DNA-binding response regulator, LytTr family K02477 K02477; two-component system, LytTR family, response regulator
D CLJ_B2975 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJ_B1043 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJ_B2973 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJ_B2977 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLJ_B1957 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLJ_B0696 sensor histidine kinase K07717 glnK; two-component system, sensor histidine kinase GlnK [EC:2.7.13.3]
D CLJ_B0695 response regulator K07719 glnL; two-component system, response regulator GlnL
C 02035 Bacterial motility proteins [BR:cbi02035]
D CLJ_B2975 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CLJ_B2972 putative chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLJ_B2979 cheW; chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CLJ_B1966 cheX; chemotaxis protein CheX K03409 cheX; chemotaxis protein CheX
D CLJ_B2974 cheC; chemotaxis protein CheC K03410 cheC; chemotaxis protein CheC
D CLJ_B2978 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D CLJ_B2976 cheR; chemotaxis protein methyltransferase, CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CLJ_B2977 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CLJ_B1043 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJ_B2973 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CLJ_B1957 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CLJ_B3022 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0457 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0508 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0633 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0644 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0784 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B0765 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1624 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1953 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1472 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B1668 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B2121 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3485 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3020 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3032 putative methyl-accepting chemotaxis protein TlpC K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B3055 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B2204 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CLJ_B2892 fliH; flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH
D CLJ_B2891 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CLJ_B2890 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D CLJ_B2881 flagellar biosynthesis domain protein K02418 fliO; flagellar protein FliO/FliZ
D CLJ_B2880 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CLJ_B2879 fliQ; flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CLJ_B2878 flagellar biosynthetic protein FliR/FlhB K13820 fliR-flhB; flagellar biosynthesis protein FliR/FlhB
D CLJ_B2877 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CLJ_B2893 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CLJ_B2971 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CLJ_B2970 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CLJ_B2894 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CLJ_B2882 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D CLJ_B2895 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CLJ_B2889 fliK; flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D CLJ_B2897 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CLJ_B2896 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CLJ_B2888 flgD; flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CLJ_B2870 flagellar basal body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CLJ_B2869 flagellar basal body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D CLJ_B2886 flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE
D CLJ_B2967 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D CLJ_B2966 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D CLJ_B2898 flagellin K02406 fliC; flagellin
D CLJ_B2926 fliC; flagellin K02406 fliC; flagellin
D CLJ_B2957 flagellin K02406 fliC; flagellin
D CLJ_B2958 flagellin K02406 fliC; flagellin
D CLJ_B0289 flagellin protein K02406 fliC; flagellin
D CLJ_B2960 fliD; Flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D CLJ_B2961 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CLJ_B2873 fliA; RNA polymerase sigma factor for flagellar operon FliA K02405 fliA; RNA polymerase sigma factor FliA
D CLJ_B2884 motA_2; chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B2438 putative chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D CLJ_B2883 motB_2; chemotaxis protein MotB K02557 motB; chemotaxis protein MotB
D CLJ_B2965 fliW; flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D CLJ_B2969 negative regulator of flagellin synthesis FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D CLJ_B2963 flaG family protein K06603 flaG; flagellar protein FlaG
D CLJ_B2885 flagellar protein FlbD K02385 flbD; flagellar protein FlbD
D CLJ_B2876 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CLJ_B2875 flhG; flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D CLJ_0218 putative type IV leader peptidase K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52]
D CLJ_B2769 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D CLJ_B2094 putative type IV pilin K02650 pilA; type IV pilus assembly protein PilA
D CLJ_B2111 general secretion pathway protein E K02652 pilB; type IV pilus assembly protein PilB
D CLJ_B2110 general secretion pathway protein K02653 pilC; type IV pilus assembly protein PilC
D CLJ_B1429 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CLJ_B2088 hypothetical protein K02663 pilN; type IV pilus assembly protein PilN
