+D GENES KO #

  KEGG Orthology (KO) - Helicobacter pylori 26695

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:hpy00010] D HP_1103 glucokinase (glk) K00845 glk; glucokinase [EC:2.7.1.2] D HP_1166 glucose-6-phosphate isomerase (pgi) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HP_1385 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D HP_0176 fructose-bisphosphate aldolase (tsr) K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HP_0194 triosephosphate isomerase (tpi) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HP_0921 glyceraldehyde-3-phosphate dehydrogenase (gap) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HP_1346 glyceraldehyde-3-phosphate dehydrogenase (gap) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HP_1345 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HP_0974 phosphoglycerate mutase (pgm) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HP_0154 enolase (eno) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HP_0121 phosphoenolpyruvate synthase (ppsA) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HP_1110 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HP_1111 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HP_1108 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HP_1109 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HP_0589 ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HP_0590 ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HP_1104 cinnamyl-alcohol dehydrogenase ELI3-2 (cad) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D HP_1045 acetyl-CoA synthetase (acoE) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HP_1275 phosphomannomutase (algC){Pseudomonas aeruginosa} K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:hpy00020] D HP_0026 citrate synthase (gltA) K01647 CS; citrate synthase [EC:2.3.3.1] D HP_0779 aconitase B (acnB) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D HP_0027 isocitrate dehydrogenase (icd) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HP_0589 ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HP_0590 ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HP_0591 ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] D HP_0588 ferrodoxin-like protein K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3] D HP_0192 fumarate reductase, flavoprotein subunit (frdA) K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D HP_0191 fumarate reductase, iron-sulfur subunit (frdB) K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D HP_0193 fumarate reductase, cytochrome b subunit (frdC) K25996 frdC; succinate dehydrogenase subunit C D HP_1325 fumarase (fumC) K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HP_0086 conserved hypothetical protein K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D HP_1110 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HP_1111 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HP_1108 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HP_1109 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:hpy00030] D HP_1166 glucose-6-phosphate isomerase (pgi) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HP_1101 glucose-6-phosphate dehydrogenase (g6pD) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D HP_1102 glucose-6-phosphate 1-dehydrogenase (devB) K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D HP_1386 D-ribulose-5-phosphate 3 epimerase (rpe) K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HP_1088 transketolase A (tktA) K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D HP_1495 transaldolase (tal) K00616 TALDO1; transaldolase [EC:2.2.1.2] D HP_0574 galactosidase acetyltransferase (lacA) K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D HP_1179 phosphopentomutase (deoB) K01839 deoB; phosphopentomutase [EC:5.4.2.7] D HP_1275 phosphomannomutase (algC){Pseudomonas aeruginosa} K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HP_0742 phosphoribosylpyrophosphate synthetase (prsA) K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HP_1100 6-phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D HP_1099 2-keto-3-deoxy-6-phosphogluconate aldolase (eda) K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D HP_0176 fructose-bisphosphate aldolase (tsr) K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HP_1385 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] C 00040 Pentose and glucuronate interconversions [PATH:hpy00040] D HP_0646 UDP-glucose pyrophosphorylase (galU) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HP_1386 D-ribulose-5-phosphate 3 epimerase (rpe) K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D HP_0112 predicted coding region HP0112 K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:hpy00051] D HP_1275 phosphomannomutase (algC){Pseudomonas aeruginosa} K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HP_0043 mannose-6-phosphate isomerase (pmi) or (algA) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HP_0044 GDP-D-mannose dehydratase (rfbD) K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HP_0045 nodulation protein (nolK) K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D HP_0112 predicted coding region HP0112 K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D HP_1385 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D HP_0176 fructose-bisphosphate aldolase (tsr) K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HP_0194 triosephosphate isomerase (tpi) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D HP_0574 galactosidase acetyltransferase (lacA) K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] C 00052 Galactose metabolism [PATH:hpy00052] D HP_0360 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HP_0646 UDP-glucose pyrophosphorylase (galU) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HP_1275 phosphomannomutase (algC){Pseudomonas aeruginosa} K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HP_1103 glucokinase (glk) K00845 glk; glucokinase [EC:2.7.1.2] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:hpy00500] D HP_0646 UDP-glucose pyrophosphorylase (galU) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HP_1275 phosphomannomutase (algC){Pseudomonas aeruginosa} K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HP_1103 glucokinase (glk) K00845 glk; glucokinase [EC:2.7.1.2] D HP_1166 glucose-6-phosphate isomerase (pgi) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:hpy00520] D HP_1532 glucosamine fructose-6-phosphate aminotransferase (isomerizing) (glmS) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HP_0075 urease protein (ureC) K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D HP_0683 UDP-N-acetylglucosamine pyrophosphorylase (glmU) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HP_0648 UDP-N-acetylglucosamine enolpyruvyl transferase (murZ) K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HP_1418 UDP-N-acetylenolpyruvoylglucosamine reductase (murB) K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HP_0840 flaA1 protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D HP_0366 spore coat polysaccharide biosynthesis protein C K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92] D HP_0327 flagellar protein G (flaG) K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202] D HP_0326 CMP-N-acetylneuraminic acid synthetase (neuA) K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D HP_0178 spore coat polysaccharide biosynthesis protein E K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] D HP_1103 glucokinase (glk) K00845 glk; glucokinase [EC:2.7.1.2] D HP_1275 phosphomannomutase (algC){Pseudomonas aeruginosa} K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HP_0646 UDP-glucose pyrophosphorylase (galU) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HP_0360 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HP_1166 glucose-6-phosphate isomerase (pgi) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HP_0043 mannose-6-phosphate isomerase (pmi) or (algA) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HP_0044 GDP-D-mannose dehydratase (rfbD) K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HP_0045 nodulation protein (nolK) K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] C 00620 Pyruvate metabolism [PATH:hpy00620] D HP_1045 acetyl-CoA synthetase (acoE) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HP_1110 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HP_1111 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HP_1108 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HP_1109 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HP_0589 ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HP_0590 ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HP_1104 cinnamyl-alcohol dehydrogenase ELI3-2 (cad) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D HP_0557 acetyl-coenzyme A carboxylase (accA) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HP_0371 biotin carboxyl carrier protein (fabE) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HP_0370 biotin carboxylase (accC) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HP_0950 acetyl-CoA carboxylase beta subunit (accD) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HP_1222 D-lactate dehydrogenase (dld) K18930 dld; D-lactate dehydrogenase D HP_0086 conserved hypothetical protein K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D HP_1325 fumarase (fumC) K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D HP_0192 fumarate reductase, flavoprotein subunit (frdA) K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D HP_0191 fumarate reductase, iron-sulfur subunit (frdB) K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D HP_0193 fumarate reductase, cytochrome b subunit (frdC) K25996 frdC; succinate dehydrogenase subunit C D HP_0121 phosphoenolpyruvate synthase (ppsA) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:hpy00630] D HP_1045 acetyl-CoA synthetase (acoE) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HP_0026 citrate synthase (gltA) K01647 CS; citrate synthase [EC:2.3.3.1] D HP_0779 aconitase B (acnB) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HP_0509 glycolate oxidase subunit (glcD) K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D HP_0485 catalase-like protein K03781 katE; catalase [EC:1.11.1.6] D HP_0875 catalase K03781 katE; catalase [EC:1.11.1.6] D HP_0512 glutamine synthetase (glnA) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HP_0183 serine hydroxymethyltransferase (glyA) K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HP_1099 2-keto-3-deoxy-6-phosphogluconate aldolase (eda) K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D HP_1434 formyltetrahydrofolate hydrolase (purU) K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D HP_1238 aliphatic amidase (aimE) K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00640 Propanoate metabolism [PATH:hpy00640] D HP_1045 acetyl-CoA synthetase (acoE) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HP_1110 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HP_1111 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HP_1108 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HP_1109 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HP_0557 acetyl-coenzyme A carboxylase (accA) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HP_0371 biotin carboxyl carrier protein (fabE) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HP_0370 biotin carboxylase (accC) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HP_0950 acetyl-CoA carboxylase beta subunit (accD) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HP_0779 aconitase B (acnB) K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] C 00650 Butanoate metabolism [PATH:hpy00650] D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HP_0192 fumarate reductase, flavoprotein subunit (frdA) K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D HP_0191 fumarate reductase, iron-sulfur subunit (frdB) K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D HP_0193 fumarate reductase, cytochrome b subunit (frdC) K25996 frdC; succinate dehydrogenase subunit C D HP_1110 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HP_1111 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HP_1108 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HP_1109 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HP_0589 ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11] D HP_0590 ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11] D HP_0691 3-oxoadipate coA-transferase subunit A (yxjD) K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D HP_0692 3-oxoadipate coA-transferase subunit B (yxjE) K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] C 00660 C5-Branched dibasic acid metabolism C 00562 Inositol phosphate metabolism D HP_0194 triosephosphate isomerase (tpi) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:hpy00190] D HP_1260 NADH-ubiquinone oxidoreductase, NQO7 subunit (NQO7) K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D HP_1261 NADH-ubiquinone oxidoreductase, NQO6 subunit (NQO6) K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D HP_1262 NADH-ubiquinone oxidoreductase, NQO5 subunit (NQO5) K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D HP_1263 NADH-ubiquinone oxidoreductase, NQO4 subunit (NQO4) K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D HP_1264 predicted coding region HP1264 K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D HP_1265 predicted coding region HP1265 K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D HP_1266 NADH-ubiquinone oxidoreductase, NQO3 subunit (NQO3) K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D HP_1267 NADH-ubiquinone oxidoreductase, NQO8 subunit (NQO8) K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D HP_1268 NADH-ubiquinone oxidoreductase, NQO9 subunit (NQO9) K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D HP_1269 NADH-ubiquinone oxidoreductase, NQO10 subunit (NQO10) K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D HP_1270 NADH-ubiquinone oxidoreductase, NQO11 subunit (NQO11) K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D HP_1271 NADH-ubiquinone oxidoreductase, NQO12 subunit (NQO12) K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D HP_1272 NADH-ubiquinone oxidoreductase, NQO13 subunit (NQO13) K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D HP_1273 NADH-ubiquinone oxidoreductase, NQO14 subunit (NQO14) K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D HP_0192 fumarate reductase, flavoprotein subunit (frdA) K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D HP_0191 fumarate reductase, iron-sulfur subunit (frdB) K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D HP_0193 fumarate reductase, cytochrome b subunit (frdC) K25996 frdC; succinate dehydrogenase subunit C D HP_1540 ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit (fbcF) K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D HP_1539 ubiquinol cytochrome c oxidoreductase, cytochrome b subunit (fbcH) K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HP_0144 cytochrome c oxidase, heme b and copper-binding subunit, membrane-bound (fixN) K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D HP_0145 cytochrome c oxidase, monoheme subunit, membrane-bound (fixO) K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D HP_0146 cbb3-type cytochrome c oxidase subunit Q (CcoQ) K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D HP_0147 cytochrome c oxidase, diheme subunit, membrane-bound (fixP) K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D HP_1134 ATP synthase F1, subunit alpha (atpA) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HP_1132 ATP synthase F1, subunit beta (atpD) K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HP_1133 ATP synthase F1, subunit gamma (atpG) K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HP_1135 ATP synthase F1, subunit delta (atpH) K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HP_1131 ATP synthase F1, subunit epsilon (atpC) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HP_0828 ATP synthase F0, subunit a (atpB) K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HP_1136 ATP synthase F0, subunit b (atpF) K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HP_1137 ATP synthase F0, subunit b' (atpF') K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HP_1212 ATP synthase F0, subunit c (atpE) K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HP_0620 inorganic pyrophosphatase (ppa) K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D HP_1010 polyphosphate kinase (ppk) K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:hpy00680] D HP_0183 serine hydroxymethyltransferase (glyA) K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HP_0154 enolase (eno) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HP_0176 fructose-bisphosphate aldolase (tsr) K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D HP_1385 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D HP_0407 biotin sulfoxide reductase (bisC) K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D HP_1045 acetyl-CoA synthetase (acoE) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HP_1110 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HP_1111 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HP_1108 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HP_1109 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D HP_0121 phosphoenolpyruvate synthase (ppsA) K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D HP_0974 phosphoglycerate mutase (pgm) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HP_0397 phosphoglycerate dehydrogenase (serA) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HP_0652 phosphoserine phosphatase (serB) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:hpy00910] D HP_1238 aliphatic amidase (aimE) K01455 E3.5.1.49; formamidase [EC:3.5.1.49] D HP_0773 predicted coding region HP0773 K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D HP_0380 glutamate dehydrogenase (gdhA) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HP_0512 glutamine synthetase (glnA) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HP_0004 carbonic anhydrase (icfA) K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D HP_1186 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:hpy00920] D HP_1210 serine acetyltransferase (cysE) K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HP_0107 cysteine synthetase (cysK) K01738 cysK; cysteine synthase [EC:2.5.1.47] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:hpy00061] D HP_0557 acetyl-coenzyme A carboxylase (accA) K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D HP_0371 biotin carboxyl carrier protein (fabE) K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D HP_0370 biotin carboxylase (accC) K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D HP_0950 acetyl-CoA carboxylase beta subunit (accD) K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D HP_0559 acyl carrier protein (acpP) K02078 acpP; acyl carrier protein D HP_0962 acyl carrier protein (acpP) K02078 acpP; acyl carrier protein D HP_0090 malonyl coenzyme A-acyl carrier protein transacylase (fabD) K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HP_0202 beta-ketoacyl-acyl carrier protein synthase III (fabH) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HP_0558 beta ketoacyl-acyl carrier protein synthase II (fabF) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HP_0561 3-ketoacyl-acyl carrier protein reductase (fabG) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HP_1376 (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (fabZ) K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HP_0195 enoyl-(acyl-carrier-protein) reductase (NADH) (fabI) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:hpy00071] D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis [PATH:hpy00121] D HP_1014 7-alpha-hydroxysteroid dehydrogenase (hdhA) K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159] C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:hpy00561] D HP_1104 cinnamyl-alcohol dehydrogenase ELI3-2 (cad) K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2] D HP_0201 fatty acid/phospholipid synthesis protein (plsX) K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D HP_1509 conserved hypothetical integral membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HP_1348 1-acyl-glycerol-3-phosphate acyltransferase (plsC) K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HP_0700 diacylglycerol kinase (dgkA) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] C 00564 Glycerophospholipid metabolism [PATH:hpy00564] D HP_0961 glycerol-3-phosphate dehydrogenase, NAD(P)+ dependent K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D HP_1509 conserved hypothetical integral membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HP_1348 1-acyl-glycerol-3-phosphate acyltransferase (plsC) K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D HP_0700 diacylglycerol kinase (dgkA) K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D HP_0499 phospholipase A1 precursor (DR-phospholipase A) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D HP_0871 CDP-diglyceride hydrolase (cdh) K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D HP_0215 CDP-diglyceride synthetase (cdsA) K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D HP_1071 phosphatidylserine synthase (pssA) K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D HP_1357 phosphatidylserine decarboxylase proenzyme (psd) K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D HP_1016 phosphatidylglycerophosphate synthase (pgsA) K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D HP_0737 conserved hypothetical integral membrane protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] C 00565 Ether lipid metabolism [PATH:hpy00565] D HP_0499 phospholipase A1 precursor (DR-phospholipase A) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D HP_0499 phospholipase A1 precursor (DR-phospholipase A) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D HP_0499 phospholipase A1 precursor (DR-phospholipase A) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:hpy00592] D HP_0499 phospholipase A1 precursor (DR-phospholipase A) K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:hpy00230] D