+D GENES KO #

  KEGG Orthology (KO) - Corynebacterium pseudotuberculosis 1002

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cpk00010] D CP1002_10395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_06005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_09920 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CP1002_08715 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CP1002_09425 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CP1002_03735 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CP1002_07570 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CP1002_07560 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CP1002_09650 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CP1002_07565 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CP1002_01325 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CP1002_09550 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CP1002_06340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CP1002_05595 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_01545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CP1002_03085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CP1002_03595 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CP1002_09085 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CP1002_04630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CP1002_07045 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CP1002_10450 aldose epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D CP1002_03330 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CP1002_00645 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:cpk00020] D CP1002_10090 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CP1002_07710 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CP1002_02320 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CP1002_09125 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_04500 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CP1002_01250 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CP1002_01255 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CP1002_01245 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CP1002_09430 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CP1002_05115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CP1002_06615 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CP1002_02405 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CP1002_03330 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CP1002_05595 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] C 00030 Pentose phosphate pathway [PATH:cpk00030] D CP1002_09920 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CP1002_07595 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CP1002_07585 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CP1002_08070 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CP1002_07510 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CP1002_07605 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CP1002_07600 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CP1002_05055 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CP1002_00845 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CP1002_01275 aminotransferase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CP1002_02450 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CP1002_04630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CP1002_09595 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CP1002_00725 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CP1002_03735 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CP1002_09425 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CP1002_08715 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:cpk00040] D CP1002_03395 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CP1002_09775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CP1002_07510 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:cpk00051] D CP1002_02570 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CP1002_00850 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CP1002_02390 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CP1002_02560 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CP1002_02535 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CP1002_08715 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CP1002_09425 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CP1002_06915 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CP1002_03735 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CP1002_07570 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CP1002_05055 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CP1002_06910 PTS transporter subunit EIIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CP1002_06480 PTS transporter subunit EIIA K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:cpk00052] D CP1002_09085 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CP1002_05660 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CP1002_09065 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CP1002_09070 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CP1002_06995 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CP1002_09775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CP1002_04630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CP1002_10395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_06005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_03205 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CP1002_08715 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CP1002_09185 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CP1002_00240 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] C 00053 Ascorbate and aldarate metabolism [PATH:cpk00053] D CP1002_03395 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CP1002_00415 PTS transporter subunit EIIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CP1002_00420 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component C 00500 Starch and sucrose metabolism [PATH:cpk00500] D CP1002_09185 glycoside hydrolase family 32 protein K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CP1002_00240 DUF3459 domain-containing protein K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CP1002_09775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CP1002_09170 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CP1002_08825 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CP1002_06350 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CP1002_09600 pulA; type I pullulanase K01200 pulA; pullulanase [EC:3.2.1.41] D CP1002_05405 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CP1002_08820 alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16] D CP1002_09175 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CP1002_00645 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CP1002_06250 glgX; glycogen debranching protein GlgX K01214 ISA; isoamylase [EC:3.2.1.68] D CP1002_04265 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CP1002_04255 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D CP1002_04630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CP1002_10395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_06005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_09920 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cpk00520] D CP1002_03370 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CP1002_00645 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CP1002_00640 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CP1002_10385 amidohydrolase family protein K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CP1002_10380 nagB; glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CP1002_05535 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CP1002_02065 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CP1002_09590 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CP1002_04585 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CP1002_01310 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CP1002_10390 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D CP1002_10395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_06005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_07045 ROK family protein K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63] D CP1002_04630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CP1002_09775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CP1002_03395 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CP1002_05660 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CP1002_09065 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CP1002_09070 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CP1002_06995 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CP1002_03205 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CP1002_09920 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CP1002_02570 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CP1002_00850 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CP1002_02390 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CP1002_02560 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CP1002_02535 NDP-sugar synthase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CP1002_09170 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cpk00620] D CP1002_05595 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_01295 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CP1002_03595 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CP1002_03875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CP1002_03870 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CP1002_06340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CP1002_02420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CP1002_06420 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CP1002_04500 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CP1002_01545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CP1002_03085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CP1002_04295 pyruvate dehydrogenase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D CP1002_07280 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CP1002_02405 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1] D CP1002_05115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CP1002_06615 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CP1002_09430 class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CP1002_07575 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CP1002_03330 phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CP1002_00825 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cpk00630] D CP1002_05115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CP1002_10090 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CP1002_07710 acnA; aconitate hydratase AcnA K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CP1002_08840 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D CP1002_02420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CP1002_02465 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CP1002_02470 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CP1002_02460 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit D CP1002_07760 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D CP1002_07765 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D CP1002_00900 catalase K03781 katE; catalase [EC:1.11.1.6] D CP1002_05625 HAD-IA family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CP1002_05680 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_05865 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_09475 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CP1002_05905 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CP1002_05900 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_05895 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D CP1002_06375 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CP1002_09125 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] C 00640 Propanoate metabolism [PATH:cpk00640] D CP1002_03875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CP1002_03870 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_01295 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CP1002_04930 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D CP1002_02420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CP1002_02860 methylmalonyl-CoA carboxytransferase subunit 5S K03416 E2.1.3.1-5S; methylmalonyl-CoA carboxyltransferase 5S subunit [EC:2.1.3.1] D CP1002_02865 acyl-CoA carboxylase subunit beta K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1] D CP1002_02870 hypothetical protein K17489 E2.1.3.1-12S; methylmalonyl-CoA carboxyltransferase 12S subunit [EC:2.1.3.1] D CP1002_02875 biotin/lipoyl-binding protein K17490 E2.1.3.1-1.3S; methylmalonyl-CoA carboxyltransferase 1.3S subunit [EC:2.1.3.1] D CP1002_02465 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CP1002_02470 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CP1002_02460 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit D CP1002_08840 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D CP1002_07760 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D CP1002_07765 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D CP1002_01545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CP1002_03085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] C 00650 Butanoate metabolism [PATH:cpk00650] D CP1002_01250 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CP1002_01255 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CP1002_01245 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CP1002_09915 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CP1002_03380 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CP1002_04500 acetyl-CoA hydrolase/transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D CP1002_01295 pflB; formate C-acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CP1002_08660 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CP1002_09180 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] C 00660 C5-Branched dibasic acid metabolism [PATH:cpk00660] D CP1002_08660 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CP1002_09180 budA; acetolactate decarboxylase K01575 alsD; acetolactate decarboxylase [EC:4.1.1.5] D CP1002_07290 CoA transferase K18289 ict-P; itaconate CoA-transferase [EC:2.8.3.- 2.8.3.22] D CP1002_07295 MaoC family dehydratase K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56] D CP1002_07300 CoA ester lyase K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25] D CP1002_08565 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CP1002_08560 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CP1002_08630 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cpk00562] D CP1002_06310 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CP1002_00340 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CP1002_07570 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cpk00190] D CP1002_08050 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CP1002_01250 fumarate reductase/succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CP1002_01255 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CP1002_01245 succinate dehydrogenase cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CP1002_05980 ubiquinol-cytochrome c reductase iron-sulfur subunit K03890 qcrA; quinol---cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CP1002_05985 cytochrome bc complex cytochrome b subunit K03891 qcrB; quinol---cytochrome-c reductase cytochrome b subunit [EC:7.1.1.8] D CP1002_05975 c-type cytochrome K03889 qcrC; quinol---cytochrome-c reductase cytochrome c subunit [EC:7.1.1.8] D CP1002_07610 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CP1002_05965 cytochrome-c oxidase K27109 ctaF; cytochrome c oxidase subunit IV [EC:7.1.1.9] D CP1002_05970 heme-copper oxidase subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D CP1002_04735 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D CP1002_05960 cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D CP1002_07615 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CP1002_04520 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CP1002_04515 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CP1002_08875 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CP1002_08865 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CP1002_08870 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CP1002_08880 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CP1002_08860 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CP1002_08895 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CP1002_08885 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CP1002_08890 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CP1002_04050 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CP1002_09680 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CP1002_04015 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cpk00680] D CP1002_09475 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CP1002_09550 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CP1002_07575 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CP1002_05115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CP1002_03735 fbaA; class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CP1002_09425 glpX; class II fructose-bisphosphatase K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CP1002_08715 6-phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D CP1002_03875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CP1002_03870 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CP1002_01325 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CP1002_08635 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CP1002_10095 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CP1002_04755 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:cpk00910] D CP1002_03800 ammonia-forming cytochrome c nitrite reductase subunit c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D CP1002_03795 nrfH; cytochrome c nitrite reductase small subunit K15876 nrfH; cytochrome c nitrite reductase small subunit D CP1002_02820 multicopper oxidase domain-containing protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1] D CP1002_00655 nitric-oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D CP1002_09620 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D CP1002_06380 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CP1002_05680 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_05865 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_04195 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D CP1002_02935 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cpk00920] D CP1002_07310 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CP1002_06890 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CP1002_09945 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CP1002_06700 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] D CP1002_03710 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CP1002_02425 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CP1002_04560 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CP1002_04565 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cpk00061] D CP1002_02420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CP1002_05585 acyl carrier protein K02078 acpP; acyl carrier protein D CP1002_04860 type I polyketide synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CP1002_05410 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CP1002_01315 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cpk00071] D CP1002_05410 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CP1002_01315 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CP1002_03595 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cpk00561] D CP1002_06375 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CP1002_07800 dhaK; dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D CP1002_07805 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D CP1002_07810 HPr family phosphocarrier protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CP1002_00475 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D CP1002_08295 HAD-IIA family hydrolase K06117 E3.1.3.21; glycerol-1-phosphatase [EC:3.1.3.21] D CP1002_06010 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CP1002_03255 esterase family protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CP1002_04310 esterase family protein K18851 fbp; diacylglycerol O-acyltransferase / trehalose O-mycolyltransferase [EC:2.3.1.20 2.3.1.122] D CP1002_00350 triacylglycerol lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] D CP1002_04335 alpha/beta fold hydrolase K01046 lip; triacylglycerol lipase [EC:3.1.1.3] C 00564 Glycerophospholipid metabolism [PATH:cpk00564] D CP1002_08550 NAD(P)-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CP1002_03705 glycerol-3-phosphate dehydrogenase/oxidase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CP1002_06010 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CP1002_03215 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CP1002_03105 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CP1002_06550 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CP1002_06785 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CP1002_07175 CDP-alcohol