+D GENES KO
#
KEGG Orthology (KO) - Alcaligenes faecalis JQ135
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:afq00010]
D AFA_16950 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AFA_12680 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AFA_03425 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AFA_13450 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AFA_03390 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AFA_03395 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AFA_16435 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AFA_04150 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AFA_12895 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AFA_02640 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AFA_10135 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AFA_10285 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AFA_10280 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_17610 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AFA_04765 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AFA_04760 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AFA_12960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_04225 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_15955 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D AFA_02745 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00020 Citrate cycle (TCA cycle) [PATH:afq00020]
D AFA_04875 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AFA_17375 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AFA_06510 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AFA_04800 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AFA_13610 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AFA_04895 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AFA_04900 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10990 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AFA_10995 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AFA_14710 propionyl-CoA--succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D AFA_04860 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AFA_04865 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AFA_04850 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AFA_04855 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AFA_03870 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AFA_09455 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AFA_04840 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AFA_10285 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AFA_10280 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:afq00030]
D AFA_16950 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AFA_01375 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AFA_03385 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D AFA_04125 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D AFA_05340 ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D AFA_08660 hypothetical protein K00852 rbsK; ribokinase [EC:2.7.1.15]
D AFA_02745 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AFA_02810 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AFA_02650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AFA_03425 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AFA_12680 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:afq00040]
D AFA_01205 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AFA_01375 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D AFA_17820 aldehyde dehydrogenase family protein K22187 xylA; alpha-ketoglutaric semialdehyde dehydrogenase [EC:1.2.1.-]
D AFA_02515 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D AFA_16875 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:afq00051]
D AFA_02745 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AFA_02515 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D AFA_16875 aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D AFA_02330 mandelate racemase K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90]
D AFA_12680 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AFA_03425 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AFA_13450 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AFA_08685 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:afq00052]
D AFA_16515 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AFA_03305 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AFA_01205 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AFA_02745 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:afq00500]
D AFA_01205 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AFA_02745 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AFA_16950 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:afq00520]
D AFA_11820 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AFA_04425 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6]
D AFA_17495 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AFA_04185 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AFA_07945 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D AFA_17515 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AFA_15510 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D AFA_12020 gph; phosphoglycolate phosphatase K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D AFA_03805 aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D AFA_03800 mannose-1-phosphate guanylyltransferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D AFA_17140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AFA_13810 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AFA_17015 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AFA_17010 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D AFA_02720 LPS biosynthesis protein WbpP K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D AFA_02715 Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D AFA_02745 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AFA_01205 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AFA_16515 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AFA_03305 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AFA_08685 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AFA_16950 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AFA_11685 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D AFA_17810 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:afq00620]
D AFA_12960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_04225 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_10285 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AFA_10280 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_06560 hypothetical protein K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D AFA_13955 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D AFA_04765 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AFA_17610 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AFA_14785 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AFA_14790 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AFA_10725 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AFA_02640 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AFA_04565 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AFA_15660 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AFA_15655 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AFA_13190 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AFA_01015 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AFA_04760 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D AFA_14710 propionyl-CoA--succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D AFA_15955 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D AFA_04675 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D AFA_02215 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D AFA_02210 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12]
D AFA_12575 2-hydroxy-acid oxidase K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D AFA_18590 glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AFA_03830 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AFA_03340 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D AFA_15215 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D AFA_12700 hypothetical protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D AFA_03980 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AFA_04890 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AFA_03365 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D AFA_04840 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AFA_03870 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D AFA_09455 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D AFA_02075 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AFA_10135 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AFA_00580 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_08235 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D AFA_00750 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:afq00630]
D AFA_11795 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D AFA_12960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_04225 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_00580 malate synthase G K01638 aceB; malate synthase [EC:2.3.3.9]
D AFA_04840 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AFA_04875 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D AFA_17375 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AFA_06510 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D AFA_04800 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_04995 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AFA_14020 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AFA_05495 glycolate oxidase subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D AFA_05500 glycolate oxidase subunit GlcE K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D AFA_05505 glycolate oxidase iron-sulfur subunit K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D AFA_18595 catalase K03781 katE; catalase [EC:1.11.1.6]
D AFA_12060 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
D AFA_12700 hypothetical protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D AFA_09440 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D AFA_01365 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AFA_13175 HAD family hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D AFA_14070 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_14085 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_15490 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_02590 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D AFA_02665 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D AFA_02660 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D AFA_02655 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D AFA_02650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AFA_12695 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D AFA_03030 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D AFA_03040 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AFA_16830 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AFA_16835 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AFA_03045 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AFA_16840 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AFA_03050 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D AFA_16845 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D AFA_17345 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D AFA_09250 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D AFA_03480 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AFA_09210 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D AFA_17390 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:afq00640]
D AFA_12960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_04225 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_15955 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D AFA_14785 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AFA_14790 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AFA_10725 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_15295 alcohol dehydrogenase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AFA_04565 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AFA_15660 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AFA_15655 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AFA_13190 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AFA_14195 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D AFA_10995 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AFA_10990 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AFA_12985 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AFA_11070 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AFA_04815 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D AFA_06520 PrpF family protein K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D AFA_04800 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D AFA_04820 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D AFA_07735 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:afq00650]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_01510 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AFA_01790 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AFA_17085 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_00145 enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_06560 hypothetical protein K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D AFA_13955 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D AFA_04990 class I poly(R)-hydroxyalkanoic acid synthase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D AFA_14050 poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D AFA_13225 polyhydroxyalkanoate depolymerase K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D AFA_04995 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AFA_14020 beta-ketoacyl-ACP reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D AFA_12695 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D AFA_16520 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D AFA_04860 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AFA_04865 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AFA_04850 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AFA_04855 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AFA_18145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AFA_13865 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AFA_14710 propionyl-CoA--succinate CoA transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D AFA_00780 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AFA_01130 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AFA_12940 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D AFA_12935 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D AFA_13515 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D AFA_00205 alcohol dehydrogenase K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D AFA_00615 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AFA_13500 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AFA_13495 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:afq00660]
D AFA_00615 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AFA_13500 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AFA_13495 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AFA_10995 succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D AFA_10990 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D AFA_05530 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D AFA_00775 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AFA_10820 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AFA_00770 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AFA_10815 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AFA_10810 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:afq00562]
D AFA_14215 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_15345 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_18110 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_03745 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AFA_04525 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AFA_12985 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AFA_11070 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AFA_13450 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:afq00190]
D AFA_13430 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D AFA_13425 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D AFA_13420 NADH-quinone oxidoreductase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D AFA_13415 NADH-quinone oxidoreductase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D AFA_13410 NADH-quinone oxidoreductase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D AFA_13405 NADH-quinone oxidoreductase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D AFA_13400 NADH-quinone oxidoreductase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D AFA_13395 NADH-quinone oxidoreductase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D AFA_13390 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D AFA_13385 NADH:ubiquinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D AFA_13380 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D AFA_13375 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D AFA_13370 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D AFA_13365 NADH-quinone oxidoreductase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D AFA_10125 FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D AFA_04860 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D AFA_04865 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D AFA_04850 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D AFA_04855 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D AFA_17220 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AFA_17225 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AFA_17230 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AFA_17570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AFA_17545 cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D AFA_17535 ctaD; cytochrome c oxidase subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D AFA_17530 coxB; cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D AFA_17565 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D AFA_14175 hypothetical protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AFA_02610 hypothetical protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AFA_11775 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AFA_06385 hypothetical protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AFA_14170 cytochrome-c oxidase K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AFA_02615 cytochrome-c oxidase K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AFA_11770 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AFA_06390 cytochrome-c oxidase K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AFA_11765 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D AFA_11760 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D AFA_03580 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AFA_16325 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AFA_03585 cytochrome oxidase K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AFA_16320 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AFA_16315 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AFA_10670 hypothetical protein K08738 CYC; cytochrome c
D AFA_09475 cytochrome C K08738 CYC; cytochrome c
D AFA_16620 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AFA_16610 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AFA_16615 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AFA_16625 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AFA_16605 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AFA_16640 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AFA_16630 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AFA_16635 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AFA_10960 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D AFA_04200 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:afq00680]
D AFA_17610 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AFA_17605 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D AFA_03040 formate dehydrogenase subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AFA_16830 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AFA_16835 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D AFA_03045 formate dehydrogenase K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AFA_16840 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D AFA_03050 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D AFA_16845 formate dehydrogenase subunit gamma K00127 fdoI; formate dehydrogenase subunit gamma
D AFA_03030 formate dehydrogenase K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D AFA_14070 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_14085 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_15490 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_09440 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D AFA_02650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AFA_12895 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AFA_02075 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D AFA_04840 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AFA_03425 fructose-bisphosphate aldolase class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D AFA_12680 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AFA_14785 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D AFA_14790 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AFA_10725 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AFA_12960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_04225 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_10135 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D AFA_16435 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AFA_04150 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AFA_02985 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AFA_14075 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AFA_12000 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AFA_13350 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:afq00910]
D AFA_09210 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
D AFA_15935 nirK; nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D AFA_11285 cytochrome C K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1]
D AFA_15965 nitric oxide reductase large subunit K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D AFA_16920 nitrous-oxide reductase K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D AFA_13355 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D AFA_01780 nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D AFA_11105 2-nitropropane dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D AFA_16785 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_00285 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_01065 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AFA_11710 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AFA_01770 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AFA_01765 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AFA_02870 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:afq00920]
D AFA_17255 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AFA_11195 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D AFA_17250 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AFA_11190 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AFA_17245 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AFA_11185 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AFA_11180 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AFA_04110 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AFA_16545 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AFA_16540 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AFA_04120 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AFA_16535 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AFA_04115 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AFA_00535 ssuD; alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D AFA_00540 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D AFA_14755 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AFA_14750 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AFA_12440 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D AFA_01870 phosphorylase K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D AFA_14745 phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D AFA_07545 sulfite oxidase K00387 SUOX; sulfite oxidase [EC:1.8.3.1]
D AFA_06245 sulfur oxidation protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY
D AFA_06240 soxZ; thiosulfate oxidation carrier complex protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ
D AFA_03945 oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D AFA_18190 assimilatory sulfite reductase (NADPH) flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D AFA_18195 assimilatory sulfite reductase (NADPH) hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D AFA_05125 pyridine nucleotide-disulfide oxidoreductase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D AFA_06230 cytochrome C K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D AFA_06235 hypothetical protein K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D AFA_09185 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D AFA_09195 tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D AFA_09190 tetrathionate reductase K08359 ttrC; tetrathionate reductase subunit C
D AFA_05175 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AFA_14530 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AFA_13045 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AFA_01830 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AFA_15450 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D AFA_15385 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D AFA_11050 long-chain fatty acid--CoA ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D AFA_10745 acyl-CoA synthetase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D AFA_11915 acyl-CoA dehydrogenase K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D AFA_11055 enoyl-CoA hydratase K20036 dmdD; (methylthio)acryloyl-CoA hydratase [EC:4.2.1.155]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:afq00061]
D AFA_04565 acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D AFA_15660 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D AFA_15655 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D AFA_13190 acetyl-CoA carboxylase, carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D AFA_13115 acyl carrier protein K02078 acpP; acyl carrier protein
D AFA_13125 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AFA_04470 MdcH K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AFA_13130 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AFA_01585 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AFA_13110 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AFA_00325 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_05295 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_06550 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_13120 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_17420 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_10360 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_03415 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_09120 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_10170 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AFA_15225 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AFA_08070 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D AFA_03740 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_01085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_18185 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:afq00071]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_17080 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_17085 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AFA_08190 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D AFA_02125 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D AFA_18155 acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-]
D AFA_03465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AFA_03740 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_01085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_18185 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_15115 picB2; 6-Hydroxy-picolinic acid monooxygenase subunit II K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D AFA_13935 hypothetical protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D AFA_17610 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AFA_04765 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:afq00100]
D AFA_01575 desaturase K00227 SC5DL; Delta7-sterol 5-desaturase [EC:1.14.19.20]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:afq00561]
D AFA_02650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AFA_05715 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AFA_13135 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AFA_10610 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AFA_03840 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AFA_15715 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AFA_14835 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:afq00564]
D AFA_16455 glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D AFA_05720 FAD-dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D AFA_10610 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AFA_03840 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AFA_15715 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AFA_14835 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D AFA_14215 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_15345 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_18110 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_10525 glycerophosphodiester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D AFA_10200 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D AFA_13485 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AFA_18450 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D AFA_14865 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D AFA_06465 phosphoserine phosphatase K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D AFA_17615 cardiolipin synthase B K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AFA_04320 cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D AFA_15060 hypothetical protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D AFA_11810 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D AFA_14215 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_15345 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_18110 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:afq00592]
D AFA_17080 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:afq01040]
D AFA_07535 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D AFA_03730 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:afq00230]
D AFA_02745 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AFA_02810 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D AFA_10255 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AFA_12715 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D AFA_07525 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AFA_09525 phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D AFA_07830 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D AFA_03915 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D AFA_03440 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D AFA_03435 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D AFA_03430 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D AFA_12545 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AFA_14445 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AFA_16300 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AFA_00225 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AFA_10605 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AFA_04985 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AFA_07835 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AFA_11600 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AFA_09295 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D AFA_11475 xdhA; xanthine dehydrogenase small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D AFA_11480 xdhB; xanthine dehydrogenase molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D AFA_14100 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AFA_07845 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AFA_10755 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AFA_02530 tRNA-specific adenosine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D AFA_11490 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D AFA_10490 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D AFA_03605 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AFA_03610 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AFA_01335 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AFA_17890 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D AFA_10500 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AFA_04195 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D AFA_13205 GTP pyrophosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D AFA_11530 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AFA_15640 carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D AFA_00590 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D AFA_04705 adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D AFA_07355 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AFA_02285 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D AFA_07260 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D AFA_01870 phosphorylase K00988 APA1_2; sulfate adenylyltransferase (ADP) / ATP adenylyltransferase [EC:2.7.7.5 2.7.7.53]
D AFA_15710 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D AFA_14755 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AFA_14750 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AFA_12440 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D AFA_11650 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D AFA_02700 uraD; OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D AFA_01635 allantoinase K01466 allB; allantoinase [EC:3.5.2.5]
D AFA_11640 allantoinase K16842 hpxB; allantoinase [EC:3.5.2.5]
D AFA_02535 (S)-ureidoglycine aminohydrolase K14977 ylbA; (S)-ureidoglycine aminohydrolase [EC:3.5.3.26]
D AFA_02695 ureidoglycolate lyase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D AFA_02880 ureidoglycolate hydrolase K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
C 00240 Pyrimidine metabolism [PATH:afq00240]
D AFA_04135 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AFA_04130 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AFA_11075 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AFA_14475 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AFA_08030 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D AFA_14355 dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D AFA_15905 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D AFA_14840 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D AFA_10215 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D AFA_11600 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AFA_12740 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D AFA_12925 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D AFA_11980 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D AFA_00225 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AFA_10605 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AFA_03265 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D AFA_01335 ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D AFA_02575 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D AFA_03605 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AFA_03610 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D AFA_07500 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AFA_02600 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AFA_08905 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D AFA_01630 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D AFA_09130 NADP-dependent 3-hydroxy acid dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:afq00250]