HP_1179 phosphopentomutase (deoB) K01839 deoB; phosphopentomutase [EC:5.4.2.7] D HP_1275 phosphomannomutase (algC){Pseudomonas aeruginosa} K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D HP_0742 phosphoribosylpyrophosphate synthetase (prsA) K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D HP_1218 glycinamide ribonucleotide synthetase (purD) K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D HP_1112 adenylosuccinate lyase (purB) K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HP_0572 adenine phosphoribosyltransferase (apt) K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HP_0930 stationary-phase survival protein (surE) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HP_1178 purine-nucleoside phosphorylase (deoD) K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HP_0829 inosine-5'-monophosphate dehydrogenase (guaB) K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HP_0198 nucleoside diphosphate kinase (ndk) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HP_0735 xanthine guanine phosphoribosyl transferase (gpt) K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D HP_0409 GMP synthase (guaA) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HP_0854 GMP reductase (guaC) K00364 guaC; GMP reductase [EC:1.7.1.7] D HP_0321 5'-guanylate kinase (gmk) K00942 gmk; guanylate kinase [EC:2.7.4.8] D HP_0680 ribonucleoside-diphosphate reductase 1 alpha subunit (nrdA) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HP_0364 ribonucleoside diphosphate reductase, beta subunit (nrdB) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HP_0775 penta-phosphate guanosine-3'-pyrophosphohydrolase (spoT) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HP_0278 guanosine pentaphosphate phosphohydrolase (gppA) K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D HP_0255 adenylosuccinate synthetase (purA) K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HP_0104 2',3'-cyclic-nucleotide 2'-phosphodiesterase (cpdB) K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D HP_0618 adenylate kinase (adk) K00939 adk; adenylate kinase [EC:2.7.4.3] D HP_0741 conserved hypothetical protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53] D HP_0072 urease beta subunit (urea amidohydrolase) (ureB) K01428 ureC; urease subunit alpha [EC:3.5.1.5] D HP_0073 urease alpha subunit (ureA) (urea amidohydrolase) K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:hpy00240] D HP_0919 carbamoyl-phosphate synthase (glutamine-hydrolysing) (pyrAb) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HP_1237 carbamoyl-phosphate synthetase (pyrAa) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HP_1084 aspartate transcarbamoylase (pyrB) K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HP_0266 dihydroorotase (pyrC) K01465 URA4; dihydroorotase [EC:3.5.2.3] D HP_0581 dihydroorotase (pyrC) K01465 URA4; dihydroorotase [EC:3.5.2.3] D HP_1011 dihydroorotate dehydrogenase (pyrD) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D HP_1257 orotate phosphoribosyltransferase (pyrE) K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D HP_0005 orotidine 5'-phosphate decarboxylase (pyrF) K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D HP_0777 uridine 5'-monophosphate (UMP) kinase (pyrH) K09903 pyrH; uridylate kinase [EC:2.7.4.22] D HP_0198 nucleoside diphosphate kinase (ndk) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HP_1240 conserved hypothetical protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D HP_0349 CTP synthetase (pyrG) K01937 pyrG; CTP synthase [EC:6.3.4.2] D HP_0930 stationary-phase survival protein (surE) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HP_0104 2',3'-cyclic-nucleotide 2'-phosphodiesterase (cpdB) K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D HP_0372 deoxycytidine triphosphate deaminase (dcd) K01494 dcd; dCTP deaminase [EC:3.5.4.13] D HP_0680 ribonucleoside-diphosphate reductase 1 alpha subunit (nrdA) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HP_0364 ribonucleoside diphosphate reductase, beta subunit (nrdB) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D HP_1474 thymidylate kinase (tmk) K00943 tmk; dTMP kinase [EC:2.7.4.9] D HP_0865 deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HP_1533 conserved hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D HP_0357 short chain alcohol dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:hpy00250] D HP_0672 solute-binding signature and mitochondrial signature protein (aspB) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HP_0723 L-asparaginase II (ansB) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HP_1398 alanine dehydrogenase (ald) K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D HP_0649 aspartate ammonia-lyase (aspA) K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D HP_0255 adenylosuccinate synthetase (purA) K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D HP_1112 adenylosuccinate lyase (purB) K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D HP_1084 aspartate transcarbamoylase (pyrB) K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D HP_0380 glutamate dehydrogenase (gdhA) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HP_0056 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HP_0512 glutamine synthetase (glnA) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HP_0919 carbamoyl-phosphate synthase (glutamine-hydrolysing) (pyrAb) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HP_1237 carbamoyl-phosphate synthetase (pyrAa) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HP_1532 glucosamine fructose-6-phosphate aminotransferase (isomerizing) (glmS) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:hpy00260] D HP_1229 aspartokinase (lysC) K00928 lysC; aspartate kinase [EC:2.7.2.4] D HP_1189 aspartate-semialdehyde dehydrogenase (asd) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HP_0822 homoserine dehydrogenase (metL) K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HP_1050 homoserine kinase (thrB) K00872 thrB; homoserine kinase [EC:2.7.1.39] D HP_0098 threonine synthase (thrC) K01733 thrC; threonine synthase [EC:4.2.3.1] D HP_0183 serine hydroxymethyltransferase (glyA) K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HP_0974 phosphoglycerate mutase (pgm) K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D HP_0397 phosphoglycerate dehydrogenase (serA) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HP_0652 phosphoserine phosphatase (serB) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D HP_0357 short chain alcohol dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D HP_1071 phosphatidylserine synthase (pssA) K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D HP_0132 L-serine deaminase (sdaA) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HP_1277 tryptophan synthase, alpha subunit (trpA) K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HP_1278 tryptophan synthase, beta subunit (trpB) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:hpy00270] D HP_1210 serine acetyltransferase (cysE) K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D HP_0107 cysteine synthetase (cysK) K01738 cysK; cysteine synthase [EC:2.5.1.47] D HP_0106 cystathionine gamma-synthase (metB) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D HP_0197 S-adenosylmethionine synthetase 2 (metX) K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HP_0832 spermidine synthase (speE) K00797 speE; spermidine synthase [EC:2.5.1.16] D HP_0089 pfs protein (pfs) K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30] D HP_0051 cytosine specific DNA methyltransferase (DDEM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_0054 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_1121 cytosine specific DNA methyltransferase (BSP6IM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_0105 conserved hypothetical protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HP_1229 aspartokinase (lysC) K00928 lysC; aspartate kinase [EC:2.7.2.4] D HP_1189 aspartate-semialdehyde dehydrogenase (asd) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HP_0822 homoserine dehydrogenase (metL) K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HP_1468 branched-chain-amino-acid aminotransferase (ilvE) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HP_0672 solute-binding signature and mitochondrial signature protein (aspB) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HP_0132 L-serine deaminase (sdaA) K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D HP_0397 phosphoglycerate dehydrogenase (serA) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:hpy00280] D HP_1468 branched-chain-amino-acid aminotransferase (ilvE) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HP_0691 3-oxoadipate coA-transferase subunit A (yxjD) K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5] D HP_0692 3-oxoadipate coA-transferase subunit B (yxjE) K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5] D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:hpy00290] D HP_0330 ketol-acid reductoisomerase (ilvC) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HP_1468 branched-chain-amino-acid aminotransferase (ilvE) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00300 Lysine biosynthesis [PATH:hpy00300] D HP_0822 homoserine dehydrogenase (metL) K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D HP_1229 aspartokinase (lysC) K00928 lysC; aspartate kinase [EC:2.7.2.4] D HP_1189 aspartate-semialdehyde dehydrogenase (asd) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HP_1013 dihydrodipicolinate synthetase (dapA) K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HP_0510 dihydrodipicolinate reductase (dapB) K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D HP_0626 tetrahydrodipicolinate N-succinyltransferase (dapD) K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D HP_0212 succinyl-diaminopimelate desuccinylase (dapE) K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D HP_0566 diaminopimelate epimerase (dapF) K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HP_0290 diaminopimelate decarboxylase (dap decarboxylase) (lysA) K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HP_1494 UDP-MurNac-tripeptide synthetase (murE) K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HP_0740 UDP-MurNac-pentapeptide presynthetase (murF) K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00220 Arginine biosynthesis [PATH:hpy00220] D HP_1399 arginase (rocF) K01476 rocF; arginase [EC:3.5.3.1] D HP_0072 urease beta subunit (urea amidohydrolase) (ureB) K01428 ureC; urease subunit alpha [EC:3.5.1.5] D HP_0073 urease alpha subunit (ureA) (urea amidohydrolase) K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D HP_0512 glutamine synthetase (glnA) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HP_0919 carbamoyl-phosphate synthase (glutamine-hydrolysing) (pyrAb) K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D HP_1237 carbamoyl-phosphate synthetase (pyrAa) K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D HP_0380 glutamate dehydrogenase (gdhA) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D HP_0672 solute-binding signature and mitochondrial signature protein (aspB) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:hpy00330] D HP_0422 arginine decarboxylase (speA) K01585 speA; arginine decarboxylase [EC:4.1.1.19] D HP_0049 predicted coding region HP0049 K10536 aguA; agmatine deiminase [EC:3.5.3.12] D HP_0757 beta-alanine synthetase homolog K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53] D HP_0832 spermidine synthase (speE) K00797 speE; spermidine synthase [EC:2.5.1.16] D HP_0020 carboxynorspermidine decarboxylase (nspC) K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96] D HP_0294 aliphatic amidase (aimE) K01426 E3.5.1.4; amidase [EC:3.5.1.4] D HP_1399 arginase (rocF) K01476 rocF; arginase [EC:3.5.3.1] D HP_1158 pyrroline-5-carboxylate reductase (proC) K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D HP_0056 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HP_0672 solute-binding signature and mitochondrial signature protein (aspB) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D HP_0672 solute-binding signature and mitochondrial signature protein (aspB) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism [PATH:hpy00360] D HP_0672 solute-binding signature and mitochondrial signature protein (aspB) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HP_0943 D-amino acid dehydrogenase (dadA) K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D HP_0294 aliphatic amidase (aimE) K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00380 Tryptophan metabolism [PATH:hpy00380] D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HP_0294 aliphatic amidase (aimE) K01426 E3.5.1.4; amidase [EC:3.5.1.4] D HP_0485 catalase-like protein K03781 katE; catalase [EC:1.11.1.6] D HP_0875 catalase K03781 katE; catalase [EC:1.11.1.6] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:hpy00400] D HP_0134 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (dhs1) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HP_0283 3-dehydroquinate synthase (aroB) K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D HP_1038 3-dehydroquinase type II (aroQ) K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D HP_1249 shikimate 5-dehydrogenase (aroE) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D HP_0157 shikimic acid kinase I (aroK) K00891 aroK; shikimate kinase [EC:2.7.1.71] D HP_0401 3-phosphoshikimate 1-carboxyvinyltransferase (aroA) K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D HP_0663 chorismate synthase (aroC) K01736 aroC; chorismate synthase [EC:4.2.3.5] D HP_1282 anthranilate synthase component I (trpE) K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HP_1281 anthranilate synthase component II (trpD) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HP_0276 predicted coding region HP0276 K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D HP_1279 anthranilate isomerase (trpC) K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D HP_1277 tryptophan synthase, alpha subunit (trpA) K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D HP_1278 tryptophan synthase, beta subunit (trpB) K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D HP_0291 predicted coding region HP0291 K04093 pheA1; chorismate mutase [EC:5.4.99.5] D HP_1380 prephenate dehydrogenase (tyrA) K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HP_0672 solute-binding signature and mitochondrial signature protein (aspB) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:hpy00410] D HP_0034 aspartate 1-decarboxylase (panD) K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D HP_0006 pantoate-beta-alanine ligase (panC) K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] C 00430 Taurine and hypotaurine metabolism [PATH:hpy00430] D HP_1118 gamma-glutamyltranspeptidase (ggt) K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HP_1398 alanine dehydrogenase (ald) K00259 ald; alanine dehydrogenase [EC:1.4.1.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:hpy00450] D HP_0106 cystathionine gamma-synthase (metB) K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D HP_0825 thioredoxin reductase (trxB) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HP_1164 thioredoxin reductase (trxB) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D HP_1513 selenocysteine synthase SelA, putative K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D HP_0417 methionyl-tRNA synthetase (metS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:hpy00460] D HP_1118 gamma-glutamyltranspeptidase (ggt) K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HP_0723 L-asparaginase II (ansB) K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D HP_0183 serine hydroxymethyltransferase (glyA) K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HP_1238 aliphatic amidase (aimE) K01455 E3.5.1.49; formamidase [EC:3.5.1.49] C 00470 D-Amino acid metabolism [PATH:hpy00470] D HP_0941 alanine racemase, biosynthetic (alr) K01775 alr; alanine racemase [EC:5.1.1.1] D HP_0738 D-alanine:D-alanine ligase A (ddlA) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HP_0549 glutamate racemase (glr) K01776 murI; glutamate racemase [EC:5.1.1.3] D HP_0494 UDP-N-acetylmuramoylalanine-D-glutamate ligase (murD) K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HP_0566 diaminopimelate epimerase (dapF) K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D HP_0290 diaminopimelate decarboxylase (dap decarboxylase) (lysA) K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D HP_0943 D-amino acid dehydrogenase (dadA) K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:hpy00480] D HP_1118 gamma-glutamyltranspeptidase (ggt) K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HP_0570 aminopeptidase a/i (pepA) K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HP_0027 isocitrate dehydrogenase (icd) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D HP_1101 glucose-6-phosphate dehydrogenase (g6pD) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D HP_0832 spermidine synthase (speE) K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:hpy00540] D HP_1375 UDP-N-acetylglucosamine acyltransferase (lpxA) K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D HP_1052 UDP-3-0-acyl N-acetylglcosamine deacetylase (envA) K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D HP_0196 UDP-3-0-(3-hydroxymyristoyl) glucosamine N-acyltransferase (lpxD) K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D HP_0394 predicted coding region HP0394 K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D HP_0867 lipid A disaccharide synthetase (lpxB) K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D HP_0328 conserved hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D HP_1429 polysialic acid capsule expression protein (kpsF) K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D HP_0003 3-deoxy-d-manno-octulosonic acid 8-phosphate synthetase (kdsA) K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D HP_1570 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D HP_0230 CTP:CMP-3-deoxy-D-manno-octulosonate-cytidylyl-transferase (kdsB) K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D HP_0957 3-deoxy-d-manno-octulosonic-acid transferase (kdtA) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D HP_0280 heat shock protein B (ibpB) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D HP_0022 conserved hypothetical integral membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D HP_0021 predicted coding region HP0021 K12977 lpxE; lipid A 1-phosphatase [EC:3.1.3.-] D HP_0579 predicted coding region HP0579 K23082 kdoH1; 3-deoxy-D-manno-octulosonic acid-hydrolase [EC:3.2.1.144] D HP_0580 predicted coding region HP0580 K23083 kdoH2; 3-deoxy-D-manno-octulosonic acid-hydrolase D HP_1580 predicted coding region HP1580 K23159 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D HP_0857 phosphoheptose isomerase (gmhA) K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D HP_0858 ADP-heptose synthase (rfaE) K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D HP_0860 conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D HP_0859 ADP-L-glycero-D-mannoheptose-6-epimerase (rfaD) K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D HP_0279 lipopolysaccharide heptosyltransferase-1 (rfaC) K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D HP_1191 ADP-heptose-lps heptosyltransferase II (rfaF) K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D HP_0159 lipopolysaccharide 1,2-glucosyltransferase (rfaJ) K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D HP_1416 lipopolysaccharide 1,2-glucosyltransferase (rfaJ) K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D HP_1039 predicted coding region HP1039 K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:hpy00541] D HP_0646 UDP-glucose pyrophosphorylase (galU) K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D HP_0360 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D HP_0043 mannose-6-phosphate isomerase (pmi) or (algA) K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D HP_0044 GDP-D-mannose dehydratase (rfbD) K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D HP_0045 nodulation protein (nolK) K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D HP_0683 UDP-N-acetylglucosamine pyrophosphorylase (glmU) K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D HP_0840 flaA1 protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D HP_0366 spore coat polysaccharide biosynthesis protein C K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92] D HP_0327 flagellar protein G (flaG) K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202] D HP_0326 CMP-N-acetylneuraminic acid synthetase (neuA) K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D HP_0178 spore coat polysaccharide biosynthesis protein E K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97] C 00550 Peptidoglycan biosynthesis [PATH:hpy00550] D HP_0648 UDP-N-acetylglucosamine enolpyruvyl transferase (murZ) K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HP_1418 UDP-N-acetylenolpyruvoylglucosamine reductase (murB) K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HP_0623 UDP-N-acetylmuramate-alanine ligase (murC) K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HP_0494 UDP-N-acetylmuramoylalanine-D-glutamate ligase (murD) K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HP_1494 UDP-MurNac-tripeptide synthetase (murE) K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HP_0738 D-alanine:D-alanine ligase A (ddlA) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HP_0740 UDP-MurNac-pentapeptide presynthetase (murF) K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HP_1221 conserved hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HP_0851 conserved hypothetical integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HP_0493 phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HP_1155 transferase, peptidoglycan synthesis (murG) K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HP_0597 penicillin-binding protein 1A (PBP-1A) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HP_1565 penicillin-binding protein 2 (pbp2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HP_1556 cell division