phosphatidyltransferase family protein K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CP1002_03910 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism [PATH:cpk00600] D CP1002_01970 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids [PATH:cpk01040] D CP1002_02645 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D CP1002_02640 ferredoxin reductase K22770 K22770; stearoyl-CoA 9-desaturase NADPH oxidoreductase D CP1002_07210 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cpk00230] D CP1002_04630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CP1002_09595 ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CP1002_04420 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CP1002_04345 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CP1002_09890 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CP1002_03850 ATP-grasp domain-containing protein K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D CP1002_04395 purL; phosphoribosylformylglycinamidine synthase subunit PurL K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D CP1002_04385 purS; phosphoribosylformylglycinamidine synthase subunit PurS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D CP1002_04390 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CP1002_04425 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CP1002_02485 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CP1002_02490 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CP1002_04365 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CP1002_04360 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CP1002_09885 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CP1002_07255 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CP1002_05580 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CP1002_00835 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CP1002_06140 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CP1002_04160 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CP1002_04065 hpt; hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CP1002_02155 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CP1002_02160 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CP1002_05140 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CP1002_04805 rdgB; RdgB/HAM1 family non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CP1002_07700 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CP1002_02170 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CP1002_05725 GuaB1 family IMP dehydrogenase-related protein K26110 guaB1; GMP reductase [EC:1.7.1.7] D CP1002_07470 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CP1002_04715 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CP1002_04405 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CP1002_04725 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CP1002_01710 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CP1002_05520 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D CP1002_07260 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CP1002_01345 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CP1002_09535 Ppx/GppA family phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CP1002_01170 HAMP domain-containing protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D CP1002_03790 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CP1002_02360 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D CP1002_00325 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CP1002_01960 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CP1002_07170 HIT domain-containing protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D CP1002_03450 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CP1002_03445 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CP1002_03440 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:cpk00240] D CP1002_07450 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CP1002_07445 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CP1002_07435 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CP1002_07440 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CP1002_07830 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CP1002_03720 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CP1002_07455 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CP1002_06540 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CP1002_05140 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CP1002_02445 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CP1002_08215 (d)CMP kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CP1002_05580 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CP1002_04160 nucleoside hydrolase K25589 inuH; inosine/uridine nucleosidase [EC:3.2.2.2 3.2.2.3] D CP1002_02380 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CP1002_07430 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CP1002_03095 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D CP1002_01710 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CP1002_03390 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CP1002_04715 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CP1002_04405 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CP1002_04725 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CP1002_02590 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CP1002_07065 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CP1002_03090 thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D CP1002_09950 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CP1002_06750 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cpk00250] D CP1002_06175 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CP1002_01875 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CP1002_05955 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CP1002_03425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CP1002_06385 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CP1002_07885 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CP1002_08340 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CP1002_08335 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CP1002_03790 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CP1002_04360 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CP1002_07435 aspartate carbamoyltransferase catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CP1002_09915 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CP1002_03380 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CP1002_06380 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CP1002_05680 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_05865 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_07450 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CP1002_07445 carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CP1002_04390 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CP1002_05535 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CP1002_04420 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cpk00260] D CP1002_00880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CP1002_00890 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CP1002_08945 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CP1002_08940 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CP1002_05705 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CP1002_09475 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CP1002_06375 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CP1002_01325 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CP1002_08635 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CP1002_10095 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CP1002_04755 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CP1002_05905 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CP1002_05900 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_05895 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein D CP1002_04115 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D CP1002_04125 aldehyde dehydrogenase family protein K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D CP1002_10020 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D CP1002_07305 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CP1002_01870 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CP1002_06215 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CP1002_10525 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CP1002_10520 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cpk00270] D CP1002_04560 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CP1002_04565 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CP1002_10020 cysteine synthase family protein K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22] D CP1002_07860 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CP1002_07485 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CP1002_06140 pgeF; peptidoglycan editing factor PgeF K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CP1002_02585 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CP1002_00880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CP1002_00890 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CP1002_08945 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CP1002_05925 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CP1002_03710 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CP1002_02425 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CP1002_01545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CP1002_03085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CP1002_05115 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CP1002_07305 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CP1002_01870 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CP1002_08635 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CP1002_10095 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:cpk00280] D CP1002_05925 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_02420 acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha K11263 bccA; acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:6.4.1.2 6.4.1.3 6.3.4.14] D CP1002_02465 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CP1002_02470 acyl-CoA carboxylase subunit beta K27094 accD5; propionyl-/long chain acyl-CoA carboxylase carboxyl transferase subunit beta 5 [EC:6.4.1.3 6.4.1.- 2.1.3.15] D CP1002_02460 acyl-CoA carboxylase subunit epsilon K27095 accE5; acyl-CoA carboxylase epsilon subunit D CP1002_08840 mce; methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1] D CP1002_07760 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D CP1002_07765 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D CP1002_00780 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] D CP1002_01435 NAD(P)-dependent oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cpk00290] D CP1002_06215 ilvA; threonine ammonia-lyase IlvA K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CP1002_08565 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CP1002_08560 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CP1002_08630 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CP1002_08660 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CP1002_08655 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CP1002_05925 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CP1002_03425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CP1002_00825 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cpk00300] D CP1002_08945 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D CP1002_00880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CP1002_00890 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CP1002_06755 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CP1002_04910 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CP1002_10425 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CP1002_06745 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CP1002_09225 succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CP1002_09235 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CP1002_08355 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CP1002_09220 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CP1002_06865 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CP1002_10015 ornithine decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CP1002_08950 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CP1002_06095 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CP1002_06100 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cpk00310] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_09915 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CP1002_03380 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00220 Arginine biosynthesis [PATH:cpk00220] D CP1002_08350 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CP1002_08340 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CP1002_08335 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CP1002_03450 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CP1002_03445 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CP1002_03440 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D CP1002_04390 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CP1002_05680 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_05865 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_06380 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CP1002_03425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CP1002_08365 argJ; bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D CP1002_03920 GNAT family N-acetyltransferase K22476 K22476; N-acetylglutamate synthase [EC:2.3.1.1] D CP1002_08360 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CP1002_08370 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CP1002_08355 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:cpk00330] D CP1002_01355 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CP1002_05170 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CP1002_05190 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D CP1002_09640 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 00340 Histidine metabolism [PATH:cpk00340] D CP1002_07875 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CP1002_07870 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D CP1002_06320 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D CP1002_06305 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CP1002_06300 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CP1002_06315 hisF; imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CP1002_06285 hisB; imidazoleglycerol-phosphate dehydratase HisB K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D CP1002_06280 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_05630 threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_00615 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_02885 hisN; histidinol-phosphatase K05602 hisN; histidinol-phosphatase [EC:3.1.3.15] D CP1002_06275 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:cpk00350] D CP1002_06280 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_05630 threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_00615 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_03595 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CP1002_09915 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CP1002_03380 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CP1002_00795 fumarylacetoacetate hydrolase family protein K16164 K16164; acylpyruvate hydrolase [EC:3.7.1.5] C 00360 Phenylalanine metabolism D CP1002_06280 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_05630 threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_00615 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism [PATH:cpk00380] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_00900 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cpk00400] D CP1002_06025 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CP1002_07390 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CP1002_07395 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D CP1002_07385 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CP1002_02655 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CP1002_07380 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CP1002_10500 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CP1002_10505 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CP1002_10510 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D CP1002_06305 priA; bifunctional 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase/phosphoribosylanthranilate isomerase PriA K24017 priA; phosphoribosyl isomerase A [EC:5.3.1.16 5.3.1.24] D CP1002_06330 trpC; indole-3-glycerol phosphate synthase TrpC K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D CP1002_10515 trpCF; bifunctional indole-3-glycerol-phosphate synthase TrpC/phosphoribosylanthranilate isomerase TrpF K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D CP1002_10525 trpA; tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CP1002_10520 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CP1002_09910 chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5] D CP1002_00685 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CP1002_06280 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_05630 threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_00615 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism D CP1002_04110 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:cpk00430] D CP1002_06385 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D CP1002_03870 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CP1002_03875 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:cpk00450] D CP1002_07860 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CP1002_07655 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CP1002_10585 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CP1002_09720 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cpk00460] D CP1002_06175 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CP1002_01875 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CP1002_09475 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cpk00470] D CP1002_02090 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CP1002_08545 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CP1002_04390 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D CP1002_04790 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CP1002_06110 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CP1002_06865 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CP1002_10015 ornithine decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CP1002_08950 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:cpk00480] D CP1002_03940 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D CP1002_05920 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CP1002_02320 NADP-dependent isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CP1002_08070 gndA; NADP-dependent phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CP1002_07595 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CP1002_04380 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis [PATH:cpk00515] D CP1002_09745 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00514 Other types of O-glycan biosynthesis [PATH:cpk00514] D CP1002_09745 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:cpk00511] D CP1002_01970 exo-alpha-sialidase K01186 NEU1; sialidase-1 [EC:3.2.1.18] C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis [PATH:cpk00542] D CP1002_08905 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cpk00541] D CP1002_09775 UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CP1002_06995 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CP1002_03205 glf; UDP-galactopyranose mutase K01854 glf; UDP-galactopyranose mutase [EC:5.4.99.9] D CP1002_03395 UDP-glucose/GDP-mannose dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CP1002_01200 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CP1002_01210 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CP1002_01205 rfbD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] D CP1002_02570 manA; mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CP1002_00850 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CP1002_02390 phospho-sugar mutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CP1002_02560 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CP1002_09590 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:cpk00550] D CP1002_04585 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CP1002_01310 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CP1002_06125 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CP1002_06110 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CP1002_06095 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CP1002_08545 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CP1002_06100 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CP1002_05470 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CP1002_07845 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CP1002_06105 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CP1002_06120 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CP1002_06090 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CP1002_00175 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D CP1002_02355 