D CLJ_0201 putative type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D CLJ_0231 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins [BR:cbi03037]
D CLJ_B2023 transporter, monovalent cation:proton antiporter-2 family K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:cbi04812]
D CLJ_B3260 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJ_B0202 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJ_0217 conserved hypothetical protein K18640 parM; plasmid segregation protein ParM
D CLJ_0148 hypothetical protein K18640 parM; plasmid segregation protein ParM
D CLJ_B2765 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLJ_B2766 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CLJ_B3256 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D CLJ_B3255 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D CLJ_B3254 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D CLJ_B3978 soj; sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D CLJ_B3977 stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CLJ_B3979 parB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cbi04147]
D CLJ_B2190 hsp90; heat shock protein K04079 HSP90A; molecular chaperone HtpG
D CLJ_B0278 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CLJ_B0274 gap_1; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CLJ_B0275 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CLJ_B3675 pykA; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CLJ_B1261 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D CLJ_B3579 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CLJ_B3216 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CLJ_B3559 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CLJ_B3576 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CLJ_B3791 tuf_1; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLJ_B3805 tuf_2; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CLJ_B3211 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLJ_B1427 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CLJ_B1617 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CLJ_B2814 AMP-binding protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D CLJ_B3472 thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D CLJ_B3768 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CLJ_B3325 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLJ_B2209 phosphoribosyl transferase domain protein K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CLJ_B2900 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CLJ_B2901 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CLJ_B3140 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D CLJ_B3012 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D CLJ_B3894 putative glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CLJ_B0974 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CLJ_B1174 D-isomer specific 2-hydroxyacid dehydrogenase family protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CLJ_B3128 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CLJ_B1743 acoL; TPP-dependent acetoin dehydrogenase complex, E3 component, dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B0772 glycine cleavage system, dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D CLJ_B3469 electron transfer flavoprotein, alpha subunit/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit
D CLJ_B0276 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cbi02048]
D CLJ_B2385 cas6; CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D CLJ_B2384 cmr1; crispr-associated ramp protein, Cmr1 family K07061 cmr1; CRISPR-associated protein Cmr1
D CLJ_B2383 conserved hypothetical protein K19076 cmr2; CRISPR-associated protein Cmr2
D CLJ_B2382 CRISPR-associated protein K09127 cmr3; CRISPR-associated protein Cmr3
D CLJ_B2380 cmr4; crispr-associated ramp protein, Cmr4 family K09000 cmr4; CRISPR-associated protein Cmr4
D CLJ_B2379 cmr5; crispr-associated protein, Cmr5 family K19141 cmr5; CRISPR-associated protein Cmr5
D CLJ_B2378 crispr-associated ramp protein, Cmr6 family K19142 cmr6; CRISPR-associated protein Cmr6
D CLJ_B0753 putative type I restriction-modification system, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D CLJ_B0747 putative type I restriction-modification system, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D CLJ_B0746 putative type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CLJ_B3356 conserved hypothetical protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CLJ_B1379 DNA (cytosine-5-)-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D CLJ_B1393 Gp54 protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CLJ_B3699 PemK family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLJ_B0612 PemK family protein K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CLJ_B3700 toxin-antitoxin system, antitoxin component K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D CLJ_0066 conserved domain protein K03973 pspC; phage shock protein C
D CLJ_0294 death-on-curing family protein K07341 doc; death on curing protein
D CLJ_B2765 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CLJ_B3260 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJ_B0202 mbl; Mbl protein K03569 mreB; rod shape-determining protein MreB and related proteins
D CLJ_B2999 DNA topoisomerase, GyrA/ParC subunit family K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D CLJ_B3000 DNA topoisomerase, GyrB/ParE subunit family K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D CLJ_B1143 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CLJ_B1223 aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CLJ_B2798 nifS; cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels [BR:cbi04040]
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cbi01504]
D CLJ_B3097 florfenicol/chloramphenicol resistance protein K15632 cfr; 23S rRNA (adenine-C8)-methyltransferase [EC:2.1.1.224]