protein (ftsI) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis [PATH:hpy00552] D HP_0851 conserved hypothetical integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:hpy00543] D HP_0855 alginate O-acetylation protein (algI) K19294 algI; alginate O-acetyltransferase complex protein AlgI D HP_1210 serine acetyltransferase (cysE) K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:hpy00730] D HP_0844 thiamine biosynthesis protein (thi) K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D HP_0220 synthesis of [Fe-S] cluster (nifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HP_0354 deoxyxylulose-5-phosphate synthase, putative (dxs) K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HP_0845 thiamin phosphate pyrophosphorylase/hyroxyethylthiazole kinase (thiM) K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D HP_0843 thiamin phosphate pyrophosphorylase/hyroxyethylthiazole kinase (thiB) K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D HP_1291 conserved hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2] D HP_0618 adenylate kinase (adk) K00939 adk; adenylate kinase [EC:2.7.4.3] D HP_1287 transcriptional regulator (tenA) K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 00740 Riboflavin metabolism [PATH:hpy00740] D HP_0802 GTP cyclohydrolase II (ribA) K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D HP_0804 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (ribA, ribB) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HP_1505 riboflavin biosynthesis protein (ribG) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HP_0002 riboflavin synthase beta chain (ribE) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D HP_1574 riboflavin synthase alpha subunit (ribC) K00793 ribE; riboflavin synthase [EC:2.5.1.9] D HP_1087 riboflavin biosynthesis regulatory protein (ribC) K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D HP_0845 thiamin phosphate pyrophosphorylase/hyroxyethylthiazole kinase (thiM) K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D HP_1476 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:hpy00750] D HP_1583 pyridoxal phosphate biosynthetic protein A (pdxA) K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D HP_1582 pyridoxal phosphate biosynthetic protein J (pdxJ) K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D HP_0098 threonine synthase (thrC) K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:hpy00760] D HP_1356 quinolinate synthetase A (nadA) K03517 nadA; quinolinate synthase [EC:2.5.1.72] D HP_1355 nicotinate-nucleotide pyrophosphorylase (nadC) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D HP_1178 purine-nucleoside phosphorylase (deoD) K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D HP_0930 stationary-phase survival protein (surE) K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D HP_1337 conserved hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D HP_0329 NH(3)-dependent NAD+ synthetase (nadE) K01916 nadE; NAD+ synthase [EC:6.3.1.5] D HP_0952 conserved hypothetical integral membrane protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D HP_1394 conserved hypothetical protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:hpy00770] D HP_0330 ketol-acid reductoisomerase (ilvC) K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D HP_1058 3-methyl-2-oxobutanoate hydroxymethyltransferase (panB) K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D HP_0006 pantoate-beta-alanine ligase (panC) K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D HP_0862 predicted coding region HP0862 K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D HP_0841 pantothenate metabolism flavoprotein (dfp) K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D HP_1475 lipopolysaccharide core biosynthesis protein (kdtB) K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D HP_0831 conserved hypothetical ATP binding protein K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D HP_0808 holo-acp synthase (acpS) K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D HP_1468 branched-chain-amino-acid aminotransferase (ilvE) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HP_0034 aspartate 1-decarboxylase (panD) K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:hpy00780] D HP_1254 biotin synthesis protein (bioC) K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D HP_0558 beta ketoacyl-acyl carrier protein synthase II (fabF) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HP_0561 3-ketoacyl-acyl carrier protein reductase (fabG) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HP_1376 (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (fabZ) K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HP_0195 enoyl-(acyl-carrier-protein) reductase (NADH) (fabI) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HP_0598 8-amino-7-oxononanoate synthase (bioF) K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D HP_0976 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA) K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D HP_0029 dethiobiotin synthetase (bioD) K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D HP_1406 biotin synthetase (bioB) K01012 bioB; biotin synthase [EC:2.8.1.6] D HP_1140 biotin operon repressor/biotin acetyl coenzyme A carboxylase synthetase (birA) K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:hpy00790] D HP_0928 GTP cyclohydrolase I (folE) K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D HP_0959 conserved hypothetical protein K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16] D HP_1510 conserved hypothetical protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D HP_1036 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (folK) K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D HP_1232 dihydropteroate synthase (folP) K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D HP_1545 folylpolyglutamate synthase (folC) K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D HP_0802 GTP cyclohydrolase II (ribA) K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D HP_0804 GTP cyclohydrolase II/3,4-dihydroxy-2-butanone 4-phosphate synthase (ribA, ribB) K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D HP_0293 para-aminobenzoate synthetase (pabB) K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D HP_0933 predicted coding region HP0933 K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D HP_0934 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D HP_0639 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HP_1413 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D HP_0768 molybdenum cofactor biosynthesis protein A (moaA) K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HP_0798 molybdenum cofactor biosynthesis protein C (moaC) K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HP_0800 molybdopterin converting factor, subunit 2 (moaE) K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HP_0799 molybdopterin biosynthesis protein (mog) K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D HP_0172 molybdopterin biosynthesis protein (moeA) K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D HP_0769 molybdopterin-guanine dinucleotide biosynthesis protein A (mobA) K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:hpy00670] D HP_0577 methylene-tetrahydrofolate dehydrogenase (folD) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D HP_0183 serine hydroxymethyltransferase (glyA) K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D HP_1141 methionyl-tRNA formyltransferase (fmt) K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HP_1533 conserved hypothetical protein K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D HP_1434 formyltetrahydrofolate hydrolase (purU) K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D HP_0761 predicted coding region HP0761 K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:hpy00860] D HP_0476 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0643 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0239 glutamyl-tRNA reductase (hemA) K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D HP_0306 glutamate-1-semialdehyde 2,1-aminomutase (hemL) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D HP_0163 delta-aminolevulinic acid dehydratase (hemB) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HP_0237 porphobilinogen deaminase (hemC) K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D HP_1224 uroporphyrinogen III cosynthase (hemD) K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D HP_0604 uroporphyrinogen decarboxylase (hemE) K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D HP_0665 oxygen-independent coproporphyrinogen III oxidase (hemN) K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D HP_1484 conserved hypothetical integral membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D HP_0376 ferrochelatase (hemH) K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D HP_0318 conserved hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:hpy00130] D HP_1360 4-hydroxybenzoate octaprenyltransferase (ubiA) K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D HP_0396 conserved hypothetical protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D HP_1476 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D HP_1483 gerC2 protein (gerC2) K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D HP_0778 predicted coding region HP0778 K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D HP_0654 conserved hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D HP_0267 chlorohydrolase K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40] D HP_0089 pfs protein (pfs) K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30] D HP_0656 conserved hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D HP_0152 predicted coding region HP0152 K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:hpy00900] D HP_0354 deoxyxylulose-5-phosphate synthase, putative (dxs) K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D HP_0216 conserved hypothetical protein K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D HP_1020 conserved hypothetical protein K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12] D HP_1443 conserved hypothetical protein K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D HP_0625 protein E (gcpE) K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D HP_0400 penicillin tolerance protein (lytB) K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HP_1476 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D HP_0929 geranyltranstransferase (ispA) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D HP_0240 octaprenyl-diphosphate synthase (ispB) K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D HP_1221 conserved hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D HP_1088 transketolase A (tktA) K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:hpy00261] D HP_1229 aspartokinase (lysC) K00928 lysC; aspartate kinase [EC:2.7.2.4] D HP_1189 aspartate-semialdehyde dehydrogenase (asd) K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D HP_1013 dihydrodipicolinate synthetase (dapA) K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D HP_0510 dihydrodipicolinate reductase (dapB) K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:hpy00521] D HP_1103 glucokinase (glk) K00845 glk; glucokinase [EC:2.7.1.2] D HP_1275 phosphomannomutase (algC){Pseudomonas aeruginosa} K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D HP_1103 glucokinase (glk) K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis [PATH:hpy00401] D HP_1380 prephenate dehydrogenase (tyrA) K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D HP_0672 solute-binding signature and mitochondrial signature protein (aspB) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D HP_1282 anthranilate synthase component I (trpE) K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HP_1281 anthranilate synthase component II (trpD) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D HP_0090 malonyl coenzyme A-acyl carrier protein transacylase (fabD) K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HP_0561 3-ketoacyl-acyl carrier protein reductase (fabG) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HP_0195 enoyl-(acyl-carrier-protein) reductase (NADH) (fabI) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D HP_0559 acyl carrier protein (acpP) K02078 acpP; acyl carrier protein D HP_0962 acyl carrier protein (acpP) K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:hpy00999] D HP_0197 S-adenosylmethionine synthetase 2 (metX) K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D HP_1249 shikimate 5-dehydrogenase (aroE) K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:hpy00362] D HP_0924 4-oxalocrotonate tautomerase (dmpI) K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:hpy00627] D HP_0294 aliphatic amidase (aimE) K01426 E3.5.1.4; amidase [EC:3.5.1.4] D HP_1476 phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation D HP_0924 4-oxalocrotonate tautomerase (dmpI) K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation D HP_1110 pyruvate ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D HP_1111 pyruvate ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D HP_1108 pyruvate ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D HP_1109 pyruvate ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00642 Ethylbenzene degradation C 00643 Styrene degradation [PATH:hpy00643] D HP_0294 aliphatic amidase (aimE) K01426 E3.5.1.4; amidase [EC:3.5.1.4] C 00791 Atrazine degradation D HP_0072 urease beta subunit (urea amidohydrolase) (ureB) K01428 ureC; urease subunit alpha [EC:3.5.1.5] D HP_0073 urease alpha subunit (ureA) (urea amidohydrolase) K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation D HP_0924 4-oxalocrotonate tautomerase (dmpI) K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:hpy03020] D HP_1198 DNA-directed RNA polymerase, beta subunit (rpoB) K13797 rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6] D HP_1293 DNA-directed RNA polymerase, alpha subunit (rpoA) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HP_0776 predicted coding region HP0776 K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:hpy03010] D HP_0399 ribosomal protein S1 (rps1) K02945 RP-S1; small subunit ribosomal protein S1 D HP_1554 ribosomal protein S2 (rps2) K02967 RP-S2; small subunit ribosomal protein S2 D HP_1313 ribosomal protein S3 (rps3) K02982 RP-S3; small subunit ribosomal protein S3 D HP_1294 ribosomal protein S4 (rps4) K02986 RP-S4; small subunit ribosomal protein S4 D HP_1302 ribosomal protein S5 (rps5) K02988 RP-S5; small subunit ribosomal protein S5 D HP_1246 ribosomal protein S6 (rps6) K02990 RP-S6; small subunit ribosomal protein S6 D HP_1196 ribosomal protein S7 (rps7) K02992 RP-S7; small subunit ribosomal protein S7 D HP_1305 ribosomal protein S8 (rps8) K02994 RP-S8; small subunit ribosomal protein S8 D HP_0083 ribosomal protein S9 (rps9) K02996 RP-S9; small subunit ribosomal protein S9 D HP_1320 ribosomal protein S10 (rps10) K02946 RP-S10; small subunit ribosomal protein S10 D HP_1295 ribosomal protein S11 (rps11) K02948 RP-S11; small subunit ribosomal protein S11 D HP_1197 ribosomal protein S12 (rps12) K02950 RP-S12; small subunit ribosomal protein S12 D HP_1296 ribosomal protein S13 (rps13) K02952 RP-S13; small subunit ribosomal protein S13 D HP_1306 ribosomal protein S14 (rpS14) K02954 RP-S14; small subunit ribosomal protein S14 D HP_1040 ribosomal protein S15 (rps15) K02956 RP-S15; small subunit ribosomal protein S15 D HP_1151 ribosomal protein S16 (rpS16) K02959 RP-S16; small subunit ribosomal protein S16 D HP_1310 ribosomal protein S17 (rps17) K02961 RP-S17; small subunit ribosomal protein S17 D HP_1244 ribosomal protein S18 (rps18) K02963 RP-S18; small subunit ribosomal protein S18 D HP_1315 ribosomal protein S19 (rps19) K02965 RP-S19; small subunit ribosomal protein S19 D HP_0076 ribosomal protein S20 (rps20) K02968 RP-S20; small subunit ribosomal protein S20 D HP_0562 ribosomal protein S21 (rps21) K02970 RP-S21; small subunit ribosomal protein S21 D HP_1201 ribosomal protein L1 (rpl1) K02863 RP-L1; large subunit ribosomal protein L1 D HP_1316 ribosomal protein L2 (rpl2) K02886 RP-L2; large subunit ribosomal protein L2 D HP_1319 ribosomal protein L3 (rpl3) K02906 RP-L3; large subunit ribosomal protein L3 D HP_1318 ribosomal protein L4 (rpl4) K02926 RP-L4; large subunit ribosomal protein L4 D HP_1307 ribosomal protein L5 (rpl5) K02931 RP-L5; large subunit ribosomal protein L5 D HP_1304 ribosomal protein L6 (rpl6) K02933 RP-L6; large subunit ribosomal protein L6 D HP_1199 ribosomal protein L7/L12 (rpl7/l12) K02935 RP-L7; large subunit ribosomal protein L7/L12 D HP_0514 ribosomal protein L9 (rpl9) K02939 RP-L9; large subunit ribosomal protein L9 D HP_1200 ribosomal protein L10 (rpl10) K02864 RP-L10; large subunit ribosomal protein L10 D HP_1202 ribosomal protein L11 (rpl11) K02867 RP-L11; large subunit ribosomal protein L11 D HP_0084 ribosomal protein L13 (rpl13) K02871 RP-L13; large subunit ribosomal protein L13 D HP_1309 ribosomal protein L14 (rpl14) K02874 RP-L14; large subunit ribosomal protein L14 D HP_1301 ribosomal protein L15 (rpl15) K02876 RP-L15; large subunit ribosomal protein L15 D HP_1312 ribosomal protein L16 (rpl16) K02878 RP-L16; large subunit ribosomal protein L16 D HP_1292 ribosomal protein L17 (rpl17) K02879 RP-L17; large subunit ribosomal protein L17 D HP_1303 ribosomal protein L18 (rpl18) K02881 RP-L18; large subunit ribosomal protein L18 D HP_1147 ribosomal protein L19 (rpl19) K02884 RP-L19; large subunit ribosomal protein L19 D HP_0126 ribosomal protein L20 (rpl20) K02887 RP-L20; large subunit ribosomal protein L20 D HP_0296 ribosomal protein L21 (rpl21) K02888 RP-L21; large subunit ribosomal protein L21 D HP_1314 ribosomal protein L22 (rpl22) K02890 RP-L22; large subunit ribosomal protein L22 D HP_1317 ribosomal protein L23 (rpl23) K02892 RP-L23; large subunit ribosomal protein L23 D HP_1308 ribosomal protein L24 (rpl24) K02895 RP-L24; large subunit ribosomal protein L24 D HP_1496 general stress protein (ctc) K02897 RP-L25; large subunit ribosomal protein L25 D HP_0297 ribosomal protein L27 (rpl27) K02899 RP-L27; large subunit ribosomal protein L27 D HP_0491 ribosomal protein L28 (rpL28) K02902 RP-L28; large subunit ribosomal protein L28 D HP_1311 ribosomal protein L29 (rpL29) K02904 RP-L29; large subunit ribosomal protein L29 D HP_0551 ribosomal protein L31 (rpl31) K02909 RP-L31; large subunit ribosomal protein L31 D HP_0200 ribosomal protein L32 (rpl32) K02911 RP-L32; large subunit ribosomal protein L32 D HP_1204 ribosomal protein L33 (rpL33) K02913 RP-L33; large subunit ribosomal protein L33 D HP_1447 ribosomal protein L34 (rpl34) K02914 RP-L34; large subunit ribosomal protein L34 D HP_0125 ribosomal protein L35 (rpl35) K02916 RP-L35; large subunit ribosomal protein L35 D HP_1297 ribosomal protein L36 (rpl36) K02919 RP-L36; large subunit ribosomal protein L36 D HP_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:hpy00970] D HP_t11 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HP_t09 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HP_t17 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HP_t08 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HP_t02 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HP_t24 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HP_t21 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HP_t22 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HP_t31 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HP_t15 tRNA-His K14226 tRNA-His; tRNA His D HP_t12 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HP_t13 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HP_t28 tRNA-Met K14230 tRNA-Met; tRNA Met D HP_t36 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HP_t14 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HP_t25 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HP_t33 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HP_t29 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HP_t32 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HP_t03 tRNA-Val K14237 tRNA-Val; tRNA Val D HP_0476 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0643 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0830 Glu-tRNA(Gln) amidotransferase, subunit A (gatA) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HP_0658 Glu-tRNA(Gln) amidotransferase, subunit B (gatB) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HP_0975 Glu-tRNA(Gln) amidotransferase, subunit C (gatC) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HP_1241 alanyl-tRNA synthetase (alaS) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HP_0617 aspartyl-tRNA synthetase (aspS) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HP_0960 glycyl-tRNA synthetase, alpha subunit (glyQ) K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HP_0972 glycyl-tRNA synthetase, beta subunit (glyS) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HP_0123 threonyl-tRNA synthetase (thrS) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HP_1480 seryl-tRNA synthetase (serS) K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HP_1513 selenocysteine synthase SelA, putative K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D HP_0886 cysteinyl-tRNA synthetase (cysS) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HP_0417 methionyl-tRNA synthetase (metS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HP_1141 methionyl-tRNA formyltransferase (fmt) K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D HP_1153 valyl-tRNA synthetase (valS) K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HP_1547 leucyl-tRNA synthetase (leuS) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HP_1422 isoleucyl-tRNA synthetase (ileS) K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HP_0182 lysyl-tRNA synthetase (lysS) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HP_0319 arginyl-tRNA synthetase (argS) K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HP_0238 prolyl-tRNA synthetase (proS) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HP_1190 histidyl-tRNA synthetase (hisS) K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HP_0403 phenylalanyl-tRNA synthetase, alpha subunit (pheS) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HP_0402 phenylalanyl-tRNA synthetase, beta subunit (pheT) K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HP_0774 tyrosyl-tRNA synthetase (tyrS) K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HP_1253 tryptophanyl-tRNA synthetase (trpS) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:hpy03060] D HP_1300 preprotein translocase subunit (secY) K03076 secY; preprotein translocase subunit SecY D HP_1255 protein translocation protein, low temperature (secG) K03075 secG; preprotein translocase subunit SecG D HP_1549 protein-export membrane protein (secF) K03074 secF; preprotein translocase subunit SecF D HP_1551 conserved hypothetical secreted protein K03210 yajC; preprotein translocase subunit YajC D HP_1450 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HP_0786 preprotein translocase subunit (secA) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HP_1152 signal recognition particle protein (ffh) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HP_0763 cell division protein (ftsY) K03110 ftsY; fused signal recognition particle receptor D HP_0320 conserved hypothetical secreted protein K03116 tatA; sec-independent protein translocase protein TatA D HP_1060 predicted coding region HP1060 K03117 tatB; sec-independent protein translocase protein TatB D HP_1061 conserved hypothetical integral membrane protein K03118 tatC; sec-independent protein translocase protein TatC D HP_0576 signal peptidase I (lepB) K03100 lepB; signal peptidase I [EC:3.4.21.89] D HP_0074 lipoprotein signal peptidase (lspA) K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:hpy04122] D HP_0220 synthesis of [Fe-S] cluster (nifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HP_0013 predicted coding region HP0013 K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HP_1335 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HP_0800 molybdopterin converting factor, subunit 2 (moaE) K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D HP_0768 molybdenum cofactor biosynthesis protein A (moaA) K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D HP_0801 molybdopterin converting factor, subunit 1 (moaD) K03636 moaD; sulfur-carrier protein D HP_0798 molybdenum cofactor biosynthesis protein C (moaC) K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D HP_0799 molybdopterin biosynthesis protein (mog) K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] C 03050 Proteasome C 03018 RNA degradation [PATH:hpy03018] D HP_1228 invasion protein (invA) K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D HP_0154 enolase (eno) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HP_1213 polynucleotide phosphorylase (pnp) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HP_1248 virulence associated protein homolog (vacB) K12573 rnr; ribonuclease R [EC:3.1.13.1] D HP_0247 ATP-dependent RNA helicase, DEAD-box family (deaD) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HP_0550 transcription termination factor Rho (rho) K03628 rho; transcription termination factor Rho D HP_1430 conserved hypothetical ATP-binding protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D HP_0109 chaperone and heat shock protein 70 (dnaK) K04043 dnaK; molecular chaperone DnaK D HP_0010 chaperone and heat shock protein (groEL) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HP_1010 polyphosphate kinase (ppk) K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D HP_0640 poly(A) polymerase (papS) K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:hpy03030] D HP_1387 DNA polymerase III epsilon subunit (dnaQ) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HP_1460 DNA polymerase III alpha-subunit (dnaE) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HP_0717 DNA polymerase III gamma and tau subunits (dnaX) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HP_1231 DNA polymerase III delta prime subunit (holB) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HP_1247 predicted coding region HP1247 K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HP_0500 DNA polymerase III beta-subunit (dnaN) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HP_1362 replicative DNA helicase (dnaB) K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HP_0012 DNA primase (dnaG) K02316 dnaG; DNA primase [EC:2.7.7.101] D HP_1245 single-strand DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D HP_0661 ribonuclease H (rnhA) K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HP_1323 ribonuclease HII (rnhB) K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HP_0615 DNA ligase (lig) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:hpy03410] D HP_0585 endonuclease III (nth) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HP_1347 uracil-DNA glycosylase (ung) K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HP_0142 A/G-specific adenine glycosylase (mutY) K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HP_0650 predicted coding region HP0650 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HP_1526 exodeoxyribonuclease (lexA) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HP_0348 single-stranded-DNA-specific exonuclease (recJ) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HP_0615 DNA ligase (lig) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:hpy03420] D HP_1541 transcription-repair coupling factor (trcF) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HP_0705 excinuclease ABC subunit A (uvrA) K03701 uvrA; excinuclease ABC subunit A D HP_1114 excinuclease ABC subunit B (uvrB) K03702 uvrB; excinuclease ABC subunit B D HP_0821 excinuclease ABC subunit C (uvrC) K03703 uvrC; excinuclease ABC subunit C D HP_0911 rep helicase, single-stranded DNA-dependent ATPase (rep) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HP_1478 DNA helicase II (uvrD) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HP_0615 DNA ligase (lig) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:hpy03430] D HP_0621 DNA mismatch repair protein (MutS) K07456 mutS2; DNA mismatch repair protein MutS2 D HP_0911 rep helicase, single-stranded DNA-dependent ATPase (rep) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HP_1478 DNA helicase II (uvrD) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HP_0259 exonuclease VII, large subunit (xseA) K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HP_1482 predicted coding region HP1482 K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HP_0348 single-stranded-DNA-specific exonuclease (recJ) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HP_1245 single-strand DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D HP_1460 DNA polymerase III alpha-subunit (dnaE) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HP_0500 DNA polymerase III beta-subunit (dnaN) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HP_0717 DNA polymerase III gamma and tau subunits (dnaX) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HP_1247 predicted coding region HP1247 K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HP_1231 DNA polymerase III delta prime subunit (holB) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HP_1387 DNA polymerase III epsilon subunit (dnaQ) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HP_0615 DNA ligase (lig) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:hpy03440] D HP_0348 single-stranded-DNA-specific exonuclease (recJ) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HP_1245 single-strand DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D HP_0925 recombinational DNA repair protein (recR) K06187 recR; recombination protein RecR D HP_0153 recombinase (recA) K03553 recA; recombination protein RecA D HP_0883 Holliday junction DNA helicase (ruvA) K03550 ruvA; holliday junction DNA helicase RuvA D HP_1059 Holliday junction DNA helicase (ruvB) K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HP_0877 Holliday junction endodeoxyribonuclease (ruvC) K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HP_1523 DNA recombinase (recG) K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HP_1460 DNA polymerase III alpha-subunit (dnaE) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HP_0500 DNA polymerase III beta-subunit (dnaN) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HP_0717 DNA polymerase III gamma and tau subunits (dnaX) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HP_1247 predicted coding region HP1247 K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HP_1231 DNA polymerase III delta prime subunit (holB) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HP_1387 DNA polymerase III epsilon subunit (dnaQ) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HP_0387 primosomal protein replication factor (priA) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:hpy02010] D HP_0473 molybdenum ABC transporter, periplasmic molybdate-binding protein (modA) K02020 modA; molybdate transport system substrate-binding protein D HP_0474 molybdenum ABC transporter, permease protein (modB) K02018 modB; molybdate transport system permease protein D HP_0475 molybdenum ABC transporter, ATP-binding protein (modD) K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D HP_0818 osmoprotection protein (proWX) K05845 opuC; osmoprotectant transport system substrate-binding protein D HP_0819 osmoprotection protein (proV) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HP_1464 conserved hypothetical secreted protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HP_1466 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HP_1465 ABC transporter, ATP-binding protein (HI1087) K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HP_0940 amino acid ABC transporter, periplasmic binding protein (yckK) K02424 tcyA; L-cystine transport system substrate-binding protein D HP_0939 amino acid ABC transporter, permease protein (yckJ) K10009 tcyB; L-cystine transport system permease protein D HP_1564 outer membrane protein K02073 metQ; D-methionine transport system substrate-binding protein D HP_1577 ABC transporter, permease protein (yaeE) K02072 metI; D-methionine transport system permease protein D HP_1576 ABC transporter, ATP-binding protein (abc) K02071 metN; D-methionine transport system ATP-binding protein D HP_0298 dipeptide ABC transporter, periplasmic dipeptide-binding protein (dppA) K12368 dppA; dipeptide transport system substrate-binding protein D HP_0299 dipeptide ABC transporter, permease protein (dppB) K12369 dppB; dipeptide transport system permease protein D HP_0300 dipeptide ABC transporter, permease protein (dppC) K12370 dppC; dipeptide transport system permease protein D HP_0301 dipeptide ABC transporter, ATP-binding protein (dppD) K12371 dppD; dipeptide transport system ATP-binding protein D HP_0302 dipeptide ABC transporter, ATP-binding protein (dppF) K12372 dppF; dipeptide transport system ATP-binding protein D HP_1252 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (oppA) K13893 yejA; microcin C transport system substrate-binding protein D HP_1251 oligopeptide ABC transporter, permease protein (oppB) K13894 yejB; microcin C transport system permease protein D HP_0251 oligopeptide ABC transporter, permease protein (oppC) K13895 yejE; microcin C transport system permease protein D HP_0250 oligopeptide ABC transporter, ATP-binding protein (oppD) K13896 yejF; microcin C transport system ATP-binding protein D HP_0362 conserved hypothetical integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein D HP_1498 predicted coding region HP1498 K11720 lptG; lipopolysaccharide export system permease protein D HP_0715 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HP_0749 cell division membrane protein (ftsX) K09811 ftsX; cell division transport system permease protein D HP_0748 cell division protein (ftsE) K09812 ftsE; cell division transport system ATP-binding protein D HP_1082 multidrug resistance protein (msbA) K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:hpy03070] D HP_1549 protein-export membrane protein (secF) K03074 secF; preprotein translocase subunit SecF D HP_1255 protein translocation protein, low temperature (secG) K03075 secG; preprotein translocase subunit SecG D HP_1300 preprotein translocase subunit (secY) K03076 secY; preprotein translocase subunit SecY D HP_1551 conserved hypothetical secreted protein K03210 yajC; preprotein translocase subunit YajC D HP_1450 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HP_0786 preprotein translocase subunit (secA) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HP_0763 cell division protein (ftsY) K03110 ftsY; fused signal recognition particle receptor D HP_1152 signal recognition particle protein (ffh) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HP_0320 conserved hypothetical secreted protein K03116 tatA; sec-independent protein translocase protein TatA D HP_1060 predicted coding region HP1060 K03117 tatB; sec-independent protein translocase protein TatB D HP_1061 conserved hypothetical integral membrane protein K03118 tatC; sec-independent protein translocase protein TatC D HP_0887 vacuolating cytotoxin K11028 vacA; vacuolating cytotoxin D HP_0439 predicted coding region HP0439 K03203 virB8; type IV secretion system protein VirB8 D HP_0441 VirB4 homolog K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D HP_0525 virB11 homolog K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D HP_1421 conjugative transfer regulon protein (trbB) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D HP_1006 conjugal transfer protein (traG) K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] B B 09132 Signal transduction C 02020 Two-component system [PATH:hpy02020] D HP_1329 cation efflux system protein (czcA) K07787 cusA; copper/silver efflux system protein D HP_0115 flagellin B (flaB) K02406 fliC; flagellin D HP_0601 flagellin A (flaA) K02406 fliC; flagellin D HP_1032 alternative transcription initiation factor, sigma-F (fliA) K02405 fliA; RNA polymerase sigma factor FliA D HP_0815 flagellar motor rotation protein (motA) K02556 motA; chemotaxis protein MotA D HP_1529 chromosomal replication initiator protein (dnaA) K02313 dnaA; chromosomal replication initiator protein D HP_1442 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator D HP_0512 glutamine synthetase (glnA) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HP_0244 signal-transducing protein, histidine kinase (atoS) K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D HP_0693 conserved hypothetical integral membrane protein K02106 atoE; short-chain fatty acids transporter D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HP_0714 RNA polymerase sigma-54 factor (rpoN) K03092 rpoN; RNA polymerase sigma-54 factor D HP_0633 quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit (hydC) K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D HP_0082 methyl-accepting chemotaxis transducer (tlpC) K03406 mcp; methyl-accepting chemotaxis protein D HP_0099 methyl-accepting chemotaxis protein (tlpA) K03406 mcp; methyl-accepting chemotaxis protein D HP_0103 methyl-accepting chemotaxis protein (tlpB) K03406 mcp; methyl-accepting chemotaxis protein D HP_0391 purine-binding chemotaxis protein (cheW) K03408 cheW; purine-binding chemotaxis protein CheW D HP_0392 histidine kinase (cheA) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HP_1067 chemotaxis protein (cheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HP_0019 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0393 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0616 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_1540 ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit (fbcF) K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D HP_1539 ubiquinol cytochrome c oxidoreductase, cytochrome b subunit (fbcH) K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HP_0144 cytochrome c oxidase, heme b and copper-binding subunit, membrane-bound (fixN) K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D HP_0145 cytochrome c oxidase, monoheme subunit, membrane-bound (fixO) K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D HP_0146 cbb3-type cytochrome c oxidase subunit Q (CcoQ) K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D HP_0147 cytochrome c oxidase, diheme subunit, membrane-bound (fixP) K00406 ccoP; cytochrome c oxidase cbb3-type subunit III C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:hpy04148] D HP_1399 arginase (rocF) K01476 rocF; arginase [EC:3.5.3.1] D HP_1540 ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit (fbcF) K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:hpy02024] D HP_0105 conserved hypothetical protein K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D HP_1282 anthranilate synthase component I (trpE) K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D HP_1281 anthranilate synthase component II (trpD) K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D HP_0134 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (dhs1) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D HP_0802 GTP cyclohydrolase II (ribA) K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D HP_1505 riboflavin biosynthesis protein (ribG) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D HP_1450 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HP_1255 protein translocation protein, low temperature (secG) K03075 secG; preprotein translocase subunit SecG D HP_1300 preprotein translocase subunit (secY) K03076 secY; preprotein translocase subunit SecY D HP_1551 conserved hypothetical secreted protein K03210 yajC; preprotein translocase subunit YajC D HP_0786 preprotein translocase subunit (secA) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HP_0763 cell division protein (ftsY) K03110 ftsY; fused signal recognition particle receptor D HP_1152 signal recognition particle protein (ffh) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:hpy02030] D HP_0082 methyl-accepting chemotaxis transducer (tlpC) K03406 mcp; methyl-accepting chemotaxis protein D HP_0099 methyl-accepting chemotaxis protein (tlpA) K03406 mcp; methyl-accepting chemotaxis protein D HP_0103 methyl-accepting chemotaxis protein (tlpB) K03406 mcp; methyl-accepting chemotaxis protein D HP_0298 dipeptide ABC transporter, periplasmic dipeptide-binding protein (dppA) K12368 dppA; dipeptide transport system substrate-binding protein D HP_0392 histidine kinase (cheA) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HP_0391 purine-binding chemotaxis protein (cheW) K03408 cheW; purine-binding chemotaxis protein CheW D HP_1067 chemotaxis protein (cheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HP_0019 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0393 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0616 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0352 flagellar motor switch protein (fliG) K02410 fliG; flagellar motor switch protein FliG D HP_1031 flagellar motor switch protein (fliM) K02416 fliM; flagellar motor switch protein FliM D HP_0584 flagellar switch protein (fliN) K02417 fliN; flagellar motor switch protein FliN D HP_1030 fliY protein (fliY) K02417 fliN; flagellar motor switch protein FliN D HP_0815 flagellar motor rotation protein (motA) K02556 motA; chemotaxis protein MotA D HP_0816 flagellar motor rotation protein (motB) K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:hpy02040] D HP_1557 flagellar basal-body protein (fliE) K02408 fliE; flagellar hook-basal body complex protein FliE D HP_0351 flagellar basal-body M-ring protein (fliF) K02409 fliF; flagellar M-ring protein FliF D HP_0352 flagellar motor switch protein (fliG) K02410 fliG; flagellar motor switch protein FliG D HP_0353 flagellar export protein (fliH) K02411 fliH; flagellar assembly protein FliH D HP_1420 flagellar export protein ATP synthase (fliI) K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HP_0906 predicted coding region HP0906 K02414 fliK; flagellar hook-length control protein FliK D HP_0809 predicted coding region HP0809 K02415 fliL; flagellar protein FliL D HP_1031 flagellar motor switch protein (fliM) K02416 fliM; flagellar motor switch protein FliM D HP_0584 flagellar switch protein (fliN) K02417 fliN; flagellar motor switch protein FliN D HP_1030 fliY protein (fliY) K02417 fliN; flagellar motor switch protein FliN D HP_1419 flagellar biosynthetic protein (fliQ) K02420 fliQ; flagellar biosynthesis protein FliQ D HP_0173 flagellar biosynthetic protein (fliR) K02421 fliR; flagellar biosynthesis protein FliR D HP_1041 flagellar biosynthesis protein (flhA) K02400 flhA; flagellar biosynthesis protein FlhA D HP_0770 flagellar biosynthetic protein (flhB) K02401 flhB; flagellar biosynthesis protein FlhB D HP_1477 predicted coding region HP1477 K02386 flgA; flagellar basal body P-ring formation protein FlgA D HP_1559 flagellar basal-body rod protein (flgB) K02387 flgB; flagellar basal-body rod protein FlgB D HP_1558 flagellar basal-body rod protein (flgC) K02388 flgC; flagellar basal-body rod protein FlgC D HP_0907 hook assembly protein, flagella (flgD) K02389 flgD; flagellar basal-body rod modification protein FlgD D HP_0870 flagellar hook (flgE) K02390 flgE; flagellar hook protein FlgE D HP_0908 flagellar hook (flgE) K02390 flgE; flagellar hook protein FlgE D HP_1092 flagellar basal-body rod protein (flgG) K02391 flgF; flagellar basal-body rod protein FlgF D HP_1585 flagellar basal-body rod protein (flgG) K02392 flgG; flagellar basal-body rod protein FlgG D HP_0325 flagellar basal-body L-ring protein (flgH) K02393 flgH; flagellar L-ring protein FlgH D HP_0246 flagellar basal-body P-ring protein (flgI) K02394 flgI; flagellar P-ring protein FlgI D HP_0245 predicted coding region HP0245 K02395 flgJ; peptidoglycan hydrolase FlgJ D HP_1119 flagellar hook-associated protein 1 (HAP1) (flgK) K02396 flgK; flagellar hook-associated protein 1 D HP_0295 flagellin B homolog (fla) K02397 flgL; flagellar hook-associated protein 3 FlgL D HP_0115 flagellin B (flaB) K02406 fliC; flagellin D HP_0601 flagellin A (flaA) K02406 fliC; flagellin D HP_0752 flagellar hook-associated protein 2 (fliD) K02407 fliD; flagellar hook-associated protein 2 D HP_0753 flagellar protein (fliS) K02422 fliS; flagellar secretion chaperone FliS D HP_0815 flagellar motor rotation protein (motA) K02556 motA; chemotaxis protein MotA D HP_0816 flagellar motor rotation protein (motB) K02557 motB; chemotaxis protein MotB D HP_0940 amino acid ABC transporter, periplasmic binding protein (yckK) K02424 tcyA; L-cystine transport system substrate-binding protein D HP_0088 RNA polymerase sigma-70 factor (rpoD) K03086 rpoD; RNA polymerase primary sigma factor D HP_0714 RNA polymerase sigma-54 factor (rpoN) K03092 rpoN; RNA polymerase sigma-54 factor D HP_1032 alternative transcription initiation factor, sigma-F (fliA) K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D HP_0154 enolase (eno) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection [PATH:hpy05120] D HP_0547 cag pathogenicity island protein (cag26) K15842 cagA; cytotoxicity-associated immunodominant antigen D HP_0520 cag pathogenicity island protein (cag1) K12086 cag1; cag pathogenicity island protein 1 D HP_0522 cag pathogenicity island protein (cag3) K12088 cag3; cag pathogenicity island protein 3 D HP_0523 cag pathogenicity island protein (cag4) K12089 cag4; cag pathogenicity island protein 4 D HP_0524 cag pathogenicity island protein (cag5) K12090 cag5; cag pathogenicity island protein 5 D HP_0525 virB11 homolog K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D HP_1421 conjugative transfer regulon protein (trbB) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D HP_0526 cag pathogenicity island protein (cag6) K12091 cag6; cag pathogenicity island protein 6 D HP_0527 cag pathogenicity island protein (cag7) K12092 cag7; cag pathogenicity island protein 7 D HP_0528 cag pathogenicity island protein (cag8) K12093 cag8; cag pathogenicity island protein 8 D HP_0529 cag pathogenicity island protein (cag9) K12094 cag9; cag pathogenicity island protein 9 D HP_0530 cag pathogenicity island protein (cag10) K12095 cag10; cag pathogenicity island protein 10 D HP_0531 cag pathogenicity island protein (cag11) K12096 cag11; cag pathogenicity island protein 11 D HP_0532 cag pathogenicity island protein (cag12) K12097 cag12; cag pathogenicity island protein 12 D HP_0534 cag pathogenicity island protein (cag13) K12098 cag13; cag pathogenicity island protein 13 D HP_0535 cag pathogenicity island protein (cag14) K12099 cag14; cag pathogenicity island protein 14 D HP_0536 cag pathogenicity island protein (cag15) K12100 cag15; cag pathogenicity island protein 15 D HP_0537 cag pathogenicity island protein (cag16) K12101 cag16; cag pathogenicity island protein 16 D HP_0538 cag pathogenicity island protein (cag17) K12102 cag17; cag pathogenicity island protein 17 D HP_0539 cag pathogenicity island protein (cag18) K12103 cag18; cag pathogenicity island protein 18 D HP_0540 cag pathogenicity island protein (cag19) K12104 cag19; cag pathogenicity island protein 19 D HP_0541 cag pathogenicity island protein (cag20) K12105 cag20; cag pathogenicity island protein 20 D HP_0542 cag pathogenicity island protein (cag21) K12106 cag21; cag pathogenicity island protein 21 D HP_0543 cag pathogenicity island protein (cag22) K12107 cag22; cag pathogenicity island protein 22 D HP_0544 cag pathogenicity island protein (cag23) K12108 cag23; cag pathogenicity island protein 23 [EC:7.4.2.8] D HP_0545 cag pathogenicity island protein (cag24) K12109 cag24; cag pathogenicity island protein 24 D HP_0546 cag pathogenicity island protein (cag25) K12110 cag25; cag pathogenicity island protein 25 D HP_0887 vacuolating cytotoxin K11028 vacA; vacuolating cytotoxin D HP_0071 urease accessory protein (ureI) K03191 ureI; acid-activated urea channel D HP_0073 urease alpha subunit (ureA) (urea amidohydrolase) K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5] D HP_0072 urease beta subunit (urea amidohydrolase) (ureB) K01428 ureC; urease subunit alpha [EC:3.5.1.5] D HP_0169 collagenase (prtC) K08303 prtC; U32 family peptidase [EC:3.4.-.-] D HP_0912 outer membrane protein (omp20) K15843 hopC; outer membrane protein HopC/AlpA D HP_0913 outer membrane protein (omp21) K15844 hopB; outer membrane protein HopB/AlpB D HP_0410 putative neuraminyllactose-binding hemagglutinin homolog (hpaA) K15846 hpaA; neuraminyllactose-binding hemagglutinin D HP_0492 predicted coding region HP0492 K15846 hpaA; neuraminyllactose-binding hemagglutinin D HP_0797 flagellar sheath adhesin hpaA K15846 hpaA; neuraminyllactose-binding hemagglutinin D HP_1243 outer membrane protein (omp28) K15847 babA; outer membrane protein BabA C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:hpy01501] D HP_0597 penicillin-binding protein 1A (PBP-1A) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HP_1565 penicillin-binding protein 2 (pbp2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HP_1556 cell division protein (ftsI) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:hpy01502] D HP_0738 D-alanine:D-alanine ligase A (ddlA) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HP_0941 alanine racemase, biosynthetic (alr) K01775 alr; alanine racemase [EC:5.1.1.1] D HP_0740 UDP-MurNac-pentapeptide presynthetase (murF) K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D HP_0493 phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HP_1155 transferase, peptidoglycan synthesis (murG) K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:hpy01503] D HP_0022 conserved hypothetical integral membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D HP_0772 N-acetylmuramoyl-L-alanine amidase (amiA) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HP_1375 UDP-N-acetylglucosamine acyltransferase (lpxA) K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:hpy01000] C 01001 Protein kinases [BR:hpy01001] D HP_1364 signal-transducing protein, histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HP_0244 signal-transducing protein, histidine kinase (atoS) K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D HP_0392 histidine kinase (cheA) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:hpy01009] D HP_0210 chaperone and heat shock protein C62.5 (htpG) K04079 HSP90A; molecular chaperone HtpG D HP_0652 phosphoserine phosphatase (serB) K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:hpy01002] D HP_0074 lipoprotein signal peptidase (lspA) K03101 lspA; signal peptidase II [EC:3.4.23.36] D HP_0634 quinone-reactive Ni/Fe hydrogenase (hydD) K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D HP_0409 GMP synthase (guaA) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D HP_1532 glucosamine fructose-6-phosphate aminotransferase (isomerizing) (glmS) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D HP_0470 oligoendopeptidase F (pepF) K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D HP_0570 aminopeptidase a/i (pepA) K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D HP_0212 succinyl-diaminopimelate desuccinylase (dapE) K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D HP_1299 methionine amino peptidase (map) K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D HP_1037 conserved hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D HP_1069 cell division protein (ftsH) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HP_0927 heat shock protein (htpX) K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D HP_0258 conserved hypothetical integral membrane protein K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D HP_0794 ATP-dependent clp protease proteolytic component (clpP) K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D HP_1379 ATP-dependent protease (lon) K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D HP_0576 signal peptidase I (lepB) K03100 lepB; signal peptidase I [EC:3.4.21.89] D HP_1350 protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D HP_1435 protease IV (PspA) K04773 sppA; protease IV [EC:3.4.21.-] D HP_0515 heat shock protein (hslV) K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D HP_1118 gamma-glutamyltranspeptidase (ggt) K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D HP_0169 collagenase (prtC) K08303 prtC; U32 family peptidase [EC:3.4.-.-] C 01003 Glycosyltransferases [BR:hpy01003] D HP_0379 fucosyltransferase K20151 fucT; alpha(1,3/1,4) fucosyltransferase [EC:2.4.1.65 2.4.1.152] D HP_0651 fucosyltransferase K20151 fucT; alpha(1,3/1,4) fucosyltransferase [EC:2.4.1.65 2.4.1.152] D HP_0597 penicillin-binding protein 1A (PBP-1A) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HP_0217 predicted coding region HP0217 K13689 cgtA; beta-1,4-N-acetylgalactosaminyltransferase [EC:2.4.1.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:hpy01005] D HP_1375 UDP-N-acetylglucosamine acyltransferase (lpxA) K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D HP_0867 lipid A disaccharide synthetase (lpxB) K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D HP_1052 UDP-3-0-acyl N-acetylglcosamine deacetylase (envA) K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D HP_0196 UDP-3-0-(3-hydroxymyristoyl) glucosamine N-acyltransferase (lpxD) K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D HP_0021 predicted coding region HP0021 K12977 lpxE; lipid A 1-phosphatase [EC:3.1.3.-] D HP_1580 predicted coding region HP1580 K23159 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D HP_0394 predicted coding region HP0394 K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D HP_0328 conserved hypothetical protein K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D HP_0280 heat shock protein B (ibpB) K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D HP_0957 3-deoxy-d-manno-octulosonic-acid transferase (kdtA) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D HP_0022 conserved hypothetical integral membrane protein K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D HP_0579 predicted coding region HP0579 K23082 kdoH1; 3-deoxy-D-manno-octulosonic acid-hydrolase [EC:3.2.1.144] D HP_0580 predicted coding region HP0580 K23083 kdoH2; 3-deoxy-D-manno-octulosonic acid-hydrolase D HP_0003 3-deoxy-d-manno-octulosonic acid 8-phosphate synthetase (kdsA) K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D HP_0230 CTP:CMP-3-deoxy-D-manno-octulosonate-cytidylyl-transferase (kdsB) K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D HP_1570 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D HP_1429 polysialic acid capsule expression protein (kpsF) K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D HP_0279 lipopolysaccharide heptosyltransferase-1 (rfaC) K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D HP_1191 ADP-heptose-lps heptosyltransferase II (rfaF) K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D HP_0159 lipopolysaccharide 1,2-glucosyltransferase (rfaJ) K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D HP_1416 lipopolysaccharide 1,2-glucosyltransferase (rfaJ) K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D HP_1039 predicted coding region HP1039 K02847 waaL; O-antigen ligase [EC:2.4.99.26] D HP_0857 phosphoheptose isomerase (gmhA) K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D HP_0860 conserved hypothetical protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D HP_0858 ADP-heptose synthase (rfaE) K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D HP_0859 ADP-L-glycero-D-mannoheptose-6-epimerase (rfaD) K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:hpy01011] D HP_0648 UDP-N-acetylglucosamine enolpyruvyl transferase (murZ) K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D HP_1418 UDP-N-acetylenolpyruvoylglucosamine reductase (murB) K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D HP_0623 UDP-N-acetylmuramate-alanine ligase (murC) K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D HP_0494 UDP-N-acetylmuramoylalanine-D-glutamate ligase (murD) K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D HP_1494 UDP-MurNac-tripeptide synthetase (murE) K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D HP_0738 D-alanine:D-alanine ligase A (ddlA) K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D HP_0941 alanine racemase, biosynthetic (alr) K01775 alr; alanine racemase [EC:5.1.1.1] D HP_0549 glutamate racemase (glr) K01776 murI; glutamate racemase [EC:5.1.1.3] D HP_0493 phospho-N-acetylmuramoyl-pentapeptide-transferase (mraY) K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D HP_1155 transferase, peptidoglycan synthesis (murG) K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D HP_0851 conserved hypothetical integral membrane protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D HP_0885 virulence factor mviN protein (mviN) K03980 murJ; putative peptidoglycan lipid II flippase D HP_0597 penicillin-binding protein 1A (PBP-1A) K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D HP_1565 penicillin-binding protein 2 (pbp2) K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D HP_1556 cell division protein (ftsI) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HP_0645 soluble lytic murein transglycosylase (slt) K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D HP_1572 regulatory protein DniR K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D HP_0587 aminodeoxychorismate lyase (pabC) K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D HP_1571 rare lipoprotein A (rlpA) K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D HP_0772 N-acetylmuramoyl-L-alanine amidase (amiA) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:hpy01004] D HP_0090 malonyl coenzyme A-acyl carrier protein transacylase (fabD) K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D HP_0202 beta-ketoacyl-acyl carrier protein synthase III (fabH) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D HP_0558 beta ketoacyl-acyl carrier protein synthase II (fabF) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D HP_0561 3-ketoacyl-acyl carrier protein reductase (fabG) K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D HP_1376 (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase (fabZ) K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D HP_0195 enoyl-(acyl-carrier-protein) reductase (NADH) (fabI) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D HP_1045 acetyl-CoA synthetase (acoE) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D HP_0201 fatty acid/phospholipid synthesis protein (plsX) K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D HP_1509 conserved hypothetical integral membrane protein K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D HP_1348 1-acyl-glycerol-3-phosphate acyltransferase (plsC) K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:hpy01006] D HP_0929 geranyltranstransferase (ispA) K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D HP_0240 octaprenyl-diphosphate synthase (ispB) K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D HP_1221 conserved hypothetical protein K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D HP_1415 tRNA delta(2)-isopentenylpyrophosphate transferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HP_1360 4-hydroxybenzoate octaprenyltransferase (ubiA) K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:hpy01007] D HP_0476 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0643 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0774 tyrosyl-tRNA synthetase (tyrS) K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HP_1253 tryptophanyl-tRNA synthetase (trpS) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HP_0886 cysteinyl-tRNA synthetase (cysS) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HP_0319 arginyl-tRNA synthetase (argS) K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HP_0417 methionyl-tRNA synthetase (metS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HP_1422 isoleucyl-tRNA synthetase (ileS) K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HP_1153 valyl-tRNA synthetase (valS) K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HP_1547 leucyl-tRNA synthetase (leuS) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HP_0182 lysyl-tRNA synthetase (lysS) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HP_0617 aspartyl-tRNA synthetase (aspS) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HP_1190 histidyl-tRNA synthetase (hisS) K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HP_0960 glycyl-tRNA synthetase, alpha subunit (glyQ) K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HP_0972 glycyl-tRNA synthetase, beta subunit (glyS) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HP_1480 seryl-tRNA synthetase (serS) K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HP_0238 prolyl-tRNA synthetase (proS) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HP_0123 threonyl-tRNA synthetase (thrS) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HP_1241 alanyl-tRNA synthetase (alaS) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HP_0403 phenylalanyl-tRNA synthetase, alpha subunit (pheS) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HP_0402 phenylalanyl-tRNA synthetase, beta subunit (pheT) K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HP_0672 solute-binding signature and mitochondrial signature protein (aspB) K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D HP_0598 8-amino-7-oxononanoate synthase (bioF) K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D HP_0976 adenosylmethionine-8-amino-7-oxononanoate aminotransferase (bioA) K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D HP_0306 glutamate-1-semialdehyde 2,1-aminomutase (hemL) K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D HP_1468 branched-chain-amino-acid aminotransferase (ilvE) K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D HP_0293 para-aminobenzoate synthetase (pabB) K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:hpy00194] D HP_1131 ATP synthase F1, subunit epsilon (atpC) K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D HP_1132 ATP synthase F1, subunit beta (atpD) K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D HP_1133 ATP synthase F1, subunit gamma (atpG) K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D HP_1134 ATP synthase F1, subunit alpha (atpA) K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D HP_1135 ATP synthase F1, subunit delta (atpH) K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D HP_1136 ATP synthase F0, subunit b (atpF) K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HP_1137 ATP synthase F0, subunit b' (atpF') K02109 ATPF0B; F-type H+-transporting ATPase subunit b D HP_1212 ATP synthase F0, subunit c (atpE) K02110 ATPF0C; F-type H+-transporting ATPase subunit c D HP_0828 ATP synthase F0, subunit a (atpB) K02108 ATPF0A; F-type H+-transporting ATPase subunit a B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:hpy03000] D HP_0051 cytosine specific DNA methyltransferase (DDEM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_0054 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_1121 cytosine specific DNA methyltransferase (BSP6IM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_1025 putative heat shock protein (hspR) K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR D HP_1027 ferric uptake regulation protein (fur) K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D HP_1140 biotin operon repressor/biotin acetyl coenzyme A carboxylase synthetase (birA) K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D HP_1338 conserved hypothetical protein K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D HP_0056 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D HP_1138 plasmid replication-partition related protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HP_0111 predicted coding region HP0111 K03705 hrcA; heat-inducible transcriptional repressor D HP_1287 transcriptional regulator (tenA) K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] C 03021 Transcription machinery [BR:hpy03021] D HP_1293 DNA-directed RNA polymerase, alpha subunit (rpoA) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HP_1198 DNA-directed RNA polymerase, beta subunit (rpoB) K13797 rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6] D HP_0776 predicted coding region HP0776 K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HP_0088 RNA polymerase sigma-70 factor (rpoD) K03086 rpoD; RNA polymerase primary sigma factor D HP_0714 RNA polymerase sigma-54 factor (rpoN) K03092 rpoN; RNA polymerase sigma-54 factor D HP_1032 alternative transcription initiation factor, sigma-F (fliA) K02405 fliA; RNA polymerase sigma factor FliA D HP_1514 transcription termination factor NusA (nusA) K02600 nusA; transcription termination/antitermination protein NusA D HP_0001 predicted coding region HP0001 K03625 nusB; transcription antitermination protein NusB D HP_1203 transcription termination factor NusG (nusG) K02601 nusG; transcription termination/antitermination protein NusG D HP_0866 transcription elongation factor GreA (greA) K03624 greA; transcription elongation factor GreA D HP_0550 transcription termination factor Rho (rho) K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:hpy03019] D HP_0662 ribonuclease III (rnc) K03685 rnc; ribonuclease III [EC:3.1.26.3] D HP_1430 conserved hypothetical ATP-binding protein K12574 rnj; ribonuclease J [EC:3.1.-.