D AFA_00190 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AFA_08400 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AFA_01040 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AFA_12080 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AFA_14325 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AFA_09145 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D AFA_07255 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AFA_10565 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AFA_11530 adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D AFA_12545 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D AFA_11075 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D AFA_18145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AFA_13865 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AFA_01770 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AFA_01765 gltD; glutamate synthase K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D AFA_01065 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AFA_11710 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AFA_07440 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AFA_13870 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AFA_04135 carB; carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D AFA_04130 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D AFA_17495 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AFA_10255 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:afq00260]
D AFA_04575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AFA_10805 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AFA_05255 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AFA_10880 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D AFA_05260 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D AFA_14070 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_14085 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_15490 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_09440 glycerate dehydrogenase K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29]
D AFA_12700 hypothetical protein K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D AFA_02650 glycerate kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D AFA_16435 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AFA_04150 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AFA_02985 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AFA_14075 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AFA_12000 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AFA_13350 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D AFA_09130 NADP-dependent 3-hydroxy acid dehydrogenase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_02590 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
D AFA_13485 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D AFA_18520 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AFA_16260 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AFA_18460 serine dehydratase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D AFA_13195 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AFA_13200 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AFA_12635 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D AFA_12640 ectA; diaminobutyrate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D AFA_12630 ectC; L-ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
D AFA_12625 thpD; ectoine hydroxylase K10674 ectD; ectoine hydroxylase [EC:1.14.11.55]
C 00270 Cysteine and methionine metabolism [PATH:afq00270]
D AFA_13045 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D AFA_00705 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AFA_07230 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AFA_16145 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AFA_07970 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AFA_07985 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AFA_11005 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AFA_02020 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AFA_12460 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AFA_16190 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D AFA_04985 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D AFA_08610 S-adenosylhomocysteine deaminase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D AFA_01640 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D AFA_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_07700 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_06305 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AFA_02025 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AFA_04575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AFA_10805 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AFA_05255 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AFA_01830 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D AFA_14930 O-acetylhomoserine aminocarboxypropyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AFA_11295 hypothetical protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D AFA_15450 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D AFA_01595 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AFA_01815 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AFA_08680 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AFA_00190 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AFA_05175 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AFA_14530 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AFA_04840 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D AFA_18460 serine dehydratase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D AFA_11940 cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D AFA_02985 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AFA_14075 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AFA_12000 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:afq00280]
D AFA_01595 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_08190 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D AFA_02125 acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D AFA_00690 acyl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AFA_17080 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AFA_10095 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D AFA_14595 oxidoreductase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D AFA_12985 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AFA_11070 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AFA_14195 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D AFA_00670 3-methylcrotonyl-CoA carboxylase K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D AFA_00675 methylcrotonoyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D AFA_15305 enoyl-CoA hydratase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D AFA_00780 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AFA_01130 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AFA_12940 succinyl-CoA--3-ketoacid-CoA transferase K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D AFA_12935 succinyl-CoA--3-ketoacid-CoA transferase K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:afq00290]
D AFA_18520 serine/threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AFA_16260 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D AFA_18460 serine dehydratase K17989 SDS; L-serine/L-threonine ammonia-lyase [EC:4.3.1.17 4.3.1.19]
D AFA_00775 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AFA_10820 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D AFA_00770 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AFA_10815 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D AFA_10810 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D AFA_00615 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AFA_13500 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AFA_13495 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AFA_13490 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AFA_00085 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AFA_17325 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AFA_02080 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AFA_01595 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AFA_12080 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AFA_08235 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D AFA_00750 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:afq00300]
D AFA_05255 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D AFA_04575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AFA_10805 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AFA_03995 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AFA_04345 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AFA_01685 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AFA_13800 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D AFA_07580 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D AFA_00460 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AFA_07575 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AFA_02005 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AFA_17915 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AFA_14700 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D AFA_17650 2-aminoadipate aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D AFA_03650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
C 00310 Lysine degradation [PATH:afq00310]
D AFA_14765 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D AFA_04900 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_03465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AFA_13865 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AFA_14775 DUF1338 domain-containing protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93]
D AFA_01785 CoA transferase K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D AFA_01230 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AFA_14940 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
D AFA_14770 FAD-dependent oxidoreductase K26065 amaA; L-pipecolate oxidase
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:afq00220]
D AFA_07325 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D AFA_07255 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AFA_10565 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AFA_01065 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AFA_11710 glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D AFA_00190 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AFA_12080 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AFA_05360 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D AFA_15760 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D AFA_16410 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D AFA_15535 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D AFA_00460 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AFA_18515 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:afq00330]
D AFA_02580 lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D AFA_10470 lysine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D AFA_12460 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AFA_05270 GCN5 family N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D AFA_10145 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AFA_10580 FAD-dependent oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D AFA_03990 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D AFA_09395 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D AFA_07440 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AFA_13870 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AFA_15790 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AFA_12860 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D AFA_02445 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AFA_00190 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AFA_01230 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AFA_14940 ornithine cyclodeaminase K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:afq00340]
D AFA_17145 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D AFA_11535 ATP phosphoribosyltransferase regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D AFA_17180 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D AFA_17175 hisI; phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D AFA_08040 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D AFA_17165 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D AFA_17160 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D AFA_17170 imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D AFA_17155 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D AFA_11560 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AFA_17150 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D AFA_17680 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D AFA_17685 urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D AFA_17660 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D AFA_17665 formimidoylglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D AFA_17390 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:afq00350]
D AFA_00190 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AFA_11560 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AFA_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_07700 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_14315 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AFA_02765 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D AFA_02760 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D AFA_01720 amine dehydrogenase K13371 aauA; aralkylamine dehydrogenase light chain [EC:1.4.9.2]
D AFA_01705 amine dehydrogenase K13372 aauB; aralkylamine dehydrogenase heavy chain [EC:1.4.9.2]
D AFA_01695 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D AFA_17610 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AFA_04765 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AFA_05510 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D AFA_16530 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D AFA_18145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AFA_13865 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AFA_00275 NADPH dehydrogenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4]
D AFA_10955 5-carboxymethyl-2-hydroxymuconate isomerase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:afq00360]
D AFA_01720 amine dehydrogenase K13371 aauA; aralkylamine dehydrogenase light chain [EC:1.4.9.2]
D AFA_01705 amine dehydrogenase K13372 aauB; aralkylamine dehydrogenase heavy chain [EC:1.4.9.2]
D AFA_01695 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D AFA_11830 paaF; phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D AFA_11835 paaD; phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D AFA_11870 1,2-phenylacetyl-CoA epoxidase subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D AFA_11865 1,2-phenylacetyl-CoA epoxidase subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D AFA_11860 paaI; phenylacetate-CoA oxygenase subunit PaaI K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D AFA_11855 paaJ; phenylacetate-CoA oxygenase subunit PaaJ K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D AFA_11850 phenylacetic acid degradation protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D AFA_11840 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_01510 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AFA_01790 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AFA_00190 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AFA_11560 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AFA_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_07700 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_14315 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AFA_08395 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AFA_11680 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AFA_00995 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AFA_15795 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AFA_01230 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AFA_10145 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AFA_13915 3-phenylpropionate dioxygenase K05708 hcaE; 3-phenylpropionate/trans-cinnamate dioxygenase subunit alpha [EC:1.14.12.19]
D AFA_13920 3-phenylpropionate dioxygenase K05709 hcaF; 3-phenylpropionate/trans-cinnamate dioxygenase subunit beta [EC:1.14.12.19]
D AFA_13925 bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D AFA_15110 picB1; 6-Hydroxy-picolinic acid monooxygenase subunit I K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D AFA_15115 picB2; 6-Hydroxy-picolinic acid monooxygenase subunit II K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D AFA_13935 hypothetical protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D AFA_13930 3-(cis-5,6-dihydroxycyclohexa-1,3-dien-1-yl)propanoate dehydrogenase K05711 hcaB; 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase [EC:1.3.1.87]
D AFA_02775 FAD-dependent oxidoreductase K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D AFA_13940 mhpB; 3-(2,3-dihydroxyphenyl)propionate dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16]
D AFA_13945 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14]
D AFA_01615 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D AFA_13950 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D AFA_13960 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D AFA_13955 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:afq00380]
D AFA_17340 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D AFA_17345 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D AFA_09250 hypothetical protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D AFA_06600 aminotransferase K01556 KYNU; kynureninase [EC:3.7.1.3]
D AFA_02245 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D AFA_04900 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_03465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AFA_16785 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_00285 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_10145 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AFA_14815 indole acetimide hydrolase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-]
D AFA_18595 catalase K03781 katE; catalase [EC:1.11.1.6]
D AFA_12060 catalase HPII K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:afq00400]
D AFA_12580 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AFA_17895 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D AFA_10355 dehydroquinase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AFA_15665 aroQ; type II 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D AFA_15695 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D AFA_17900 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D AFA_11985 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D AFA_10850 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D AFA_01360 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AFA_01355 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AFA_01350 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D AFA_10780 N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D AFA_01345 trpC; indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D AFA_13195 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D AFA_13200 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D AFA_11995 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D AFA_11990 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AFA_00190 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AFA_11560 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AFA_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_07700 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:afq00410]
D AFA_00405 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AFA_16105 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AFA_08905 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D AFA_01630 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D AFA_14195 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AFA_12985 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D AFA_11070 mmsA; methylmalonate-semialdehyde dehydrogenase (CoA acylating) K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:afq00430]
D AFA_03475 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_17830 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_04435 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_10690 FAD-dependent oxidoreductase K07256 tauY; taurine dehydrogenase large subunit [EC:1.4.2.-]
D AFA_10705 xsc; sulfoacetaldehyde acetyltransferase K03852 xsc; sulfoacetaldehyde acetyltransferase [EC:2.3.3.15]
D AFA_14790 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AFA_10725 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D AFA_14785 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:afq00440]
D AFA_00195 phosphonopyruvate hydrolase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D AFA_15355 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
D AFA_11380 phosphonoacetaldehyde hydrolase K05306 phnX; phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
C 00450 Selenocompound metabolism [PATH:afq00450]
D AFA_00705 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AFA_07230 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D AFA_16145 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AFA_07970 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AFA_07985 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AFA_11005 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D AFA_08790 cysteine desulfurase CsdA K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D AFA_13560 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D AFA_14755 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AFA_14750 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AFA_12440 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D AFA_16905 selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AFA_16855 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D AFA_02550 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:afq00460]
D AFA_16785 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_00285 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_03475 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_17830 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_04435 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_01040 L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D AFA_14070 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_14085 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_15490 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_09210 formamidase K01455 E3.5.1.49; formamidase [EC:3.5.1.49]
C 00470 D-Amino acid metabolism [PATH:afq00470]
D AFA_05290 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AFA_01230 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AFA_03680 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AFA_14200 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AFA_03660 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AFA_02005 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D AFA_17915 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D AFA_08995 FAD-dependent oxidoreductase K19746 dauA; D-arginine dehydrogenase [EC:1.4.99.6]
D AFA_08395 D-amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AFA_11680 amino acid dehydrogenase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AFA_00995 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D AFA_15795 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:afq00480]
D AFA_03475 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_17830 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_04435 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_03500 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D AFA_11465 lactam utilization protein LamB K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D AFA_01815 glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D AFA_08680 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D AFA_13030 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AFA_12675 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AFA_15245 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_08100 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_08125 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_00220 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_12120 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_12550 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_16880 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_09430 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_13610 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D AFA_03120 peroxiredoxin K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D AFA_12460 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:afq00540]
D AFA_10165 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AFA_03700 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AFA_10175 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AFA_04540 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AFA_10160 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AFA_07370 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AFA_16335 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AFA_12920 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AFA_16340 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AFA_07360 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AFA_01195 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AFA_02010 acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AFA_02015 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AFA_04140 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D AFA_05310 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D AFA_16395 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AFA_11955 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D AFA_03845 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AFA_16205 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D AFA_11950 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AFA_01190 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AFA_05415 heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AFA_16580 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:afq00541]
D AFA_01205 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D AFA_16515 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AFA_03305 NAD(P)-dependent oxidoreductase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D AFA_16590 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AFA_16585 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AFA_16595 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AFA_16600 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D AFA_11685 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D AFA_17810 CDP-6-deoxy-delta-3,4-glucoseen reductase K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D AFA_17515 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D AFA_17015 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AFA_17010 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D AFA_02715 Vi polysaccharide biosynthesis protein VipA/TviB K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D AFA_02720 LPS biosynthesis protein WbpP K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:afq00550]
D AFA_17140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AFA_13810 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AFA_03675 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AFA_03660 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AFA_03680 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AFA_03650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
D AFA_10205 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AFA_04535 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AFA_03655 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AFA_03670 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AFA_15700 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AFA_17905 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AFA_11090 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D AFA_15870 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AFA_03645 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AFA_01225 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AFA_03260 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:afq00552]
D AFA_04535 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:afq00543]
D AFA_08835 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
D AFA_08830 pgaD; poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD K11937 pgaD; biofilm PGA synthesis protein PgaD
D AFA_13045 serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:afq00730]
D AFA_15815 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D AFA_08045 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AFA_16185 thiD; bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AFA_15735 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D AFA_07720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AFA_05190 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AFA_16180 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D AFA_10700 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D AFA_15740 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D AFA_14870 thiL; thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D AFA_11885 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AFA_07355 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:afq00740]
D AFA_12500 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AFA_14885 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AFA_15480 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AFA_16480 riboflavin synthase subunit beta K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AFA_14880 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D AFA_09135 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D AFA_07520 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D AFA_00540 msuE; FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38]
D AFA_16670 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:afq00750]
D AFA_03495 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D AFA_14105 pdxK; bifunctional pyridoxal kinase/hydroxymethylpyrimidine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D AFA_09450 gapA; aldehyde dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72]
D AFA_14075 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AFA_12000 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AFA_05230 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D AFA_10405 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D AFA_05260 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:afq00760]
D AFA_08400 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D AFA_08405 quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D AFA_06100 nicotinate-nucleotide diphosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D AFA_13215 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D AFA_00225 5'-nucleotidase K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D AFA_10605 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D AFA_12725 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D AFA_09270 NADH pyrophosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D AFA_02115 NAD(+) synthase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D AFA_06505 ompetence-damaged protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D AFA_14860 damage-inducible protein CinA K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D AFA_13780 NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D AFA_04640 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AFA_04645 NAD(P)(+) transhydrogenase K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D AFA_04650 NAD synthetase K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D AFA_14980 nicA; Nicotinate dehydrogenase subunit A K18029 nicA; nicotinate dehydrogenase subunit A [EC:1.17.2.1]
D AFA_14975 nicB2; Nicotinate dehydrogenase subunit B2 K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D AFA_14985 nicB2; Nicotinate dehydrogenase subunit B1 K18030 nicB; nicotinate dehydrogenase subunit B [EC:1.17.2.1]
D AFA_08350 6-hydroxynicotinate 3-monooxygenase K14974 nicC; 6-hydroxynicotinate 3-monooxygenase [EC:1.14.13.114]
D AFA_18565 hpaX; 2,5-Dihydroxypyridine 5,6-dioxygenase K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D AFA_14965 nicX; 2,5-Dihydroxypyridine 5,6-dioxygenase K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D AFA_15135 picD; 2,5-Dihydroxypyridine 5,6-dioxygenase K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D AFA_13575 peptidase M29 K18028 nicX; 2,5-dihydroxypyridine 5,6-dioxygenase [EC:1.13.11.9]
D AFA_18560 hpaD; N-formylmaleamate deformylase K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106]
D AFA_14970 nicD; N-formylmaleamate deformylase K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106]
D AFA_15140 picE; N-formylmaleamate deformylase K15357 nicD; N-formylmaleamate deformylase [EC:3.5.1.106]
D AFA_18570 hpaF; Maleamate amidohydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D AFA_00805 isochorismatase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D AFA_14960 nicF; Maleamate amidohydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D AFA_15130 picF; Maleamate amidohydrolase K13995 nicF; maleamate amidohydrolase [EC:3.5.1.107]
D AFA_16520 Asp/Glu racemase K01799 nicE; maleate isomerase [EC:5.2.1.1]
D AFA_18145 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D AFA_13865 gabD; succinate-semialdehyde dehydrogenase (NADP(+)) K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:afq00770]
D AFA_00615 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AFA_13500 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D AFA_13495 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D AFA_13490 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AFA_00085 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D AFA_17325 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AFA_02080 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D AFA_17360 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D AFA_16105 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D AFA_01210 type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D AFA_07505 phosphopantothenate synthase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D AFA_14910 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D AFA_16090 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D AFA_11825 holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D AFA_01455 ACP synthase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D AFA_01595 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AFA_08905 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D AFA_01630 Zn-dependent hydrolase K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D AFA_00405 aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:afq00780]