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CP1002_04055 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CP1002_00810 DUF1727 domain-containing protein K23393 murT; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] D CP1002_00805 glutamine amidotransferase K07009 gatD; lipid II isoglutaminyl synthase (glutamine-hydrolysing) [EC:6.3.5.13] C 00552 Teichoic acid biosynthesis [PATH:cpk00552] D CP1002_07845 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CP1002_08905 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cpk00543] D CP1002_08905 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CP1002_04560 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cpk00730] D CP1002_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CP1002_07085 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CP1002_08535 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CP1002_02650 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CP1002_01960 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cpk00740] D CP1002_07525 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CP1002_07515 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CP1002_07530 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CP1002_07520 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CP1002_06725 bifunctional riboflavin kinase/FAD synthetase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CP1002_07310 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CP1002_06890 FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CP1002_00355 dehydrogenase K19286 nfrA2; FMN reductase [NAD(P)H] [EC:1.5.1.39] C 00750 Vitamin B6 metabolism [PATH:cpk00750] D CP1002_05455 pdxY; pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CP1002_10095 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CP1002_05705 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CP1002_00675 pdxS; pyridoxal 5'-phosphate synthase lyase subunit PdxS K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D CP1002_00680 pdxT; pyridoxal 5'-phosphate synthase glutaminase subunit PdxT K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:cpk00760] D CP1002_04770 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CP1002_00835 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CP1002_05580 HAD family hydrolase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CP1002_05195 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CP1002_02735 NUDIX domain-containing protein K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CP1002_04695 nadE; ammonia-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D CP1002_06790 nicotinamide-nucleotide amidohydrolase family protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CP1002_04890 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CP1002_08285 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CP1002_09915 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CP1002_03380 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:cpk00770] D CP1002_08660 ilvN; acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CP1002_08655 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CP1002_09350 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CP1002_04110 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CP1002_09480 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CP1002_07480 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CP1002_08505 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CP1002_08445 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CP1002_04865 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CP1002_05925 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00780 Biotin metabolism [PATH:cpk00780] D CP1002_07200 6-carboxyhexanoate--CoA ligase K01906 bioW; 6-carboxyhexanoate--CoA ligase [EC:6.2.1.14] D CP1002_07195 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CP1002_08235 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CP1002_08245 AAA family ATPase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CP1002_08230 bioD; ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CP1002_08580 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D CP1002_00310 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6] D CP1002_02475 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:cpk00785] D CP1002_05885 lipB; lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CP1002_05880 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_05595 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CP1002_09125 multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit K01616 kgd; multifunctional 2-oxoglutarate metabolism enzyme [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61] D CP1002_05905 gcvP; aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CP1002_05900 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CP1002_05895 gcvH; glycine cleavage system protein GcvH K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cpk00790] D CP1002_04075 folE; GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CP1002_04085 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CP1002_04090 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CP1002_04080 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CP1002_09210 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CP1002_09955 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CP1002_05125 bifunctional folylpolyglutamate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CP1002_07525 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CP1002_05100 pabB; aminodeoxychorismate synthase component I K13950 pabAB; para-aminobenzoate synthetase [EC:2.6.1.85] D CP1002_04440 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CP1002_09770 molybdopterin molybdotransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] C 00670 One carbon pool by folate [PATH:cpk00670] D CP1002_09955 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CP1002_07890 formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3] D CP1002_02265 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CP1002_09475 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CP1002_09890 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CP1002_09885 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CP1002_07500 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CP1002_05900 gcvT; glycine cleavage system aminomethyltransferase GcvT K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CP1002_07860 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CP1002_09950 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CP1002_06750 FAD-dependent thymidylate synthase K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D CP1002_06050 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CP1002_09780 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cpk00860] D CP1002_00715 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_08600 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_01395 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CP1002_01440 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CP1002_01410 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CP1002_01400 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CP1002_01425 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CP1002_01430 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CP1002_07725 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CP1002_07100 chlorite dismutase family protein K00435 hemQ; hydrogen peroxide-dependent heme synthase [EC:1.3.98.5] D CP1002_01405 bifunctional uroporphyrinogen-III C-methyltransferase/uroporphyrinogen-III synthase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75] D CP1002_06655 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CP1002_08440 radical SAM/SPASM domain-containing protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D CP1002_07610 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CP1002_07615 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CP1002_07985 cobJ; precorrin-3B C(17)-methyltransferase K13540 cobIJ; precorrin-2 C20-methyltransferase / precorrin-3B C17-methyltransferase [EC:2.1.1.130 2.1.1.131] D CP1002_07995 precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83] D CP1002_07975 cobM; precorrin-4 C(11)-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D CP1002_09965 cobF; precorrin-6A synthase (deacetylating) K02228 cobF; precorrin-6A synthase [EC:2.1.1.152] D CP1002_07980 cobalt-precorrin-6A reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D CP1002_07970 bifunctional cobalt-precorrin-7 (C(5))-methyltransferase/cobalt-precorrin-6B (C(15))-methyltransferase K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D CP1002_07990 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D CP1002_06635 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D CP1002_08000 cobN; cobaltochelatase subunit CobN K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D CP1002_04580 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CP1002_06630 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CP1002_06595 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D CP1002_05610 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D CP1002_05940 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D CP1002_05930 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D CP1002_05935 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CP1002_05645 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CP1002_06620 AAA domain-containing protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] D CP1002_05690 biliverdin-producing heme oxygenase K21480 HO; heme oxygenase (biliverdin-producing, ferredoxin) [EC:1.14.15.20] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cpk00130] D CP1002_01540 demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CP1002_08605 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] D CP1002_01525 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D CP1002_01520 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D CP1002_01505 o-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D CP1002_01510 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D CP1002_08065 PaaI family thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D CP1002_01500 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cpk00900] D CP1002_07085 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CP1002_06570 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CP1002_04225 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CP1002_09700 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CP1002_04230 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CP1002_06580 ispG; flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CP1002_09405 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CP1002_05380 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D CP1002_06045 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CP1002_09490 isoprenyl transferase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CP1002_05470 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:cpk00906] D CP1002_10485 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CP1002_07605 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cpk00523] D CP1002_01200 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CP1002_01210 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CP1002_01205 rfbD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides D CP1002_08605 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2] C 01055 Biosynthesis of vancomycin group antibiotics D CP1002_01210 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:cpk00332] D CP1002_05170 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CP1002_05190 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cpk00261] D CP1002_00880 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CP1002_00890 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CP1002_06755 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CP1002_04910 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CP1002_10425 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CP1002_06745 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cpk00521] D CP1002_10395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_06005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_04630 alpha-D-glucose phosphate-specific phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CP1002_00340 inositol-3-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D CP1002_06310 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CP1002_01200 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CP1002_01210 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CP1002_01205 rfbD; dTDP-4-dehydrorhamnose reductase K23987 rfbCD; dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CP1002_10395 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] D CP1002_06005 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cpk00525] D CP1002_01200 rfbA; glucose-1-phosphate thymidylyltransferase RfbA K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CP1002_01210 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cpk00401] D CP1002_00685 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D CP1002_06280 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_05630 threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_00615 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CP1002_10500 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CP1002_10505 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CP1002_05585 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CP1002_07485 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D CP1002_06420 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation [PATH:cpk00625] D CP1002_03595 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:cpk00633] D CP1002_01610 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation D CP1002_03450 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CP1002_03445 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CP1002_03440 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation [PATH:cpk00626] D CP1002_03595 adhP; alcohol dehydrogenase AdhP K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cpk03020] D CP1002_01660 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CP1002_01665 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CP1002_02000 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CP1002_07475 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors D CP1002_10150 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cpk03010] D CP1002_08455 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CP1002_06530 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CP1002_01810 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CP1002_01995 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CP1002_01900 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CP1002_10255 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CP1002_01725 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CP1002_01885 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CP1002_02060 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CP1002_01775 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CP1002_01990 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CP1002_01720 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CP1002_01985 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CP1002_09840 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CP1002_06735 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CP1002_06455 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CP1002_01825 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CP1002_09845 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CP1002_01800 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CP1002_05240 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CP1002_01595 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CP1002_01795 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CP1002_01780 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CP1002_01785 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CP1002_01860 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CP1002_01890 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CP1002_01620 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CP1002_10245 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CP1002_01615 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CP1002_01590 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CP1002_02055 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CP1002_01850 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CP1002_01910 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CP1002_01815 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CP1002_02005 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CP1002_01895 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CP1002_06490 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CP1002_08395 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CP1002_05155 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CP1002_01805 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CP1002_01790 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CP1002_01855 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CP1002_09605 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D CP1002_05160 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CP1002_09830 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CP1002_01820 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CP1002_01905 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CP1002_09825 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CP1002_09820 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CP1002_09835 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CP1002_10635 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CP1002_08400 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CP1002_04700 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CP1002_02965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_10175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_08315 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_04595 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_02970 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_04600 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_10170 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_08310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_02975 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_10165 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_08305 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_04605 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cpk00970] D CP1002_00065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CP1002_00080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CP1002_04645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CP1002_00625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_00660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_09975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_08980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_04940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_05555 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CP1002_04535 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CP1002_04545 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CP1002_07130 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CP1002_08590 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CP1002_08585 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CP1002_04530 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CP1002_07120 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CP1002_07135 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CP1002_03385 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CP1002_05075 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CP1002_04915 tRNA-His K14226 tRNA-His; tRNA His D CP1002_00060 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CP1002_00200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_08470 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_07795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_04820 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_09530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_04900 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CP1002_04525 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CP1002_02780 tRNA-Met K14230 tRNA-Met; tRNA Met D CP1002_01570 tRNA-Met K14230 tRNA-Met; tRNA Met D CP1002_05560 tRNA-Ile K14230 tRNA-Met; tRNA Met D CP1002_04550 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CP1002_01020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CP1002_08135 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CP1002_05080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CP1002_00610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CP1002_00620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CP1002_00700 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CP1002_00740 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CP1002_01180 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CP1002_01565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CP1002_04280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CP1002_01575 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CP1002_01560 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CP1002_07125 