-] D HP_1248 virulence associated protein homolog (vacB) K12573 rnr; ribonuclease R [EC:3.1.13.1] D HP_0247 ATP-dependent RNA helicase, DEAD-box family (deaD) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HP_0154 enolase (eno) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HP_1213 polynucleotide phosphorylase (pnp) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D HP_0550 transcription termination factor Rho (rho) K03628 rho; transcription termination factor Rho D HP_0109 chaperone and heat shock protein 70 (dnaK) K04043 dnaK; molecular chaperone DnaK D HP_0010 chaperone and heat shock protein (groEL) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HP_1010 polyphosphate kinase (ppk) K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D HP_0640 poly(A) polymerase (papS) K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D HP_1228 invasion protein (invA) K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D HP_1442 carbon storage regulator (csrA) K03563 csrA; carbon storage regulator C 03041 Spliceosome C 03011 Ribosome [BR:hpy03011] D HP_0399 ribosomal protein S1 (rps1) K02945 RP-S1; small subunit ribosomal protein S1 D HP_1554 ribosomal protein S2 (rps2) K02967 RP-S2; small subunit ribosomal protein S2 D HP_1313 ribosomal protein S3 (rps3) K02982 RP-S3; small subunit ribosomal protein S3 D HP_1294 ribosomal protein S4 (rps4) K02986 RP-S4; small subunit ribosomal protein S4 D HP_1302 ribosomal protein S5 (rps5) K02988 RP-S5; small subunit ribosomal protein S5 D HP_1246 ribosomal protein S6 (rps6) K02990 RP-S6; small subunit ribosomal protein S6 D HP_1196 ribosomal protein S7 (rps7) K02992 RP-S7; small subunit ribosomal protein S7 D HP_1305 ribosomal protein S8 (rps8) K02994 RP-S8; small subunit ribosomal protein S8 D HP_0083 ribosomal protein S9 (rps9) K02996 RP-S9; small subunit ribosomal protein S9 D HP_1320 ribosomal protein S10 (rps10) K02946 RP-S10; small subunit ribosomal protein S10 D HP_1295 ribosomal protein S11 (rps11) K02948 RP-S11; small subunit ribosomal protein S11 D HP_1197 ribosomal protein S12 (rps12) K02950 RP-S12; small subunit ribosomal protein S12 D HP_1296 ribosomal protein S13 (rps13) K02952 RP-S13; small subunit ribosomal protein S13 D HP_1306 ribosomal protein S14 (rpS14) K02954 RP-S14; small subunit ribosomal protein S14 D HP_1040 ribosomal protein S15 (rps15) K02956 RP-S15; small subunit ribosomal protein S15 D HP_1151 ribosomal protein S16 (rpS16) K02959 RP-S16; small subunit ribosomal protein S16 D HP_1310 ribosomal protein S17 (rps17) K02961 RP-S17; small subunit ribosomal protein S17 D HP_1244 ribosomal protein S18 (rps18) K02963 RP-S18; small subunit ribosomal protein S18 D HP_1315 ribosomal protein S19 (rps19) K02965 RP-S19; small subunit ribosomal protein S19 D HP_0076 ribosomal protein S20 (rps20) K02968 RP-S20; small subunit ribosomal protein S20 D HP_0562 ribosomal protein S21 (rps21) K02970 RP-S21; small subunit ribosomal protein S21 D HP_1201 ribosomal protein L1 (rpl1) K02863 RP-L1; large subunit ribosomal protein L1 D HP_1316 ribosomal protein L2 (rpl2) K02886 RP-L2; large subunit ribosomal protein L2 D HP_1319 ribosomal protein L3 (rpl3) K02906 RP-L3; large subunit ribosomal protein L3 D HP_1318 ribosomal protein L4 (rpl4) K02926 RP-L4; large subunit ribosomal protein L4 D HP_1307 ribosomal protein L5 (rpl5) K02931 RP-L5; large subunit ribosomal protein L5 D HP_1304 ribosomal protein L6 (rpl6) K02933 RP-L6; large subunit ribosomal protein L6 D HP_0514 ribosomal protein L9 (rpl9) K02939 RP-L9; large subunit ribosomal protein L9 D HP_1200 ribosomal protein L10 (rpl10) K02864 RP-L10; large subunit ribosomal protein L10 D HP_1202 ribosomal protein L11 (rpl11) K02867 RP-L11; large subunit ribosomal protein L11 D HP_1199 ribosomal protein L7/L12 (rpl7/l12) K02935 RP-L7; large subunit ribosomal protein L7/L12 D HP_0084 ribosomal protein L13 (rpl13) K02871 RP-L13; large subunit ribosomal protein L13 D HP_1309 ribosomal protein L14 (rpl14) K02874 RP-L14; large subunit ribosomal protein L14 D HP_1301 ribosomal protein L15 (rpl15) K02876 RP-L15; large subunit ribosomal protein L15 D HP_1312 ribosomal protein L16 (rpl16) K02878 RP-L16; large subunit ribosomal protein L16 D HP_1292 ribosomal protein L17 (rpl17) K02879 RP-L17; large subunit ribosomal protein L17 D HP_1303 ribosomal protein L18 (rpl18) K02881 RP-L18; large subunit ribosomal protein L18 D HP_1147 ribosomal protein L19 (rpl19) K02884 RP-L19; large subunit ribosomal protein L19 D HP_0126 ribosomal protein L20 (rpl20) K02887 RP-L20; large subunit ribosomal protein L20 D HP_0296 ribosomal protein L21 (rpl21) K02888 RP-L21; large subunit ribosomal protein L21 D HP_1314 ribosomal protein L22 (rpl22) K02890 RP-L22; large subunit ribosomal protein L22 D HP_1317 ribosomal protein L23 (rpl23) K02892 RP-L23; large subunit ribosomal protein L23 D HP_1308 ribosomal protein L24 (rpl24) K02895 RP-L24; large subunit ribosomal protein L24 D HP_0297 ribosomal protein L27 (rpl27) K02899 RP-L27; large subunit ribosomal protein L27 D HP_0491 ribosomal protein L28 (rpL28) K02902 RP-L28; large subunit ribosomal protein L28 D HP_1311 ribosomal protein L29 (rpL29) K02904 RP-L29; large subunit ribosomal protein L29 D HP_0551 ribosomal protein L31 (rpl31) K02909 RP-L31; large subunit ribosomal protein L31 D HP_0200 ribosomal protein L32 (rpl32) K02911 RP-L32; large subunit ribosomal protein L32 D HP_1204 ribosomal protein L33 (rpL33) K02913 RP-L33; large subunit ribosomal protein L33 D HP_1447 ribosomal protein L34 (rpl34) K02914 RP-L34; large subunit ribosomal protein L34 D HP_0125 ribosomal protein L35 (rpl35) K02916 RP-L35; large subunit ribosomal protein L35 D HP_1297 ribosomal protein L36 (rpl36) K02919 RP-L36; large subunit ribosomal protein L36 D HP_1496 general stress protein (ctc) K02897 RP-L25; large subunit ribosomal protein L25 D HP_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA C 03009 Ribosome biogenesis [BR:hpy03009] D HP_0662 ribonuclease III (rnc) K03685 rnc; ribonuclease III [EC:3.1.26.3] D HP_0517 GTP-binding protein (era) K03595 era; GTPase D HP_0303 GTP-binding protein (obg) K03979 obgE; GTPase [EC:3.6.5.-] D HP_1514 transcription termination factor NusA (nusA) K02600 nusA; transcription termination/antitermination protein NusA D HP_0001 predicted coding region HP0001 K03625 nusB; transcription antitermination protein NusB D HP_1203 transcription termination factor NusG (nusG) K02601 nusG; transcription termination/antitermination protein NusG D HP_1431 16S rRNA (adenosine-N6,N6-)-dimethyltransferase (ksgA) K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D HP_0374 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D HP_1063 glucose-inhibited division protein (gidB) K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HP_0707 conserved hypothetical protein K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D HP_0552 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D HP_1086 hemolysin (tly) K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D HP_0553 conserved hypothetical protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D HP_0949 conserved hypothetical secreted protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D HP_1428 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D HP_1459 conserved hypothetical protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D HP_0956 conserved hypothetical protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D HP_0347 conserved hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HP_0745 conserved hypothetical protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D HP_1149 conserved hypothetical protein K02860 rimM; 16S rRNA processing protein RimM D HP_0734 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D HP_1068 ribosomal protein L11 methyltransferase (prmA) K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D HP_0334 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D HP_0247 ATP-dependent RNA helicase, DEAD-box family (deaD) K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D HP_0834 GTP-binding protein homologue (yphC) K03977 engA; GTPase D HP_0775 penta-phosphate guanosine-3'-pyrophosphohydrolase (spoT) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D HP_1047 ribosome-binding factor A (rbfA) K02834 rbfA; ribosome-binding factor A D HP_1046 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP D HP_1414 conserved hypothetical protein K09710 ybeB; ribosome-associated protein D HP_1160 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor D HP_0569 GTP-binding protein (gtp1) K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:hpy03016] D HP_0476 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0643 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0238 prolyl-tRNA synthetase (proS) K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D HP_1422 isoleucyl-tRNA synthetase (ileS) K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D HP_1547 leucyl-tRNA synthetase (leuS) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HP_0417 methionyl-tRNA synthetase (metS) K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D HP_0319 arginyl-tRNA synthetase (argS) K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HP_0182 lysyl-tRNA synthetase (lysS) K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D HP_0617 aspartyl-tRNA synthetase (aspS) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HP_1241 alanyl-tRNA synthetase (alaS) K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D HP_0123 threonyl-tRNA synthetase (thrS) K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D HP_1480 seryl-tRNA synthetase (serS) K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D HP_0886 cysteinyl-tRNA synthetase (cysS) K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D HP_1153 valyl-tRNA synthetase (valS) K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D HP_1190 histidyl-tRNA synthetase (hisS) K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D HP_0403 phenylalanyl-tRNA synthetase, alpha subunit (pheS) K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D HP_0402 phenylalanyl-tRNA synthetase, beta subunit (pheT) K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D HP_0774 tyrosyl-tRNA synthetase (tyrS) K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HP_1253 tryptophanyl-tRNA synthetase (trpS) K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D HP_0404 protein kinase C inhibitor (SP:P16436) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HP_0747 conserved hypothetical protein K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D HP_0361 pseudouridylate synthase I (hisT) K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D HP_0926 conserved hypothetical protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D HP_0220 synthesis of [Fe-S] cluster (nifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HP_1415 tRNA delta(2)-isopentenylpyrophosphate transferase (miaA) K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D HP_1452 thiophene and furan oxidizer (tdhF) K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D HP_0213 glucose inhibited division protein (gidA) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HP_1448 ribonuclease P, protein component (rnpA) K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D HP_0960 glycyl-tRNA synthetase, alpha subunit (glyQ) K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D HP_0972 glycyl-tRNA synthetase, beta subunit (glyS) K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D HP_0727 transcriptional regulator, putative K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D HP_0269 conserved hypothetical ATP-binding protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D HP_0388 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D HP_0419 conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D HP_1148 tRNA (guanine-N1)-methyltransferase (trmD) K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D HP_0013 predicted coding region HP0013 K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HP_1335 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D HP_1062 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (queA) K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D HP_0639 conserved hypothetical protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D HP_0933 predicted coding region HP0933 K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D HP_0934 conserved hypothetical protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D HP_1413 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D HP_0100 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6] D HP_0281 tRNA-guanine transglycosylase (tgt) K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D HP_0728 conserved hypothetical protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D HP_1051 predicted coding region HP1051 K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D HP_1584 sialoglycoprotease (gcp) K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D HP_0716 conserved hypothetical protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D HP_1248 virulence associated protein homolog (vacB) K12573 rnr; ribonuclease R [EC:3.1.13.1] D HP_1213 polynucleotide phosphorylase (pnp) K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:hpy03012] D HP_1048 translation initiation factor IF-2 (infB) K02519 infB; translation initiation factor IF-2 D HP_0124 translation initiation factor IF-3 (infC) K02520 infC; translation initiation factor IF-3 D HP_1555 translation elongation factor EF-Ts (tsf) K02357 tsf; elongation factor Ts D HP_1205 translation elongation factor EF-Tu (tufB) K02358 tuf; elongation factor Tu D HP_1195 translation elongation factor EF-G (fusA) K02355 fusA; elongation factor G D HP_0077 peptide chain release factor RF-1 (prfA) K02835 prfA; peptide chain release factor 1 D HP_1256 ribosome releasing factor (frr) K02838 frr; ribosome recycling factor D HP_0381 protoporphyrinogen oxidase (hemK) K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D HP_1497 peptidyl-tRNA hydrolase (pth) K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D HP_1298 translation initiation factor EF-1 (infA) K02518 infA; translation initiation factor IF-1 D HP_0177 translation elongation factor EF-P (efp) K02356 efp; elongation factor P D HP_0171 peptide chain release factor RF-2 (prfB) K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:hpy03110] D HP_0033 ATP-dependent C1p protease (clpA) K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D HP_0264 ATP-dependent protease binding subunit (clpB) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D HP_1374 ATP-dependent protease ATPase subunit (clpX) K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D HP_0516 heat shock protein (hslU) ORF1 K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D HP_0210 chaperone and heat shock protein C62.5 (htpG) K04079 HSP90A; molecular chaperone HtpG D HP_0109 chaperone and heat shock protein 70 (dnaK) K04043 dnaK; molecular chaperone DnaK D HP_0010 chaperone and heat shock protein (groEL) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HP_1332 co-chaperone and heat shock protein (dnaJ) K03686 dnaJ; molecular chaperone DnaJ D HP_1024 co-chaperone-curved DNA binding protein A (CbpA) K05516 cbpA; curved DNA-binding protein D HP_0110 co-chaperone and heat shock protein (grpE) K03687 GRPE; molecular chaperone GrpE D HP_0011 co-chaperone (groES) K04078 groES; chaperonin GroES D HP_1069 cell division protein (ftsH) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D HP_0828 ATP synthase F0, subunit a (atpB) K02108 ATPF0A; F-type H+-transporting ATPase subunit a D HP_0869 hydrogenase expression/formation protein (hypA) K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D HP_0900 hydrogenase expression/formation protein (hypB) K04652 hypB; hydrogenase nickel incorporation protein HypB D HP_1441 peptidyl-prolyl cis-trans isomerase B, cyclosporin-type rotamase (ppi) K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D HP_0977 conserved hypothetical secreted protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D HP_1123 peptidyl-prolyl cis-trans isomerase, FKBP-type rotamase (slyD) K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D HP_0824 thioredoxin (trxA) K03671 TXN; thioredoxin D HP_0231 predicted coding region HP0231 K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D HP_0377 thiol:disulfide interchange protein (dsbC), putative K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] C 04131 Membrane trafficking [BR:hpy04131] D HP_0198 nucleoside diphosphate kinase (ndk) K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D HP_0921 glyceraldehyde-3-phosphate dehydrogenase (gap) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HP_1346 glyceraldehyde-3-phosphate dehydrogenase (gap) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HP_0210 chaperone and heat shock protein C62.5 (htpG) K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:hpy04121] C 03051 Proteasome [BR:hpy03051] D HP_0210 chaperone and heat shock protein C62.5 (htpG) K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:hpy03032] D HP_0661 ribonuclease H (rnhA) K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D HP_0051 cytosine specific DNA methyltransferase (DDEM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_0054 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_1121 cytosine specific DNA methyltransferase (BSP6IM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_0835 histone-like DNA-binding protein HU (hup) K03530 hupB; DNA-binding protein HU-beta D HP_1529 chromosomal replication initiator protein (dnaA) K02313 dnaA; chromosomal replication initiator protein D HP_1362 replicative DNA helicase (dnaB) K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D HP_0012 DNA primase (dnaG) K02316 dnaG; DNA primase [EC:2.7.7.101] D HP_1245 single-strand DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D HP_1460 DNA polymerase III alpha-subunit (dnaE) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HP_0500 DNA polymerase III beta-subunit (dnaN) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HP_1247 predicted coding region HP1247 K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HP_1231 DNA polymerase III delta prime subunit (holB) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HP_1387 DNA polymerase III epsilon subunit (dnaQ) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HP_0717 DNA polymerase III gamma and tau subunits (dnaX) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HP_1323 ribonuclease HII (rnhB) K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D HP_0615 DNA ligase (lig) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HP_0701 DNA gyrase, sub A (gyrA) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HP_0501 DNA gyrase, sub B (gyrB) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HP_0116 DNA topoisomerase I (topA) K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HP_0440 DNA topoisomerase I (topA) K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:hpy03036] D HP_0051 cytosine specific DNA methyltransferase (DDEM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_0054 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_1121 cytosine specific DNA methyltransferase (BSP6IM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_0662 ribonuclease III (rnc) K03685 rnc; ribonuclease III [EC:3.1.26.3] D HP_0835 histone-like DNA-binding protein HU (hup) K03530 hupB; DNA-binding protein HU-beta D HP_1024 co-chaperone-curved DNA binding protein A (CbpA) K05516 cbpA; curved DNA-binding protein D HP_1529 chromosomal replication initiator protein (dnaA) K02313 dnaA; chromosomal replication initiator protein D HP_0243 neutrophil activating protein (napA) (bacterioferritin) K04047 dps; starvation-inducible DNA-binding protein D HP_0978 cell division protein (ftsA) protein K03590 ftsA; cell division protein FtsA D HP_0748 cell division protein (ftsE) K09812 ftsE; cell division transport system ATP-binding protein D HP_1556 cell division protein (ftsI) K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D HP_1090 cell division protein (ftsK) K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D HP_1560 cell division protein (ftsW) K03588 ftsW; cell division protein FtsW D HP_0749 cell division membrane protein (ftsX) K09811 ftsX; cell division transport system permease protein D HP_0979 cell divison protein (ftsZ) K03531 ftsZ; cell division protein FtsZ D HP_0772 N-acetylmuramoyl-L-alanine amidase (amiA) K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D HP_1053 predicted coding region HP1053 K03610 minC; septum site-determining protein MinC D HP_0331 cell division inhibitor (minD) K03609 minD; septum site-determining protein MinD D HP_0332 cell division topological specificity factor (minE) K03608 minE; cell division topological specificity factor D HP_1373 rod shape-determining protein (mreB) K03569 mreB; rod shape-determining protein MreB and related proteins D HP_1372 rod shape-determining protein (mreC) K03570 mreC; rod shape-determining protein MreC D HP_0743 rod shape-determining protein (mreB) K05837 rodA; rod shape determining protein RodA D HP_1000 PARA protein K03496 parA; chromosome partitioning protein D HP_1139 SpoOJ regulator (soj) K03496 parA; chromosome partitioning protein D HP_1138 plasmid replication-partition related protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D HP_0213 glucose inhibited division protein (gidA) K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D HP_1063 glucose-inhibited division protein (gidB) K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D HP_0675 integrase/recombinase (xerC) K04763 xerD; integrase/recombinase XerD D HP_0207 ATP-binding protein (mpr) K03593 mrp; ATP-binding protein involved in chromosome partitioning D HP_1159 cell filamentation protein (fic) K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D HP_1567 conserved hypothetical GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:hpy03400] D HP_0676 methylated-DNA--protein-cysteine methyltransferase (dat1) K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D HP_1347 uracil-DNA glycosylase (ung) K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D HP_0142 A/G-specific adenine glycosylase (mutY) K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D HP_0585 endonuclease III (nth) K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D HP_0865 deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D HP_0650 predicted coding region HP0650 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D HP_1526 exodeoxyribonuclease (lexA) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D HP_0348 single-stranded-DNA-specific exonuclease (recJ) K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D HP_0615 DNA ligase (lig) K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D HP_0705 excinuclease ABC subunit A (uvrA) K03701 uvrA; excinuclease ABC subunit A D HP_1114 excinuclease ABC subunit B (uvrB) K03702 uvrB; excinuclease ABC subunit B D HP_0821 excinuclease ABC subunit C (uvrC) K03703 uvrC; excinuclease ABC subunit C D HP_0911 rep helicase, single-stranded DNA-dependent ATPase (rep) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HP_1478 DNA helicase II (uvrD) K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D HP_1198 DNA-directed RNA polymerase, beta subunit (rpoB) K13797 rpoBC; DNA-directed RNA polymerase subunit beta-beta' [EC:2.7.7.6] D HP_1293 DNA-directed RNA polymerase, alpha subunit (rpoA) K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D HP_0776 predicted coding region HP0776 K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D HP_1541 transcription-repair