D CLJ_B0634 ABC transporter, ATP-binding protein K18231 msr; macrolide transport system ATP-binding/permease protein
D CLJ_B3098 drug resistance ABC transporter, RA2 family, ATP-binding protein K19350 lsa; lincosamide and streptogramin A transport system ATP-binding/permease protein
D CLJ_B0301 chloramphenicol acetyltransferase K18234 vat; virginiamycin A acetyltransferase [EC:2.3.1.-]
D CLJ_B2225 chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLJ_B3111 chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLJ_B0701 cat; chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D CLJ_B2414 fosfomycin resistance protein FosX K21252 fosX; fosfomycin resistance protein FosX
D CLJ_B2173 sensor histidine kinase K18345 vanSB; two-component system, OmpR family, sensor histidine kinase VanS [EC:2.7.13.3]
D CLJ_B2174 DNA-binding response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D CLJ_B1034 serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B1080 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B0688 D-alanyl-D-alanine carboxypeptidase family protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D CLJ_B0421 DNA-binding response regulator K18349 vanRC; two-component system, OmpR family, response regulator VanR
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cbi00537]
D CLJ_B1261 dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cbi03100]
D CLJ_B0013 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJ_B3834 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJ_B0476 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CLJ_B0026 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3523 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3531 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3538 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B0030 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3519 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CLJ_B3828 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJ_B3827 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJ_B0482 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CLJ_B3413 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJ_B3940 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJ_B3943 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJ_B3947 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CLJ_B0081 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLJ_B3410 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CLJ_B0234 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJ_B3528 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJ_B3536 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CLJ_B3942 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJ_B3945 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJ_B3949 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJ_B0551 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CLJ_B3411 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3533 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3525 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3520 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3524 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3532 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3539 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3807 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CLJ_B3529 tRNA-His K14226 tRNA-His; tRNA His
D CLJ_B3537 tRNA-His K14226 tRNA-His; tRNA His
D CLJ_B0477 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLJ_B3832 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CLJ_B3855 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3858 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3526 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3534 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3270 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CLJ_B3530 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B3522 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B0053 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B3535 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B0060 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B3527 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CLJ_B0012 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3835 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3852 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3856 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3853 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3854 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B3857 tRNA-Met K14230 tRNA-Met; tRNA Met
D CLJ_B0067 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJ_B3412 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJ_B0074 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CLJ_B3521 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJ_B3880 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJ_B3540 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CLJ_B0023 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0025 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0022 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0024 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CLJ_B0205 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B3946 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B3939 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B0208 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B3806 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CLJ_B3597 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CLJ_B0206 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLJ_B0209 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CLJ_B0207 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3948 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3941 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3944 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3414 tRNA-Val K14237 tRNA-Val; tRNA Val