tRNA-Val K14237 tRNA-Val; tRNA Val D CP1002_07140 tRNA-Val K14237 tRNA-Val; tRNA Val D CP1002_05605 tRNA-Val K14237 tRNA-Val; tRNA Val D CP1002_00715 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_08600 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_08750 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CP1002_08710 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CP1002_08755 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CP1002_07355 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CP1002_07340 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CP1002_05495 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CP1002_07165 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CP1002_03170 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CP1002_04235 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CP1002_09720 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CP1002_07500 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CP1002_05120 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CP1002_10340 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CP1002_06165 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CP1002_04145 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CP1002_03415 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CP1002_08955 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CP1002_06665 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CP1002_07285 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CP1002_08380 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CP1002_08375 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CP1002_08325 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CP1002_02345 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cpk03060] D CP1002_01955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CP1002_01580 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CP1002_07580 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CP1002_07240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CP1002_07245 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CP1002_07235 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CP1002_03005 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CP1002_10620 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CP1002_08120 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CP1002_02620 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CP1002_06450 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CP1002_00745 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CP1002_06435 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CP1002_07945 Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CP1002_09150 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CP1002_07950 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CP1002_06495 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CP1002_06190 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cpk04122] D CP1002_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CP1002_03710 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CP1002_02425 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CP1002_08780 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome D CP1002_07915 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase C 03018 RNA degradation [PATH:cpk03018] D CP1002_05150 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D CP1002_09550 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CP1002_06740 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CP1002_09060 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CP1002_08925 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CP1002_06760 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D CP1002_03560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CP1002_04000 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_02130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_09680 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CP1002_04015 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CP1002_10560 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cpk03030] D CP1002_06245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08620 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_00815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08770 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_06210 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CP1002_00760 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CP1002_01175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CP1002_05225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CP1002_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CP1002_10230 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CP1002_05540 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CP1002_05010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_10250 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_05645 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CP1002_06500 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CP1002_08465 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CP1002_08765 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cpk03410] D CP1002_01070 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CP1002_08530 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CP1002_04190 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CP1002_06410 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CP1002_10320 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CP1002_09930 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CP1002_00435 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CP1002_09935 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CP1002_03915 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CP1002_02335 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CP1002_08465 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CP1002_08765 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cpk03420] D CP1002_09570 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CP1002_08410 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D CP1002_08435 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D CP1002_07540 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D CP1002_09905 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CP1002_02725 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CP1002_02740 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CP1002_08465 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CP1002_08765 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CP1002_10150 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] C 03430 Mismatch repair [PATH:cpk03430] D CP1002_09905 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CP1002_02725 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CP1002_02740 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CP1002_09410 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CP1002_09415 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CP1002_05010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_10250 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_06210 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CP1002_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CP1002_00760 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CP1002_05225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CP1002_01175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CP1002_06245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08620 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_00815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08770 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08765 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:cpk03440] D CP1002_05010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_10250 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D CP1002_05465 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CP1002_00770 recR; recombination protein RecR K06187 recR; recombination protein RecR D CP1002_06825 recA; recombinase RecA K03553 recA; recombination protein RecA D CP1002_08465 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CP1002_07225 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CP1002_07230 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CP1002_07220 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CP1002_08520 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CP1002_06210 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CP1002_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CP1002_00760 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CP1002_05225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CP1002_01175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CP1002_06245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08620 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_00815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08770 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_07490 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:cpk03250] D CP1002_00110 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cpk02010] D CP1002_00940 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CP1002_00935 transporter K02011 afuB; iron(III) transport system permease protein D CP1002_00930 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CP1002_00505 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CP1002_00285 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein D CP1002_00290 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CP1002_00295 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CP1002_01950 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CP1002_01920 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D CP1002_01925 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CP1002_01930 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CP1002_02515 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D CP1002_02510 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D CP1002_02505 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D CP1002_04465 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CP1002_04470 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CP1002_04480 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CP1002_09875 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D CP1002_09870 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein D CP1002_09865 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein D CP1002_09880 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CP1002_02215 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CP1002_02220 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CP1002_02205 ABC transporter permease K02072 metI; D-methionine transport system permease protein D CP1002_02210 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CP1002_09320 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CP1002_09310 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D CP1002_09305 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CP1002_01830 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D CP1002_01845 ABC transporter permease K13890 gsiC; glutathione transport system permease protein D CP1002_01840 ABC transporter permease K13891 gsiD; glutathione transport system permease protein D CP1002_01835 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D CP1002_00155 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CP1002_00150 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein D CP1002_00145 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein D CP1002_00140 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CP1002_00580 zinc ABC transporter solute-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CP1002_00570 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D CP1002_00575 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D CP1002_00565 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CP1002_06815 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D CP1002_06805 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D CP1002_06810 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CP1002_09335 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D CP1002_00595 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D CP1002_00590 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CP1002_10350 ABC transporter permease K09813 hrtB; hemin transport system permease protein D CP1002_10345 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CP1002_02920 ABC transporter permease K09811 ftsX; cell division transport system permease protein D CP1002_02915 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CP1002_04505 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CP1002_04510 ATP-binding cassette domain-containing protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD C 02060 Phosphotransferase system (PTS) [PATH:cpk02060] D CP1002_06925 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CP1002_06900 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D CP1002_00645 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CP1002_00640 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CP1002_08450 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CP1002_06480 PTS transporter subunit EIIA K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191] D CP1002_00415 PTS transporter subunit EIIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CP1002_00420 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CP1002_06910 PTS transporter subunit EIIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CP1002_06915 1-phosphofructokinase family hexose kinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] C 03070 Bacterial secretion system [PATH:cpk03070] D CP1002_07240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CP1002_07245 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CP1002_01580 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CP1002_07580 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CP1002_01955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CP1002_07235 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CP1002_03005 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CP1002_10620 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CP1002_08120 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CP1002_02620 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CP1002_06435 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CP1002_06450 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CP1002_07945 Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CP1002_09150 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CP1002_07950 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:cpk02020] D CP1002_00950 response regulator transcription factor K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CP1002_01330 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CP1002_01335 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CP1002_04465 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CP1002_07615 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CP1002_09810 HAMP domain-containing histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CP1002_09815 response regulator transcription factor K07669 mprA; two-component system, OmpR family, response regulator MprA D CP1002_09805 PDZ domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CP1002_02600 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CP1002_02595 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CP1002_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CP1002_08190 DUF2156 domain-containing protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] D CP1002_09860 CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D CP1002_08205 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CP1002_03055 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D CP1002_01120 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CP1002_01125 hypothetical protein K12510 tadB; tight adherence protein B D CP1002_06445 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D CP1002_06440 P-II family nitrogen regulator K04751 glnB; nitrogen regulatory protein P-II 1 D CP1002_05680 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_05865 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_04040 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D CP1002_01060 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CP1002_04520 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CP1002_04515 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CP1002_05620 low molecular weight phosphotyrosine protein phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cpk02024] D CP1002_10500 anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CP1002_10505 anthranilate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D CP1002_06025 3-deoxy-7-phosphoheptulonate synthase class II K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CP1002_05410 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CP1002_01315 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CP1002_01060 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CP1002_07515 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CP1002_05030 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CP1002_09320 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CP1002_09310 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D CP1002_09305 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CP1002_07250 peptide ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_05280 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_05325 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_10000 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_10405 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_05285 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_05320 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_09995 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_03525 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_10410 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_05315 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CP1002_09990 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CP1002_03530 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_10415 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_05260 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_05310 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_09985 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_03005 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CP1002_10620 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CP1002_04935 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-] D CP1002_01580 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CP1002_07580 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CP1002_01955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CP1002_07235 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CP1002_08120 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CP1002_02620 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CP1002_06435 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CP1002_06450 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis C 02040 Flagellar assembly D CP1002_07040 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CP1002_09550 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:cpk04980] D CP1002_04580 cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CP1002_07770 meaB; methylmalonyl Co-A mutase-associated GTPase MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D CP1002_07760 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D CP1002_07765 scpA; methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D CP1002_07860 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cpk01501] D CP1002_03370 glycoside hydrolase family 3 protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CP1002_09320 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CP1002_09310 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D CP1002_09305 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CP1002_06090 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:cpk01502] D CP1002_08545 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CP1002_02090 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CP1002_06100 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CP1002_06105 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CP1002_06120 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cpk01503] D CP1002_10595 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CP1002_00110 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CP1002_08190 DUF2156 domain-containing protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cpk01000] C 01001 Protein kinases [BR:cpk01001] D CP1002_03880 serine/threonine protein kinase K14949 pknG; serine/threonine-protein kinase PknG [EC:2.7.11.1] D CP1002_00165 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CP1002_00170 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CP1002_06030 pknB; Stk1 family PASTA domain-containing Ser/Thr kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CP1002_01330 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CP1002_09810 HAMP domain-containing histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CP1002_02600 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CP1002_04330 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CP1002_00955 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cpk01009] D CP1002_02585 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CP1002_00185 serine/threonine-protein phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D CP1002_04755 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:cpk01002] D CP1002_06190 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D CP1002_07375 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CP1002_01605 C1 family peptidase K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40] D CP1002_07700 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CP1002_02170 guaA; glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CP1002_05995 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CP1002_07720 hydrolase K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CP1002_04420 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CP1002_05535 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CP1002_05955 asnB; asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CP1002_03545 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D CP1002_03675 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D CP1002_03685 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D CP1002_03010 class E sortase K07284 srtA; sortase A [EC:3.4.22.70] D CP1002_04150 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D CP1002_00205 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D CP1002_04825 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D CP1002_10440 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D CP1002_05390 M3 family metallopeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D CP1002_00490 peptidase M13 K07386 pepO; putative endopeptidase [EC:3.4.24.