D AFA_16475 SAM-dependent methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D AFA_13110 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AFA_00325 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_05295 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_06550 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_13120 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_17420 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_10360 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_03415 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_09120 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_10170 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AFA_15225 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AFA_04375 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AFA_17045 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AFA_04370 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AFA_04365 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D AFA_03135 bioB; biotin synthase BioB K01012 bioB; biotin synthase [EC:2.8.1.6]
D AFA_01215 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:afq00785]
D AFA_01240 octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D AFA_01250 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10285 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D AFA_10280 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D AFA_04895 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D AFA_04900 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D AFA_02590 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:afq00790]
D AFA_05195 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D AFA_08015 GTP cyclohydrolase I FolE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D AFA_16660 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D AFA_03895 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D AFA_04180 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D AFA_07950 folP; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D AFA_02595 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AFA_10270 bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D AFA_12500 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AFA_14885 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D AFA_03515 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D AFA_03510 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D AFA_14065 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AFA_11800 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AFA_03060 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AFA_03090 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AFA_03080 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AFA_03420 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AFA_03075 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AFA_03070 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D AFA_14950 hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D AFA_03065 mobA; molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:afq00670]
D AFA_02595 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D AFA_10300 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D AFA_14070 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_14085 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_15490 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D AFA_07525 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D AFA_14445 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AFA_01145 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AFA_16145 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D AFA_02600 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D AFA_03480 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D AFA_02035 metF; methylenetetrahydrofolate reductase [NAD(P)H] K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D AFA_02040 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:afq00860]
D AFA_15595 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AFA_16690 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D AFA_15745 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AFA_17945 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AFA_10980 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D AFA_10975 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D AFA_01740 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D AFA_12720 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D AFA_11110 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D AFA_12865 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D AFA_13770 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D AFA_18200 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D AFA_11275 siroheme synthase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4]
D AFA_11235 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D AFA_11255 AsnC family protein K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D AFA_11260 protein nirH K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D AFA_11250 transcriptional regulator K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111]
D AFA_17570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AFA_17565 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D AFA_10710 cobaltochelatase subunit CobS K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2]
D AFA_10715 hypothetical protein K09883 cobT; cobaltochelatase CobT [EC:6.6.1.2]
D AFA_01935 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AFA_16275 pyridoxamine 5'-phosphate oxidase K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D AFA_07395 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D AFA_00820 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
D AFA_17860 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:afq00130]
D AFA_00265 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D AFA_10540 chorismate--pyruvate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D AFA_17645 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AFA_03345 3-octaprenyl-4-hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D AFA_16670 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AFA_01390 ubiquinone biosynthesis protein UbiH K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D AFA_12015 bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D AFA_14430 monooxygenase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D AFA_16230 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D AFA_02635 demethoxyubiquinone hydroxylase family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D AFA_01425 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D AFA_04685 wrbA; NAD(P)H:quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D AFA_14315 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:afq00900]
D AFA_05190 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D AFA_10195 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D AFA_13335 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D AFA_02800 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D AFA_13330 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D AFA_11585 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D AFA_12780 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_16670 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AFA_05185 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AFA_16045 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AFA_10205 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AFA_11880 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:afq00906]
D AFA_05280 hpnD; squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:afq00903]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D AFA_12560 acetylesterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:afq00907]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AFA_00780 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AFA_01130 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D AFA_17080 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D AFA_03385 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:afq00523]
D AFA_16590 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AFA_16585 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AFA_16595 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AFA_16600 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:afq01053]
D AFA_01425 isochorismate synthase K02361 entC; isochorismate synthase [EC:5.4.4.2]
D AFA_01420 2,3-dihydro-2,3-dihydroxybenzoate synthetase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D AFA_01415 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28]
D AFA_01450 (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D AFA_01440 non-ribosomal peptide synthetase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
C 01055 Biosynthesis of vancomycin group antibiotics [PATH:afq01055]
D AFA_02405 alpha-hydroxy-acid oxidizing enzyme K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D AFA_16585 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids [PATH:afq00996]
D AFA_15960 p-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61]
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:afq00311]
D AFA_10575 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D AFA_15015 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D AFA_17400 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AFA_11715 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:afq00332]
D AFA_15790 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D AFA_12860 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:afq00261]
D AFA_02405 alpha-hydroxy-acid oxidizing enzyme K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
D AFA_14755 sulfate adenylyltransferase K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D AFA_14750 sulfate adenylyltransferase small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D AFA_12440 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D AFA_04575 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D AFA_10805 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D AFA_03995 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AFA_04345 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AFA_01685 dihydrodipicolinate synthase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D AFA_13800 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:afq00521]
D AFA_02745 phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D AFA_03745 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AFA_04525 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D AFA_16590 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AFA_16585 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D AFA_16595 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D AFA_16600 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:afq00525]
D AFA_16590 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D AFA_16585 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:afq00401]
D AFA_11990 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D AFA_00190 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AFA_11560 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AFA_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_07700 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D AFA_01360 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AFA_01355 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D AFA_13125 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AFA_04470 MdcH K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AFA_00325 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_05295 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_06550 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_13120 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_17420 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_10360 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_03415 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_09120 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_15225 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:afq00998]
D AFA_13115 acyl carrier protein K02078 acpP; acyl carrier protein
D AFA_00195 phosphonopyruvate hydrolase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:afq00999]
D AFA_02020 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D AFA_15695 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:afq00362]
D AFA_08560 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D AFA_06540 aromatic-ring-hydroxylating dioxygenase subunit beta K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D AFA_08565 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D AFA_08570 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D AFA_08575 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D AFA_08250 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D AFA_08245 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D AFA_08270 catC; muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D AFA_08265 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D AFA_10370 hypothetical protein K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D AFA_08255 3-oxoadipate CoA-transferase K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D AFA_08260 3-oxoadipate CoA-transferase K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D AFA_17080 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D AFA_07400 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D AFA_08515 phenol hydroxylase K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0
D AFA_08520 phenol hydroxylase K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243]
D AFA_08525 monooxygenase K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243]
D AFA_08530 phenol 2-monooxygenase K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243]
D AFA_08535 phenol hydroxylase K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243]
D AFA_08540 phenol hydroxylase K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243]
D AFA_15145 picC; 3,6-dihydroxypicolinic acid decarboxylase K14333 DHBD; 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
D AFA_09255 dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AFA_01615 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D AFA_13950 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D AFA_13960 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D AFA_13955 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D AFA_02685 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AFA_05520 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D AFA_05515 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D AFA_05510 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D AFA_05525 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D AFA_05545 PrpF protein K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8]
D AFA_05535 4-oxalomesaconate hydratase K10220 ligJ; 4-oxalmesaconate hydratase [EC:4.2.1.83]
D AFA_05530 ligK; 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D AFA_05580 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D AFA_00265 4-hydroxybenzoyl-CoA thioesterase K01075 E3.1.2.23; 4-hydroxybenzoyl-CoA thioesterase [EC:3.1.2.23]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D AFA_17085 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D AFA_03465 acyl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_01510 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AFA_01790 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:afq00627]
D AFA_10145 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AFA_16785 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_00285 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_01015 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D AFA_16670 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D AFA_15750 2-aminobenzoate-CoA ligase K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D AFA_00270 oxidoreductase K09461 E1.14.13.40; anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
D AFA_15145 picC; 3,6-dihydroxypicolinic acid decarboxylase K14333 DHBD; 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46]
D AFA_15120 picB3; 6-Hydroxy-picolinic acid monooxygenase subunit III K16319 andAc; anthranilate 1,2-dioxygenase large subunit [EC:1.14.12.1]
D AFA_15125 picB4; 6-Hydroxy-picolinic acid monooxygenase subunit VI K16320 andAd; anthranilate 1,2-dioxygenase small subunit [EC:1.14.12.1]
D AFA_02200 oxidoreductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7]
D AFA_05560 salicylaldehyde dehydrogenase K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67]
D AFA_05520 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D AFA_05515 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
D AFA_05510 oxidoreductase K10219 ligC; 2-hydroxy-4-carboxymuconate semialdehyde hemiacetal dehydrogenase [EC:1.1.1.312]
D AFA_05525 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:afq00364]
D AFA_08560 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D AFA_06540 aromatic-ring-hydroxylating dioxygenase subunit beta K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D AFA_08565 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D AFA_08570 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D AFA_08575 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D AFA_08250 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D AFA_11405 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AFA_08245 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:afq00625]
D AFA_04765 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AFA_17610 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D AFA_03410 aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:afq00361]
D AFA_08515 phenol hydroxylase K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0
D AFA_08520 phenol hydroxylase K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243]
D AFA_08525 monooxygenase K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243]
D AFA_08530 phenol 2-monooxygenase K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243]
D AFA_08535 phenol hydroxylase K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243]
D AFA_08540 phenol hydroxylase K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243]
D AFA_08250 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D AFA_11405 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D AFA_08245 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D AFA_09255 dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00623 Toluene degradation [PATH:afq00623]
D AFA_08515 phenol hydroxylase K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0
D AFA_08520 phenol hydroxylase K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243]
D AFA_08525 monooxygenase K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243]
D AFA_08530 phenol 2-monooxygenase K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243]
D AFA_08535 phenol hydroxylase K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243]
D AFA_08540 phenol hydroxylase K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243]
D AFA_05565 4-cresol dehydrogenase K05797 pchF; 4-cresol dehydrogenase (hydroxylating) flavoprotein subunit [EC:1.17.9.1]
D AFA_08250 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D AFA_08245 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D AFA_11405 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:afq00622]
D AFA_08560 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D AFA_06540 aromatic-ring-hydroxylating dioxygenase subunit beta K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D AFA_08565 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D AFA_08570 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D AFA_08575 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D AFA_09255 dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
D AFA_02685 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AFA_01615 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D AFA_13950 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D AFA_13960 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D AFA_13955 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation [PATH:afq00633]
D AFA_15325 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
D AFA_02200 oxidoreductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7]
C 00642 Ethylbenzene degradation [PATH:afq00642]
D AFA_02200 oxidoreductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7]
D AFA_17080 acetyl-CoA acetyltransferase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:afq00643]
D AFA_01695 aldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D AFA_02765 homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D AFA_02760 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D AFA_10145 amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D AFA_16785 nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_00285 aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D AFA_09255 dioxygenase K07104 catE; catechol 2,3-dioxygenase [EC:1.13.11.2]
C 00791 Atrazine degradation
D AFA_06545 isochorismatase K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
C 00930 Caprolactam degradation [PATH:afq00930]
D AFA_12560 acetylesterase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D AFA_16650 enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D AFA_18165 enoyl-CoA hydratase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
D AFA_00545 tRNA modification GTPase K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
C 00621 Dioxin degradation [PATH:afq00621]
D AFA_02685 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D AFA_01615 2-oxopent-4-enoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D AFA_13950 2-keto-4-pentenoate hydratase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80]
D AFA_13960 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D AFA_13955 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:afq00626]
D AFA_02200 oxidoreductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7]
D AFA_04765 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D AFA_17610 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation [PATH:afq00624]
D AFA_02200 oxidoreductase K14581 nahAa; naphthalene 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.7]
D AFA_05520 ligA; protocatechuate 4,5-dioxygenase subunit alpha K04100 ligA; protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
D AFA_05515 protocatechuate 3,4-dioxygenase K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:afq03020]
D AFA_18355 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AFA_18350 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AFA_17980 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AFA_10495 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D AFA_08390 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:afq03010]
D AFA_11975 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AFA_10225 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AFA_18250 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AFA_17985 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AFA_18025 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AFA_05200 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AFA_18310 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AFA_18040 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AFA_15540 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AFA_18295 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AFA_17990 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AFA_18315 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AFA_17995 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AFA_18045 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AFA_13480 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AFA_11625 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AFA_18235 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AFA_05210 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AFA_18260 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AFA_07340 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AFA_11520 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AFA_18370 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AFA_18265 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AFA_18280 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AFA_18275 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AFA_18050 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AFA_18035 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AFA_18360 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AFA_05215 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AFA_18365 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AFA_18375 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AFA_15545 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AFA_18060 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AFA_18015 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AFA_18245 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AFA_17975 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AFA_18030 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AFA_11895 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AFA_08730 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AFA_15775 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AFA_18255 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AFA_18270 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AFA_18055 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AFA_02815 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D AFA_15780 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AFA_12835 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AFA_18240 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AFA_18020 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AFA_12795 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AFA_13140 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AFA_12840 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AFA_18615 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AFA_08725 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AFA_18000 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AFA_01265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:afq00970]
D AFA_03175 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_01275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_03190 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_05455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_14515 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_04670 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_04665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_04020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_04300 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_01800 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_05625 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AFA_05635 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AFA_03165 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AFA_03180 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AFA_13820 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AFA_02805 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AFA_03170 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AFA_03185 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AFA_13815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AFA_18405 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AFA_02455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AFA_13825 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AFA_04330 tRNA-His K14226 tRNA-His; tRNA His
D AFA_01270 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AFA_05450 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AFA_14520 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AFA_02150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_13465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_07660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_11310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_11325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_11345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_13440 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_12525 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AFA_03760 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AFA_05075 tRNA-Met K14230 tRNA-Met; tRNA Met
D AFA_05080 tRNA-Met K14230 tRNA-Met; tRNA Met
D AFA_06120 tRNA-Met K14230 tRNA-Met; tRNA Met
D AFA_07020 tRNA-Met K14230 tRNA-Met; tRNA Met
D AFA_16695 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AFA_04275 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AFA_04270 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AFA_08850 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AFA_08945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AFA_13520 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AFA_04580 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AFA_15475 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AFA_13460 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AFA_17260 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AFA_05600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AFA_18400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AFA_18390 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AFA_18410 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AFA_08420 tRNA-Val K14237 tRNA-Val; tRNA Val
D AFA_11225 tRNA-Val K14237 tRNA-Val; tRNA Val
D AFA_15185 tRNA-Val K14237 tRNA-Val; tRNA Val
D AFA_16865 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D AFA_15595 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AFA_08445 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_13980 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_01155 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_02105 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_15895 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_15900 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AFA_15890 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AFA_03575 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AFA_01905 threonine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AFA_11635 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AFA_17625 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AFA_03855 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AFA_03850 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AFA_08670 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AFA_13540 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AFA_16855 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D AFA_04555 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AFA_02550 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AFA_01145 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D AFA_11605 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AFA_12845 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AFA_07515 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AFA_07745 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AFA_00720 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AFA_14615 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AFA_11580 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AFA_08735 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AFA_08740 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AFA_15500 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AFA_04915 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:afq03060]
D AFA_18010 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AFA_18385 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AFA_13445 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AFA_03240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AFA_03235 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AFA_03245 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AFA_18600 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AFA_03715 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AFA_16450 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AFA_02425 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AFA_04090 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D AFA_14900 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AFA_17190 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AFA_17195 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D AFA_17200 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D AFA_13075 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AFA_07510 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:afq04122]
D AFA_07720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AFA_05175 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AFA_14530 sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D AFA_11630 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AFA_12570 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AFA_03080 molybdenum cofactor biosynthesis protein MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D AFA_03060 moaA; GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D AFA_08175 molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D AFA_03085 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein
D AFA_16420 molybdopterin biosynthesis protein MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D AFA_08165 adenylyltransferase/sulfurtransferase MoeZ K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D AFA_03090 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D AFA_03420 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AFA_03075 moaB; molybdenum cofactor biosynthesis protein B K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75]
D AFA_02440 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D AFA_08170 peptidase K21140 mec; [CysO sulfur-carrier protein]-S-L-cysteine hydrolase [EC:3.13.1.6]
C 03050 Proteasome
C 03018 RNA degradation [PATH:afq03018]
D AFA_14610 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AFA_13185 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D AFA_12895 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AFA_13475 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AFA_14385 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AFA_00840 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AFA_11305 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AFA_03600 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AFA_11705 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AFA_13760 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AFA_14830 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AFA_11555 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D AFA_04200 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AFA_03900 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:afq03030]
D AFA_05900 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_15190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AFA_04095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AFA_10075 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AFA_12855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AFA_13035 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AFA_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AFA_05220 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AFA_11515 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AFA_09845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_12270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_17875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_15205 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AFA_10155 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AFA_05155 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AFA_13290 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:afq03410]
D AFA_13235 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AFA_01260 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AFA_15860 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AFA_04700 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D AFA_02785 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AFA_15630 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AFA_04560 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AFA_13310 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AFA_10480 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AFA_15925 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AFA_05155 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AFA_07785 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AFA_13290 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:afq03420]