D CLJ_B3231 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CLJ_B0008 rrs_1; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0056 rrs_3; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0063 rrs_4; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B3833 rrs_8; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B3839 rrs_9; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0070 rrs_5; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0475 rrs_7; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0049 rrs_2; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0076 rrs_6; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CLJ_B0051 rrl_2; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0010 rrl_1; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B3830 rrl_8; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0072 rrl_5; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B3837 rrl_9; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0065 rrl_4; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0078 rrl_6; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0480 rrl_7; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0058 rrl_3; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CLJ_B0011 rrf_1; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B3829 rrf_8; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0052 rrf_2; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0059 rrf_3; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0073 rrf_5; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0079 rrf_6; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0066 rrf_4; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B3836 rrf_9; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0481 rrf_7; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D CLJ_B0035 srpB; bacterial signal recognition particle RNA K01983 ffs; SRP RNA
D CLJ_B3189 bacterial RNase P class A K01978 rnpB; M1 RNA
D CLJ_B0284 ssrA; ssrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CLJ_B2416 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409]
D CLJ_B1739 acoA; TPP-dependent acetoin dehydrogenase complex, E1 component, alpha subunit K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-]
D CLJ_B1740 acoB; TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-]
D CLJ_B3568 acyl-CoA dehydrogenase family protein K24016 acdA; 3-(aryl)acrylate reductase [EC:1.3.8.15]
D CLJ_B0591 ceo; N(5)-(carboxyethyl)ornithine synthase K00298 ceo; N5-(carboxyethyl)ornithine synthase [EC:1.5.1.24]
D CLJ_B2849 metallo-beta-lactamase family protein/flavodoxin K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D CLJ_B1505 putative methionine-S-sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CLJ_B2126 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CLJ_B2585 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CLJ_B0578 putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CLJ_B0896 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D CLJ_B3615 superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D CLJ_B1964 ferritin family protein K02217 ftnA; ferritin [EC:1.16.3.2]
D CLJ_B1753 oxidoreductase, NAD/FAD-binding K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CLJ_B3586 oxidoreductase, NAD-binding K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D CLJ_B0809 arsenate reductase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CLJ_B1300 grdE; glycine reductase, subunits ABC K10671 grdE; glycine reductase complex component B subunit alpha and beta [EC:1.21.4.2]
D CLJ_B1301 glycine reductase complex component B, subunit gamma, selenocysteine-containing protein K10672 grdB; glycine reductase complex component B subunit gamma [EC:1.21.4.2]
D CLJ_B1307 grdD; glycine reductase complex component C, alpha subunit K21576 grdD; glycine/sarcosine/betaine reductase complex component C subunit alpha [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLJ_B1306 grdC; glycine reductase complex component C, beta subunit K21577 grdC; glycine/sarcosine/betaine reductase complex component C subunit beta [EC:1.21.4.2 1.21.4.3 1.21.4.4]
D CLJ_B1047 putative anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CLJ_B0132 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D CLJ_B3487 pflA; pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLJ_B3456 glycyl-radical enzyme activating family protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLJ_B3909 radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLJ_B3888 radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D CLJ_B2321 glycyl-radical enzyme activating family protein K20037 cutD; choline trimethylamine-lyase activating enzyme [EC:1.97.1.-]
D CLJ_B0898 nitroreductase family protein K15976 K15976; putative NAD(P)H nitroreductase [EC:1.-.-.-]
D CLJ_B0698 cfa; cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CLJ_B1584 putative methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D CLJ_B1165 maa; maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CLJ_B2366 transferase, hexapeptide repeat family K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D CLJ_B2467 acetyltransferase, GNAT family K03826 yiaC; putative acetyltransferase [EC:2.3.1.-]
D CLJ_B0904 acetyltransferase, GNAT family K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D CLJ_B1023 acetyltransferase, GNAT family K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D CLJ_B2602 tgl; protein-glutamine gamma-glutamyltransferase K00686 tgl; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D CLJ_B3367 glycosyl transferase, group 1 family K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D CLJ_B0143 conserved hypothetical protein K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D CLJ_B3481 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CLJ_B0433 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D CLJ_B2417 conserved hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220]