-] D CP1002_05920 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CP1002_09220 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CP1002_03995 dipeptidase K23980 tpdA; cysteinylglycine-S-conjugate dipeptidase [EC:3.4.13.23] D CP1002_06590 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CP1002_04070 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CP1002_00500 PrsW family intramembrane metalloprotease K24131 prsW; protease PrsW [EC:3.4.-.-] D CP1002_09805 PDZ domain-containing protein K08372 pepD; putative serine protease PepD [EC:3.4.21.-] D CP1002_04935 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-] D CP1002_02025 mycP; type VII secretion-associated serine protease mycosin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CP1002_01220 S9 family peptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26] D CP1002_04375 S9 family peptidase K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CP1002_02355 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CP1002_04055 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CP1002_05090 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CP1002_05095 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CP1002_02760 PDZ domain-containing protein K07177 K07177; Lon-like protease D CP1002_06940 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CP1002_06495 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CP1002_09640 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5] C 01003 Glycosyltransferases [BR:cpk01003] D CP1002_08015 polyprenol monophosphomannose synthase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83] D CP1002_09745 phospholipid carrier-dependent glycosyltransferase K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109] D CP1002_07185 glycosyltransferase family 4 protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D CP1002_06000 glycosyltransferase family 4 protein K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346] D CP1002_03945 DUF2029 domain-containing protein K13669 pimE; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CP1002_01535 glycosyltransferase family 1 protein K12583 mgtA; phosphatidylinositol alpha 1,6-mannosyltransferase [EC:2.4.1.-] D CP1002_09175 glgA; glycogen synthase K16148 glgM; alpha-maltose-1-phosphate synthase [EC:2.4.1.342] D CP1002_08905 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CP1002_03260 DUF2029 domain-containing protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CP1002_03045 DUF2029 domain-containing protein K13671 K13671; alpha-1,2-mannosyltransferase [EC:2.4.1.-] D CP1002_06040 alpha-(1->6)-mannopyranosyltransferase A K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CP1002_07630 alpha 1,6 mannopyranosyltransferase K14339 mptB; alpha-1,6-mannosyltransferase [EC:2.4.1.-] D CP1002_00510 arabinosyltransferase K11387 embC; arabinosyltransferase C [EC:2.4.2.-] D CP1002_00515 hypothetical protein K13686 aftA; galactan 5-O-arabinofuranosyltransferase [EC:2.4.2.46] D CP1002_03250 arabinofuranosyl transferase C K13687 aftB; arabinofuranosyltransferase [EC:2.4.2.-] D CP1002_07110 DUF2029 domain-containing protein K16647 aftC; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.47] D CP1002_03360 DUF3367 domain-containing protein K16648 aftD; arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-] D CP1002_00555 glycosyltransferase family 2 protein K16649 glft1; rhamnopyranosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,3/1,4-galactofuranosyltransferase [EC:2.4.1.287] D CP1002_03235 glycosyltransferase family 2 protein K16650 glft2; galactofuranosylgalactofuranosylrhamnosyl-N-acetylglucosaminyl-diphospho-decaprenol beta-1,5/1,6-galactofuranosyltransferase [EC:2.4.1.288] D CP1002_02530 glycosyltransferase family 2 protein K16870 wbbL; N-acetylglucosaminyl-diphospho-decaprenol L-rhamnosyltransferase [EC:2.4.1.289] D CP1002_04265 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CP1002_09205 glucosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cpk01005] D CP1002_08905 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cpk01011] D CP1002_04585 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CP1002_01310 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CP1002_06125 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CP1002_06110 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CP1002_06095 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CP1002_08545 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CP1002_02090 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CP1002_04790 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CP1002_06105 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CP1002_06120 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CP1002_07845 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CP1002_10575 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CP1002_06090 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CP1002_00175 penicillin-binding protein 2 K05364 pbpA; penicillin-binding protein A D CP1002_02355 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CP1002_04055 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CP1002_05995 hydrolase K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-] D CP1002_07720 hydrolase K21473 ripA; peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-] D CP1002_03545 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D CP1002_03675 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D CP1002_03685 class C sortase K07284 srtA; sortase A [EC:3.4.22.70] D CP1002_03010 class E sortase K07284 srtA; sortase A [EC:3.4.22.70] D CP1002_07365 mltG; endolytic transglycosylase MltG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CP1002_10595 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:cpk01004] D CP1002_04860 type I polyketide synthase K11533 fas; fatty acid synthase, bacteria type [EC:2.3.1.-] D CP1002_07210 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CP1002_02645 acyl-CoA desaturase K22769 desA3; NADPH-dependent stearoyl-CoA 9-desaturase [EC:1.14.19.-] D CP1002_03285 alpha/beta fold hydrolase K12437 pks13; polyketide synthase 13 D CP1002_05410 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CP1002_01315 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CP1002_03280 AMP-binding protein K12428 fadD32; fatty acid CoA ligase FadD32 D CP1002_06010 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:cpk01006] D CP1002_06045 polyprenyl synthetase family protein K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CP1002_09490 isoprenyl transferase K12503 E2.5.1.68; short-chain Z-isoprenyl diphosphate synthase [EC:2.5.1.68] D CP1002_05470 isoprenyl transferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CP1002_10485 squalene/phytoene synthase family protein K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D CP1002_06860 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CP1002_01500 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CP1002_07610 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CP1002_03245 decaprenyl-phosphate phosphoribosyltransferase K14136 K14136; decaprenyl-phosphate phosphoribosyltransferase [EC:2.4.2.45] C 01007 Amino acid related enzymes [BR:cpk01007] D CP1002_00715 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_08600 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_08325 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CP1002_02345 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CP1002_04235 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CP1002_08955 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CP1002_09720 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CP1002_06165 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CP1002_05120 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CP1002_10340 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CP1002_04145 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CP1002_03415 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CP1002_07340 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CP1002_07285 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CP1002_05495 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CP1002_03170 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CP1002_06665 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CP1002_07165 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CP1002_07355 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CP1002_08380 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CP1002_08375 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CP1002_03425 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CP1002_06280 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_05630 threonine-phosphate decarboxylase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_00615 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CP1002_07195 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CP1002_08355 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CP1002_08235 adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CP1002_01440 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CP1002_05925 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CP1002_10095 serC; phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cpk00194] D CP1002_08860 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CP1002_08865 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CP1002_08870 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CP1002_08875 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CP1002_08880 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CP1002_08885 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CP1002_08890 ATP synthase F0 subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CP1002_08895 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cpk03000] D CP1002_06965 hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CP1002_08695 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CP1002_06920 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CP1002_06930 DeoR/GlpR transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D CP1002_02455 substrate-binding domain-containing protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CP1002_03165 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D CP1002_00790 FadR family transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D CP1002_00670 PLP-dependent aminotransferase family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D CP1002_06255 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D CP1002_07705 TetR/AcrR family transcriptional regulator K21962 acnR; TetR/AcrR family transcriptional regulator, transcriptional repressor of aconitase D CP1002_04575 GAF domain-containing protein K21685 ramA; LuxR family transcriptional regulator, regulator of acetate metabolism D CP1002_00385 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D CP1002_03575 helix-turn-helix transcriptional regulator K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D CP1002_05480 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CP1002_01060 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CP1002_05485 winged helix-turn-helix transcriptional regulator K22298 smtB; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor D CP1002_01240 DUF2083 domain-containing protein K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator D CP1002_02385 helix-turn-helix transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D CP1002_06795 helix-turn-helix transcriptional regulator K27043 clgR; XRE family transcriptional regulator, stress-response regulator D CP1002_03745 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D CP1002_07000 metal-dependent transcriptional regulator K26252 dtxR; DtxR family transcriptional regulator, iron-dependent repressor D CP1002_02255 metal-dependent transcriptional regulator K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D CP1002_02475 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CP1002_00635 PRD domain-containing protein K03480 glcT; transcriptional antiterminator D CP1002_01040 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CP1002_02135 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CP1002_02545 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CP1002_02680 WhiB family transcriptional regulator K18955 whiB1_2_3_4; WhiB family transcriptional regulator, redox-sensing transcriptional regulator D CP1002_10605 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CP1002_04220 CarD family transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D CP1002_08345 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CP1002_05425 hrcA; heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D CP1002_00830 sugar-binding transcriptional regulator K05346 deoR; deoxyribonucleoside regulator D CP1002_07430 pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D CP1002_10555 YqgE/AlgH family protein K07735 algH; putative transcriptional regulator D CP1002_06950 nrdR; transcriptional repressor NrdR K07738 nrdR; transcriptional repressor NrdR D CP1002_06075 mraZ; division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cpk03021] D CP1002_10150 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CP1002_02000 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CP1002_01660 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CP1002_01665 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CP1002_07475 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CP1002_07040 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D CP1002_07005 sigma-70 family RNA polymerase sigma factor K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CP1002_00895 RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CP1002_09160 sigE; RNA polymerase sigma factor SigE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CP1002_00265 sigma-70 family RNA polymerase sigma factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CP1002_06680 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CP1002_07410 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CP1002_01585 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CP1002_09510 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CP1002_08925 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:cpk03019] D CP1002_05150 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D CP1002_06405 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CP1002_06760 ribonuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-] D CP1002_05530 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CP1002_04920 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CP1002_09060 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CP1002_09550 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CP1002_06740 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CP1002_08925 transcription termination factor Rho K03628 rho; transcription termination factor Rho D CP1002_03560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CP1002_04000 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_02130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_09680 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CP1002_04015 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D CP1002_10560 CCA tRNA nucleotidyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CP1002_07545 rapZ; RNase adapter RapZ K06958 rapZ; RNase adapter protein RapZ D CP1002_07955 DEAD/DEAH box helicase K03727 helY; ATP-dependent RNA helicase HelY [EC:5.6.2.6] D CP1002_06955 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D CP1002_00425 hrpB; ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:cpk03011] D CP1002_08455 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CP1002_06530 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CP1002_01810 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CP1002_01995 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CP1002_01900 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CP1002_10255 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CP1002_01725 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CP1002_01885 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CP1002_02060 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CP1002_01775 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CP1002_01990 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CP1002_01720 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CP1002_01985 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CP1002_09840 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CP1002_06735 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CP1002_06455 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CP1002_01825 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CP1002_09845 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CP1002_01800 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CP1002_05240 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CP1002_01595 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CP1002_01795 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CP1002_01780 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CP1002_01785 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CP1002_01860 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CP1002_01890 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CP1002_10245 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CP1002_01615 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CP1002_01590 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CP1002_01620 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CP1002_02055 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CP1002_01850 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CP1002_01910 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CP1002_01815 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CP1002_02005 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CP1002_01895 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CP1002_06490 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CP1002_08395 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CP1002_05155 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CP1002_01805 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CP1002_01790 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CP1002_01855 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CP1002_05160 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CP1002_09830 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CP1002_01820 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CP1002_01905 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CP1002_09825 type B 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CP1002_09820 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CP1002_09835 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CP1002_10635 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CP1002_08400 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CP1002_04700 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CP1002_09605 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D CP1002_02975 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_10165 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_08305 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_04605 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_02965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_10175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_08315 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_04595 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_02970 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_04600 