D AFA_13340 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AFA_03520 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D AFA_17885 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D AFA_07705 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AFA_11815 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D AFA_07540 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AFA_05155 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AFA_13290 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AFA_08390 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:afq03430]
D AFA_04395 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AFA_03930 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D AFA_07540 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AFA_07385 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AFA_05180 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AFA_07205 DNA polymerase III subunit epsilon K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D AFA_07785 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AFA_09845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_12270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_17875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AFA_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AFA_04095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AFA_12855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AFA_10075 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AFA_05900 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_15190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_13035 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AFA_13290 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:afq03440]
D AFA_07785 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AFA_09845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_12270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_17875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_13060 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AFA_04105 recombination protein RecR K06187 recR; recombination protein RecR
D AFA_05155 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AFA_14455 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AFA_14465 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AFA_14450 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AFA_09355 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AFA_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AFA_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AFA_04095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AFA_12855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AFA_10075 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AFA_05900 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_15190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_13035 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AFA_01745 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AFA_05205 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:afq02010]
D AFA_17255 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AFA_11195 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D AFA_17250 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AFA_11190 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AFA_17245 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AFA_11185 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AFA_11180 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AFA_04110 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AFA_16545 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AFA_16540 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AFA_04120 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AFA_16535 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AFA_04115 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AFA_00575 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AFA_04060 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AFA_00570 modB; molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AFA_04065 modB; molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AFA_04070 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AFA_14590 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_00175 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_04625 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_09340 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_11385 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_14580 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_00185 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_04630 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_09335 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_11375 phosphonate ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_14585 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_00180 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_09330 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_11370 sulfate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_04635 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_05315 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D AFA_05330 putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein
D AFA_05325 putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein
D AFA_05320 polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D AFA_12820 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AFA_18290 glycine/betaine ABC transporter substrate-binding protein K02001 proW; glycine betaine/proline transport system permease protein
D AFA_12815 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D AFA_12810 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D AFA_18285 ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D AFA_17120 ABC transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D AFA_17110 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AFA_00925 ABC transporter permease K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AFA_17105 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AFA_00915 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AFA_17100 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AFA_00920 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AFA_14675 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AFA_14685 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D AFA_14680 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AFA_14690 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D AFA_02270 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AFA_09390 sn-glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AFA_02275 ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AFA_09385 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AFA_02280 ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AFA_09380 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AFA_02265 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AFA_09375 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AFA_04205 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AFA_04210 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AFA_04215 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AFA_04220 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AFA_15375 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AFA_18130 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AFA_15365 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AFA_18120 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AFA_15370 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AFA_18125 phosphonate ABC transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AFA_05145 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D AFA_05135 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein
D AFA_05140 histidine ABC transporter permease K10016 hisQ; histidine transport system permease protein
D AFA_00395 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D AFA_03780 glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D AFA_03785 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein
D AFA_03790 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D AFA_08485 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D AFA_01055 amino acid ABC transporter substrate-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D AFA_01045 ABC transporter permease K10019 occM; octopine/nopaline transport system permease protein
D AFA_01050 hypothetical protein K10020 occQ; octopine/nopaline transport system permease protein
D AFA_01060 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D AFA_01120 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D AFA_15845 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D AFA_15840 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D AFA_15835 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D AFA_15830 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AFA_14145 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_18535 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_07195 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_07445 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_02955 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_01105 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_15010 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_13265 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_01480 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_06530 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_00105 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_09370 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_09400 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_18540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_07450 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_02960 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_01095 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_15005 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_13260 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_01475 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_00110 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_09405 branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D AFA_13255 metal-dependent hydrolase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_00115 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_09410 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D AFA_18545 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_01100 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_01470 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D AFA_07455 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D AFA_02965 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_07460 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_01090 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_02970 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_15000 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_01465 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_09415 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_00120 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_13240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_13250 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_09420 livF; branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_18555 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_01110 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_14995 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_01460 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_07465 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_02975 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_03775 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_00475 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_00480 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_00510 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_00520 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_03770 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AFA_00490 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AFA_03765 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AFA_00485 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AFA_17025 chain-length determining protein K10107 kpsE; capsular polysaccharide transport system permease protein
D AFA_17035 ABC transporter K09688 kpsM; capsular polysaccharide transport system permease protein
D AFA_17030 polysaccharide/polyol phosphate ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D AFA_07795 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D AFA_07800 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AFA_02900 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D AFA_02895 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D AFA_02890 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D AFA_02885 heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AFA_13025 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AFA_15705 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AFA_16355 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AFA_16935 hypothetical protein K19341 nosY; Cu-processing system permease protein
D AFA_16930 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D AFA_15855 permease K09811 ftsX; cell division transport system permease protein
D AFA_15850 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AFA_05420 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AFA_08765 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D AFA_04430 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D AFA_18090 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AFA_16305 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AFA_16310 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AFA_04415 macrolide ABC transporter permease/ATP-binding protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
C 02060 Phosphotransferase system (PTS) [PATH:afq02060]
D AFA_08695 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AFA_08690 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AFA_08685 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AFA_16365 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:afq03070]
D AFA_06430 hypothetical protein K12340 tolC; outer membrane protein
D AFA_16200 hypothetical protein K12340 tolC; outer membrane protein
D AFA_14260 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D
D AFA_14250 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F
D AFA_14300 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D AFA_14295 gspH; type II secretion system protein GspH K02457 gspH; general secretion pathway protein H
D AFA_14290 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I
D AFA_14285 HxcW pseudopilin K02459 gspJ; general secretion pathway protein J
D AFA_14280 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D AFA_14270 hypothetical protein K02462 gspM; general secretion pathway protein M
D AFA_14255 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AFA_03240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AFA_03235 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AFA_18385 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AFA_13445 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AFA_18010 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AFA_03245 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AFA_18600 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AFA_03715 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AFA_14900 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AFA_16450 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AFA_02425 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AFA_17190 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AFA_17195 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D AFA_17200 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
D AFA_12145 type VI secretion protein K03194 virB1; type IV secretion system protein VirB1
D AFA_12160 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3
D AFA_12175 type VI secretion protein K03200 virB5; type IV secretion system protein VirB5
D AFA_12195 hypothetical protein K03204 virB9; type IV secretion system protein VirB9
D AFA_12190 conjugal transfer protein TraJ K03203 virB8; type IV secretion system protein VirB8
D AFA_12200 type VI secretion protein K03195 virB10; type IV secretion system protein VirB10
D AFA_12165 type VI secretion protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D AFA_12205 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D AFA_09945 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D AFA_09970 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D AFA_09905 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D AFA_09910 DotU family type IV / VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D AFA_09950 clpV; ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG
D AFA_06045 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:afq02020]
D AFA_16240 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AFA_12465 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AFA_16235 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AFA_04205 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AFA_13325 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AFA_13320 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D AFA_13085 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D AFA_16080 efflux transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D AFA_16075 multidrug transporter subunit MdtC K07788 mdtB; multidrug efflux pump
D AFA_16070 multidrug transporter subunit MdtC K07789 mdtC; multidrug efflux pump
D AFA_01945 hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF
D AFA_06375 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AFA_06380 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D AFA_05730 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AFA_05735 transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AFA_06015 flagellin FliC K02406 fliC; flagellin
D AFA_06005 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AFA_05740 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AFA_09105 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D AFA_07315 sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AFA_07320 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AFA_07300 potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D AFA_07310 kdpB; K(+)-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D AFA_07305 potassium-transporting ATPase subunit C K01548 kdpC; potassium-transporting ATPase KdpC subunit
D AFA_14600 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AFA_16765 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AFA_14605 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D AFA_16770 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D AFA_14575 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D AFA_16750 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein
D AFA_16755 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D AFA_14570 tricarboxylate transporter K07794 tctB; putative tricarboxylic transport membrane protein
D AFA_16760 tricarboxylic transporter K07795 tctC; putative tricarboxylic transport membrane protein
D AFA_00210 ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AFA_17565 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D AFA_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AFA_16890 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D AFA_09200 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D AFA_13715 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D AFA_13695 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AFA_10915 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AFA_13690 type II secretion system protein K02280 cpaC; pilus assembly protein CpaC
D AFA_10910 secretion protein K02280 cpaC; pilus assembly protein CpaC
D AFA_13685 pilus assembly protein CpaF K02282 cpaE; pilus assembly protein CpaE
D AFA_13680 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AFA_10905 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AFA_10900 type II secretion protein F K12510 tadB; tight adherence protein B
D AFA_13675 hypothetical protein K12510 tadB; tight adherence protein B
D AFA_10895 type II secretion system protein F K12511 tadC; tight adherence protein C
D AFA_13670 type II secretion protein F K12511 tadC; tight adherence protein C
D AFA_13665 pilus assembly protein K27079 tadD; tight adherence protein D
D AFA_13655 hypothetical protein K27080 tadG; tight adherence protein G
D AFA_10235 [protein-PII] uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D AFA_10555 transcriptional regulator K04751 glnB; nitrogen regulatory protein P-II 1
D AFA_16490 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D AFA_16485 two-component system response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D AFA_04510 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D AFA_15175 short-chain fatty acid transporter K02106 atoE; short-chain fatty acids transporter
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_15235 C4-dicarboxylate transporter K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AFA_15230 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D AFA_15240 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D AFA_00760 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D AFA_05765 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AFA_01405 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AFA_05760 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AFA_05880 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AFA_05890 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AFA_06090 chemotaxis protein K03776 aer; aerotaxis receptor
D AFA_05755 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AFA_05750 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AFA_05775 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AFA_05770 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AFA_03100 hypothetical protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D AFA_03095 DNA-binding response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D AFA_03105 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D AFA_03110 TRAP transporter permease DctQ K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D AFA_00345 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_04965 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_00600 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_00630 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_00790 permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_00905 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_10675 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_02100 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_03115 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_09185 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D AFA_09195 tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D AFA_09190 tetrathionate reductase K08359 ttrC; tetrathionate reductase subunit C
D AFA_09155 hypothetical protein K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D AFA_09160 Fis family transcriptional regulator K17061 aauR; two-component system, response regulator AauR
D AFA_08485 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D AFA_01080 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AFA_17220 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D AFA_17225 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AFA_17230 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D AFA_10670 hypothetical protein K08738 CYC; cytochrome c
D AFA_09475 cytochrome C K08738 CYC; cytochrome c
D AFA_14175 hypothetical protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AFA_02610 hypothetical protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AFA_11775 ccoN; cytochrome-c oxidase, cbb3-type subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AFA_06385 hypothetical protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D AFA_14170 cytochrome-c oxidase K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AFA_02615 cytochrome-c oxidase K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AFA_11770 ccoO; cytochrome-c oxidase, cbb3-type subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AFA_06390 cytochrome-c oxidase K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D AFA_11765 CcoQ/FixQ family Cbb3-type cytochrome c oxidase assembly chaperone K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D AFA_11760 ccoP; cytochrome-c oxidase, cbb3-type subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D AFA_03580 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AFA_16325 cytochrome d terminal oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D AFA_03585 cytochrome oxidase K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AFA_16320 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D AFA_16315 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D AFA_06430 hypothetical protein K12340 tolC; outer membrane protein
D AFA_16200 hypothetical protein K12340 tolC; outer membrane protein
D AFA_17040 capsular biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D AFA_07710 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D AFA_17015 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D AFA_17010 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D AFA_00440 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D AFA_17485 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D AFA_01565 Fe2+-dicitrate sensor protein K07165 fecR; transmembrane sensor
D AFA_17480 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor
D AFA_00445 hypothetical protein K07165 fecR; transmembrane sensor
D AFA_18480 transmembrane sensor K07165 fecR; transmembrane sensor
D AFA_16165 hypothetical protein K07165 fecR; transmembrane sensor
D AFA_16725 hypothetical protein K07165 fecR; transmembrane sensor
D AFA_06145 iron dicitrate transport regulator FecR K07165 fecR; transmembrane sensor
D AFA_06415 hypothetical protein K07165 fecR; transmembrane sensor
D AFA_10945 hypothetical protein K07165 fecR; transmembrane sensor
D AFA_05815 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D AFA_17220 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:afq02024]
D AFA_11555 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D AFA_01360 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D AFA_01355 anthranilate/aminodeoxychorismate synthase component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D AFA_12580 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D AFA_06375 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AFA_06380 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D AFA_05730 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AFA_05735 transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AFA_07320 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AFA_07875 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D AFA_06330 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D AFA_07885 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D AFA_06345 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D AFA_06350 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D AFA_06355 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D AFA_07280 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AFA_07270 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AFA_07275 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AFA_07265 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AFA_14145 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_18535 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_07195 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_07445 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_02955 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_01105 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_15010 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_13265 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_01480 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_06530 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_00105 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_09370 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_09400 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_18540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_07450 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_02960 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_01095 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_15005 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_13260 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_01475 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_00110 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_09405 branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D AFA_13255 metal-dependent hydrolase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_00115 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_09410 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D AFA_18545 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_01100 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_01470 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D AFA_07455 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D AFA_02965 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_07460 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_01090 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_02970 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_15000 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_01465 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_09415 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_00120 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_13240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_13250 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_09420 livF; branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_18555 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_01110 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_14995 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_01460 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_07465 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_02975 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_03740 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_01085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_18185 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_01080 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AFA_01975 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D AFA_12500 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D AFA_09010 sulfatase modifying factor 1 -like protein K20333 toxD; toxoflavin biosynthesis protein ToxD
D AFA_15480 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D AFA_01555 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D AFA_14120 efflux transporter periplasmic adaptor subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D AFA_14125 multidrug efflux protein K18307 mexI; multidrug efflux pump
D AFA_04420 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_14045 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_10410 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_00430 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AFA_08910 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AFA_04730 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AFA_00425 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AFA_08915 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AFA_04735 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AFA_00420 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AFA_08920 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AFA_04740 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AFA_00415 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AFA_08925 microcin ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AFA_04745 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AFA_00410 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AFA_18600 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AFA_18385 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AFA_13445 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AFA_18010 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AFA_03245 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AFA_03715 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AFA_14900 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AFA_16450 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AFA_02425 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AFA_14215 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_15345 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_18110 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:afq02030]
D AFA_01405 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AFA_05760 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AFA_05880 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AFA_05890 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AFA_06090 chemotaxis protein K03776 aer; aerotaxis receptor
D AFA_05750 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AFA_05755 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AFA_05775 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AFA_05780 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D AFA_05770 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AFA_05765 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AFA_05960 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AFA_05930 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AFA_05925 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AFA_05740 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AFA_09105 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D AFA_05745 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AFA_09110 flagellar motor protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:afq02040]
D AFA_05970 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AFA_05965 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AFA_05960 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AFA_05955 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D AFA_05950 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AFA_05945 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D AFA_05940 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D AFA_05935 flagellar protein FliL K02415 fliL; flagellar protein FliL
D AFA_05930 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AFA_05925 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AFA_05920 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AFA_05915 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AFA_05910 fliQ; flagellar export apparatus protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AFA_05905 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AFA_09100 hypothetical protein K03516 flhE; flagellar protein FlhE
D AFA_05790 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AFA_05785 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AFA_05820 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D AFA_05825 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AFA_05830 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AFA_05835 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D AFA_05840 flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE
D AFA_05845 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D AFA_05850 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AFA_05855 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D AFA_05860 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AFA_05865 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AFA_05870 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D AFA_05875 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D AFA_06015 flagellin FliC K02406 fliC; flagellin
D AFA_05995 flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D AFA_05990 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D AFA_05985 flagellar protein FliT K02423 fliT; flagellar protein FliT
D AFA_05740 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AFA_09105 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D AFA_05745 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AFA_09110 flagellar motor protein K02557 motB; chemotaxis protein MotB
D AFA_05815 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D AFA_05810 flagellar synthesis chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D AFA_11510 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AFA_05730 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AFA_05735 transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AFA_00760 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D AFA_06005 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D AFA_12895 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:afq04980]
D AFA_01935 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D AFA_16145 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:afq01501]
D AFA_01840 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AFA_11820 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D AFA_17400 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AFA_11715 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AFA_10420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_15200 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_10415 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AFA_15195 multidrug transporter AcrB K18138 acrB; multidrug efflux pump
D AFA_04420 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_14045 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_10410 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_06430 hypothetical protein K12340 tolC; outer membrane protein
D AFA_16200 hypothetical protein K12340 tolC; outer membrane protein
D AFA_17905 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AFA_15870 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AFA_03645 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:afq01502]
D AFA_03680 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AFA_05290 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AFA_03655 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AFA_03670 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:afq01503]
D AFA_03960 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AFA_13085 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D AFA_00710 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AFA_10420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_15200 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_10415 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AFA_15195 multidrug transporter AcrB K18138 acrB; multidrug efflux pump
D AFA_06430 hypothetical protein K12340 tolC; outer membrane protein
D AFA_16200 hypothetical protein K12340 tolC; outer membrane protein
D AFA_10165 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:afq01000]
C 01001 Protein kinases [BR:afq01001]
D AFA_06045 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D AFA_09670 protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AFA_06280 hypothetical protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D AFA_17460 protein kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AFA_05800 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AFA_16240 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AFA_12465 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AFA_13325 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AFA_06375 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AFA_07315 sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AFA_14600 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AFA_16765 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AFA_15435 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AFA_16490 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D AFA_15235 C4-dicarboxylate transporter K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AFA_05750 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AFA_03100 hypothetical protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:afq01009]
D AFA_02025 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AFA_02390 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AFA_13350 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:afq01002]
D AFA_07510 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D AFA_11355 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AFA_13710 pilus assembly protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AFA_14100 glutamine amidotransferase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AFA_07845 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AFA_10755 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D AFA_10255 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D AFA_01770 glutamate synthase subunit alpha K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D AFA_17495 glmS; glutamine--fructose-6-phosphate transaminase (isomerizing) K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D AFA_12675 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D AFA_10305 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D AFA_13750 peptidase M16 K07263 pqqL; zinc protease [EC:3.4.24.-]
D AFA_13030 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D AFA_07575 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D AFA_10230 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AFA_03230 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D AFA_12930 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D AFA_04175 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AFA_11880 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D AFA_05165 zinc metalloprotease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D AFA_06665 peptidase K07387 K07387; metalloprotease [EC:3.4.24.-]
D AFA_14410 peptidase K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D AFA_10190 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D AFA_13085 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D AFA_17205 2-alkenal reductase K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D AFA_01225 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AFA_09095 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AFA_03260 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AFA_08130 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AFA_07675 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D AFA_07685 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D AFA_07690 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AFA_13075 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D AFA_02445 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D AFA_16425 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D AFA_10575 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D AFA_15015 penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D AFA_10650 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D AFA_01955 HslU--HslV peptidase proteolytic subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D AFA_03475 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_17830 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_04435 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D AFA_01315 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D AFA_01310 protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D AFA_15555 metalloprotease PmbA K03592 pmbA; PmbA protein
D AFA_12660 metalloprotease TldD K03568 tldD; TldD protein
D AFA_11095 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
D AFA_11540 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D AFA_11545 hflK; FtsH protease activity modulator HflK K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:afq01003]
D AFA_15700 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AFA_11090 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D AFA_17905 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AFA_08835 pgaC; poly-beta-1,6 N-acetyl-D-glucosamine synthase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:afq01005]
D AFA_10165 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D AFA_10160 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D AFA_03700 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D AFA_10175 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D AFA_04540 UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D AFA_07370 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D AFA_02010 acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AFA_02015 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D AFA_04140 aspartyl beta-hydroxylase K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D AFA_01195 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D AFA_05310 3-deoxy-D-manno-octulosonic acid kinase K11211 kdkA; 3-deoxy-D-manno-octulosonic acid kinase [EC:2.7.1.166]
D AFA_12920 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D AFA_07360 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D AFA_16340 phenylphosphate carboxylase subunit delta K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D AFA_16335 D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D AFA_11955 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D AFA_16205 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D AFA_01190 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D AFA_05415 heptosyltransferase K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D AFA_16580 hypothetical protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D AFA_16395 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D AFA_03845 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D AFA_11950 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D AFA_03000 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:afq01011]
D AFA_17140 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D AFA_13810 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D AFA_03675 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D AFA_03660 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D AFA_03650 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10]
D AFA_03680 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D AFA_05290 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D AFA_14200 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D AFA_10650 LD-carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D AFA_03655 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D AFA_03670 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D AFA_04535 undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D AFA_07345 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AFA_02725 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D AFA_17905 penicillin-binding protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D AFA_11090 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D AFA_15870 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D AFA_03645 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AFA_01225 peptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D AFA_03260 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D AFA_09095 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D AFA_15700 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D AFA_02045 lytic transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AFA_01385 hypothetical protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D AFA_11935 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D AFA_15220 lytic transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D AFA_10085 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D AFA_16380 septal ring lytic transglycosylase RlpA family lipoprotein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D AFA_03960 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AFA_13160 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AFA_02410 N-acetylmuramoyl-L-alanine amidase K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:afq01004]
D AFA_13125 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AFA_04470 MdcH K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D AFA_13130 3-oxoacyl-ACP synthase K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AFA_01585 hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D AFA_13110 fabF; beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D AFA_00325 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_05295 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_06550 short-chain dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_13120 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_17420 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_10360 dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_03415 fabG; 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_09120 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D AFA_10170 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D AFA_15225 enoyl-[acyl-carrier-protein] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D AFA_08070 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D AFA_03730 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D AFA_07535 acyl-CoA desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D AFA_12960 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_04225 AMP-dependent synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D AFA_15955 CoA-binding protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13]
D AFA_03740 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_01085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_18185 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_00125 substrate-CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D AFA_13135 phosphate acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D AFA_10610 glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D AFA_03840 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D AFA_15715 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:afq01008]
D AFA_01420 2,3-dihydro-2,3-dihydroxybenzoate synthetase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14]
D AFA_01450 (2,3-dihydroxybenzoyl)adenylate synthase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71]
D AFA_01440 non-ribosomal peptide synthetase K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72]
D AFA_02405 alpha-hydroxy-acid oxidizing enzyme K16422 hmo; 4-hydroxymandelate oxidase [EC:1.1.3.46]
C 01006 Prenyltransferases [BR:afq01006]
D AFA_05185 geranyl transferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D AFA_16045 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D AFA_10205 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D AFA_05280 hpnD; squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D AFA_03925 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AFA_17645 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D AFA_17570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:afq01007]
D AFA_15595 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AFA_03575 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AFA_00665 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AFA_15500 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AFA_04915 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AFA_04555 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AFA_00720 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AFA_02550 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AFA_07515 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AFA_11605 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AFA_12845 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AFA_07745 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AFA_17625 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AFA_11580 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AFA_03855 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AFA_03850 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AFA_13540 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AFA_14615 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AFA_08670 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AFA_01905 threonine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AFA_11635 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AFA_08735 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AFA_08740 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AFA_00190 aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D AFA_12080 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D AFA_05250 alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D AFA_17755 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_07700 aromatic amino acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D AFA_18435 methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D AFA_11560 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D AFA_04375 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AFA_17045 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D AFA_14195 aspartate aminotransferase family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D AFA_00460 acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D AFA_12635 ectB; diaminobutyrate--2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D AFA_04370 bioA; adenosylmethionine--8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D AFA_15745 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D AFA_01230 D-amino acid aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D AFA_01595 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D AFA_14075 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D AFA_12000 phosphoserine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00199 Cytochrome P450 [BR:afq00199]
C 00194 Photosynthesis proteins [BR:afq00194]
D AFA_16605 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D AFA_16610 atpD; F0F1 ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D AFA_16615 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D AFA_16620 F0F1 ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D AFA_16625 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D AFA_16630 F0F1 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D AFA_16635 F0F1 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D AFA_16640 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AFA_16645 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:afq03000]
D AFA_06305 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AFA_17695 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D AFA_18230 AraC family transcriptional regulator K18991 mtrA; AraC family transcriptional regulator, activator of mtrCDE
D AFA_11450 AraC family transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT
D AFA_02940 bifunctional transcriptional regulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D AFA_00090 hypothetical protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AFA_00170 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AFA_14780 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AFA_17735 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AFA_17750 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AFA_03290 transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AFA_06130 LysR family transcriptional regulator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D AFA_07965 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D AFA_11010 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D AFA_09360 LysR family transcriptional regulator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D AFA_12105 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D AFA_13910 transcriptional regulator K05817 hcaR; LysR family transcriptional regulator, hca operon transcriptional activator
D AFA_10465 LysR family transcriptional regulator K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D AFA_02875 transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D AFA_12980 transcriptional regulator K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D AFA_09165 LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC
D AFA_04465 LysR family transcriptional regulator K13928 mdcR; LysR family transcriptional regulator, malonate utilization transcriptional regulator
D AFA_02490 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D AFA_05550 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
D AFA_09090 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D AFA_14190 LuxR family transcriptional regulator K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D AFA_15350 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D AFA_11365 LysR family transcriptional regulator K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
D AFA_08240 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D AFA_08555 LysR family transcriptional regulator K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D AFA_02260 DeoR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D AFA_17690 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D AFA_00140 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D AFA_04845 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D AFA_15050 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D AFA_02235 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D AFA_05490 transcriptional regulator GlcC K11474 glcC; GntR family transcriptional regulator, glc operon transcriptional activator
D AFA_04880 transcriptional regulator LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D AFA_02220 transcriptional regulator LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator
D AFA_14080 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D AFA_12110 DNA-binding protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D AFA_11290 GntR family transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D AFA_02345 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AFA_12085 hypothetical protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D AFA_17335 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AFA_17500 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AFA_15610 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AFA_13875 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AFA_07225 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D AFA_06500 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D AFA_08345 MarR family transcriptional regulator K22296 nicR; MarR family transcriptional regulator, lower aerobic nicotinate degradation pathway regulator
D AFA_13730 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AFA_01485 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D AFA_10335 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AFA_14115 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D AFA_07645 soxR; redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D AFA_08035 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AFA_13790 ferric iron uptake transcriptional regulator K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D AFA_01975 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D AFA_14365 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D AFA_10380 hypothetical protein K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D AFA_10720 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D AFA_02120 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor
D AFA_14855 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D AFA_15310 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D AFA_01080 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D AFA_11740 transcriptional regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D AFA_01295 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D AFA_16820 Crp/Fnr family transcriptional regulator K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D AFA_15980 Crp/Fnr family transcriptional regulator K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D AFA_07715 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D AFA_02990 Rrf2 family transcriptional regulator K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D AFA_07920 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AFA_15410 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D AFA_08215 transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
D AFA_18140 transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D AFA_01215 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D AFA_14440 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AFA_04825 prpR; propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D AFA_05805 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D AFA_17455 sigma-54-dependent Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D AFA_04755 Fis family transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D AFA_15975 nitric oxide reductase transcription regulator K12266 norR; anaerobic nitric oxide reductase transcription regulator
D AFA_04075 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein
D AFA_17670 transcriptional regulator K07726 K07726; putative transcriptional regulator
D AFA_02480 transcriptional regulator K07729 K07729; putative transcriptional regulator
D AFA_07440 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AFA_13870 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D AFA_16915 4Fe-4S binding protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D AFA_13280 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D AFA_12295 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AFA_18415 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AFA_13775 heat-inducible transcriptional repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D AFA_04315 paaX; phenylacetic acid degradation operon negative regulatory protein PaaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D AFA_13595 transcriptional regulator K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D AFA_07855 transcriptional regulator K07733 alpA; prophage regulatory protein
D AFA_12115 transcriptional regulator K07734 paiB; transcriptional regulator
D AFA_15725 hypothetical protein K07735 algH; putative transcriptional regulator
D AFA_01965 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AFA_15485 transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D AFA_06795 hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB
D AFA_03630 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:afq03021]
D AFA_08390 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D AFA_17980 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AFA_18355 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AFA_18350 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AFA_10495 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AFA_11510 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D AFA_13100 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D AFA_00440 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D AFA_17485 RNA polymerase subunit sigma K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D AFA_17600 RNA polymerase factor sigma-32 K03089 rpoH; RNA polymerase sigma-32 factor
D AFA_00760 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D AFA_06005 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AFA_05100 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D AFA_14875 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D AFA_18380 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AFA_17235 glutathione S-transferase K03599 sspA; stringent starvation protein A
D AFA_17240 ClpXP protease specificity-enhancing factor K03600 sspB; stringent starvation protein B
D AFA_13095 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D AFA_13090 siderophore-interacting protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D AFA_01965 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AFA_04160 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D AFA_07825 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D AFA_11705 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:afq03019]
D AFA_13185 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D AFA_05435 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AFA_13070 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AFA_11305 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AFA_11875 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AFA_14385 ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AFA_00840 RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D AFA_03600 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AFA_12895 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AFA_13475 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AFA_11705 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D AFA_13760 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AFA_14830 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AFA_11555 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D AFA_04200 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D AFA_03900 poly(A) polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D AFA_14610 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D AFA_16375 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ
D AFA_05365 hrpA; ATP-dependent RNA helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:afq03011]
D AFA_11975 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D AFA_10225 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D AFA_18250 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D AFA_17985 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D AFA_18025 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D AFA_05200 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D AFA_18310 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D AFA_18040 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D AFA_15540 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D AFA_18295 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D AFA_17990 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D AFA_18315 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D AFA_17995 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D AFA_18045 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D AFA_13480 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D AFA_11625 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D AFA_18235 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D AFA_05210 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D AFA_18260 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D AFA_07340 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D AFA_11520 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D AFA_18370 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D AFA_18265 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D AFA_18280 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D AFA_18275 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D AFA_18050 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D AFA_18035 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D AFA_05215 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D AFA_18365 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D AFA_18375 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D AFA_18360 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D AFA_15545 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D AFA_18060 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D AFA_18015 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D AFA_18245 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D AFA_17975 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D AFA_18030 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D AFA_11895 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D AFA_08730 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D AFA_15775 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D AFA_18255 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D AFA_18270 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D AFA_18055 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D AFA_15780 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D AFA_12835 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D AFA_18240 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D AFA_18020 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D AFA_12795 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D AFA_13140 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D AFA_12840 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D AFA_18615 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D AFA_08725 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D AFA_18000 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D AFA_02815 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25
D AFA_01265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:afq03009]
D AFA_13070 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AFA_11875 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-]
D AFA_13065 GTPase Era K03595 era; GTPase
D AFA_15785 GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D AFA_01965 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D AFA_05100 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
D AFA_14875 N utilization substance protein B K03625 nusB; transcription antitermination protein NusB
D AFA_18380 transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D AFA_00020 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D AFA_03820 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D AFA_16500 16S rRNA (cytosine(967)-C(5))-methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AFA_07530 rRNA methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D AFA_14905 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D AFA_03380 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D AFA_18425 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AFA_03635 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D AFA_13155 SAM-dependent methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AFA_16385 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D AFA_17385 rRNA (guanine-N1)-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187]
D AFA_11300 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D AFA_04170 rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D AFA_07495 23S rRNA (adenine(1618)-N(6))-methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D AFA_12735 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D AFA_10530 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D AFA_12870 DNA methyltransferase K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D AFA_11595 rlmN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D AFA_10590 23S rRNA (uracil(1939)-C(5))-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D AFA_01035 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AFA_05090 23S rRNA pseudouridylate synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D AFA_13180 RNA pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D AFA_04980 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D AFA_10535 pseudouridylate synthase K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D AFA_11620 ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D AFA_16505 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D AFA_15650 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D AFA_07570 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D AFA_04390 cupin K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D AFA_13185 ribonuclease E/G K08300 rne; ribonuclease E [EC:3.1.26.12]
D AFA_05435 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-]