D CLJ_B2197 pfkB_2; 1-phosphofructokinase K25602 tagK; D-tagatose-1-phosphate kinase [EC:2.7.1.234]
D CLJ_B2726 DAK2 domain protein K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D CLJ_B3950 conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D CLJ_B3105 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLJ_0278 group II intron reverse transcriptase/maturase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D CLJ_B3819 putative DNA-binding protein K07067 disA; diadenylate cyclase [EC:2.7.7.85]
D CLJ_B3738 conserved hypothetical protein TIGR00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D CLJ_B1236 conserved hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D CLJ_B2812 putative phosphoenolpyruvate synthase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D CLJ_B3353 spoIIAB; anti-sigma F factor K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D CLJ_B2838 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D CLJ_B3822 ATP:guanido phosphotransferase domain protein K19405 mcsB; protein arginine kinase [EC:2.7.14.1]
D CLJ_B2407 CoA-transferase, family III K20882 hadA; (R)-2-hydroxy-4-methylpentanoate CoA-transferase [EC:2.8.3.24]
D CLJ_B2459 putative RNAase regulator K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D CLJ_B1202 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CLJ_B3851 spoIIE; stage II sporulation protein E K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D CLJ_B2918 exopolysaccharide biosynthesis protein K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D CLJ_B2834 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D CLJ_B3962 DHH family protein K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D CLJ_B3206 putative hydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D CLJ_B0115 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CLJ_B0117 putative primase K05985 rnmV; ribonuclease M5 [EC:3.1.26.8]
D CLJ_0002 thermonuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CLJ_B3094 putative phage related N-acetylmuramoyl-L-alanine amidase K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CLJ_B2600 def_1; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLJ_B0917 putative peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLJ_B2852 def_3; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLJ_B2740 def_2; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CLJ_B0271 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLJ_B3028 polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D CLJ_B3357 polysaccharide deacetylase family protein K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D CLJ_B3238 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CLJ_B2166 putative endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CLJ_B3461 ATPase, AAA family K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D CLJ_B0181 low molecular weight protein tyrosine phosphatase K20201 ywlE; protein arginine phosphatase [EC:3.9.1.2]
D CLJ_B2994 uvdE; UV damage endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D CLJ_B0264 splB; spore photoproduct lyase K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D CLJ_B2259 myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D CLJ_B3703 carbohydrate kinase family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CLJ_B2406 putative (R)-2-hydroxyglutaryl-CoA dehydratase, alpha subunit K20025 hadB; (R)-2-hydroxyisocaproyl-CoA dehydratase alpha subunit [EC:4.2.1.157]
D CLJ_B2405 putative (R)-2-hydroxyglutaryl-CoA dehydratase, beta subunit K20026 hadC; (R)-2-hydroxyisocaproyl-CoA dehydratase beta subunit [EC:4.2.1.157]
D CLJ_B3570 fldB; R-phenyllactate dehydratase, medium subunit K23110 fldB; (R)-3-(aryl)lactoyl-CoA dehydratase alpha subunit [EC:4.2.1.175]
D CLJ_B3569 fldC; R-phenyllactate dehydratase, small subunit K23111 fldC; (R)-3-(aryl)lactoyl-CoA dehydratase beta subunit [EC:4.2.1.175]
D CLJ_B3142 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D CLJ_B2322 formate acetyltransferase K20038 cutC; choline trimethylamine-lyase [EC:4.3.99.4]
D CLJ_B1224 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CLJ_B0142 conserved hypothetical protein TIGR00268 K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D CLJ_B0141 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D CLJ_B2400 putative CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLJ_B3571 fldI; R-phenyllactate dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLJ_B1663 putative CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLJ_B3516 hgdC; (R)-hydroxyglutaryl-CoA dehydratase activator K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D CLJ_B0158 cphA; cyanophycin synthase (L-aspartate-adding) K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30]
D CLJ_B0425 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D CLJ_B0424 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D CLJ_B0429 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D CLJ_B0608 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLJ_B2866 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLJ_B1648 cation-transporting ATPase, P-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D CLJ_B0550 cadA_1; cadmium-exporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D CLJ_B3124 mgtA; magnesium-importing ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
D CLJ_B1353 cation-transporting ATPase, P-type K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D CLJ_B0041 sfsA; sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D CLJ_B1041 rubrerythrin family protein K19824 fprB; rubrerythrin
D CLJ_B3464 iron-sulfur cluster-binding protein K05337 fer; ferredoxin
D CLJ_B0126 iron-sulfur cluster-binding protein K05337 fer; ferredoxin