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_10170 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_08310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cpk03009] D CP1002_06405 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CP1002_04920 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CP1002_05460 GTPase Era K03595 era; GTPase D CP1002_05165 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] D CP1002_06680 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CP1002_07410 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CP1002_01585 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CP1002_09705 rsmA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CP1002_07505 MFS transporter K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CP1002_08510 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CP1002_05435 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CP1002_10615 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CP1002_06080 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CP1002_09725 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CP1002_08290 TlyA family RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D CP1002_09190 methyltransferase domain-containing protein K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CP1002_04240 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CP1002_02980 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CP1002_08220 rRNA pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CP1002_06195 RluA family pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CP1002_02115 rimI; ribosomal protein S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CP1002_06465 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D CP1002_04970 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D CP1002_05000 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D CP1002_05150 Rne/Rng family ribonuclease K08300 rne; ribonuclease E [EC:3.1.26.12] D CP1002_07360 ruvX; Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CP1002_09060 DEAD/DEAH box helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CP1002_02650 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CP1002_08210 ribosome biogenesis GTPase Der K03977 engA; GTPase D CP1002_06880 hflX; GTPase HflX K03665 hflX; GTPase D CP1002_08910 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CP1002_07260 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CP1002_06695 rbfA; 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D CP1002_06675 rimP; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D CP1002_00450 RNA-binding S4 domain-containing protein K14761 rlbA; ribosome-associated protein D CP1002_05200 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein D CP1002_05445 ybeY; rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D CP1002_09390 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D CP1002_06400 DUF177 domain-containing protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cpk03016] D CP1002_05530 ribonuclease K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D CP1002_00715 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_08600 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_06665 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CP1002_06165 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CP1002_10340 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CP1002_09720 methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CP1002_08955 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CP1002_04145 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CP1002_03415 lysX; bifunctional lysylphosphatidylglycerol synthetase/lysine--tRNA ligase LysX K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CP1002_07340 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CP1002_07355 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CP1002_05495 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CP1002_07165 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CP1002_03170 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CP1002_04235 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CP1002_05120 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CP1002_07285 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CP1002_08380 pheS; phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CP1002_08375 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CP1002_08325 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CP1002_02345 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CP1002_07010 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CP1002_07910 tRNA (adenine-N1)-methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D CP1002_03325 trmB; tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CP1002_02010 truA; tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CP1002_06720 truB; tRNA pseudouridine(55) synthase TruB K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CP1002_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CP1002_08910 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CP1002_06860 miaA; tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CP1002_09945 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CP1002_10630 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CP1002_05650 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D CP1002_04800 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CP1002_07090 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D CP1002_02665 ybaK; Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CP1002_00695 nucleoside deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CP1002_06835 miaB; tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CP1002_06470 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CP1002_02260 tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CP1002_08385 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D CP1002_02980 23S rRNA pseudouridylate synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CP1002_08780 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CP1002_04435 folate-binding protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D CP1002_00710 tgt; tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CP1002_04060 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CP1002_02110 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CP1002_02120 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CP1002_02095 tsaE; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CP1002_06740 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:cpk03012] D CP1002_06690 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CP1002_08405 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CP1002_06535 elongation factor Ts K02357 tsf; elongation factor Ts D CP1002_01735 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CP1002_01730 fusA; elongation factor G K02355 fusA; elongation factor G D CP1002_08920 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CP1002_06545 ribosome recycling factor K02838 frr; ribosome recycling factor D CP1002_08915 prmC; peptide chain release factor N(5)-glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CP1002_09610 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CP1002_09625 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CP1002_01980 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CP1002_07405 efp; elongation factor P K02356 efp; elongation factor P D CP1002_02895 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 D CP1002_09635 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 C 03110 Chaperones and folding catalysts [BR:cpk03110] D CP1002_03670 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CP1002_04175 ATP-dependent Clp protease ATP-binding subunit K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CP1002_05105 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CP1002_03560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CP1002_04000 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_02130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_05430 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CP1002_03570 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CP1002_03565 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CP1002_06230 RNA-binding S4 domain-containing protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D CP1002_02125 co-chaperone GroES K04078 groES; chaperonin GroES D CP1002_04070 ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CP1002_08895 atpB; F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CP1002_07155 copper chaperone PCu(A)C K09796 pccA; periplasmic copper chaperone A D CP1002_04935 S8 family serine peptidase K14645 K14645; serine protease [EC:3.4.21.-] D CP1002_02025 mycP; type VII secretion-associated serine protease mycosin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CP1002_00110 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CP1002_07270 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CP1002_10210 trxA; thioredoxin K03671 TXN; thioredoxin D CP1002_10590 trxA; thioredoxin K03671 TXN; thioredoxin D CP1002_08830 tetratricopeptide repeat protein K05838 ybbN; putative thioredoxin D CP1002_03820 TlpA family protein disulfide reductase K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:cpk04131] D CP1002_05140 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CP1002_07560 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CP1002_09650 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CP1002_01325 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CP1002_06340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system [BR:cpk04121] D CP1002_07925 ubiquitin-like protein Pup K13570 pup; prokaryotic ubiquitin-like protein Pup C 03051 Proteasome [BR:cpk03051] D CP1002_07915 arc; proteasome ATPase K13527 mpa; proteasome-associated ATPase D CP1002_07930 pafA; Pup--protein ligase K13571 pafA; proteasome accessory factor A [EC:6.3.1.19] D CP1002_07935 WYL domain-containing protein K13572 pafB; proteasome accessory factor B D CP1002_07940 WYL domain-containing protein K13573 pafC; proteasome accessory factor C D CP1002_07920 proteasome accessory factor PafA2 K20814 dop; Pup amidohydrolase [EC:3.5.1.119] C 03032 DNA replication proteins [BR:cpk03032] D CP1002_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CP1002_10230 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CP1002_05540 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CP1002_05010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_10250 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_06210 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CP1002_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CP1002_05225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CP1002_01175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CP1002_06245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08620 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_00815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08770 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_00760 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CP1002_05645 bifunctional RNase H/acid phosphatase K22316 rhnA-cobC; ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] D CP1002_06500 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CP1002_08465 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CP1002_08765 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CP1002_00050 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CP1002_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CP1002_01160 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cpk03036] D CP1002_06405 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CP1002_03030 Lsr2 family protein K26249 lsr2; nucleoid-associated protein Lsr2 D CP1002_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CP1002_10315 dps; DNA starvation/stationary phase protection protein Dps K04047 dps; starvation-inducible DNA-binding protein D CP1002_08695 LysR family transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CP1002_06425 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein D CP1002_08250 segregation/condensation protein A K05896 scpA; segregation and condensation protein A D CP1002_08225 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B D CP1002_02915 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CP1002_06090 penicillin-binding protein 2 K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CP1002_06770 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CP1002_06130 FtsQ-type POTRA domain-containing protein K03589 ftsQ; cell division protein FtsQ D CP1002_06115 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CP1002_02920 ABC transporter permease K09811 ftsX; cell division transport system permease protein D CP1002_06135 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CP1002_10595 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CP1002_06145 sepF; cell division protein SepF K09772 sepF; cell division inhibitor SepF D CP1002_08255 ParA family protein K03496 parA; chromosome partitioning protein D CP1002_10610 ParA family protein K03496 parA; chromosome partitioning protein D CP1002_10605 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CP1002_10615 rsmG; 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CP1002_06520 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CP1002_08260 site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CP1002_09145 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CP1002_07555 whiA; DNA-binding protein WhiA K09762 whiA; cell division protein WhiA C 03400 DNA repair and recombination proteins [BR:cpk03400] D CP1002_06640 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CP1002_08530 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CP1002_04190 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CP1002_01070 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CP1002_10150 DEAD/DEAH box helicase K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] D CP1002_03895 NUDIX domain-containing protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CP1002_07065 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CP1002_00430 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D CP1002_09935 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CP1002_00435 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CP1002_06410 mutM; bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CP1002_10320 Fpg/Nei family DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CP1002_09930 Fpg/Nei family DNA glycosylase K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CP1002_03915 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CP1002_02335 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CP1002_08765 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CP1002_08465 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CP1002_08410 uvrA; excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D CP1002_08435 uvrB; excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D CP1002_07540 uvrC; excinuclease ABC subunit UvrC K03703 uvrC; excinuclease ABC subunit C D CP1002_09905 pcrA; DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CP1002_02725 ATP-dependent helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CP1002_02740 ATP-dependent DNA helicase UvrD2 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CP1002_01660 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CP1002_01665 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CP1002_02000 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CP1002_07475 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CP1002_09570 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CP1002_09410 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CP1002_09415 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CP1002_06210 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CP1002_00015 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CP1002_05225 holA; DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CP1002_01175 DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CP1002_06245 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08620 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_00815 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_08770 3'-5' exonuclease K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CP1002_00760 DNA polymerase III subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CP1002_05010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_10250 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_06825 recA; recombinase RecA K03553 recA; recombination protein RecA D CP1002_07225 ruvA; Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CP1002_07230 ruvB; Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CP1002_07220 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CP1002_07490 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CP1002_04205 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CP1002_00020 recF; DNA replication/repair protein RecF K03629 recF; DNA replication and repair protein RecF D CP1002_08520 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CP1002_05465 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CP1002_00770 recR; recombination protein RecR K06187 recR; recombination protein RecR D CP1002_08280 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CP1002_00050 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CP1002_00030 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CP1002_01160 topA; type I DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CP1002_06170 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CP1002_06940 lexA; transcriptional repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CP1002_06830 recX; recombination regulator RecX K03565 recX; regulatory protein D CP1002_04765 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CP1002_09940 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CP1002_08555 NUDIX hydrolase K23258 mutT1; 8-oxo-(d)GTP phosphatase [EC:3.6.1.69] D CP1002_08265 NUDIX hydrolase K01554 K01554; 8-oxo-dGDP phosphatase [EC:3.6.1.58] D CP1002_04715 nrdE; class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CP1002_04405 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CP1002_04725 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CP1002_06700 bifunctional oligoribonuclease/PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3] C 03029 Mitochondrial biogenesis [BR:cpk03029] D CP1002_06690 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CP1002_08405 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CP1002_06535 elongation factor Ts K02357 tsf; elongation factor Ts D CP1002_01735 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CP1002_01730 fusA; elongation factor G K02355 fusA; elongation factor G D CP1002_05460 GTPase Era K03595 era; GTPase D CP1002_08325 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CP1002_10340 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CP1002_07340 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CP1002_05495 glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D CP1002_08955 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CP1002_08750 gatA; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatA K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CP1002_08710 gatB; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatB K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CP1002_08755 gatC; Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subunit GatC K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CP1002_05010 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_10250 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CP1002_03560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CP1002_03565 grpE; nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CP1002_04000 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_02130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_02125 co-chaperone GroES K04078 groES; chaperonin GroES D CP1002_05430 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CP1002_03570 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CP1002_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CP1002_09145 Mrp/NBP35 family ATP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D CP1002_07610 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CP1002_07615 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9] D CP1002_03005 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CP1002_10620 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cpk02000] D CP1002_09120 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CP1002_09370 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D CP1002_04505 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CP1002_04510 ATP-binding cassette domain-containing protein K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CP1002_09695 ABC-F family ATP-binding cassette domain-containing protein K15738 uup; ABC transport system ATP-binding/permease protein D CP1002_00940 extracellular solute-binding protein K02012 afuA; iron(III) transport system substrate-binding protein D CP1002_00935 transporter K02011 afuB; iron(III) transport system permease protein D CP1002_00930 ATP-binding cassette domain-containing protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CP1002_00505 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CP1002_00285 ABC transporter permease subunit K05846 opuBD; osmoprotectant transport system