D AFA_15720 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D AFA_13895 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D AFA_11885 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D AFA_11565 der; ribosome biogenesis GTPase Der K03977 engA; GTPase
D AFA_11550 hflX; GTPase HflX K03665 hflX; GTPase
D AFA_03445 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AFA_10500 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D AFA_05110 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D AFA_05095 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP
D AFA_12730 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D AFA_03210 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor
D AFA_04165 hypothetical protein K07574 yhbY; RNA-binding protein
D AFA_15560 hypothetical protein K09889 yjgA; ribosome-associated protein
D AFA_16360 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D AFA_02830 ychF; redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase
D AFA_13145 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:afq03016]
D AFA_15045 MBL fold hydrolase K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D AFA_02050 tRNA CCA-pyrophosphorylase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D AFA_15595 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AFA_14615 proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D AFA_07515 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D AFA_12845 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AFA_02550 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D AFA_03575 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D AFA_00720 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AFA_07745 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D AFA_17625 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AFA_01905 threonine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AFA_11635 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D AFA_08670 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D AFA_13540 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D AFA_04555 cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D AFA_11605 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D AFA_11580 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D AFA_08735 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D AFA_08740 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D AFA_15500 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AFA_04915 tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D AFA_06640 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D AFA_17185 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AFA_02450 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D AFA_10795 tRNA pseudouridine(38-40) synthase TruA K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D AFA_05115 tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D AFA_07720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AFA_03445 threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D AFA_03925 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D AFA_18505 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D AFA_18430 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AFA_16905 selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D AFA_18610 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D AFA_03625 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D AFA_09290 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D AFA_15685 ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D AFA_00880 RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D AFA_03540 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA
D AFA_03855 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D AFA_03850 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D AFA_00665 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D AFA_10655 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D AFA_10875 tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D AFA_14435 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D AFA_03220 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D AFA_04520 RNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D AFA_11615 tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D AFA_16465 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D AFA_10150 RNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D AFA_01035 pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D AFA_12570 tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D AFA_16665 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D AFA_11630 hypothetical protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D AFA_07730 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D AFA_10090 hypothetical protein K06980 ygfZ; tRNA-modifying protein YgfZ
D AFA_03750 hypothetical protein K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D AFA_03255 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D AFA_14065 queC; 7-cyano-7-deazaguanine synthase QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D AFA_11800 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D AFA_11730 hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D AFA_16910 tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D AFA_03250 tRNA guanosine(34) transglycosylase Tgt K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D AFA_04570 tilS; tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D AFA_13315 bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB/ribosomal-protein-alanine acetyltransferase RimI K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D AFA_10615 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D AFA_03965 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D AFA_03505 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D AFA_11305 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D AFA_13475 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D AFA_16960 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
C 03012 Translation factors [BR:afq03012]
D AFA_12760 translation initiation factor K03113 EIF1; translation initiation factor 1
D AFA_05105 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AFA_08675 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AFA_07565 ABC transporter K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D AFA_10220 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D AFA_18300 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AFA_18395 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AFA_10315 fusA; elongation factor G K02355 fusA; elongation factor G
D AFA_18305 fusA; elongation factor G K02355 fusA; elongation factor G
D AFA_16860 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D AFA_16685 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D AFA_10210 ribosome recycling factor K02838 frr; ribosome recycling factor
D AFA_16680 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D AFA_02820 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D AFA_07765 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AFA_18005 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D AFA_04770 efp; elongation factor P K02356 efp; elongation factor P
D AFA_00830 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
C 03110 Chaperones and folding catalysts [BR:afq03110]
D AFA_07420 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D AFA_11735 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D AFA_07680 ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D AFA_01950 HslU--HslV peptidase ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D AFA_02390 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AFA_13760 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AFA_14830 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AFA_13755 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AFA_12880 redox-regulated molecular chaperone Hsp33 K04083 hslO; molecular chaperone Hsp33
D AFA_13765 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AFA_09225 hypothetical protein K13993 HSP20; HSP20 family protein
D AFA_02335 RNA-binding protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D AFA_14825 co-chaperone GroES K04078 groES; chaperonin GroES
D AFA_13085 serine peptidase K04771 degP; serine protease Do [EC:3.4.21.107]
D AFA_04175 cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D AFA_16640 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D AFA_16450 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AFA_08115 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D AFA_14660 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D AFA_06475 transporter K09796 pccA; periplasmic copper chaperone A
D AFA_04545 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D AFA_10520 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D AFA_12785 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D AFA_02300 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D AFA_13285 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D AFA_03815 molecular chaperone SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D AFA_14380 thiol reductase thioredoxin K03671 TXN; thioredoxin
D AFA_11700 thioredoxin K03671 TXN; thioredoxin
D AFA_10625 trxA; thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D AFA_16445 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D AFA_16675 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D AFA_00710 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D AFA_10245 disulfide bond formation protein B K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D AFA_09705 disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AFA_01395 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AFA_17950 protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
D AFA_02915 thiol:disulfide interchange protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
D AFA_12745 thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG
C 04131 Membrane trafficking [BR:afq04131]
D AFA_11600 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D AFA_12480 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AFA_03390 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AFA_16435 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AFA_02640 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AFA_02390 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AFA_12965 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:afq03051]
D AFA_02390 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:afq03032]
D AFA_15205 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D AFA_06305 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AFA_11230 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AFA_08745 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AFA_11970 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AFA_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AFA_05220 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D AFA_11515 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D AFA_09845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_12270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_17875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AFA_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AFA_13035 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AFA_12855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AFA_10075 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AFA_05900 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_15190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_04095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AFA_10155 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D AFA_05155 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AFA_13290 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AFA_03910 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D AFA_12005 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AFA_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AFA_11690 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AFA_11695 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AFA_00645 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:afq03036]
D AFA_06305 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AFA_13070 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D AFA_12665 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D AFA_09720 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D AFA_12135 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D AFA_11230 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AFA_08745 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AFA_11970 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AFA_00005 chromosomal replication initiation protein DnaA K02313 dnaA; chromosomal replication initiator protein
D AFA_09365 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein
D AFA_14440 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AFA_11555 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D AFA_12105 ArgP/LysG family DNA-binding transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D AFA_17335 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AFA_17500 AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AFA_15610 Lrp/AsnC family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AFA_13875 ArsR family transcriptional regulator K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D AFA_13300 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D AFA_16110 segregation/condensation protein A K05896 scpA; segregation and condensation protein A
D AFA_05085 scpB; SMC-Scp complex subunit ScpB K06024 scpB; segregation and condensation protein B
D AFA_03690 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AFA_12890 cell division protein FtsB K05589 ftsB; cell division protein FtsB
D AFA_15850 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AFA_03645 cell division protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D AFA_13555 cell division protein FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D AFA_03640 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D AFA_03685 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D AFA_03665 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D AFA_15855 permease K09811 ftsX; cell division transport system permease protein
D AFA_03695 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AFA_14560 cell division protein ZapA K09888 zapA; cell division protein ZapA
D AFA_16085 cell division protein ZapD K18778 zapD; cell division protein ZapD
D AFA_04910 cell division protein ZapE K06916 zapE; cell division protein ZapE
D AFA_03960 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D AFA_10420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_15200 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_03570 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D AFA_03565 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AFA_03560 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D AFA_15885 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AFA_15880 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D AFA_15875 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D AFA_15865 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D AFA_18420 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D AFA_12295 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AFA_18415 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AFA_11690 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AFA_11695 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AFA_18430 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D AFA_18425 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D AFA_01995 tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D AFA_04055 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D AFA_02560 Fe-S-binding ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AFA_17940 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:afq03400]
D AFA_01690 cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D AFA_14485 deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D AFA_01260 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D AFA_04700 3-methyladenine DNA glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D AFA_15860 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D AFA_13235 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AFA_08390 ATP-dependent DNA helicase K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D AFA_08050 ADP-ribose pyrophosphatase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AFA_16055 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AFA_07240 DNA mismatch repair protein MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D AFA_07500 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D AFA_02940 bifunctional transcriptional regulator/O6-methylguanine-DNA methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D AFA_11430 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33]
D AFA_13310 uracil-DNA glycosylase K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D AFA_15630 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AFA_04560 DNA-3-methyladenine glycosylase K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D AFA_02785 DNA-formamidopyrimidine glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D AFA_10480 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AFA_15925 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D AFA_07785 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D AFA_13290 DNA ligase (NAD(+)) LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D AFA_05155 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D AFA_03520 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D AFA_17885 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D AFA_07705 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D AFA_11815 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D AFA_07540 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D AFA_18355 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D AFA_18350 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D AFA_17980 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D AFA_10495 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D AFA_13340 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D AFA_04395 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D AFA_03930 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D AFA_07385 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D AFA_05180 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D AFA_07205 DNA polymerase III subunit epsilon K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D AFA_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D AFA_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D AFA_13035 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D AFA_12855 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D AFA_10075 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D AFA_05900 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_15190 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D AFA_04095 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D AFA_09845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_12270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_17875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_14455 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D AFA_14465 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D AFA_14450 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D AFA_01745 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D AFA_05205 priB; primosomal replication protein N K02686 priB; primosomal replication protein N
D AFA_05300 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D AFA_09355 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D AFA_13060 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D AFA_04105 recombination protein RecR K06187 recR; recombination protein RecR
D AFA_13785 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D AFA_11040 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D AFA_06705 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC
D AFA_04080 hypothetical protein K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D AFA_12705 ATP-binding protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D AFA_12005 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D AFA_00015 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D AFA_11230 HU family DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D AFA_14440 Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D AFA_08745 integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha
D AFA_11970 integration host factor subunit beta K05788 ihfB; integration host factor subunit beta
D AFA_03600 recQ; DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D AFA_12665 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D AFA_09720 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D AFA_12135 DNA-binding protein K03746 hns; DNA-binding protein H-NS
D AFA_00435 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D AFA_07690 repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D AFA_09060 hypothetical protein K14160 imuA; protein ImuA
D AFA_09055 hypothetical protein K14161 imuB; protein ImuB
D AFA_09050 error-prone DNA polymerase K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D AFA_11015 recombination regulator RecX K03565 recX; regulatory protein
D AFA_01750 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D AFA_04935 helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D AFA_03605 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D AFA_03610 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:afq03029]
D AFA_17225 cytochrome b K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D AFA_05105 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D AFA_08675 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D AFA_10220 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D AFA_18300 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AFA_18395 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AFA_10315 fusA; elongation factor G K02355 fusA; elongation factor G
D AFA_18305 fusA; elongation factor G K02355 fusA; elongation factor G
D AFA_01545 helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D AFA_13065 GTPase Era K03595 era; GTPase
D AFA_15500 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D AFA_12845 leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D AFA_17625 aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D AFA_00720 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D AFA_08445 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_13980 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_01155 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_02105 amidase K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_15895 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D AFA_15900 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D AFA_15890 Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D AFA_07620 endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D AFA_09845 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_12270 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_17875 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D AFA_10185 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D AFA_13760 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AFA_13765 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D AFA_14830 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AFA_14825 co-chaperone GroES K04078 groES; chaperonin GroES
D AFA_13755 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ
D AFA_07720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D AFA_16675 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D AFA_02560 Fe-S-binding ATPase K03593 mrp; ATP-binding protein involved in chromosome partitioning
D AFA_17570 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D AFA_17565 heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D AFA_18600 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AFA_17555 hypothetical protein K14998 SURF1; surfeit locus 1 family protein
D AFA_02625 SCO family protein K07152 SCO1; protein SCO1
D AFA_10310 SCO family protein K07152 SCO1; protein SCO1
D AFA_06480 SCO family protein K07152 SCO1; protein SCO1
D AFA_02390 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:afq02000]
D AFA_05420 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D AFA_08765 metal ABC transporter permease K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D AFA_04430 multidrug ABC transporter ATP-binding protein K18893 vcaM; ATP-binding cassette, subfamily B, multidrug efflux pump
D AFA_18090 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AFA_16305 cydC; thiol reductant ABC exporter subunit CydC K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC
D AFA_16310 cydD; thiol reductant ABC exporter subunit CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD
D AFA_04415 macrolide ABC transporter permease/ATP-binding protein MacB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D AFA_03620 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D AFA_17255 thiosulfate transporter subunit K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D AFA_11195 sulfate transporter subunit K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D AFA_17250 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AFA_11190 cysT; sulfate ABC transporter permease subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D AFA_17245 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AFA_11185 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D AFA_11180 sulfate ABC transporter ATP-binding protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D AFA_00575 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AFA_04060 modA; molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D AFA_00570 modB; molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AFA_04065 modB; molybdenum ABC transporter permease subunit K02018 modB; molybdate transport system permease protein
D AFA_04070 ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D AFA_04110 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AFA_16545 ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein
D AFA_16540 nitrate ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AFA_04120 ABC transporter permease K15554 ssuC; sulfonate transport system permease protein
D AFA_16535 ABC transporter K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AFA_04115 mannosyltransferase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D AFA_14590 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_00175 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_04625 ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_09340 iron ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_11385 putative 2-aminoethylphosphonate ABC transporter substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D AFA_14580 ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_00185 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_04630 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_09335 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_11375 phosphonate ABC transporter permease K02011 afuB; iron(III) transport system permease protein
D AFA_14585 ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_00180 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_09330 ABC transporter K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_11370 sulfate ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_04635 iron ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D AFA_05315 polyamine ABC transporter substrate-binding protein K11073 potF; putrescine transport system substrate-binding protein
D AFA_05330 putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein
D AFA_05325 putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein
D AFA_05320 polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D AFA_07280 ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D AFA_07270 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AFA_07275 ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D AFA_07265 Fe3+/spermidine/putrescine ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D AFA_12820 glycine/betaine ABC transporter substrate-binding protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D AFA_18290 glycine/betaine ABC transporter substrate-binding protein K02001 proW; glycine betaine/proline transport system permease protein
D AFA_12815 ABC transporter permease K02001 proW; glycine betaine/proline transport system permease protein
D AFA_12810 glycine/betaine ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D AFA_18285 ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D AFA_18210 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D AFA_01655 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D AFA_16815 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D AFA_18205 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AFA_01495 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AFA_01645 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AFA_16810 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D AFA_18215 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AFA_01500 nitrate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AFA_01650 nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AFA_16805 nitrate ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D AFA_02270 ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AFA_09390 sn-glycerol-3-phosphate ABC transporter substrate-binding protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D AFA_02275 ABC transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AFA_09385 glycerol-3-phosphate transporter permease K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D AFA_02280 ABC transporter permease K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AFA_09380 glycerol-3-phosphate transporter K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D AFA_02265 ABC transporter ATP-binding protein K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AFA_09375 ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D AFA_14675 BMP family ABC transporter substrate-binding protein K07335 bmpA; basic membrane protein A and related proteins
D AFA_14685 sugar ABC transporter permease K23535 nupB; general nucleoside transport system permease protein
D AFA_14680 ABC transporter permease K23536 nupC; general nucleoside transport system permease protein
D AFA_14690 ABC transporter K23537 nupA; general nucleoside transport system ATP-binding protein
D AFA_17110 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AFA_00925 ABC transporter permease K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D AFA_17105 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AFA_00915 ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D AFA_17100 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AFA_00920 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D AFA_00930 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D AFA_17120 ABC transporter K07323 mlaC; phospholipid transport system substrate-binding protein
D AFA_11675 glycerol-3-phosphate ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D AFA_04205 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D AFA_04210 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein
D AFA_04215 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D AFA_04220 phosphate ABC transporter ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D AFA_15375 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AFA_18130 phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D AFA_15365 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AFA_18120 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D AFA_15370 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AFA_18125 phosphonate ABC transporter K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D AFA_05145 ABC transporter substrate-binding protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D AFA_05135 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein
D AFA_05140 histidine ABC transporter permease K10016 hisQ; histidine transport system permease protein
D AFA_00395 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D AFA_03780 glutamine ABC transporter substrate-binding protein GlnH K10036 glnH; glutamine transport system substrate-binding protein
D AFA_03785 amino acid ABC transporter permease K10037 glnP; glutamine transport system permease protein
D AFA_03790 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D AFA_08485 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D AFA_01055 amino acid ABC transporter substrate-binding protein K10018 occT; octopine/nopaline transport system substrate-binding protein
D AFA_01045 ABC transporter permease K10019 occM; octopine/nopaline transport system permease protein
D AFA_01050 hypothetical protein K10020 occQ; octopine/nopaline transport system permease protein
D AFA_01060 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein K10021 occP; octopine/nopaline transport system ATP-binding protein [EC:7.4.2.1]
D AFA_01120 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D AFA_15845 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D AFA_15840 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein
D AFA_15835 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein
D AFA_15830 ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1]
D AFA_14145 amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_18535 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_07195 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_07445 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_02955 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_01105 ABC transporter permease K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_15010 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_13265 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_01480 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_06530 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_00105 ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_09370 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_09400 leucine ABC transporter subunit substrate-binding protein LivK K01999 livK; branched-chain amino acid transport system substrate-binding protein
D AFA_18540 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_07450 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_02960 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_01095 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_15005 ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_13260 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_01475 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_00110 branched-chain amino acid ABC transporter permease K01997 livH; branched-chain amino acid transport system permease protein
D AFA_09405 branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein
D AFA_13255 metal-dependent hydrolase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_00115 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_09410 livM; high-affinity branched-chain amino acid ABC transporter permease LivM K01998 livM; branched-chain amino acid transport system permease protein
D AFA_18545 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_01100 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_01470 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D AFA_07455 ABC transporter ATP-binding protein K01998 livM; branched-chain amino acid transport system permease protein
D AFA_02965 branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein
D AFA_07460 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_01090 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_02970 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_15000 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_01465 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_09415 livG; high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_00120 ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D AFA_13240 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_13250 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_09420 livF; branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_18555 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_01110 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_14995 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_01460 branched-chain amino acid ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_07465 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_02975 ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D AFA_03775 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_00475 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_00480 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_00510 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_00520 metal ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein
D AFA_03770 metal ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AFA_00490 ABC transporter permease K02072 metI; D-methionine transport system permease protein
D AFA_03765 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AFA_00485 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D AFA_10435 ABC transporter substrate-binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D AFA_10430 ABC transporter permease K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D AFA_10425 ABC transporter ATP-binding protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D AFA_08470 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AFA_04255 restriction endonuclease K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AFA_12595 ehuB; ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AFA_01665 amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D AFA_12605 ehuD; ectoine/hydroxyectoine ABC transporter permease subunit EhuD K02029 ABC.PA.P; polar amino acid transport system permease protein
D AFA_08475 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AFA_08480 amino acid permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AFA_12600 ehuC; ectoine/hydroxyectoine ABC transporter permease subunit EhuC K02029 ABC.PA.P; polar amino acid transport system permease protein
D AFA_01675 polar amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein
D AFA_00430 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AFA_08910 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AFA_04730 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D AFA_00425 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AFA_08915 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AFA_04735 peptide ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D AFA_00420 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AFA_08920 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AFA_04740 peptide ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D AFA_00415 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AFA_08925 microcin ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AFA_04745 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D AFA_00410 ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D AFA_13000 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AFA_01525 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AFA_15165 hypothetical protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AFA_16155 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D AFA_13005 iron-siderophore ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D AFA_01535 iron-siderophore ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D AFA_15160 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein
D AFA_13010 ferrichrome ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AFA_01530 iron ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AFA_15155 ABC transporter K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D AFA_01990 metal ABC transporter substrate-binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D AFA_01985 zinc ABC transporter permease K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D AFA_01980 ABC transporter K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D AFA_17035 ABC transporter K09688 kpsM; capsular polysaccharide transport system permease protein
D AFA_17025 chain-length determining protein K10107 kpsE; capsular polysaccharide transport system permease protein
D AFA_17030 polysaccharide/polyol phosphate ABC transporter ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D AFA_13025 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein
D AFA_15705 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein
D AFA_16355 lptB; LPS export ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D AFA_16935 hypothetical protein K19341 nosY; Cu-processing system permease protein
D AFA_16930 ABC transporter ATP-binding protein K19340 nosF; Cu-processing system ATP-binding protein
D AFA_07795 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein
D AFA_07800 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D AFA_02900 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D
D AFA_02895 heme ABC transporter permease K02195 ccmC; heme exporter protein C
D AFA_02890 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B
D AFA_02885 heme ABC exporter ATP-binding protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D AFA_15855 permease K09811 ftsX; cell division transport system permease protein
D AFA_15850 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D AFA_17130 metal-dependent hydrolase K01992 ABC-2.P; ABC-2 type transport system permease protein
D AFA_14030 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D AFA_10665 sugar ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein
D AFA_08300 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AFA_17125 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AFA_10660 multidrug ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D AFA_12345 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AFA_06055 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein
D AFA_12340 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AFA_06050 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D AFA_08780 sufC; Fe-S cluster assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D AFA_05225 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D AFA_10765 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D AFA_12805 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D AFA_14670 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump
D AFA_08440 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D AFA_13580 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D AFA_16780 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D AFA_03330 hypothetical protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D AFA_06595 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D AFA_02510 MFS transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein
D AFA_05540 aromatic acid/H+ symport family MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D AFA_13965 3-(3-hydroxy-phenyl)propionate transporter MhpT K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter
D AFA_08580 aromatic acid/H+ symport family MFS transporter K05548 benK; MFS transporter, AAHS family, benzoate transport protein
D AFA_11445 MFS transporter K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter
D AFA_08710 TetR family transcriptional regulator K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D AFA_09480 MFS transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D AFA_13305 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D AFA_01435 MFS transporter K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter
D AFA_01840 MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D AFA_17715 chloramphenicol efflux MFS transporter K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D AFA_12830 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AFA_17855 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AFA_01550 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AFA_13845 multidrug transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D AFA_08195 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D AFA_11440 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D AFA_11805 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D AFA_12965 MFS transporter K06902 UMF1; MFS transporter, UMF1 family
D AFA_08695 ptsP; phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D AFA_08690 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D AFA_08685 PTS sugar transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D AFA_16365 PTS sugar transporter subunit IIA K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D AFA_06190 aquaporin Z K06188 aqpZ; aquaporin Z
D AFA_12535 ammonia channel protein K03320 amt; ammonium transporter, Amt family
D AFA_15245 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_08100 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_08125 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_00220 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_12120 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_12550 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_16880 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_09430 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D AFA_17235 glutathione S-transferase K03599 sspA; stringent starvation protein A
D AFA_13040 hypothetical protein K19416 yccA; modulator of FtsH protease
D AFA_17215 mscL; large-conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D AFA_06585 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel
D AFA_06590 hypothetical protein K05802 mscK; potassium-dependent mechanosensitive channel
D AFA_04460 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel
D AFA_06180 mechanosensitive ion channel protein MscS K16052 ynaI; MscS family membrane protein
D AFA_10560 mechanosensitive ion channel protein MscS K16053 ybdG; miniconductance mechanosensitive channel
D AFA_03725 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D AFA_06625 mgtE; magnesium transporter K06213 mgtE; magnesium transporter
D AFA_14150 AmiS/UreI transporter K22112 amiS; putative amide transporter protein
D AFA_07640 transporter protein K22112 amiS; putative amide transporter protein
D AFA_05740 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AFA_09105 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D AFA_05745 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AFA_09110 flagellar motor protein K02557 motB; chemotaxis protein MotB
D AFA_07380 flagellar motor protein MotA K03561 exbB; biopolymer transport protein ExbB
D AFA_11170 biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB
D AFA_11165 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D AFA_07375 biopolymer transporter ExbD K03559 exbD; biopolymer transport protein ExbD
D AFA_14625 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D AFA_14630 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D AFA_04715 magnesium transporter K03284 corA; magnesium transporter
D AFA_10750 fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D AFA_14230 lipoprotein PlpD K03286 TC.OOP; OmpA-OmpF porin, OOP family
D AFA_12010 hypothetical protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D AFA_18170 fatty acid transporter K06076 fadL; long-chain fatty acid transport protein
D AFA_18485 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_16280 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_16285 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_16290 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_16295 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_16890 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D AFA_09200 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor
D AFA_02395 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor
D AFA_16150 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D AFA_17475 hypothetical protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D AFA_16160 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D AFA_16715 hypothetical protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D AFA_16900 hypothetical protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D AFA_10940 hypothetical protein K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D AFA_13840 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D AFA_12045 ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D AFA_08145 receptor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D AFA_12995 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_17595 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_00450 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_00765 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_16795 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_04405 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_08975 hypothetical protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_15170 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_01810 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_06410 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D AFA_06430 hypothetical protein K12340 tolC; outer membrane protein
D AFA_16200 hypothetical protein K12340 tolC; outer membrane protein
D AFA_18100 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system
D AFA_14130 hypothetical protein K18308 opmD; outer membrane protein, multidrug efflux system
D AFA_04420 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_14045 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_10410 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_17040 capsular biosynthesis protein K01991 wza; polysaccharide biosynthesis/export protein
D AFA_10185 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D AFA_11570 bamB; outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB
D AFA_04350 hypothetical protein K07287 bamC; outer membrane protein assembly factor BamC
D AFA_04975 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD
D AFA_13795 hypothetical protein K06186 bamE; outer membrane protein assembly factor BamE
D AFA_02565 hypothetical protein K07278 tamA; translocation and assembly module TamA
D AFA_02570 DUF490 domain-containing protein K09800 tamB; translocation and assembly module TamB
D AFA_14235 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D AFA_16350 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D AFA_16345 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC
D AFA_03810 LPS biosynthesis protein K04744 lptD; LPS-assembly protein
D AFA_12850 hypothetical protein K03643 lptE; LPS-assembly lipoprotein
D AFA_03205 magnesium/cobalt efflux protein K06189 corC; hemolysin (HlyC) family protein
D AFA_01855 CidA/LrgA family protein K06518 cidA; holin-like protein
D AFA_14760 GABA permease K11735 gabP; GABA permease
D AFA_06185 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter
D AFA_08290 ZIP family metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D AFA_14125 multidrug efflux protein K18307 mexI; multidrug efflux pump
D AFA_10415 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AFA_15195 multidrug transporter AcrB K18138 acrB; multidrug efflux pump
D AFA_16075 multidrug transporter subunit MdtC K07788 mdtB; multidrug efflux pump
D AFA_16070 multidrug transporter subunit MdtC K07789 mdtC; multidrug efflux pump
D AFA_06645 QacE family quaternary ammonium compound efflux SMR transporter K03297 emrE; small multidrug resistance pump
D AFA_02855 EamA family transporter K15268 eamA; O-acetylserine/cysteine efflux transporter
D AFA_08375 EamA family transporter K15269 pecM; probable blue pigment (indigoidine) exporter
D AFA_13050 rarD; protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD
D AFA_01555 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D AFA_02225 L-lactate permease K00427 lldP; L-lactate permease
D AFA_04885 lactate permease K03303 lutP; lactate permease
D AFA_14110 transporter K02168 betT; choline/glycine/proline betaine transport protein
D AFA_02495 calcium:proton antiporter K07300 chaA; Ca2+:H+ antiporter
D AFA_12425 actP; cation acetate symporter K14393 actP; cation/acetate symporter
D AFA_04310 actP; cation acetate symporter K14393 actP; cation/acetate symporter
D AFA_11065 cation acetate symporter K14393 actP; cation/acetate symporter
D AFA_15240 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein
D AFA_12395 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter
D AFA_16040 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D AFA_05475 sodium:glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D AFA_06635 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D AFA_09025 potassium transporter K03498 trkH; trk/ktr system potassium uptake protein
D AFA_09030 potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein
D AFA_04155 pyrimidine utilization transport protein G K09016 rutG; putative pyrimidine permease RutG
D AFA_09220 uracil permease K24206 uacT; uric acid transporter
D AFA_02680 purine permease K24206 uacT; uric acid transporter
D AFA_17055 permease K24206 uacT; uric acid transporter
D AFA_10620 guanine permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D AFA_06460 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D AFA_08275 benzoate transporter K05782 benE; benzoate membrane transport protein
D AFA_04385 benzoate transporter K05782 benE; benzoate membrane transport protein
D AFA_11455 hypothetical protein K05782 benE; benzoate membrane transport protein
D AFA_03590 chloride channel protein K03281 clcA; chloride channel protein, CIC family
D AFA_17090 chromate transporter K07240 chrA; chromate transporter
D AFA_17095 chromate transporter K07240 chrA; chromate transporter
D AFA_02180 chromate transporter K07240 chrA; chromate transporter
D AFA_04940 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family
D AFA_05695 sodium-independent anion transporter K03321 TC.SULP; sulfate permease, SulP family
D AFA_03105 C4-dicarboxylate ABC transporter K11688 dctP; C4-dicarboxylate-binding protein DctP
D AFA_03110 TRAP transporter permease DctQ K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D AFA_00345 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_04965 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_00600 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_00630 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_00790 permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_00905 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_10675 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_02100 C4-dicarboxylate ABC transporter K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_03115 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D AFA_17300 hypothetical protein K21394 yiaM; TRAP-type transport system small permease protein
D AFA_00340 hypothetical protein K21394 yiaM; TRAP-type transport system small permease protein
D AFA_04960 DctQ-like TRAP transporter subunit K21394 yiaM; TRAP-type transport system small permease protein
D AFA_00950 C4-dicarboxylate ABC transporter permease K21394 yiaM; TRAP-type transport system small permease protein
D AFA_10345 hypothetical protein K21394 yiaM; TRAP-type transport system small permease protein
D AFA_04955 C4-dicarboxylate ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D AFA_00620 C4-dicarboxylate ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D AFA_10350 TRAP transporter substrate-binding protein DctP K21395 yiaO; TRAP-type transport system periplasmic protein
D AFA_02090 ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D AFA_00800 ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D AFA_00595 C4-dicarboxylate ABC transporter K21395 yiaO; TRAP-type transport system periplasmic protein
D AFA_05160 Na/Pi cotransporter K03324 yjbB; phosphate:Na+ symporter
D AFA_05615 Na/Pi-cotransporter family protein K03324 yjbB; phosphate:Na+ symporter
D AFA_15415 arsenical efflux pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein
D AFA_07905 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter
D AFA_07635 arsenic resistance protein K03325 ACR3; arsenite transporter
D AFA_11115 monovalent cation/H+ antiporter subunit A K05559 phaA; multicomponent K+:H+ antiporter subunit A
D AFA_11120 Na+/H+ antiporter subunit C K05560 phaC; multicomponent K+:H+ antiporter subunit C
D AFA_11125 monovalent cation/H+ antiporter subunit D K05561 phaD; multicomponent K+:H+ antiporter subunit D
D AFA_11130 Na+/H+ antiporter subunit E K05562 phaE; multicomponent K+:H+ antiporter subunit E
D AFA_11135 K+/H+ antiporter subunit F K05563 phaF; multicomponent K+:H+ antiporter subunit F
D AFA_11140 cation:proton antiporter K05564 phaG; multicomponent K+:H+ antiporter subunit G
D AFA_07345 mviN; murein biosynthesis integral membrane protein MurJ K03980 murJ; putative peptidoglycan lipid II flippase
D AFA_02725 hypothetical protein K03980 murJ; putative peptidoglycan lipid II flippase
D AFA_03970 hypothetical protein K13936 mdcF; malonate transporter and related proteins
D AFA_11150 trkD; potassium transporter Kup K03549 kup; KUP system potassium uptake protein
D AFA_12100 amino acid transporter K06895 lysE; L-lysine exporter family protein LysE/ArgO
D AFA_00835 threonine transporter RhtB K05834 rhtB; homoserine/homoserine lactone efflux protein
D AFA_08590 lysine transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein
D AFA_12400 lysine transporter LysE K05834 rhtB; homoserine/homoserine lactone efflux protein
D AFA_01900 lysine transporter LysE K05835 rhtC; threonine efflux protein
D AFA_18340 lysine transporter LysE K05835 rhtC; threonine efflux protein
D AFA_15400 lysine transporter LysE K05835 rhtC; threonine efflux protein
D AFA_14705 leucine efflux protein LeuE K11250 leuE; leucine efflux protein
D AFA_10510 AzlC-like protein K26605 azlC; branched chain amino acid efflux pump
D AFA_14395 hypothetical protein K26605 azlC; branched chain amino acid efflux pump
D AFA_14390 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D AFA_10505 hypothetical protein K26606 azlD; branched chain amino acid efflux pump
D AFA_14575 hypothetical protein K07793 tctA; putative tricarboxylic transport membrane protein
D AFA_16750 tripartite tricarboxylate transporter TctA K07793 tctA; putative tricarboxylic transport membrane protein
D AFA_16755 hypothetical protein K07794 tctB; putative tricarboxylic transport membrane protein
D AFA_14570 tricarboxylate transporter K07794 tctB; putative tricarboxylic transport membrane protein
D AFA_16760 tricarboxylic transporter K07795 tctC; putative tricarboxylic transport membrane protein
D AFA_00210 ABC transporter substrate-binding protein K07795 tctC; putative tricarboxylic transport membrane protein
D AFA_06455 hypothetical protein K15547 mdtO; multidrug resistance protein MdtO
D AFA_14060 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D AFA_07480 hypothetical protein K22736 VIT; vacuolar iron transporter family protein
D AFA_10240 antibiotic resistance protein K05595 marC; multiple antibiotic resistance protein
D AFA_06435 stress protection protein MarC K05595 marC; multiple antibiotic resistance protein
D AFA_03665 ftsW; putative lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D AFA_12480 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D AFA_11175 siderophore-mediated iron transport protein K03832 tonB; periplasmic protein TonB
D AFA_15690 hypothetical protein K03832 tonB; periplasmic protein TonB
D AFA_14645 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D AFA_14635 tolA; protein TolA K03646 tolA; colicin import membrane protein
D AFA_14640 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D AFA_04500 mdcA; malonate decarboxylase subunit alpha K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D AFA_04495 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D AFA_02930 cytochrome C biogenesis protein K06196 ccdA; cytochrome c-type biogenesis protein
D AFA_09185 tetrathionate reductase subunit A K08357 ttrA; tetrathionate reductase subunit A
D AFA_09195 tetrathionate reductase subunit B K08358 ttrB; tetrathionate reductase subunit B
D AFA_09190 tetrathionate reductase K08359 ttrC; tetrathionate reductase subunit C
D AFA_06450 multidrug transporter subunit MdtN K15549 mdtN; membrane fusion protein, multidrug efflux system
D AFA_18085 secretion protein HylD K12542 lapC; membrane fusion protein, adhesin transport system
D AFA_14120 efflux transporter periplasmic adaptor subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D AFA_10420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_15200 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_16080 efflux transporter periplasmic adaptor subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D AFA_04410 efflux transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D AFA_02910 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF
D AFA_11650 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D AFA_12755 scaffolding protein K07274 mipA; MipA family protein
D AFA_08110 copper resistance protein CopC K14166 ycnJ; copper transport protein
C 02044 Secretion system [BR:afq02044]
D AFA_06430 hypothetical protein K12340 tolC; outer membrane protein
D AFA_16200 hypothetical protein K12340 tolC; outer membrane protein
D AFA_18090 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D AFA_18085 secretion protein HylD K12542 lapC; membrane fusion protein, adhesin transport system
D AFA_18100 hypothetical protein K12543 lapE; outer membrane protein, adhesin transport system
D AFA_14260 gspD; type II secretion system protein GspD K02453 gspD; general secretion pathway protein D
D AFA_14255 gspE; type II secretion system protein GspE K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D AFA_14250 gspF; type II secretion system protein GspF K02455 gspF; general secretion pathway protein F
D AFA_14300 gspG; type II secretion system protein GspG K02456 gspG; general secretion pathway protein G
D AFA_14295 gspH; type II secretion system protein GspH K02457 gspH; general secretion pathway protein H
D AFA_14290 gspI; type II secretion system protein GspI K02458 gspI; general secretion pathway protein I
D AFA_14285 HxcW pseudopilin K02459 gspJ; general secretion pathway protein J
D AFA_14280 general secretion pathway protein GspK K02460 gspK; general secretion pathway protein K
D AFA_14270 hypothetical protein K02462 gspM; general secretion pathway protein M
D AFA_14265 general secretion pathway protein GspN K02463 gspN; general secretion pathway protein N
D AFA_11355 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AFA_10800 hypothetical protein K08086 fimV; pilus assembly protein FimV
D AFA_13710 pilus assembly protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AFA_13695 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AFA_10915 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AFA_13690 type II secretion system protein K02280 cpaC; pilus assembly protein CpaC
D AFA_10910 secretion protein K02280 cpaC; pilus assembly protein CpaC
D AFA_13685 pilus assembly protein CpaF K02282 cpaE; pilus assembly protein CpaE
D AFA_13680 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AFA_10905 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AFA_10900 type II secretion protein F K12510 tadB; tight adherence protein B
D AFA_13675 hypothetical protein K12510 tadB; tight adherence protein B
D AFA_10895 type II secretion system protein F K12511 tadC; tight adherence protein C
D AFA_13670 type II secretion protein F K12511 tadC; tight adherence protein C
D AFA_13665 pilus assembly protein K27079 tadD; tight adherence protein D
D AFA_13655 hypothetical protein K27080 tadG; tight adherence protein G
D AFA_13715 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D AFA_15625 hypothetical protein K02221 yggT; YggT family protein
D AFA_11945 hypothetical protein K02237 comEA; competence protein ComEA
D AFA_07810 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D AFA_05790 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AFA_05785 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AFA_05975 flagellar biosynthesis protein FlhB K04061 flhB2; flagellar biosynthesis protein
D AFA_05965 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AFA_05955 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D AFA_05950 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AFA_05925 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AFA_05920 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AFA_05915 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AFA_05910 fliQ; flagellar export apparatus protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AFA_05905 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AFA_12145 type VI secretion protein K03194 virB1; type IV secretion system protein VirB1
D AFA_12160 type VI secretion protein K03198 virB3; type IV secretion system protein VirB3
D AFA_12165 type VI secretion protein K03199 virB4; type IV secretion system protein VirB4 [EC:7.4.2.8]
D AFA_12175 type VI secretion protein K03200 virB5; type IV secretion system protein VirB5
D AFA_12190 conjugal transfer protein TraJ K03203 virB8; type IV secretion system protein VirB8
D AFA_12195 hypothetical protein K03204 virB9; type IV secretion system protein VirB9
D AFA_12200 type VI secretion protein K03195 virB10; type IV secretion system protein VirB10
D AFA_12205 virB11; P-type DNA transfer ATPase VirB11 K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D AFA_09885 cobyrinic acid a,c-diamide synthase K12055 K12055; chromosome partitioning related protein ParA
D AFA_09540 metal-dependent phosphohydrolase K12070 traI; conjugal transfer pilus assembly protein TraI
D AFA_09570 traD; conjugative coupling factor TraD, PFGI-1 class K12071 traD; conjugal transfer pilus assembly protein TraD
D AFA_09705 disulfide isomerase K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AFA_01395 disulfide bond formation protein DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D AFA_06345 conjugal transfer protein TrbF K20531 trbF; type IV secretion system protein TrbF
D AFA_06350 trbG; P-type conjugative transfer protein TrbG K20532 trbG; type IV secretion system protein TrbG
D AFA_06355 conjugal transfer protein TrbI K20533 trbI; type IV secretion system protein TrbI
D AFA_07875 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D AFA_06330 trbJ; P-type conjugative transfer protein TrbJ K20266 trbJ; type IV secretion system protein TrbJ
D AFA_07885 trbL; P-type conjugative transfer protein TrbL K07344 trbL; type IV secretion system protein TrbL
D AFA_18485 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_16280 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_16285 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_16290 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_16295 autotransporter outer membrane beta-barrel domain-containing protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D AFA_09905 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D AFA_09910 DotU family type IV / VI secretion system protein K11892 impK; type VI secretion system protein ImpK
D AFA_09915 type VI secretion protein K11893 impJ; type VI secretion system protein ImpJ
D AFA_09955 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D AFA_09960 vasA; type VI secretion system ImpG/VasA family protein K11896 impG; type VI secretion system protein ImpG
D AFA_09975 type VI secretion protein K11900 impC; type VI secretion system protein ImpC
D AFA_09980 type VI secretion system-associated protein K11901 impB; type VI secretion system protein ImpB
D AFA_09970 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp
D AFA_09945 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D AFA_09965 type VI secretion protein K11905 K11905; type VI secretion system protein
D AFA_09950 clpV; ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG
D AFA_09985 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D AFA_06045 serine/threonine protein kinase K11912 ppkA; serine/threonine-protein kinase PpkA [EC:2.7.11.1]
D AFA_08825 hypothetical protein K04337 csgE; curli production assembly/transport component CsgE
D AFA_08820 curli assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF
D AFA_08815 curli production assembly/transport protein CsgG K06214 csgG; curli production assembly/transport component CsgG
D AFA_03715 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D AFA_16450 protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D AFA_03240 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD
D AFA_18385 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D AFA_03235 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF
D AFA_13445 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D AFA_18010 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D AFA_02425 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D AFA_14900 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D AFA_03245 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D AFA_18600 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D AFA_17190 twin-arginine translocase subunit TatA K03116 tatA; sec-independent protein translocase protein TatA
D AFA_17195 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB
D AFA_17200 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:afq02042]
D AFA_08425 hemolysin III K11068 hlyIII; hemolysin III
D AFA_14215 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_15345 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D AFA_18110 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 02022 Two-component system [BR:afq02022]
D AFA_16240 phoR; phosphate regulon sensor histidine kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AFA_12465 histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D AFA_16235 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D AFA_13325 two-component sensor histidine kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D AFA_13320 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D AFA_06375 two-component sensor histidine kinase K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3]
D AFA_06380 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB
D AFA_07315 sensor histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D AFA_07320 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D AFA_14600 sensor histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AFA_16765 histidine kinase K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D AFA_14605 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D AFA_16770 DNA-binding response regulator K07774 tctD; two-component system, OmpR family, response regulator TctD
D AFA_15435 histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D AFA_04240 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AFA_11025 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AFA_11160 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AFA_15430 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D AFA_16490 histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D AFA_16485 two-component system response regulator K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D AFA_15235 C4-dicarboxylate transporter K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D AFA_15230 Fis family transcriptional regulator K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D AFA_05750 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AFA_05775 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AFA_05770 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AFA_03100 hypothetical protein K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3]
D AFA_03095 DNA-binding response regulator K11712 dctR; two-component system, LuxR family, response regulator DctR
D AFA_09155 hypothetical protein K17060 aauS; two-component system, sensor histidine kinase AauS [EC:2.7.13.3]
D AFA_09160 Fis family transcriptional regulator K17061 aauR; two-component system, response regulator AauR
C 02035 Bacterial motility proteins [BR:afq02035]