coupling factor (trcF) K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D HP_0621 DNA mismatch repair protein (MutS) K07456 mutS2; DNA mismatch repair protein MutS2 D HP_0259 exonuclease VII, large subunit (xseA) K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D HP_1482 predicted coding region HP1482 K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D HP_1460 DNA polymerase III alpha-subunit (dnaE) K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D HP_0500 DNA polymerase III beta-subunit (dnaN) K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D HP_1247 predicted coding region HP1247 K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D HP_1231 DNA polymerase III delta prime subunit (holB) K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D HP_1387 DNA polymerase III epsilon subunit (dnaQ) K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D HP_0717 DNA polymerase III gamma and tau subunits (dnaX) K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D HP_1245 single-strand DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D HP_0153 recombinase (recA) K03553 recA; recombination protein RecA D HP_0883 Holliday junction DNA helicase (ruvA) K03550 ruvA; holliday junction DNA helicase RuvA D HP_1059 Holliday junction DNA helicase (ruvB) K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D HP_0877 Holliday junction endodeoxyribonuclease (ruvC) K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D HP_0387 primosomal protein replication factor (priA) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D HP_0223 ATP-dependent protease (sms) K04485 radA; DNA repair protein RadA/Sms D HP_1523 DNA recombinase (recG) K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D HP_0925 recombinational DNA repair protein (recR) K06187 recR; recombination protein RecR D HP_1393 DNA repair protein (recN) K03631 recN; DNA repair protein RecN (Recombination protein N) D HP_0701 DNA gyrase, sub A (gyrA) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D HP_0501 DNA gyrase, sub B (gyrB) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D HP_0116 DNA topoisomerase I (topA) K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HP_0440 DNA topoisomerase I (topA) K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D HP_0835 histone-like DNA-binding protein HU (hup) K03530 hupB; DNA-binding protein HU-beta D HP_0680 ribonucleoside-diphosphate reductase 1 alpha subunit (nrdA) K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D HP_0364 ribonucleoside diphosphate reductase, beta subunit (nrdB) K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:hpy03029] D HP_1539 ubiquinol cytochrome c oxidoreductase, cytochrome b subunit (fbcH) K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D HP_1048 translation initiation factor IF-2 (infB) K02519 infB; translation initiation factor IF-2 D HP_0124 translation initiation factor IF-3 (infC) K02520 infC; translation initiation factor IF-3 D HP_1555 translation elongation factor EF-Ts (tsf) K02357 tsf; elongation factor Ts D HP_1205 translation elongation factor EF-Tu (tufB) K02358 tuf; elongation factor Tu D HP_1195 translation elongation factor EF-G (fusA) K02355 fusA; elongation factor G D HP_0517 GTP-binding protein (era) K03595 era; GTPase D HP_0774 tyrosyl-tRNA synthetase (tyrS) K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D HP_1547 leucyl-tRNA synthetase (leuS) K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D HP_0617 aspartyl-tRNA synthetase (aspS) K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D HP_0319 arginyl-tRNA synthetase (argS) K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D HP_0830 Glu-tRNA(Gln) amidotransferase, subunit A (gatA) K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D HP_0658 Glu-tRNA(Gln) amidotransferase, subunit B (gatB) K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D HP_0975 Glu-tRNA(Gln) amidotransferase, subunit C (gatC) K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D HP_1382 predicted coding region HP1382 K01173 ENDOG; endonuclease G, mitochondrial D HP_1245 single-strand DNA-binding protein (ssb) K03111 ssb; single-strand DNA-binding protein D HP_0655 protective surface antigen D15 K07277 SAM50; outer membrane protein insertion porin family D HP_0109 chaperone and heat shock protein 70 (dnaK) K04043 dnaK; molecular chaperone DnaK D HP_0110 co-chaperone and heat shock protein (grpE) K03687 GRPE; molecular chaperone GrpE D HP_0010 chaperone and heat shock protein (groEL) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HP_0011 co-chaperone (groES) K04078 groES; chaperonin GroES D HP_1332 co-chaperone and heat shock protein (dnaJ) K03686 dnaJ; molecular chaperone DnaJ D HP_0220 synthesis of [Fe-S] cluster (nifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D HP_0207 ATP-binding protein (mpr) K03593 mrp; ATP-binding protein involved in chromosome partitioning D HP_1450 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HP_0210 chaperone and heat shock protein C62.5 (htpG) K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:hpy02000] D HP_1082 multidrug resistance protein (msbA) K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D HP_1206 multidrug resistance protein (hetA) K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-] D HP_0473 molybdenum ABC transporter, periplasmic molybdate-binding protein (modA) K02020 modA; molybdate transport system substrate-binding protein D HP_0474 molybdenum ABC transporter, permease protein (modB) K02018 modB; molybdate transport system permease protein D HP_0475 molybdenum ABC transporter, ATP-binding protein (modD) K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D HP_0818 osmoprotection protein (proWX) K05845 opuC; osmoprotectant transport system substrate-binding protein D HP_0819 osmoprotection protein (proV) K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D HP_1464 conserved hypothetical secreted protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D HP_1466 conserved hypothetical integral membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D HP_1465 ABC transporter, ATP-binding protein (HI1087) K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D HP_1463 predicted coding region HP1463 K18480 linN; cholesterol transport system auxiliary component D HP_0940 amino acid ABC transporter, periplasmic binding protein (yckK) K02424 tcyA; L-cystine transport system substrate-binding protein D HP_0939 amino acid ABC transporter, permease protein (yckJ) K10009 tcyB; L-cystine transport system permease protein D HP_1564 outer membrane protein K02073 metQ; D-methionine transport system substrate-binding protein D HP_1577 ABC transporter, permease protein (yaeE) K02072 metI; D-methionine transport system permease protein D HP_1576 ABC transporter, ATP-binding protein (abc) K02071 metN; D-methionine transport system ATP-binding protein D HP_1172 glutamine ABC transporter, periplasmic glutamine-binding protein (glnH) K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D HP_1169 glutamine ABC transporter, permease protein (glnP) K02029 ABC.PA.P; polar amino acid transport system permease protein D HP_1170 glutamine ABC transporter, permease protein (glnP) K02029 ABC.PA.P; polar amino acid transport system permease protein D HP_1171 glutamine ABC transporter, ATP-binding protein (glnQ) K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D HP_0298 dipeptide ABC transporter, periplasmic dipeptide-binding protein (dppA) K12368 dppA; dipeptide transport system substrate-binding protein D HP_0299 dipeptide ABC transporter, permease protein (dppB) K12369 dppB; dipeptide transport system permease protein D HP_0300 dipeptide ABC transporter, permease protein (dppC) K12370 dppC; dipeptide transport system permease protein D HP_0301 dipeptide ABC transporter, ATP-binding protein (dppD) K12371 dppD; dipeptide transport system ATP-binding protein D HP_0302 dipeptide ABC transporter, ATP-binding protein (dppF) K12372 dppF; dipeptide transport system ATP-binding protein D HP_1252 oligopeptide ABC transporter, periplasmic oligopeptide-binding protein (oppA) K13893 yejA; microcin C transport system substrate-binding protein D HP_1251 oligopeptide ABC transporter, permease protein (oppB) K13894 yejB; microcin C transport system permease protein D HP_0251 oligopeptide ABC transporter, permease protein (oppC) K13895 yejE; microcin C transport system permease protein D HP_0250 oligopeptide ABC transporter, ATP-binding protein (oppD) K13896 yejF; microcin C transport system ATP-binding protein D HP_1561 iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D HP_1562 iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D HP_0889 iron(III) dicitrate ABC transporter, permease protein (fecD) K02015 ABC.FEV.P; iron complex transport system permease protein D HP_0888 iron(III) dicitrate ABC transporter, ATP-binding protein (fecE) K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D HP_0362 conserved hypothetical integral membrane protein K07091 lptF; lipopolysaccharide export system permease protein D HP_1498 predicted coding region HP1498 K11720 lptG; lipopolysaccharide export system permease protein D HP_0715 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D HP_0749 cell division membrane protein (ftsX) K09811 ftsX; cell division transport system permease protein D HP_0748 cell division protein (ftsE) K09812 ftsE; cell division transport system ATP-binding protein D HP_1486 conserved hypothetical integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D HP_1487 conserved hypothetical integral membrane protein K01992 ABC-2.P; ABC-2 type transport system permease protein D HP_1220 ABC transporter, ATP-binding protein (yhcG) K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D HP_0787 conserved hypothetical integral membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein D HP_0179 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D HP_0214 sodium-dependent transporter (huNaDC-1) K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 D HP_0759 conserved hypothetical integral membrane protein K26939 norM; MATE family, multidrug efflux pump D HP_1184 conserved hypothetical integral membrane protein K26937 dinF; MATE family, multidrug efflux pump D HP_1174 glucose/galactose transporter (gluP) K02429 fucP; MFS transporter, FHS family, L-fucose permease D HP_1091 alpha-ketoglutarate permease (kgtP) K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D HP_0936 proline/betaine transporter (proP) K03762 proP; MFS transporter, MHS family, proline/betaine transporter D HP_1185 conserved hypothetical integral membrane protein K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D HP_0490 putative potassium channel protein, putative K10716 kch; voltage-gated potassium channel D HP_0920 conserved hypothetical integral membrane protein K19416 yccA; modulator of FtsH protease D HP_0983 conserved hypothetical integral membrane protein K03442 mscS; small conductance mechanosensitive channel D HP_0415 conserved hypothetical integral membrane protein K16052 ynaI; MscS family membrane protein D HP_0071 urease accessory protein (ureI) K03191 ureI; acid-activated urea channel D HP_0815 flagellar motor rotation protein (motA) K02556 motA; chemotaxis protein MotA D HP_0816 flagellar motor rotation protein (motB) K02557 motB; chemotaxis protein MotB D HP_1339 biopolymer transport protein (exbB) K03561 exbB; biopolymer transport protein ExbB D HP_1445 biopolymer transport protein (exbB) K03561 exbB; biopolymer transport protein ExbB D HP_1129 biopolymer transport protein (exbD) K03559 exbD; biopolymer transport protein ExbD D HP_1340 biopolymer transport protein (exbD) K03559 exbD; biopolymer transport protein ExbD D HP_1446 biopolymer transport protein (exbD) K03559 exbD; biopolymer transport protein ExbD D HP_1344 magnesium and cobalt transport protein (corA) K03284 corA; magnesium transporter D HP_1225 conserved hypothetical integral membrane protein K06199 crcB; fluoride exporter D HP_1490 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D HP_0887 vacuolating cytotoxin K11028 vacA; vacuolating cytotoxin D HP_0686 iron(III) dicitrate transport protein (fecA) K16091 fecA; Fe(3+) dicitrate transport protein D HP_0807 iron(III) dicitrate transport protein (fecA) K16091 fecA; Fe(3+) dicitrate transport protein D HP_1400 iron(III) dicitrate transport protein (fecA) K16091 fecA; Fe(3+) dicitrate transport protein D HP_0876 iron-regulated outer membrane protein (frpB) K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HP_0916 iron-regulated outer membrane protein (frpB) K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HP_1512 iron-regulated outer membrane protein (frpB) K02014 TC.FEV.OM; iron complex outermembrane recepter protein D HP_0655 protective surface antigen D15 K07277 SAM50; outer membrane protein insertion porin family D HP_1378 competence lipoprotein (comL) K05807 bamD; outer membrane protein assembly factor BamD D HP_1568 predicted coding region HP1568 K09774 lptA; lipopolysaccharide export system protein LptA D HP_0969 cation efflux system protein (czcA) K15726 czcA; heavy metal efflux system protein D HP_1329 cation efflux system protein (czcA) K07787 cusA; copper/silver efflux system protein D HP_0758 conserved hypothetical integral membrane protein K07084 yuiF; putative amino acid transporter D HP_0724 anaerobic C4-dicarboxylate transport protein (dcuA) K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D HP_0140 L-lactate permease (lctP) K03303 lutP; lactate permease D HP_0141 L-lactate permease (lctP) K03303 lutP; lactate permease D HP_0055 proline permease (putP) K11928 putP; sodium/proline symporter D HP_1506 glutamate permease (gltS) K03312 gltS; glutamate:Na+ symporter, ESS family D HP_1552 Na+/H+ antiporter (nhaA) K03313 nhaA; Na+:H+ antiporter, NhaA family D HP_0471 glutathione-regulated potassium-efflux system protein (kefB) K03455 KEA1_2_3; K+:H+ antiporter D HP_1175 conserved hypothetical integral membrane protein K06901 pbuG; adenine/guanine/hypoxanthine permease D HP_0133 serine transporter (sdaC) K03837 sdaC; serine transporter D HP_1077 nickel transport protein (nixA) K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D HP_0228 conserved hypothetical integral membrane protein K03321 TC.SULP; sulfate permease, SulP family D HP_0885 virulence factor mviN protein (mviN) K03980 murJ; putative peptidoglycan lipid II flippase D HP_0718 conserved hypothetical integral membrane protein K06895 lysE; L-lysine exporter family protein LysE/ArgO D HP_1331 conserved hypothetical integral membrane protein K26605 azlC; branched chain amino acid efflux pump D HP_1330 conserved hypothetical integral membrane protein K26606 azlD; branched chain amino acid efflux pump D HP_1560 cell division protein (ftsW) K03588 ftsW; cell division protein FtsW D HP_1341 siderophore-mediated iron transport protein (tonB) K03832 tonB; periplasmic protein TonB D HP_1125 peptidoglycan associated lipoprotein precursor (omp18) K03640 pal; peptidoglycan-associated lipoprotein D HP_1126 colicin tolerance-like protein (tolB) K03641 tolB; TolB protein D HP_0265 cytochrome c biogenesis protein (ccdA) K06196 ccdA; cytochrome c-type biogenesis protein D HP_0407 biotin sulfoxide reductase (bisC) K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D HP_1290 nicotinamide mononucleotide transporter (pnuC) K03811 pnuC; nicotinamide mononucleotide transporter D HP_0687 iron(II) transport protein (feoB) K04759 feoB; ferrous iron transport protein B C 02044 Secretion system [BR:hpy02044] D HP_0644 conserved hypothetical integral membrane protein K02221 yggT; YggT family protein D HP_1361 competence locus E (comE3) K02238 comEC; competence protein ComEC D HP_1473 predicted coding region HP1473 K02242 comFC; competence protein ComFC D HP_1041 flagellar biosynthesis protein (flhA) K02400 flhA; flagellar biosynthesis protein FlhA D HP_0770 flagellar biosynthetic protein (flhB) K02401 flhB; flagellar biosynthesis protein FlhB D HP_1575 ABC transporter, putative K04061 flhB2; flagellar biosynthesis protein D HP_0351 flagellar basal-body M-ring protein (fliF) K02409 fliF; flagellar M-ring protein FliF D HP_0353 flagellar export protein (fliH) K02411 fliH; flagellar assembly protein FliH D HP_1420 flagellar export protein ATP synthase (fliI) K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HP_0584 flagellar switch protein (fliN) K02417 fliN; flagellar motor switch protein FliN D HP_1030 fliY protein (fliY) K02417 fliN; flagellar motor switch protein FliN D HP_1419 flagellar biosynthetic protein (fliQ) K02420 fliQ; flagellar biosynthesis protein FliQ D HP_0173 flagellar biosynthetic protein (fliR) K02421 fliR; flagellar biosynthesis protein FliR D HP_0441 VirB4 homolog K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8] D HP_0439 predicted coding region HP0439 K03203 virB8; type IV secretion system protein VirB8 D HP_0525 virB11 homolog K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D HP_1421 conjugative transfer regulon protein (trbB) K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8] D HP_1006 conjugal transfer protein (traG) K03205 virD4; type IV secretion system protein VirD4 [EC:7.4.2.8] D HP_0038 predicted coding region HP0038 K12050 comB8; ComB8 competence protein D HP_0037 NADH-ubiquinone oxidoreductase subunit K12052 comB6; ComB6 competence protein D HP_0017 virB4 homolog (virB4) K12053 comB4; ComB4 competence protein D HP_0459 virB4 homolog (virB4) K12053 comB4; ComB4 competence protein D HP_0231 predicted coding region HP0231 K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D HP_0377 thiol:disulfide interchange protein (dsbC), putative K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D HP_0520 cag pathogenicity island protein (cag1) K12086 cag1; cag pathogenicity island protein 1 D HP_0522 cag pathogenicity island protein (cag3) K12088 cag3; cag pathogenicity island protein 3 D HP_0523 cag pathogenicity island protein (cag4) K12089 cag4; cag pathogenicity island protein 4 D HP_0524 cag pathogenicity island protein (cag5) K12090 cag5; cag pathogenicity island protein 5 D HP_0526 cag pathogenicity island protein (cag6) K12091 cag6; cag pathogenicity island protein 6 D HP_0527 cag pathogenicity island protein (cag7) K12092 cag7; cag pathogenicity island protein 7 D HP_0528 cag pathogenicity island protein (cag8) K12093 cag8; cag pathogenicity island protein 8 D HP_0529 cag pathogenicity island protein (cag9) K12094 cag9; cag pathogenicity island protein 9 D HP_0530 cag pathogenicity island protein (cag10) K12095 cag10; cag pathogenicity island protein 10 D HP_0531 cag pathogenicity island protein (cag11) K12096 cag11; cag pathogenicity island protein 11 D HP_0532 cag pathogenicity island protein (cag12) K12097 cag12; cag pathogenicity island protein 12 D HP_0534 cag pathogenicity island protein (cag13) K12098 cag13; cag pathogenicity island protein 13 D HP_0535 cag pathogenicity island protein (cag14) K12099 cag14; cag pathogenicity island protein 14 D HP_0536 cag pathogenicity island protein (cag15) K12100 cag15; cag pathogenicity island protein 15 D HP_0537 cag pathogenicity island protein (cag16) K12101 cag16; cag pathogenicity island protein 16 D HP_0538 cag pathogenicity island protein (cag17) K12102 cag17; cag pathogenicity island protein 17 D HP_0539 cag pathogenicity island protein (cag18) K12103 cag18; cag pathogenicity island protein 18 D HP_0540 cag pathogenicity island protein (cag19) K12104 cag19; cag pathogenicity island protein 19 D HP_0541 cag pathogenicity island protein (cag20) K12105 cag20; cag pathogenicity island protein 20 D HP_0542 cag pathogenicity island protein (cag21) K12106 cag21; cag pathogenicity island protein 21 D HP_0543 cag pathogenicity island protein (cag22) K12107 cag22; cag pathogenicity island protein 22 D HP_0544 cag pathogenicity island protein (cag23) K12108 cag23; cag pathogenicity island protein 23 [EC:7.4.2.8] D HP_0545 cag pathogenicity island protein (cag24) K12109 cag24; cag pathogenicity island protein 24 D HP_0546 cag pathogenicity island protein (cag25) K12110 cag25; cag pathogenicity island protein 25 D HP_0887 vacuolating cytotoxin K11028 vacA; vacuolating cytotoxin D HP_0786 preprotein translocase subunit (secA) K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D HP_1549 protein-export membrane protein (secF) K03074 secF; preprotein translocase subunit SecF D HP_1255 protein translocation protein, low temperature (secG) K03075 secG; preprotein translocase subunit SecG D HP_1300 preprotein translocase subunit (secY) K03076 secY; preprotein translocase subunit SecY D HP_1152 signal recognition particle protein (ffh) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D HP_0763 cell division protein (ftsY) K03110 ftsY; fused signal recognition particle receptor D HP_1551 conserved hypothetical secreted protein K03210 yajC; preprotein translocase subunit YajC D HP_1450 60 kDa inner-membrane protein K03217 yidC; YidC/Oxa1 family membrane protein insertase D HP_0320 conserved hypothetical secreted protein K03116 tatA; sec-independent protein translocase protein TatA D HP_1060 predicted coding region HP1060 K03117 tatB; sec-independent protein translocase protein TatB D HP_1061 conserved hypothetical integral membrane protein K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:hpy02042] D HP_0887 vacuolating cytotoxin K11028 vacA; vacuolating cytotoxin D HP_1490 conserved hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:hpy02022] D HP_1364 signal-transducing protein, histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D HP_0166 response regulator (ompR) K02483 K02483; two-component system, OmpR family, response regulator D HP_1043 response regulator K02483 K02483; two-component system, OmpR family, response regulator D HP_1365 response regulator K02483 K02483; two-component system, OmpR family, response regulator D HP_0244 signal-transducing protein, histidine kinase (atoS) K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D HP_0703 response regulator K02481 flgR; two-component system, NtrC family, response regulator D HP_0392 histidine kinase (cheA) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HP_1067 chemotaxis protein (cheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HP_0019 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0393 