D CLJ_B0426 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D CLJ_B0427 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D CLJ_B0428 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D CLJ_B2797 nifU; FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D CLJ_B1176 metallo-beta-lactamase family protein/flavodoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin
D CLJ_B0764 hypothetical protein K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D CLJ_B3034 iron-sulfur cluster-binding protein K02574 napH; ferredoxin-type protein NapH
D CLJ_B3470 electron transfer flavoprotein, beta subunit/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
D CLJ_B0266 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLJ_B0678 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D CLJ_B1357 DegV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CLJ_B2317 ethanolamine utilization protein EutJ family protein K04024 eutJ; ethanolamine utilization protein EutJ
D CLJ_B2319 GTP-binding protein K04029 eutP; ethanolamine utilization protein EutP
D CLJ_B2314 putative ethanolamine utilization protein EutQ K04030 eutQ; ethanolamine utilization protein EutQ
D CLJ_B2320 putative ethanolamine utilization protein EutS K04031 eutS; ethanolamine utilization protein EutS
D CLJ_B1567 conserved hypothetical protein TIGR00044 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CLJ_B3176 putative cell wall hydrolase CwlJ K01449 cwlJ; cell wall hydrolase
D CLJ_B3740 cell wall hydrolase family protein K01449 cwlJ; cell wall hydrolase
C 99987 Cofactor metabolism
D CLJ_B0028 conserved hypothetical protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CLJ_B3724 gutM; glucitol operon activator protein K02466 gutM; glucitol operon activator protein
D CLJ_B1501 cspA; major cold shock protein CspA K03704 cspA; cold shock protein
D CLJ_B0336 cold shock protein K03704 cspA; cold shock protein
D CLJ_B2576 anti-repressor K07741 antB; anti-repressor protein
D CLJ_B1769 antirepressor, phage associated K07741 antB; anti-repressor protein
D CLJ_B0221 RNA-binding protein K06959 tex; protein Tex
D CLJ_B2745 conserved hypothetical protein K09777 remA; extracellular matrix regulatory protein A
D CLJ_B0005 conserved hypothetical protein K24648 remB; extracellular matrix regulatory protein B
C 99974 Translation
D CLJ_B3859 putative RNA-binding protein K07571 K07571; S1 RNA binding domain protein
D CLJ_B1145 metallo-beta-lactamase family protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D CLJ_B3823 UVR domain protein K19411 mcsA; protein arginine kinase activator
D CLJ_B3505 tig; trigger factor K03545 tig; trigger factor
D CLJ_B0282 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CLJ_B2011 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CLJ_B2664 putative Mg chelatase K07391 comM; magnesium chelatase family protein
D CLJ_B3146 conserved hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor
D CLJ_B3147 putative xanthine dehydrogenase accessory factor K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D CLJ_B2285 DNA methylAse containing a Zn-ribbon K07445 K07445; putative DNA methylase
D CLJ_0047 resolvase domain protein K07450 K07450; putative resolvase
D CLJ_B3261 DNA repair protein, RadC family K03630 radC; DNA repair protein RadC
D CLJ_B2665 conserved hypothetical protein TIGR00252 K07460 yraN; putative endonuclease
D CLJ_B3628 GIY-YIG domain protein K07461 K07461; putative endonuclease
D CLJ_B2663 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D CLJ_B2507 DNA uptake protein K04096 smf; DNA processing protein
D CLJ_B1812 phage terminase small subunit K07474 xtmA; phage terminase small subunit
D CLJ_B2539 phage terminase, small subunit, PBSX family K07474 xtmA; phage terminase small subunit
D CLJ_B1394 terminase small subunit K07474 xtmA; phage terminase small subunit
D CLJ_B2800 ATPase, AAA family K07478 ycaJ; putative ATPase
D CLJ_B0381 transposase K07483 K07483; transposase
D CLJ_B0562 transposase K07483 K07483; transposase
D CLJ_B0948 transposase K07483 K07483; transposase
D CLJ_B1705 transposase K07483 K07483; transposase
D CLJ_B1519 transposase K07483 K07483; transposase
D CLJ_B2249 transposase K07483 K07483; transposase
D CLJ_B3075 transposase K07483 K07483; transposase
D CLJ_B3181 transposase K07483 K07483; transposase
D CLJ_B3439 transposase K07483 K07483; transposase
D CLJ_0074 transposase -family protein K07491 rayT; REP-associated tyrosine transposase
D CLJ_0049 transposase K07491 rayT; REP-associated tyrosine transposase
D CLJ_0072 transposase K07491 rayT; REP-associated tyrosine transposase
D CLJ_0050 transposase K07496 K07496; putative transposase
D CLJ_0073 transposase K07496 K07496; putative transposase
D CLJ_0035 transposase, family K07496 K07496; putative transposase
D CLJ_0069 transposase, family K07496 K07496; putative transposase
D CLJ_0076 transposase K07496 K07496; putative transposase
D CLJ_0084 transposase K07496 K07496; putative transposase
D CLJ_0089 transposase K07496 K07496; putative transposase
D CLJ_0281 transposase K07496 K07496; putative transposase
D CLJ_B0380 transposase K07497 K07497; putative transposase
D CLJ_B0561 transposase K07497 K07497; putative transposase
D CLJ_B0949 transposase K07497 K07497; putative transposase
D CLJ_B1704 transposase K07497 K07497; putative transposase
D CLJ_B1518 transposase K07497 K07497; putative transposase
D CLJ_B2248 transposase K07497 K07497; putative transposase
D CLJ_B3182 transposase K07497 K07497; putative transposase
D CLJ_B3440 transposase K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CLJ_0152 phage shock protein A K03969 pspA; phage shock protein A
D CLJ_B1182 rhodanese domain protein K03972 pspE; phage shock protein E