permease protein D CP1002_00290 ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CP1002_00295 ATP-binding cassette domain-containing protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CP1002_01950 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CP1002_01920 extracellular solute-binding protein K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein D CP1002_01925 sugar ABC transporter permease K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CP1002_01930 sugar ABC transporter permease K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein D CP1002_02515 ABC transporter substrate-binding protein K10236 thuE; trehalose/maltose transport system substrate-binding protein D CP1002_02510 sugar ABC transporter permease K10237 thuF; trehalose/maltose transport system permease protein D CP1002_02505 carbohydrate ABC transporter permease K10238 thuG; trehalose/maltose transport system permease protein D CP1002_00090 sugar ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D CP1002_00095 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D CP1002_00100 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D CP1002_04465 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CP1002_04470 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CP1002_04480 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CP1002_09875 glutamate ABC transporter substrate-binding protein K10005 gluB; glutamate transport system substrate-binding protein D CP1002_09870 amino acid ABC transporter permease K10006 gluC; glutamate transport system permease protein D CP1002_09865 amino acid ABC transporter permease K10007 gluD; glutamate transport system permease protein D CP1002_09880 amino acid ABC transporter ATP-binding protein K10008 gluA; glutamate transport system ATP-binding protein [EC:7.4.2.1] D CP1002_02215 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CP1002_02220 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CP1002_02205 ABC transporter permease K02072 metI; D-methionine transport system permease protein D CP1002_02210 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CP1002_08480 ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CP1002_03885 glutamate ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CP1002_08485 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CP1002_09320 ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CP1002_09310 ABC transporter permease K15582 oppC; oligopeptide transport system permease protein D CP1002_09305 ABC transporter ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CP1002_01830 ABC transporter family substrate-binding protein K13889 gsiB; glutathione transport system substrate-binding protein D CP1002_01845 ABC transporter permease K13890 gsiC; glutathione transport system permease protein D CP1002_01840 ABC transporter permease K13891 gsiD; glutathione transport system permease protein D CP1002_01835 ABC transporter ATP-binding protein K13892 gsiA; glutathione transport system ATP-binding protein D CP1002_07250 peptide ABC transporter K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_05280 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_05325 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_10000 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_10405 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CP1002_05285 ABC transporter permease subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_05320 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_09995 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_03525 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_10410 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CP1002_05315 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CP1002_09990 ABC transporter permease subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CP1002_03530 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_10415 dipeptide/oligopeptide/nickel ABC transporter permease/ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_05260 ATP-binding cassette domain-containing protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_05310 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_09985 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CP1002_02295 ABC transporter substrate-binding protein K25132 hmuT; heme transport system substrate-binding protein D CP1002_02300 iron ABC transporter permease K25133 hmuU; heme transport system permease protein D CP1002_02305 heme ABC transporter ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5] D CP1002_00155 iron-siderophore ABC transporter substrate-binding protein K25286 fagD; iron-siderophore transport system substrate-binding protein D CP1002_00150 iron chelate uptake ABC transporter family permease subunit K23186 fepD; iron-siderophore transport system permease protein D CP1002_00145 iron chelate uptake ABC transporter family permease subunit K23187 fepG; iron-siderophore transport system permease protein D CP1002_00140 ABC transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CP1002_02940 ABC transporter substrate-binding protein K25282 yclQ; iron-siderophore transport system substrate-binding protein D CP1002_02950 iron chelate uptake ABC transporter family permease subunit K25283 yclO; iron-siderophore transport system permease protein D CP1002_02945 iron chelate uptake ABC transporter family permease subunit K25284 yclN; iron-siderophore transport system permease protein D CP1002_02955 ATP-binding cassette domain-containing protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-] D CP1002_08720 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CP1002_01475 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CP1002_03475 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CP1002_00220 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CP1002_08185 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CP1002_08730 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CP1002_01480 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CP1002_08180 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CP1002_03480 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CP1002_00230 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CP1002_08725 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CP1002_08815 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CP1002_01470 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CP1002_08170 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CP1002_03485 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CP1002_00225 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CP1002_03190 ABC transporter substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein D CP1002_03195 iron ABC transporter permease K25027 btuC; cobalamin transport system permease protein D CP1002_03200 ABC transporter ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8] D CP1002_00580 zinc ABC transporter solute-binding protein K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CP1002_00570 metal ABC transporter permease K11708 troC; manganese/zinc/iron transport system permease protein D CP1002_00575 metal ABC transporter permease K11709 troD; manganese/zinc/iron transport system permease protein D CP1002_00565 metal ABC transporter ATP-binding protein K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CP1002_06815 biotin transporter BioY K03523 bioY; biotin transport system substrate-specific component D CP1002_06805 energy-coupling factor transporter transmembrane protein EcfT K16783 bioN; biotin transport system permease protein D CP1002_06810 ABC transporter ATP-binding protein K16784 bioM; biotin transport system ATP-binding protein [EC:7.6.2.-] D CP1002_09335 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D CP1002_09340 ABC transporter ATP-binding protein K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CP1002_09345 hypothetical protein K16925 ykoE; energy-coupling factor transport system permease protein D CP1002_02235 zinc ABC transporter solute-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D CP1002_02245 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CP1002_02250 metal ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein D CP1002_02240 metal ABC transporter ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D CP1002_00595 ABC transporter permease K09690 wzm; homopolymeric O-antigen transport system permease protein D CP1002_00590 ABC transporter ATP-binding protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D CP1002_10350 ABC transporter permease K09813 hrtB; hemin transport system permease protein D CP1002_10345 ABC transporter ATP-binding protein K09814 hrtA; hemin transport system ATP-binding protein [EC:7.6.2.-] D CP1002_02920 ABC transporter permease K09811 ftsX; cell division transport system permease protein D CP1002_02915 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CP1002_03765 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CP1002_03905 multidrug ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CP1002_07620 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CP1002_01690 ABC transporter permease subunit K01992 ABC-2.P; ABC-2 type transport system permease protein D CP1002_01000 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CP1002_03660 transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D CP1002_04965 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CP1002_03760 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CP1002_03900 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CP1002_07625 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CP1002_01685 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CP1002_01005 ATP-binding cassette domain-containing protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CP1002_03665 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CP1002_04960 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CP1002_10190 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CP1002_04615 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D CP1002_05745 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D CP1002_03625 FtsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein D CP1002_04610 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CP1002_03620 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CP1002_07650 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein D CP1002_10535 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CP1002_00630 DASS family sodium-coupled anion symporter K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D CP1002_10025 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D CP1002_06705 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D CP1002_03055 uhpT; hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D CP1002_03210 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D CP1002_00945 MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D CP1002_02325 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CP1002_08160 MFS transporter K23448 sfaA; MFS transporter, DHA1 family, staphyloferrin A biosynthesis exporter D CP1002_00840 MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D CP1002_02410 multidrug efflux MFS transporter K18926 lmrB; MFS transporter, DHA2 family, lincomycin resistance protein D CP1002_00250 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D CP1002_03065 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CP1002_10225 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CP1002_06925 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CP1002_06900 HPr family phosphocarrier protein K02784 ptsH; phosphocarrier protein HPr D CP1002_00645 PTS glucose transporter subunit IIA K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CP1002_00640 PTS transporter subunit EIIC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CP1002_08450 PTS transporter subunit EIIC K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-] D CP1002_06910 PTS transporter subunit EIIA K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CP1002_06480 PTS transporter subunit EIIA K25814 manP; mannose PTS system EIIBCA component [EC:2.7.1.191] D CP1002_00415 PTS transporter subunit EIIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CP1002_00420 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CP1002_07810 HPr family phosphocarrier protein K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CP1002_00480 aquaporin family protein K02440 glpF; glycerol uptake facilitator D CP1002_02730 potassium channel family protein K10716 kch; voltage-gated potassium channel D CP1002_09790 mscL; large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D CP1002_08670 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D CP1002_05040 mechanosensitive ion channel K22044 ybiO; moderate conductance mechanosensitive channel D CP1002_00235 magnesium transporter K06213 mgtE; magnesium transporter D CP1002_08060 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D CP1002_04620 CrcB family protein K06199 crcB; fluoride exporter D CP1002_04625 fluoride efflux transporter family protein K06199 crcB; fluoride exporter D CP1002_08085 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D CP1002_08080 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D CP1002_05450 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D CP1002_02855 amino acid permease K11738 ansP; L-asparagine permease D CP1002_09230 amino acid permease K16237 aroP; aromatic amino acid permease D CP1002_09240 amino acid permease K16237 aroP; aromatic amino acid permease D CP1002_09565 amino acid permease K03758 arcD; arginine:ornithine antiporter / lysine permease D CP1002_08650 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D CP1002_03315 MMPL family transporter K20470 mmpL3; trehalose monomycolate/heme transporter D CP1002_01270 DUF2516 family protein K11742 mdtI; spermidine export protein MdtI D CP1002_06205 rarD; EamA family transporter RarD K05786 rarD; chloramphenicol-sensitive protein RarD D CP1002_05030 DMT family transporter K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CP1002_05715 TRAP transporter large permease subunit K07084 yuiF; putative amino acid transporter D CP1002_00720 GntP family permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CP1002_00775 GntP family transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CP1002_07880 anaerobic C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D CP1002_08205 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CP1002_08960 L-lactate permease K03303 lutP; lactate permease D CP1002_04120 BCCT family transporter K02168 betT; choline/glycine/proline betaine transport protein D CP1002_09035 putP; sodium/proline symporter PutP K11928 putP; sodium/proline symporter D CP1002_10055 cation acetate symporter K14393 actP; cation/acetate symporter D CP1002_04040 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D CP1002_03650 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CP1002_04350 TrkH family potassium uptake protein K03498 trkH; trk/ktr system potassium uptake protein D CP1002_04355 TrkA family potassium uptake protein K03499 trkA; trk/ktr system potassium uptake protein D CP1002_04305 uracil-xanthine permease K24206 uacT; uric acid transporter D CP1002_10115 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CP1002_01865 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D CP1002_01515 transporter K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D CP1002_03975 Na+/H+ antiporter subunit A K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CP1002_00985 DUF4040 family protein K05565 mnhA; multicomponent Na+:H+ antiporter subunit A D CP1002_00980 cation:proton antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CP1002_03970 Na(+)/H(+) antiporter subunit C K05567 mnhC; multicomponent Na+:H+ antiporter subunit C D CP1002_03965 Na+/H+ antiporter subunit D K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CP1002_00975 monovalent cation/H+ antiporter subunit D family protein K05568 mnhD; multicomponent Na+:H+ antiporter subunit D D CP1002_03960 Na+/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CP1002_00970 monovalent cation/H+ antiporter subunit E K05569 mnhE; multicomponent Na+:H+ antiporter subunit E D CP1002_03955 cation:proton antiporter K05570 mnhF; multicomponent Na+:H+ antiporter subunit F D CP1002_03950 cation:proton antiporter K05571 mnhG; multicomponent Na+:H+ antiporter subunit G D CP1002_10575 murJ; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CP1002_05330 AEC family transporter K13936 mdcF; malonate transporter and related proteins D CP1002_08700 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO D CP1002_05235 LysE family translocator K05835 rhtC; threonine efflux protein D CP1002_10550 AzlC family ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D CP1002_10545 branched-chain amino acid ABC transporter permease K26606 azlD; branched chain amino acid efflux pump D CP1002_09395 AI-2E family transporter K20469 K20469; putative heme transporter D CP1002_03540 AI-2E family transporter K20469 K20469; putative heme transporter D CP1002_02995 queuosine precursor transporter K09125 yhhQ; queuosine precursor transporter D CP1002_05475 rubrerythrin family protein K22736 VIT; vacuolar iron transporter family protein D CP1002_00345 VIT family protein K22736 VIT; vacuolar iron transporter family protein D CP1002_06115 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CP1002_01455 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D CP1002_01380 cytochrome c biogenesis protein CcdA K06196 ccdA; cytochrome c-type biogenesis protein D CP1002_09675 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D CP1002_03310 UPF0104 family protein K20468 K20468; putative heme transporter D CP1002_07150 copper resistance protein CopC K07156 copC; copper resistance protein C C 02044 Secretion system [BR:cpk02044] D CP1002_07375 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CP1002_01120 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] D CP1002_01125 hypothetical protein K12510 tadB; tight adherence protein B D CP1002_06150 YggT family protein K02221 yggT; YggT family protein D CP1002_05220 ComEC/Rec2 family competence protein K02238 comEC; competence protein ComEC D CP1002_02035 type VII secretion protein EccC K27086 eccC; ESX secretion system protein EccC D CP1002_02030 eccD; type VII secretion integral membrane protein EccD K27087 eccD; ESX secretion system protein EccD D CP1002_02025 mycP; type VII secretion-associated serine protease mycosin K14743 mycP; membrane-anchored mycosin MYCP [EC:3.4.21.