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0616 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV C 02035 Bacterial motility proteins [BR:hpy02035] D HP_0392 histidine kinase (cheA) K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D HP_0391 purine-binding chemotaxis protein (cheW) K03408 cheW; purine-binding chemotaxis protein CheW D HP_1067 chemotaxis protein (cheY) K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D HP_0019 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0393 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0616 chemotaxis protein (cheV) K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D HP_0082 methyl-accepting chemotaxis transducer (tlpC) K03406 mcp; methyl-accepting chemotaxis protein D HP_0099 methyl-accepting chemotaxis protein (tlpA) K03406 mcp; methyl-accepting chemotaxis protein D HP_0103 methyl-accepting chemotaxis protein (tlpB) K03406 mcp; methyl-accepting chemotaxis protein D HP_0353 flagellar export protein (fliH) K02411 fliH; flagellar assembly protein FliH D HP_1420 flagellar export protein ATP synthase (fliI) K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D HP_1419 flagellar biosynthetic protein (fliQ) K02420 fliQ; flagellar biosynthesis protein FliQ D HP_0173 flagellar biosynthetic protein (fliR) K02421 fliR; flagellar biosynthesis protein FliR D HP_1041 flagellar biosynthesis protein (flhA) K02400 flhA; flagellar biosynthesis protein FlhA D HP_0770 flagellar biosynthetic protein (flhB) K02401 flhB; flagellar biosynthesis protein FlhB D HP_0352 flagellar motor switch protein (fliG) K02410 fliG; flagellar motor switch protein FliG D HP_1031 flagellar motor switch protein (fliM) K02416 fliM; flagellar motor switch protein FliM D HP_0584 flagellar switch protein (fliN) K02417 fliN; flagellar motor switch protein FliN D HP_1030 fliY protein (fliY) K02417 fliN; flagellar motor switch protein FliN D HP_0351 flagellar basal-body M-ring protein (fliF) K02409 fliF; flagellar M-ring protein FliF D HP_0246 flagellar basal-body P-ring protein (flgI) K02394 flgI; flagellar P-ring protein FlgI D HP_1477 predicted coding region HP1477 K02386 flgA; flagellar basal body P-ring formation protein FlgA D HP_0325 flagellar basal-body L-ring protein (flgH) K02393 flgH; flagellar L-ring protein FlgH D HP_0809 predicted coding region HP0809 K02415 fliL; flagellar protein FliL D HP_1557 flagellar basal-body protein (fliE) K02408 fliE; flagellar hook-basal body complex protein FliE D HP_0906 predicted coding region HP0906 K02414 fliK; flagellar hook-length control protein FliK D HP_1559 flagellar basal-body rod protein (flgB) K02387 flgB; flagellar basal-body rod protein FlgB D HP_1558 flagellar basal-body rod protein (flgC) K02388 flgC; flagellar basal-body rod protein FlgC D HP_0907 hook assembly protein, flagella (flgD) K02389 flgD; flagellar basal-body rod modification protein FlgD D HP_1092 flagellar basal-body rod protein (flgG) K02391 flgF; flagellar basal-body rod protein FlgF D HP_1585 flagellar basal-body rod protein (flgG) K02392 flgG; flagellar basal-body rod protein FlgG D HP_0245 predicted coding region HP0245 K02395 flgJ; peptidoglycan hydrolase FlgJ D HP_0870 flagellar hook (flgE) K02390 flgE; flagellar hook protein FlgE D HP_0908 flagellar hook (flgE) K02390 flgE; flagellar hook protein FlgE D HP_1119 flagellar hook-associated protein 1 (HAP1) (flgK) K02396 flgK; flagellar hook-associated protein 1 D HP_0295 flagellin B homolog (fla) K02397 flgL; flagellar hook-associated protein 3 FlgL D HP_0115 flagellin B (flaB) K02406 fliC; flagellin D HP_0601 flagellin A (flaA) K02406 fliC; flagellin D HP_0752 flagellar hook-associated protein 2 (fliD) K02407 fliD; flagellar hook-associated protein 2 D HP_0753 flagellar protein (fliS) K02422 fliS; flagellar secretion chaperone FliS D HP_1032 alternative transcription initiation factor, sigma-F (fliA) K02405 fliA; RNA polymerase sigma factor FliA D HP_0815 flagellar motor rotation protein (motA) K02556 motA; chemotaxis protein MotA D HP_0816 flagellar motor rotation protein (motB) K02557 motB; chemotaxis protein MotB D HP_0940 amino acid ABC transporter, periplasmic binding protein (yckK) K02424 tcyA; L-cystine transport system substrate-binding protein D HP_1377 predicted coding region HP1377 K13626 fliW; flagellar assembly factor FliW D HP_0751 polar flagellin (flaG) K06603 flaG; flagellar protein FlaG D HP_1035 flagellar biosynthesis protein (flhF) K02404 flhF; flagellar biosynthesis protein FlhF D HP_1034 ATP-binding protein (ylxH) K04562 flhG; flagellar biosynthesis protein FlhG C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:hpy04812] D HP_1373 rod shape-determining protein (mreB) K03569 mreB; rod shape-determining protein MreB and related proteins D HP_0979 cell divison protein (ftsZ) K03531 ftsZ; cell division protein FtsZ D HP_0978 cell division protein (ftsA) protein K03590 ftsA; cell division protein FtsA D HP_1053 predicted coding region HP1053 K03610 minC; septum site-determining protein MinC D HP_0331 cell division inhibitor (minD) K03609 minD; septum site-determining protein MinD D HP_0332 cell division topological specificity factor (minE) K03608 minE; cell division topological specificity factor D HP_1000 PARA protein K03496 parA; chromosome partitioning protein D HP_1139 SpoOJ regulator (soj) K03496 parA; chromosome partitioning protein D HP_1138 plasmid replication-partition related protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:hpy04147] D HP_0210 chaperone and heat shock protein C62.5 (htpG) K04079 HSP90A; molecular chaperone HtpG D HP_0154 enolase (eno) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D HP_0921 glyceraldehyde-3-phosphate dehydrogenase (gap) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HP_1346 glyceraldehyde-3-phosphate dehydrogenase (gap) K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D HP_1345 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D HP_1563 alkyl hydroperoxide reductase (tsaA) K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D HP_0010 chaperone and heat shock protein (groEL) K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D HP_0109 chaperone and heat shock protein 70 (dnaK) K04043 dnaK; molecular chaperone DnaK D HP_1166 glucose-6-phosphate isomerase (pgi) K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D HP_0829 inosine-5'-monophosphate dehydrogenase (guaB) K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D HP_1205 translation elongation factor EF-Tu (tufB) K02358 tuf; elongation factor Tu D HP_0404 protein kinase C inhibitor (SP:P16436) K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D HP_0690 acetyl coenzyme A acetyltransferase (thiolase) (fadA) K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D HP_0618 adenylate kinase (adk) K00939 adk; adenylate kinase [EC:2.7.4.3] D HP_0572 adenine phosphoribosyltransferase (apt) K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D HP_1385 fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D HP_0512 glutamine synthetase (glnA) K01915 glnA; glutamine synthetase [EC:6.3.1.2] D HP_0163 delta-aminolevulinic acid dehydratase (hemB) K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D HP_0397 phosphoglycerate dehydrogenase (serA) K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D HP_1101 glucose-6-phosphate dehydrogenase (g6pD) K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D HP_0194 triosephosphate isomerase (tpi) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:hpy02048] D HP_0464 type I restriction enzyme R protein (hsdR) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D HP_0846 type I restriction enzyme R protein (hsdR) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D HP_1402 type I restriction enzyme R protein (hsdR) K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D HP_0462 type I restriction enzyme S protein (hsdS) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HP_0790 anti-codon nuclease masking agent (prrB) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HP_0848 type I restriction enzyme S protein (hsdS) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HP_1383 restriction modification system S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HP_1404 type I restriction enzyme S protein (hsdS) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D HP_0463 type I restriction enzyme M protein (hsdM) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D HP_0850 type I restriction enzyme M protein (hsdM) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D HP_1403 type I restriction enzyme M protein (hsdM) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D HP_0091 type II restriction enzyme R protein (hsdR) K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D HP_0262 predicted coding region HP0262 K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D HP_0910 adenine specific DNA methyltransferase (HINDIIM) K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HP_1208 ulcer associated adenine specific DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HP_0050 adenine specific DNA methyltransferase (dpnA) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HP_0092 type II restriction enzyme M protein (hsdM) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HP_0263 adenine specific DNA methyltransferase (hpaim) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HP_0478 adenine specific DNA methyltransferase (VSPIM) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HP_1352 adenine specific DNA methyltransferase (HINFIM) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HP_1367 type IIS restriction enzyme M1 protein (mod) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HP_1472 type IIS restriction enzyme M protein (mod) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HP_1517 type IIS restriction enzyme R and M protein (ECO57IR) K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] D HP_0051 cytosine specific DNA methyltransferase (DDEM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_0054 adenine/cytosine DNA methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_1121 cytosine specific DNA methyltransferase (BSP6IM) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D HP_1368 type IIS restriction enzyme M2 protein (mod) K24451 zim; modification methylase D HP_0592 type III restriction enzyme R protein (res) K01156 res; type III restriction enzyme [EC:3.1.21.5] D HP_1521 type III restriction enzyme R protein (res) K01156 res; type III restriction enzyme [EC:3.1.21.5] D HP_0260 adenine specific DNA methyltransferase (mod) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D HP_0979 cell divison protein (ftsZ) K03531 ftsZ; cell division protein FtsZ D HP_1373 rod shape-determining protein (mreB) K03569 mreB; rod shape-determining protein MreB and related proteins D HP_0476 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0643 glutamyl-tRNA synthetase (gltX) K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D HP_0220 synthesis of [Fe-S] cluster (nifS) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:hpy04090] C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:hpy03100] D HP_t11 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HP_t09 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D HP_t17 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D HP_t08 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D HP_t02 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D HP_t24 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D HP_t21 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D HP_t22 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HP_t31 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D HP_t15 tRNA-His K14226 tRNA-His; tRNA His D HP_t12 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D HP_t13 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D HP_t28 tRNA-Met K14230 tRNA-Met; tRNA Met D HP_t36 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D HP_t14 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D HP_t25 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D HP_t33 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D HP_t29 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D HP_t32 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D HP_t03 tRNA-Val K14237 tRNA-Val; tRNA Val D HP_r04 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D HP_1507 conserved hypothetical ATP-binding protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55] D HP_0630 modulator of drug activity (mda66) K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D HP_0224 peptide methionine sulfoxide reductase (msrA) K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12] D HP_1461 cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D HP_0136 bacterioferritin comigratory protein (bcp) K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HP_0390 adhesin-thiol peroxidase (tagD) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D HP_0632 quinone-reactive Ni/Fe hydrogenase, large subunit (hydB) K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1] D HP_0631 quinone-reactive Ni/Fe hydrogenase, small subunit (hydA) K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1] D HP_0653 nonheme iron-containing ferritin (pfr) K02217 ftnA; ferritin [EC:1.16.3.2] D HP_0363 L-isoaspartyl-protein carboxyl methyltransferase (pcm) K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D HP_0416 cyclopropane fatty acid synthase (cfa) K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D HP_0180 apolipoprotein N-acyltransferase (cute) K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D HP_0955 prolipoprotein diacylglyceryl transferase (lgt) K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D HP_0578 predicted coding region HP0578 K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D HP_0496 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D HP_1573 conserved hypothetical protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D HP_0339 predicted coding region HP0339 K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D HP_0793 polypeptide deformylase (def) K01462 PDF; peptide deformylase [EC:3.5.1.88] D HP_0310 conserved hypothetical protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104] D HP_0944 conserved hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D HP_1363 conserved hypothetical integral membrane protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D HP_0175 cell binding factor 2 K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D HP_0696 N-methylhydantoinase K10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6] D HP_0695 hydantoin utilization protein A (hyuA) K10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6] D HP_0697 predicted coding region HP0697 K10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6] D HP_0791 cadmium-transporting ATPase, P-type (cadA) K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism D HP_0139 conserved hypothetical secreted protein K18928 lldE; L-lactate dehydrogenase complex protein LldE D HP_0138 conserved hypothetical iron-sulfur protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D HP_0137 predicted coding region HP0137 K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D HP_0221 nifU-like protein K13819 K13819; NifU-like protein D HP_1161 flavodoxin (fldA) K03839 fldA; flavodoxin I C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D HP_0395 conserved hypothetical protein K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D HP_0805 lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B) K07270 K07270; glycosyl transferase, family 25 D HP_0826 lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B) K07270 K07270; glycosyl transferase, family 25 C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D HP_0032 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D HP_0795 trigger factor (tig) K03545 tig; trigger factor D HP_0070 urease accessory protein (ureE) K03187 ureE; urease accessory protein D HP_0069 urease accessory protein (ureF) K03188 ureF; urease accessory protein D HP_0068 urease accessory protein (ureG) K03189 ureG; urease accessory protein D HP_0067 urease accessory protein (ureH) K03190 ureD; urease accessory protein D HP_1444 small protein (smpB) K03664 smpB; SsrA-binding protein D HP_0899 hydrogenase expression/formation protein (hypC) K04653 hypC; hydrogenase expression/formation protein HypC D HP_0898 hydrogenase expression/formation protein (hypD) K04654 hypD; hydrogenase expression/formation protein HypD D HP_0047 hydrogenase expression/formation protein (hypE) K04655 hypE; hydrogenase expression/formation protein HypE D HP_0048 transcriptional regulator (hypF) K04656 hypF; hydrogenase maturation protein HypF D HP_0792 sigma-54 interacting protein K07391 comM; magnesium chelatase family protein C 99976 Replication and repair D HP_1080 conserved hypothetical integral membrane protein K07449 K07449; similar to archaeal holliday junction resolvase and Mrr protein D HP_0602 endonuclease III K07457 K07457; endonuclease III related protein D HP_0823 conserved hypothetical protein K07460 yraN; putative endonuclease D HP_0333 DNA processing chain A (dprA) K04096 smf; DNA processing protein D HP_1026 conserved hypothetical helicase-like protein K07478 ycaJ; putative ATPase D HP_0414 IS200 insertion sequence from SARA17 K07491 rayT; REP-associated tyrosine transposase D HP_0437 IS605 transposase (tnpA) K07491 rayT; REP-associated tyrosine transposase D HP_0988 IS605 transposase (tnpA) K07491 rayT; REP-associated tyrosine transposase D HP_0998 IS605 transposase (tnpA) K07491 rayT; REP-associated tyrosine transposase D HP_1008 IS200 insertion sequence from SARA17 K07491 rayT; REP-associated tyrosine transposase D HP_1096 IS605 transposase (tnpA) K07491 rayT; REP-associated tyrosine transposase D HP_1535 IS605 transposase (tnpA) K07491 rayT; REP-associated tyrosine transposase D HP_0438 IS605 transposase (tnpB) K07496 K07496; putative transposase D HP_0989 IS605 transposase (tnpB) K07496 K07496; putative transposase D HP_0997 IS605 transposase (tnpB) K07496 K07496; putative transposase D HP_1095 IS605 transposase (tnpB) K07496 K07496; putative transposase D HP_1534 IS605 transposase (tnpB) K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others D HP_0035 conserved hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D HP_1017 amino acid permease (rocE) K03293 TC.AAT; amino acid transporter, AAT family D HP_0607 acriflavine resistance protein (acrB) K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D HP_1491 phosphate permease K03306 TC.PIT; inorganic phosphate transporter, PiT family D HP_0497 sodium- and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D HP_0498 sodium- and chloride-dependent transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D HP_0942 D-alanine glycine permease (dagA) K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D HP_1180 pyrimidine nucleoside transport protein (nupC) K03317 TC.CNT; concentrative nucleoside transporter, CNT family C 99978 Cell growth D HP_1451 predicted coding region HP1451 K06346 jag; spoIIIJ-associated protein C 99993 Cell motility D HP_1457 predicted coding region HP1457 K07337 K07337; penicillin-binding protein activator C 99995 Signaling proteins D HP_1168 carbon starvation protein (cstA) K06200 cstA; carbon starvation protein D HP_0480 GTP-binding protein, fusA-homolog (yihK) K06207 typA; GTP-binding protein C 99992 Structural proteins D HP_0785 conserved hypothetical secreted protein K03634 lolA; outer membrane lipoprotein carrier protein D HP_1488 conserved hypothetical secreted protein K01993 ABC-2.TX; HlyD family secretion protein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D HP_0181 predicted coding region HP0181 K03558 cvpA; membrane protein required for colicin V production D HP_1407 conserved hypothetical integral membrane protein K07058 K07058; membrane protein D HP_1214 conserved hypothetical protein K07100 K07100; putative phosphoribosyl transferase D HP_0872 alkylphosphonate uptake protein (phnA) K06193 phnA; protein PhnA C 99997 Function unknown D HP_0746 predicted coding region HP0746 K06882 K06882; uncharacterized protein D HP_1079 predicted coding region HP1079 K06926 K06926; uncharacterized protein D HP_0274 conserved hypothetical protein K06940 K06940; uncharacterized protein D HP_0764 predicted coding region HP0764 K06940 K06940; uncharacterized protein D HP_1064 predicted coding region HP1064 K06950 K06950; uncharacterized protein D HP_1150 predicted coding region HP1150 K06960 K06960; uncharacterized protein D HP_0226 conserved hypothetical integral membrane protein K07090 K07090; uncharacterized protein D HP_0677 conserved hypothetical integral membrane protein K07090 K07090; uncharacterized protein D HP_1042 predicted coding region HP1042 K07097 K07097; uncharacterized protein D HP_1044 conserved hypothetical integral membrane protein K07098 K07098; uncharacterized protein D HP_0211 conserved hypothetical secreted protein K07126 K07126; uncharacterized protein D HP_0160 conserved hypothetical secreted protein K07126 K07126; uncharacterized protein D HP_0235 conserved hypothetical secreted protein K07126 K07126; uncharacterized protein D HP_0519 conserved hypothetical protein K07126 K07126; uncharacterized protein D HP_1098 conserved hypothetical secreted protein K07126 K07126; uncharacterized protein D HP_1117 conserved hypothetical secreted protein K07126 K07126; uncharacterized protein D HP_1321 conserved hypothetical ATP-binding protein K07133 K07133; uncharacterized protein D HP_0958 predicted coding region HP0958 K07164 K07164; uncharacterized protein D HP_0861 predicted coding region HP0861 K09792 K09792; uncharacterized protein D HP_1242 conserved hypothetical protein K09794 K09794; uncharacterized protein D HP_1236 predicted coding region HP1236 K09804 K09804; uncharacterized protein D HP_0852 predicted coding region HP0852 K09805 K09805; uncharacterized protein D HP_0018 predicted coding region HP0018 K09859 K09859; uncharacterized protein D HP_1502 predicted coding region HP1502 K09943 K09943; uncharacterized protein D HP_0282 predicted coding region HP0282 K09944 K09944; uncharacterized protein D HP_0292 predicted coding region HP0292 K01163 K01163; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: June 3, 2024