D CLJ_B0037 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CLJ_B2399 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLJ_B0604 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D CLJ_B1639 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CLJ_B1945 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CLJ_B2369 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CLJ_B2478 amino acid/peptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CLJ_B0423 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLJ_B3914 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D CLJ_B2251 sodium:neurotransmitter symporter family protein K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CLJ_B3157 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLJ_B1149 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLJ_B1150 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLJ_B2806 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLJ_B2807 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLJ_B1342 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLJ_B1288 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D CLJ_B3574 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CLJ_B0855 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D CLJ_B0682 nucleoside transporter, NupC family K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D CLJ_B0730 ric; iron-sulfur cluster repair di-iron protein K07322 ytfE; regulator of cell morphogenesis and NO signaling
D CLJ_B0040 bofA; sigma-K factor processing regulatory protein BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D CLJ_B1270 cotJB; CotJB protein K06333 cotJB; spore coat protein JB
D CLJ_B1271 cotJC; CotJC protein K06334 cotJC; spore coat protein JC
D CLJ_B3983 jag; jag protein K06346 jag; spoIIIJ-associated protein
D CLJ_B0104 spmA; spore maturation protein A K06373 spmA; spore maturation protein A
D CLJ_B0105 spmB; spore maturation protein B K06374 spmB; spore maturation protein B
D CLJ_B2583 stage 0 sporulation regulatory protein K06376 spo0E; stage 0 sporulation regulatory protein
D CLJ_B3354 spoIIAA; anti-sigma F factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D CLJ_B2040 spoIIM; stage II sporulation protein M K06384 spoIIM; stage II sporulation protein M
D CLJ_B3222 stage II sporulation protein K06385 spoIIP; stage II sporulation protein P
D CLJ_B0164 spoIIR; stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D CLJ_B2082 spoIIIAA; stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D CLJ_B2081 spoIIIAB; stage III sporulation protein AB K06391 spoIIIAB; stage III sporulation protein AB
D CLJ_B2080 stage III sporulation protein AC K06392 spoIIIAC; stage III sporulation protein AC
D CLJ_B2079 spoIIIAD; stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D CLJ_B2078 spoIIIAE; stage III sporulation protein AE K06394 spoIIIAE; stage III sporulation protein AE
D CLJ_B2077 spoIIIAF; stage III sporulation protein AF K06395 spoIIIAF; stage III sporulation protein AF
D CLJ_B2076 spoIIIAG; stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D CLJ_B2075 putative stage III sporulation protein AH K06397 spoIIIAH; stage III sporulation protein AH
D CLJ_B2748 spoIVA; stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D CLJ_B2581 resolvase, N-domain protein K06400 spoIVCA; site-specific DNA recombinase
D CLJ_B3351 spoVAC_2; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D CLJ_B0311 spoVAC_1; stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D CLJ_B3350 spoVAD_2; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D CLJ_B0310 spoVAD_1; stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D CLJ_B3349 spoVAE_2; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D CLJ_B0309 spoVAE_1; stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D CLJ_B1660 stage V sporulation protein AF K06408 spoVAF; stage V sporulation protein AF
D CLJ_B3876 spoVG; stage V sporulation protein G K06412 spoVG; stage V sporulation protein G
D CLJ_B2627 spoVS; stage V sporulation protein S K06416 spoVS; stage V sporulation protein S
D CLJ_B2948 cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D CLJ_B1277 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor)
D CLJ_B0842 small acid-soluble spore protein, H-type K06425 sspH; small acid-soluble spore protein H (minor)
D CLJ_B1081 tlp; small, acid-soluble spore protein tlp K06434 tlp; small acid-soluble spore protein (thioredoxin-like protein)
D CLJ_B0153 sporulation peptidase YabG K06436 yabG; spore coat assemly protein
D CLJ_B3207 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D CLJ_B2181 spore germination protein GerA K06295 gerKA; spore germination protein KA
D CLJ_B3026 gerAA; spore germination protein, GerAA K06295 gerKA; spore germination protein KA
D CLJ_B2183 germination protein, GerC family K06308 yfkR; spore germination protein
D CLJ_B0161 spore germination protein K06310 yndD; spore germination protein
D CLJ_B0166 ypeB; germination protein YpeB K06313 ypeB; spore germination protein
C 99993 Cell motility
D CLJ_B3091 tfoX domain protein K07343 tfoX; DNA transformation protein and related proteins
D CLJ_B0781 conserved hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D CLJ_B0631 carbon starvation protein CstA K06200 cstA; carbon starvation protein
D CLJ_B2788 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D CLJ_B0558 PhoH family protein K07175 phoH2; PhoH-like ATPase
C 99992 Structural proteins
D CLJ_B1419 autolytic lysozyme K07273 acm; lysozyme
D CLJ_0012 LycA K07273 acm; lysozyme
D CLJ_B0122 putative macrolide efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D CLJ_B1199 conserved hypothetical protein K21463 tcaA; membrane-associated protein TcaA
C 99994 Others
D CLJ_B2752 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D CLJ_B0594 hemerythrin-like metal-binding domain protein K07216 hr; hemerythrin
D CLJ_B2145 putative molybdopterin biosynthesis enzyme MoeA / molybdate binding domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CLJ_B2451 acetyltransferase, GNAT family K02348 elaA; ElaA protein