-] D CP1002_02050 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein D CP1002_02045 WXG100 family type VII secretion target K14956 esx; ESAT-6 family protein D CP1002_08120 secA2; accessory Sec system translocase SecA2 K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CP1002_02620 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CP1002_07240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CP1002_01580 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CP1002_07245 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CP1002_07580 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CP1002_01955 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CP1002_06450 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CP1002_06435 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CP1002_07235 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CP1002_03005 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CP1002_10620 yidC; membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CP1002_07945 Sec-independent protein translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA D CP1002_09150 tatB; Sec-independent protein translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CP1002_07950 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:cpk02042] D CP1002_08085 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D CP1002_08080 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D CP1002_05450 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D CP1002_04400 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:cpk02022] D CP1002_00950 response regulator transcription factor K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CP1002_01330 two-component sensor histidine kinase K07768 senX3; two-component system, OmpR family, sensor histidine kinase SenX3 [EC:2.7.13.3] D CP1002_01335 response regulator transcription factor K07776 regX3; two-component system, OmpR family, response regulator RegX3 D CP1002_09810 HAMP domain-containing histidine kinase K07653 mprB; two-component system, OmpR family, sensor histidine kinase MprB [EC:2.7.13.3] D CP1002_09815 response regulator transcription factor K07669 mprA; two-component system, OmpR family, response regulator MprA D CP1002_02600 HAMP domain-containing histidine kinase K07654 mtrB; two-component system, OmpR family, sensor histidine kinase MtrB [EC:2.7.13.3] D CP1002_02595 response regulator transcription factor K07670 mtrA; two-component system, OmpR family, response regulator MtrA D CP1002_04330 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CP1002_00955 HAMP domain-containing histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D CP1002_04325 response regulator transcription factor K02483 K02483; two-component system, OmpR family, response regulator C 02035 Bacterial motility proteins [BR:cpk02035] D CP1002_07375 prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D CP1002_01120 TadA family conjugal transfer-associated ATPase K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cpk04812] D CP1002_06135 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CP1002_08255 ParA family protein K03496 parA; chromosome partitioning protein D CP1002_10610 ParA family protein K03496 parA; chromosome partitioning protein D CP1002_10605 ParB/RepB/Spo0J family partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cpk04147] D CP1002_09550 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CP1002_07560 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CP1002_09650 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CP1002_07565 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CP1002_06340 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CP1002_00110 peptidylprolyl isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CP1002_04000 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_02130 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CP1002_03560 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CP1002_09920 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CP1002_02155 guaB; IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CP1002_02160 GuaB3 family IMP dehydrogenase-related protein K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CP1002_01735 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CP1002_01545 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CP1002_03085 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27] D CP1002_10535 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CP1002_05410 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CP1002_01315 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CP1002_02585 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D CP1002_01960 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CP1002_07255 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CP1002_08335 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CP1002_08340 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CP1002_05660 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CP1002_09065 galK; galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CP1002_08825 glgB; 1,4-alpha-glucan branching protein GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CP1002_00475 glpK; glycerol kinase GlpK K00864 glpK; glycerol kinase [EC:2.7.1.30] D CP1002_05680 glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_05865 glnA; type I glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CP1002_01410 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CP1002_08635 phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CP1002_09885 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CP1002_01235 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CP1002_08795 electron transfer flavoprotein subunit alpha/FixB family protein K03522 fixB; electron transfer flavoprotein alpha subunit D CP1002_07595 glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CP1002_07570 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CP1002_01325 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:cpk02048] D CP1002_00125 CRISPR-associated protein Cas5 K19125 casD; CRISPR system Cascade subunit CasD D CP1002_05795 site-specific DNA-methyltransferase K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CP1002_07895 HigA family addiction module antidote protein K21498 higA-1; antitoxin HigA-1 D CP1002_06135 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CP1002_00715 tRNA glutamyl-Q(34) synthetase GluQRS K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_08600 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CP1002_08790 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels [BR:cpk04040] C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cpk01504] D CP1002_00840 MFS transporter K08168 tetB; MFS transporter, DHA2 family, metal-tetracycline-proton antiporter D CP1002_00250 MFS transporter K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein D CP1002_08190 DUF2156 domain-containing protein K14205 mprF; phosphatidylglycerol lysyltransferase [EC:2.3.2.3] C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cpk03100] D CP1002_00065 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CP1002_00080 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CP1002_04645 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CP1002_00625 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_00660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_09975 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_08980 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_04940 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CP1002_05555 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CP1002_04535 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CP1002_04545 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CP1002_07130 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CP1002_08590 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CP1002_08585 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CP1002_04530 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CP1002_07120 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CP1002_07135 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CP1002_03385 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CP1002_05075 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CP1002_04915 tRNA-His K14226 tRNA-His; tRNA His D CP1002_00060 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CP1002_00200 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_08470 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_07795 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_04820 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_09530 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CP1002_04900 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CP1002_04525 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CP1002_02780 tRNA-Met K14230 tRNA-Met; tRNA Met D CP1002_01570 tRNA-Met K14230 tRNA-Met; tRNA Met D CP1002_05560 tRNA-Ile K14230 tRNA-Met; tRNA Met D CP1002_04550 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CP1002_01020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CP1002_08135 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CP1002_05080 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CP1002_00610 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CP1002_00620 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CP1002_00700 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CP1002_00740 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CP1002_01180 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CP1002_01565 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CP1002_04280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CP1002_01575 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CP1002_01560 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CP1002_07125 tRNA-Val K14237 tRNA-Val; tRNA Val D CP1002_07140 tRNA-Val K14237 tRNA-Val; tRNA Val D CP1002_05605 tRNA-Val K14237 tRNA-Val; tRNA Val D CP1002_02965 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_10175 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_08315 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_04595 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CP1002_02970 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_04600 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_10170 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_08310 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CP1002_02975 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_10165 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_08305 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_04605 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CP1002_00745 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CP1002_05650 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D CP1002_02930 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CP1002_00735 SDR family oxidoreductase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D CP1002_00730 alcohol dehydrogenase catalytic domain-containing protein K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D CP1002_00520 decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase K16652 dprE2; decaprenylphospho-beta-D-erythro-pentofuranosid-2-ulose 2-reductase [EC:1.1.1.333] D CP1002_10070 aldo/keto reductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CP1002_08705 aldo/keto reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CP1002_00525 FAD-binding oxidoreductase K16653 dprE1; decaprenylphospho-beta-D-ribofuranose 2-oxidase [EC:1.1.98.3] D CP1002_01550 geranylgeranyl reductase family protein K21401 menJ; menaquinone-9 beta-reductase [EC:1.3.99.38] D CP1002_02400 NAD(P)H-quinone dehydrogenase K23842 lpdA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D CP1002_06605 mtr; mycothione reductase K17883 mtr; mycothione reductase [EC:1.8.1.15] D CP1002_03080 msrA; peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CP1002_07105 msrB; peptide-methionine (R)-S-oxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CP1002_07160 Dyp-type peroxidase K15733 E1.11.1.19; dye decolorizing peroxidase [EC:1.11.1.19] D CP1002_04875 thioredoxin-dependent thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CP1002_07275 thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CP1002_06975 alkyl hydroperoxide reductase K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28] D CP1002_06970 peroxiredoxin K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28] D CP1002_05060 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CP1002_10005 oxygenase K18058 asnO; L-asparagine oxygenase [EC:1.14.11.39] D CP1002_04885 antibiotic biosynthesis monooxygenase K21481 mhuD; heme oxygenase (mycobilin-producing) [EC:1.14.99.57] D CP1002_04720 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D CP1002_03865 FAD-dependent oxidoreductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CP1002_09295 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CP1002_09960 mycoredoxin K18917 mrx1; mycoredoxin [EC:1.20.4.3] D CP1002_01705 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CP1002_01285 pflA; pyruvate formate lyase-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CP1002_08045 SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CP1002_04460 mshD; mycothiol synthase K15520 mshD; mycothiol synthase [EC:2.3.1.189] D CP1002_08010 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CP1002_03355 acyltransferase K27307 tmaT; acetyltransferase [EC:2.3.1.-] D CP1002_10125 glutaminyl-peptide cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5] D CP1002_01320 mshA; D-inositol-3-phosphate glycosyltransferase K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250] D CP1002_06335 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CP1002_08525 DAK2 domain-containing protein K07030 fakA; fatty acid kinase [EC:2.7.2.18] D CP1002_05685 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CP1002_09105 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CP1002_03275 cutinase family protein K27360 cut6; phospholipase A/thioesterase [EC:3.1.1.-] D CP1002_05020 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CP1002_05205 histidine phosphatase family protein K22306 gpgP; glucosyl-3-phosphoglycerate phosphatase [EC:3.1.3.85] D CP1002_09715 TatD family hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CP1002_08850 nucS; endonuclease NucS K07503 nucS; endonuclease [EC:3.1.-.-] D CP1002_00995 DUF4185 domain-containing protein K27495 endoMA; D-arabinan endo alpha-(1,5)-arabinofuranosidase [EC:3.2.1.226] D CP1002_03925 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CP1002_07495 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CP1002_09270 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase K15525 mshB; N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase [EC:3.5.1.103] D CP1002_09500 mca; mycothiol conjugate amidase Mca K18455 mca; mycothiol S-conjugate amidase [EC:3.5.1.115] D CP1002_03610 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CP1002_10325 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CP1002_07850 mshC; cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase K15526 mshC; L-cysteine:1D-myo-inositol 2-amino-2-deoxy-alpha-D-glucopyranoside ligase [EC:6.3.1.13] D CP1002_10080 acetyl-CoA carboxylase carboxyl transferase subunit alpha/beta K04104 accD3; acyl-CoA carboxylase subunit beta [EC:6.4.1.-] D CP1002_03290 acyl-CoA carboxylase subunit beta K27093 accD4; long chain acyl-CoA carboxylase carboxyl transferase subunit beta 4 [EC:6.4.1.- 2.1.3.-] C 99981 Carbohydrate metabolism D CP1002_08965 (Fe-S)-binding protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D CP1002_08970 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D CP1002_08975 lactate utilization protein C K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D CP1002_07660 SUF system NifU family Fe-S cluster assembly protein K04488 iscU; nitrogen fixation protein NifU and related proteins D CP1002_08800 electron transfer flavoprotein subunit beta/FixA family protein K03521 fixA; electron transfer flavoprotein beta subunit C 99983 Lipid metabolism D CP1002_04925 SDR family oxidoreductase K27306 cmrA; mycolic acid reductase C 99984 Nucleotide metabolism D CP1002_04410 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction D CP1002_04710 nrdI; class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D CP1002_05300 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D CP1002_10140 DUF3235 domain-containing protein K21687 rpfA; resuscitation-promoting factor RpfA D CP1002_09710 DUF348 domain-containing protein K21688 rpfB; resuscitation-promoting factor RpfB C 99987 Cofactor metabolism D CP1002_06625 VWA domain-containing protein K13580 K13580; magnesium chelatase subunit ChlD-like protein D CP1002_02905 AbgT family transporter K12942 abgT; aminobenzoyl-glutamate transport protein C 99988 Secondary metabolism D CP1002_08595 poly(3-hydroxybutyrate) depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase D CP1002_04245 poly(3-hydroxyalkanoate) depolymerase K03932 lpqC; polyhydroxybutyrate depolymerase D CP1002_03070 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D CP1002_09755 DoxX family protein K15977 K15977; putative oxidoreductase D CP1002_08685 DoxX family membrane protein K15977 K15977; putative oxidoreductase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CP1002_10135 cold shock domain-containing protein K03704 cspA; cold shock protein D CP1002_01155 cold-shock protein K03704 cspA; cold shock protein D CP1002_06485 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation C 99975 Protein processing D CP1002_04775 clpS; ATP-dependent Clp protease adapter ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CP1002_05085 trigger factor K03545 tig; trigger factor D CP1002_03455 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein D CP1002_03460 urease accessory protein UreF K03188 ureF; urease accessory protein D CP1002_03465 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D CP1002_03470 urease accessory protein UreD K03190 ureD; urease accessory protein D CP1002_02925 smpB; SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D CP1002_04705 nrdH; glutaredoxin-like protein NrdH K06191 nrdH; glutaredoxin-like protein NrdH D CP1002_06510 YifB family Mg chelatase-like AAA ATPase K07391 comM; magnesium chelatase family protein D CP1002_03810 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein D CP1002_01460 cytochrome c biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein C 99976 Replication and repair D CP1002_05785 AAA family ATPase K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D CP1002_07900 RecB family exonuclease K07465 K07465; putative RecB family exonuclease D CP1002_06515 DNA-processing protein DprA K04096 smf; DNA processing protein D CP1002_07350 replication-associated recombination protein A K07478 ycaJ; putative ATPase C 99979 Viral proteins C 99998 Others D CP1002_06800 PspA/IM30 family protein K03969 pspA; phage shock protein A D CP1002_00765 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CP1002_08240 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CP1002_03515 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D CP1002_09080 sodium:solute symporter family protein K03307 TC.SSS; solute:Na+ symporter, SSS family D CP1002_06415 alanine:cation symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CP1002_05355 brnQ; branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CP1002_03100 NupC/NupG family nucleoside CNT transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family D CP1002_05175 transporter K07085 K07085; putative transport protein C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D CP1002_04950 carbon starvation protein A K06200 cstA; carbon starvation protein D CP1002_09280 typA; translational GTPase TypA K06207 typA; GTP-binding protein D CP1002_07695 ACT domain-containing protein K07166 K07166; ACT domain-containing protein D CP1002_05440 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CP1002_08625 cyclic nucleotide-binding/CBS domain-containing protein K07182 K07182; CBS domain-containing protein C 99992 Structural proteins D CP1002_00335 hydrolase K07273 acm; lysozyme D CP1002_03615 HlyD family efflux transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein C 99994 Others D CP1002_04490 phoU; phosphate signaling complex protein PhoU K02039 phoU; phosphate transport system protein D CP1002_06775 TerC family protein K05794 terC; tellurite resistance protein TerC B B 09194 Poorly characterized C 99996 General function prediction only D CP1002_03860 GNAT family N-acetyltransferase K02348 elaA; ElaA protein D CP1002_01150 DUF1998 domain-containing protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D CP1002_05035 globin K06886 glbN; hemoglobin D CP1002_00705 MMPL family transporter K06994 K06994; putative drug exporter of the RND superfamily D CP1002_07640 sufB; Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D CP1002_07645 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D CP1002_02350 inner membrane protein YhjD K07058 K07058; membrane protein D CP1002_08005 FxsA family protein K07113 fxsA; UPF0716 protein FxsA D CP1002_03015 DUF2020 domain-containing protein K07146 K07146; UPF0176 protein D CP1002_10305 rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein D CP1002_09050 VOC family protein K04750 phnB; PhnB protein D CP1002_10310 DedA family protein K03975 dedA; membrane-associated protein D CP1002_07325 YhgE/Pip domain-containing protein K01421 yhgE; putative membrane protein D CP1002_10335 ABC transporter permease K01421 yhgE; putative membrane protein D CP1002_08475 DUF368 domain-containing protein K08974 K08974; putative membrane protein D CP1002_08130 hypothetical protein K09858 K09858; SEC-C motif domain protein D CP1002_09375 alkylphosphonate utilization protein K06193 phnA; protein PhnA C 99997 Function unknown D CP1002_03320 NYN domain-containing protein K06860 K06860; putative heme uptake system protein D CP1002_05230 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D CP1002_05415 hypothetical protein K06867 K06867; uncharacterized protein D CP1002_04555 N-acetyltransferase K06975 K06975; uncharacterized protein D CP1002_00455 VOC family protein K06996 K06996; uncharacterized protein D CP1002_00650 VOC family protein K06996 K06996; uncharacterized protein D CP1002_04690 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein D CP1002_05730 PTS sugar transporter subunit IIC K07035 K07035; uncharacterized protein D CP1002_07335 metalloprotease K07054 K07054; uncharacterized protein D CP1002_07425 TIGR01777 family protein K07071 K07071; uncharacterized protein D CP1002_01700 permease K07089 K07089; uncharacterized protein D CP1002_00410 TSUP family transporter K07090 K07090; uncharacterized protein D CP1002_01025 metallophosphoesterase K07098 K07098; uncharacterized protein D CP1002_03845 phosphoribosyltransferase K07101 K07101; uncharacterized protein D CP1002_05295 YeeE/YedE family protein K07112 K07112; uncharacterized protein D CP1002_00400 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D CP1002_04840 DUF418 domain-containing protein K07148 K07148; uncharacterized protein D CP1002_05640 hypothetical protein K07164 K07164; uncharacterized protein D CP1002_10625 yidD; membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D CP1002_08105 bifunctional nuclease family protein K08999 K08999; uncharacterized protein D CP1002_09540 DUF501 domain-containing protein K09009 K09009; uncharacterized protein D CP1002_01030 GatB/YqeY domain-containing protein K09117 K09117; uncharacterized protein D CP1002_02775 UPF0182 family protein K09118 K09118; uncharacterized protein D CP1002_09290 DUF402 domain-containing protein K09146 K09146; uncharacterized protein D CP1002_07690 PFL family protein K09157 K09157; uncharacterized protein D CP1002_06780 hypothetical protein K09780 K09780; uncharacterized protein D CP1002_09355 DUF808 domain-containing protein K09781 K09781; uncharacterized protein D CP1002_05180 DUF454 domain-containing protein K09790 K09790; uncharacterized protein D CP1002_08330 Trm112 family protein K09791 K09791; uncharacterized protein D CP1002_06660 yaaA; peroxide stress protein YaaA K09861 K09861; uncharacterized protein D CP1002_10465 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein D CP1002_06685 YlxR family protein K07742 ylxR; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 27, 2024