D CLJ_B3682 PHP domain protein K04477 ycdX; putative hydrolase
D CLJ_B0704 csaA; CsaA protein K06878 K06878; tRNA-binding protein
D CLJ_B0661 tRNA-binding domain protein K06878 K06878; tRNA-binding protein
D CLJ_B1590 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D CLJ_B0510 phospholipase family protein K07001 K07001; NTE family protein
D CLJ_B2949 HAD-superfamily hydrolase, subfamily IA, variant 1 K07025 K07025; putative hydrolase of the HAD superfamily
D CLJ_B3684 putative metal-dependent hydrolase, membrane-bound K07038 K07038; inner membrane protein
D CLJ_B3708 YihY family protein K07058 K07058; membrane protein
D CLJ_B0536 lemA family protein K03744 lemA; LemA protein
D CLJ_B0721 putative SanA protein K03748 sanA; SanA protein
D CLJ_B1036 putative phage infection protein K01421 yhgE; putative membrane protein
D CLJ_B1037 putative phage infection protein K01421 yhgE; putative membrane protein
D CLJ_B1090 conserved hypothetical protein K08982 K08982; putative membrane protein
C 99997 Function unknown
D CLJ_B0667 radical SAM domain protein K06871 K06871; uncharacterized protein
D CLJ_B3329 radical SAM domain protein K06871 K06871; uncharacterized protein
D CLJ_B2240 radical SAM-family protein K06871 K06871; uncharacterized protein
D CLJ_B0537 putative lipoprotein K06872 K06872; uncharacterized protein
D CLJ_B0538 conserved hypothetical protein K06872 K06872; uncharacterized protein
D CLJ_B1109 dTMP kinase K06888 K06888; uncharacterized protein
D CLJ_B0628 conserved hypothetical protein K06889 K06889; uncharacterized protein
D CLJ_B2229 conserved hypothetical protein K06889 K06889; uncharacterized protein
D CLJ_B0924 alpha/beta hydrolase K06889 K06889; uncharacterized protein
D CLJ_B0260 conserved hypothetical protein K06889 K06889; uncharacterized protein
D CLJ_B3951 CoA-binding protein K06929 K06929; uncharacterized protein
D CLJ_B1488 conserved hypothetical protein K06933 K06933; uncharacterized protein
D CLJ_B2672 conserved hypothetical protein K06960 K06960; uncharacterized protein
D CLJ_B3809 conserved hypothetical protein K06962 K06962; uncharacterized protein
D CLJ_B2738 putative neutral zinc metallopeptidase K06973 K06973; uncharacterized protein
D CLJ_B1358 nimB; 5-nitroimidazole antibiotic resistance protein NimB K07005 K07005; uncharacterized protein
D CLJ_B0881 nimA; 5-nitroimidazole antibiotic resistance protein NimA K07005 K07005; uncharacterized protein
D CLJ_B0796 amidohydrolase family protein K07045 K07045; uncharacterized protein
D CLJ_B2226 conserved hypothetical protein K07069 K07069; uncharacterized protein
D CLJ_B2412 conserved hypothetical protein K07078 K07078; uncharacterized protein
D CLJ_B1610 oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D CLJ_B3674 oxidoreductase, aldo/keto reductase family K07079 K07079; uncharacterized protein
D CLJ_B3116 putative membrane protein K07090 K07090; uncharacterized protein
D CLJ_B1042 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D CLJ_B3541 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D CLJ_B3482 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D CLJ_B0226 Ser/Thr protein phosphatase family protein K07099 K07099; uncharacterized protein
D CLJ_B0015 transcriptional regulator, biotin repressor family K07105 K07105; uncharacterized protein
D CLJ_B1684 putative membrane protein K07112 K07112; uncharacterized protein
D CLJ_B1688 putative membrane protein K07112 K07112; uncharacterized protein
D CLJ_B1682 putative membrane protein K07112 K07112; uncharacterized protein
D CLJ_B0340 conserved hypothetical protein K07118 K07118; uncharacterized protein
D CLJ_B2281 radical SAM domain protein K07129 K07129; uncharacterized protein
D CLJ_B3736 oxidoreductase, FAD-binding K07137 K07137; uncharacterized protein
D CLJ_B3956 pyridine nucleotide-disulphide oxidoreductase family protein K07137 K07137; uncharacterized protein
D CLJ_B3885 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D CLJ_B3190 conserved hypothetical protein K07164 K07164; uncharacterized protein
D CLJ_B3985 conserved hypothetical protein TIGR00278 K08998 K08998; uncharacterized protein
D CLJ_B3209 GatB/Yqey domain protein K09117 K09117; uncharacterized protein
D CLJ_B0017 putative membrane protein K09118 K09118; uncharacterized protein
D CLJ_B0731 conserved hypothetical protein K09155 K09155; uncharacterized protein
D CLJ_B1025 conserved hypothetical protein K09702 K09702; uncharacterized protein
D CLJ_B0799 conserved hypothetical protein K09705 K09705; uncharacterized protein
D CLJ_B2980 conserved hypothetical protein K09749 K09749; uncharacterized protein
D CLJ_B3168 conserved hypothetical protein K09764 K09764; uncharacterized protein
D CLJ_B0229 conserved hypothetical protein K09766 K09766; uncharacterized protein
D CLJ_B3558 YaiI/YqxD family protein K09768 K09768; uncharacterized protein
D CLJ_B0613 conserved hypothetical protein K09770 K09770; uncharacterized protein
D CLJ_B0491 conserved hypothetical protein K09779 K09779; uncharacterized protein
D CLJ_B2621 conserved hypothetical protein K09779 K09779; uncharacterized protein
D CLJ_B2675 helix-turn-helix protein, YlxM/p13 family K09787 K09787; uncharacterized protein
D CLJ_B1959 RNA-binding protein K00243 K00243; uncharacterized protein
D CLJ_B2844 conserved hypothetical protein K09931 K09931; uncharacterized protein
D CLJ_B1466 conserved hypothetical protein K09957 K09957; uncharacterized protein
D CLJ_B3640 conserved hypothetical protein K09963 K09963; uncharacterized protein
D CLJ_B1463 outer surface protein K09963 K09963; uncharacterized protein
D CLJ_B1260 conserved hypothetical protein K05967 K05967; uncharacterized protein
D CLJ_B1159 conserved hypothetical protein K01163 K01163; uncharacterized protein
D CLJ_B3245 conserved hypothetical protein K07584 ysxB; uncharacterized protein
D CLJ_B2645 conserved hypothetical protein K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 5, 2024