D AFA_05750 chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D AFA_05755 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D AFA_05765 chemotaxis protein CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D AFA_05770 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D AFA_05775 two-component system response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D AFA_05780 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D AFA_01405 chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D AFA_05760 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AFA_05880 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AFA_05890 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D AFA_06090 chemotaxis protein K03776 aer; aerotaxis receptor
D AFA_05955 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D AFA_05950 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D AFA_05945 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D AFA_05920 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D AFA_05915 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D AFA_05910 fliQ; flagellar export apparatus protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D AFA_05905 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D AFA_05790 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D AFA_05785 flagellar biosynthesis protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D AFA_09100 hypothetical protein K03516 flhE; flagellar protein FlhE
D AFA_05960 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D AFA_05930 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D AFA_05925 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D AFA_05965 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D AFA_05860 flagellar biosynthesis protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D AFA_05820 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D AFA_05855 flagellar basal body L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D AFA_05935 flagellar protein FliL K02415 fliL; flagellar protein FliL
D AFA_05970 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D AFA_05940 flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK
D AFA_05825 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D AFA_05830 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D AFA_05835 flgD; flagellar basal body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D AFA_05845 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D AFA_05850 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D AFA_05865 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D AFA_05840 flagellar biosynthesis protein FlgE K02390 flgE; flagellar hook protein FlgE
D AFA_05870 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D AFA_05875 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D AFA_05810 flagellar synthesis chaperone K02399 flgN; flagellar biosynthesis protein FlgN
D AFA_06015 flagellin FliC K02406 fliC; flagellin
D AFA_05995 flagellar hook-associated protein 2 K02407 fliD; flagellar hook-associated protein 2
D AFA_05990 fliS; flagellar export chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D AFA_05985 flagellar protein FliT K02423 fliT; flagellar protein FliT
D AFA_05730 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD
D AFA_05735 transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D AFA_06005 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA
D AFA_05740 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D AFA_09105 chemotaxis protein MotA K02556 motA; chemotaxis protein MotA
D AFA_05745 motB; flagellar motor protein MotB K02557 motB; chemotaxis protein MotB
D AFA_09110 flagellar motor protein K02557 motB; chemotaxis protein MotB
D AFA_05815 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D AFA_06000 hypothetical protein K06603 flaG; flagellar protein FlaG
D AFA_05795 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D AFA_11355 hypothetical protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D AFA_13715 Flp family type IVb pilin K02651 flp; pilus assembly protein Flp/PilA
D AFA_13710 pilus assembly protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D AFA_13695 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AFA_10915 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D AFA_13690 type II secretion system protein K02280 cpaC; pilus assembly protein CpaC
D AFA_10910 secretion protein K02280 cpaC; pilus assembly protein CpaC
D AFA_13685 pilus assembly protein CpaF K02282 cpaE; pilus assembly protein CpaE
D AFA_13680 pilus assembly protein CpaF K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D AFA_10905 hypothetical protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:afq04812]
D AFA_15885 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AFA_03695 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AFA_03690 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D AFA_03570 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D AFA_03565 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D AFA_03560 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D AFA_18420 chromosome partitioning protein K03496 parA; chromosome partitioning protein
D AFA_12295 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D AFA_18415 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:afq04147]
D AFA_02390 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG
D AFA_12895 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D AFA_03390 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D AFA_03395 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D AFA_02640 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D AFA_14830 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D AFA_13760 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK
D AFA_16950 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D AFA_07835 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D AFA_18300 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AFA_18395 tuf; elongation factor Tu K02358 tuf; elongation factor Tu
D AFA_17185 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D AFA_05225 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D AFA_10765 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D AFA_03740 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_01085 long-chain fatty acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_18185 long-chain-fatty-acid--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D AFA_14015 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_00680 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10445 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_10450 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_18160 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D AFA_02025 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D AFA_07355 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D AFA_16300 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D AFA_10565 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D AFA_07255 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D AFA_02760 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D AFA_12680 fructose-bisphosphatase class I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D AFA_05715 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D AFA_17945 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D AFA_14315 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D AFA_02985 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D AFA_14445 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D AFA_11880 peptidase M48 K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D AFA_04905 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10275 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_10330 dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D AFA_11920 electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D AFA_01065 glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D AFA_13450 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D AFA_16435 gpmA; phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D AFA_08465 lipocalin K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:afq02048]
D AFA_12310 restriction endonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D AFA_02165 deoxyribonuclease HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D AFA_12305 restriction endonuclease subunit S K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AFA_02160 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D AFA_12300 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AFA_02155 type I restriction-modification system subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D AFA_06305 DNA (cytosine-5-)-methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D AFA_02175 restriction endonuclease K07448 mrr; restriction system protein
D AFA_07490 restriction endonuclease K07448 mrr; restriction system protein
D AFA_09680 growth inhibitor PemK K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D AFA_07900 hypothetical protein K18842 chpS; antitoxin ChpS
D AFA_00470 cytotoxic translational repressor of toxin-antitoxin stability system K06218 relE; mRNA interferase RelE/StbE
D AFA_06010 antitoxin K18923 stbD; antitoxin StbD
D AFA_17460 protein kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AFA_05800 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D AFA_05805 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D AFA_16960 PIN domain-containing protein K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
D AFA_16955 hypothetical protein K18829 mvpT; antitoxin VapB
D AFA_07870 stabilization protein K21495 fitA; antitoxin FitA
D AFA_03695 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D AFA_15885 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D AFA_11690 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D AFA_11695 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D AFA_15595 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D AFA_04870 succinate dehydrogenase assembly factor 2 K09159 cptB; antitoxin CptB
D AFA_07720 IscS subfamily cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:afq01504]
D AFA_17715 chloramphenicol efflux MFS transporter K18552 cmlA; MFS transporter, DHA1 family, chloramphenicol/florfenicol resistance protein
D AFA_04920 antibiotic acetyltransferase K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28]
D AFA_07950 folP; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15]
D AFA_08715 hypothetical protein K18555 qnr; fluoroquinolone resistance protein
D AFA_17400 serine hydrolase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AFA_11715 class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D AFA_10420 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_15200 efflux transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D AFA_10415 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump
D AFA_15195 multidrug transporter AcrB K18138 acrB; multidrug efflux pump
D AFA_04420 transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_14045 RND transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_10410 multidrug transporter K18139 oprM; outer membrane protein, multidrug efflux system
D AFA_10335 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D AFA_06430 hypothetical protein K12340 tolC; outer membrane protein
D AFA_16200 hypothetical protein K12340 tolC; outer membrane protein
D AFA_02490 LysR family transcriptional regulator K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:afq03100]
D AFA_03175 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_01275 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_03190 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_05455 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_14515 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D AFA_04670 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_04665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_04020 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_04300 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_01800 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D AFA_05625 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AFA_05635 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D AFA_03165 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AFA_03180 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D AFA_13820 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D AFA_02805 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D AFA_03170 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AFA_03185 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D AFA_13815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AFA_18405 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AFA_02455 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AFA_13825 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D AFA_04330 tRNA-His K14226 tRNA-His; tRNA His
D AFA_01270 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AFA_05450 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AFA_14520 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D AFA_02150 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_13465 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_07660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_11310 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_11325 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_11345 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_13440 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D AFA_12525 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AFA_03760 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D AFA_05075 tRNA-Met K14230 tRNA-Met; tRNA Met
D AFA_05080 tRNA-Met K14230 tRNA-Met; tRNA Met
D AFA_06120 tRNA-Met K14230 tRNA-Met; tRNA Met
D AFA_07020 tRNA-Met K14230 tRNA-Met; tRNA Met
D AFA_16695 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D AFA_04275 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AFA_04270 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AFA_08850 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AFA_08945 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D AFA_13520 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AFA_04580 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AFA_15475 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AFA_13460 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D AFA_17260 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AFA_05600 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AFA_18400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D AFA_18390 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D AFA_18410 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D AFA_08420 tRNA-Val K14237 tRNA-Val; tRNA Val
D AFA_11225 tRNA-Val K14237 tRNA-Val; tRNA Val
D AFA_15185 tRNA-Val K14237 tRNA-Val; tRNA Val
D AFA_16865 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D AFA_01265 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D AFA_04090 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA
D AFA_03625 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA
D AFA_12390 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D AFA_09445 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69]
D AFA_07750 short-chain dehydrogenase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D AFA_17365 oxidoreductase K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346]
D AFA_09460 oxidoreductase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D AFA_15090 picA3; Picolinic acid dehydrogenase medium subunit K03518 coxS; aerobic carbon-monoxide dehydrogenase small subunit [EC:1.2.5.3]
D AFA_15095 picA2; Picolinic acid dehydrogenase small subunit K03519 coxM; aerobic carbon-monoxide dehydrogenase medium subunit [EC:1.2.5.3]
D AFA_15100 picA1; Picolinic acid dehydrogenase large subunit K03520 coxL; aerobic carbon-monoxide dehydrogenase large subunit [EC:1.2.5.3]
D AFA_00250 indolepyruvate ferredoxin oxidoreductase K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D AFA_00255 indolepyruvate oxidoreductase subunit B K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D AFA_04285 indolepyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D AFA_15615 pyruvate ferredoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D AFA_17825 aldehyde dehydrogenase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D AFA_15460 pyrroloquinoline quinone biosynthesis protein PqqC K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D AFA_01515 glycerol-3-phosphate dehydrogenase K04940 odh; opine dehydrogenase [EC:1.5.1.28]
D AFA_12950 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D AFA_12685 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AFA_13455 NAD(P)H-quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D AFA_12495 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D AFA_14725 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D AFA_06400 cytochrome C K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D AFA_14545 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D AFA_13270 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D AFA_17730 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D AFA_10050 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D AFA_11415 glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D AFA_04680 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7]
D AFA_13170 mononuclear molybdenum enzyme YedY K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D AFA_08065 cytochrome B K12262 cybB; superoxide oxidase [EC:1.10.3.17]
D AFA_02980 cytochrome C biogenesis protein CcsA K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D AFA_06155 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D AFA_05240 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AFA_11910 peroxidase K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D AFA_14730 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D AFA_14805 hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AFA_17430 quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D AFA_15275 cysteine dioxygenase K24700 mdo; 3-mercaptopropionate dioxygenase [EC:1.13.11.91]
D AFA_02400 Fe2+-dependent dioxygenase K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D AFA_00505 5,10-methylene tetrahydromethanopterin reductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D AFA_00515 N5,N10-methylene tetrahydromethanopterin reductase K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D AFA_05275 zeta-carotene desaturase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1]
D AFA_09345 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D AFA_10045 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D AFA_15420 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D AFA_07910 protein-tyrosine-phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D AFA_16195 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D AFA_10600 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D AFA_12825 SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D AFA_16010 SAM-dependent methyltransferase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D AFA_03200 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D AFA_01610 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-]
D AFA_11395 GNAT family N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-]
D AFA_14345 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D AFA_14350 arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D AFA_05400 lipopolysaccharide core biosynthesis glycosyl transferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D AFA_04475 triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D AFA_00565 modD; ModD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D AFA_09065 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D AFA_14550 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D AFA_03940 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D AFA_16945 thiamine biosynthesis protein ApbE K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D AFA_10140 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D AFA_09535 pap; polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D AFA_11725 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D AFA_18445 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65]
D AFA_04480 mdcG; malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D AFA_10855 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D AFA_00685 bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D AFA_16370 HPr kinase/phosphorylase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D AFA_10375 carnitine dehydratase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D AFA_08180 carnitine dehydratase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19]
D AFA_13600 carboxylesterase K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-]
D AFA_12945 thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AFA_14620 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D AFA_17760 protein tyrosine phosphatase K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D AFA_07820 phosphatase K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D AFA_06615 two-component system response regulator K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D AFA_10070 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AFA_07805 DNAase K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D AFA_05025 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D AFA_06985 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D AFA_07155 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D AFA_03755 glycosyl hydrolase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D AFA_08200 hypothetical protein K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180]
D AFA_08930 N-carbamoyl-D-amino-acid hydrolase K01459 E3.5.1.77; N-carbamoyl-D-amino-acid hydrolase [EC:3.5.1.77]
D AFA_17410 N-acyl-D-glutamate deacylase K01461 E3.5.1.82; N-acyl-D-glutamate deacylase [EC:3.5.1.82]
D AFA_01140 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D AFA_17395 hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D AFA_11435 hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D AFA_09215 8-oxoguanine deaminase K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D AFA_04605 amidohydrolase K20766 E3.5.5.5; arylacetonitrilase [EC:3.5.5.5]
D AFA_17350 enamine deaminase RidA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AFA_08455 hypothetical protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AFA_01860 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AFA_01865 enamine deaminase RidA K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D AFA_14895 inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25]
D AFA_13150 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D AFA_00150 arylmalonate decarboxylase K06033 E4.1.1.76; arylmalonate decarboxylase [EC:4.1.1.76]
D AFA_04490 biotin-independent malonate decarboxylase subunit beta K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D AFA_04485 mdcE; biotin-independent malonate decarboxylase subunit gamma K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D AFA_15070 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D AFA_08900 diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15]
D AFA_14460 serine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D AFA_17315 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D AFA_00970 ATP-dependent acyl-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48]
D AFA_15675 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D AFA_06570 hypothetical protein K27292 avaA6; 3-aminoavenalumate diazotase [EC:6.7.1.2]
D AFA_13230 ferredoxin K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D AFA_05690 heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D AFA_15580 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
C 99982 Energy metabolism
D AFA_03035 sulfurtransferase FdhD K02379 fdhD; FdhD protein
D AFA_12035 4Fe-4S ferredoxin K05524 fdxA; ferredoxin
D AFA_13220 ferredoxin K05524 fdxA; ferredoxin
D AFA_03615 (Fe-S)-binding protein K11107 yfaE; ferredoxin
D AFA_07725 iron-binding protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D AFA_08795 iron-sulfur cluster assembly scaffold protein K04488 iscU; nitrogen fixation protein NifU and related proteins
D AFA_09175 tcuB; tricarballylate utilization protein TcuB K13795 citB; citrate/tricarballylate utilization protein
D AFA_09170 FAD-binding dehydrogenase K13796 cobZ; tricarballylate dehydrogenase
D AFA_11925 electron transporter RnfB K03521 fixA; electron transfer flavoprotein beta subunit
D AFA_11240 cytochrome c class I NirC K19344 nirC; cytochrome c55X
D AFA_11245 protein nirF K19345 nirF; protein NirF
C 99983 Lipid metabolism
D AFA_07995 acyl-CoA dehydrogenase K09456 aidB; putative acyl-CoA dehydrogenase
D AFA_04720 protein AidB K09456 aidB; putative acyl-CoA dehydrogenase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D AFA_08365 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D AFA_01070 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein
D AFA_13635 GNAT family N-acetyltransferase K22479 argA; N-acetyltransferase
C 99986 Glycan metabolism
D AFA_11965 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D AFA_11960 lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D AFA_10965 heme biosynthesis protein HemY K02498 hemY; HemY protein
D AFA_11265 nirJ; heme d1 biosynthesis radical SAM protein NirJ K24868 nirJ; heme d1 biosynthesis protein
D AFA_16215 ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein
D AFA_12515 ABC transporter K03688 ubiB; ubiquinone biosynthesis protein
D AFA_16220 hypothetical protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D AFA_08705 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D AFA_01320 sterol-binding protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
C 99988 Secondary metabolism
D AFA_10060 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D AFA_02475 hypothetical protein K15977 K15977; putative oxidoreductase
D AFA_04250 GntR family transcriptional regulator K15977 K15977; putative oxidoreductase
D AFA_15915 LuxR family transcriptional regulator K15977 K15977; putative oxidoreductase
D AFA_15565 carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D AFA_15575 GNAT family N-acetyltransferase K09181 yfiQ; acetyltransferase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D AFA_07410 cold-shock protein K03704 cspA; cold shock protein
D AFA_01200 cold-shock protein K03704 cspA; cold shock protein
D AFA_08860 cold-shock protein K03704 cspA; cold shock protein
D AFA_12365 hypothetical protein K03704 cspA; cold shock protein
D AFA_06255 cold-shock protein K03704 cspA; cold shock protein
D AFA_11210 cold-shock protein K03704 cspA; cold shock protein
D AFA_12530 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2
D AFA_04930 RNA-binding transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
D AFA_14035 multidrug ABC transporter ATP-binding protein K13926 rbbA; ribosome-dependent ATPase
C 99975 Protein processing
D AFA_07415 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D AFA_07670 trigger factor K03545 tig; trigger factor
D AFA_13165 sulfoxide reductase heme-binding subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D AFA_16850 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D AFA_10120 SsrA-binding protein K03664 smpB; SsrA-binding protein
D AFA_08720 ATP-dependent protease K07391 comM; magnesium chelatase family protein
D AFA_02865 DsbA family protein K07396 K07396; putative protein-disulfide isomerase
D AFA_02605 peroxiredoxin K07397 yhfA; putative redox protein
D AFA_17930 cytochrome C biogenesis protein ResB K07399 resB; cytochrome c biogenesis protein
D AFA_11485 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D AFA_15075 cytochrome oxidase I K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D AFA_12790 hypothetical protein K03630 radC; DNA repair protein RadC
D AFA_09765 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D AFA_01005 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D AFA_16390 YraN family protein K07460 yraN; putative endonuclease
D AFA_01135 dprA; DNA-protecting protein DprA K04096 smf; DNA processing protein
D AFA_13545 recombination factor protein RarA K07478 ycaJ; putative ATPase
D AFA_07860 hypothetical protein K07505 repA; regulatory protein RepA
D AFA_12315 ISL3 family transposase K07485 K07485; transposase
D AFA_08870 IS3 family transposase K07497 K07497; putative transposase
D AFA_07655 IS3 family transposase K07497 K07497; putative transposase
D AFA_12385 site-specific integrase K14059 int; integrase
C 99979 Viral proteins
C 99998 Others
D AFA_04100 YbaB/EbfC family nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D AFA_13435 porin K03285 TC.GBP; general bacterial porin, GBP family
D AFA_05630 porin K03285 TC.GBP; general bacterial porin, GBP family
D AFA_16020 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D AFA_09115 sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D AFA_07775 sodium transporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family
D AFA_03920 allantoin permease K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
C 99978 Cell growth
D AFA_13275 septation protein A K06190 ispZ; intracellular septation protein
D AFA_16255 carboxylase K06350 kipA; antagonist of KipI
D AFA_16250 allophanate hydrolase K06351 kipI; inhibitor of KinA
D AFA_16430 peptidase K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D AFA_12590 carbon starvation protein A K06200 cstA; carbon starvation protein
D AFA_05120 typA; translational GTPase TypA K06207 typA; GTP-binding protein
D AFA_14310 hypothetical protein K07168 K07168; CBS domain-containing membrane protein
D AFA_03215 phosphate starvation-inducible protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D AFA_05235 ribonuclease K07175 phoH2; PhoH-like ATPase
D AFA_05895 cyclic nucleotide-binding protein K07182 K07182; CBS domain-containing protein
D AFA_10740 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D AFA_13550 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D AFA_02795 lipoprotein localization factor LolB K02494 lolB; outer membrane lipoprotein LolB
D AFA_17115 hypothetical protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D AFA_15635 hypothetical protein K06077 slyB; outer membrane lipoprotein SlyB
D AFA_10180 outer membrane protein chaperone K06142 hlpA; outer membrane protein
D AFA_10595 peptidase K06194 nlpD; lipoprotein NlpD
D AFA_13245 hypothetical protein K07275 ompW; outer membrane protein
D AFA_08135 hypothetical protein K07280 K07280; outer membrane protein
D AFA_14925 AsmA family protein K07289 asmA; AsmA protein
D AFA_08635 hypothetical protein K07340 ybbJ; inner membrane protein
D AFA_14040 hemolysin D K01993 ABC-2.TX; HlyD family secretion protein
D AFA_12350 efflux RND transporter periplasmic adaptor subunit K02005 ABC.CD.TX; HlyD family secretion protein
D AFA_03550 hypothetical protein K04062 osmB; osmotically inducible lipoprotein OsmB
D AFA_02905 cytochrome c biogenesis protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D AFA_02920 cytochrome C biogenesis protein cycl K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D AFA_02925 ccmI; c-type cytochrome biogenesis protein CcmI K02200 ccmH; cytochrome c-type biogenesis protein CcmH
D AFA_11590 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D AFA_05345 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D AFA_00815 hypothetical protein K02192 bfd; bacterioferritin-associated ferredoxin
D AFA_17955 divalent-cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein
D AFA_01380 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein
D AFA_16925 carbohydrate-binding protein K07218 nosD; nitrous oxidase accessory protein
D AFA_17450 FAD-dependent oxidoreductase K07222 K07222; putative flavoprotein involved in K+ transport
D AFA_08340 NnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D AFA_16940 copper resistance protein CopZ K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D AFA_10260 colicin V synthesis protein K03558 cvpA; membrane protein required for colicin V production
D AFA_07430 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B
D AFA_09310 GNAT family N-acetyltransferase K02348 elaA; ElaA protein
D AFA_04615 phenylacetic acid degradation protein PaaY K02617 paaY; phenylacetic acid degradation protein
D AFA_17445 transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein
D AFA_08865 hypothetical protein K04065 osmY; hyperosmotically inducible periplasmic protein
D AFA_09830 DEAD/DEAH box helicase K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D AFA_02995 preprotein translocase subunit TatC K06886 glbN; hemoglobin
D AFA_16825 globin K06886 glbN; hemoglobin
D AFA_05645 hypothetical protein K07001 K07001; NTE family protein
D AFA_03370 Patatin K07001 K07001; NTE family protein
D AFA_16415 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D AFA_15525 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein
D AFA_08775 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D AFA_08785 sufD; Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D AFA_15255 hypothetical protein K07038 K07038; inner membrane protein
D AFA_10865 hypothetical protein K07058 K07058; membrane protein
D AFA_08025 hypothetical protein K02426 sufE; cysteine desulfuration protein SufE
D AFA_15250 hypothetical protein K07146 K07146; UPF0176 protein
D AFA_02645 heme-degrading domain-containing protein K11477 glcG; glc operon protein GlcG
D AFA_07915 arsH; FMN reductase K11811 arsH; arsenical resistance protein ArsH
D AFA_15425 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH
D AFA_14415 hypothetical protein K02351 K02351; putative membrane protein
D AFA_00845 hypothetical protein K03744 lemA; LemA protein
D AFA_00660 hypothetical protein K03747 smg; Smg protein
D AFA_10265 SPOR domain-containing protein K03749 dedD; DedD protein
D AFA_03935 hypothetical protein K03975 dedA; membrane-associated protein
D AFA_07425 paraquat-inducible membrane protein A K03808 pqiA; paraquat-inducible protein A
D AFA_02030 hypothetical protein K08972 K08972; putative membrane protein
D AFA_06660 hypothetical protein K09858 K09858; SEC-C motif domain protein
D AFA_06135 alkylphosphonate utilization protein K06193 phnA; protein PhnA
C 99997 Function unknown
D AFA_00980 hypothetical protein K06867 K06867; uncharacterized protein
D AFA_10065 ankryin K06867 K06867; uncharacterized protein
D AFA_09485 hypothetical protein K06867 K06867; uncharacterized protein
D AFA_00850 dehydrogenase K06872 K06872; uncharacterized protein
D AFA_16050 AAA family ATPase K06923 K06923; uncharacterized protein
D AFA_08415 zinc/iron-chelating domain-containing protein K06940 K06940; uncharacterized protein
D AFA_05405 zinc/iron-chelating domain-containing protein K06940 K06940; uncharacterized protein
D AFA_12375 hypothetical protein K06946 K06946; uncharacterized protein
D AFA_02320 phosphohydrolase K06950 K06950; uncharacterized protein
D AFA_02415 hypothetical protein K06950 K06950; uncharacterized protein
D AFA_16000 NAD/FAD-binding protein K06954 K06954; uncharacterized protein
D AFA_04805 GNAT family N-acetyltransferase K06975 K06975; uncharacterized protein
D AFA_15570 peptidase S15 K06978 K06978; uncharacterized protein
D AFA_16245 glyoxalase K06991 K06991; uncharacterized protein
D AFA_15680 esterase K07000 K07000; uncharacterized protein
D AFA_13860 hypothetical protein K07017 K07017; uncharacterized protein
D AFA_01220 alpha/beta hydrolase K07018 K07018; uncharacterized protein
D AFA_14405 alpha/beta hydrolase K07019 K07019; uncharacterized protein
D AFA_00530 amidohydrolase K07045 K07045; uncharacterized protein
D AFA_12520 hypothetical protein K07054 K07054; uncharacterized protein
D AFA_00320 short-chain dehydrogenase K07068 K07068; uncharacterized protein
D AFA_16035 TIGR01777 family protein K07071 K07071; uncharacterized protein
D AFA_01025 C4-dicarboxylate ABC transporter substrate-binding protein K07080 K07080; uncharacterized protein
D AFA_08605 permease K07090 K07090; uncharacterized protein
D AFA_00555 hypothetical protein K07090 K07090; uncharacterized protein
D AFA_05305 hypothetical protein K07090 K07090; uncharacterized protein
D AFA_14320 permease K07090 K07090; uncharacterized protein
D AFA_07595 permease K07090 K07090; uncharacterized protein
D AFA_17840 hypothetical protein K07090 K07090; uncharacterized protein
D AFA_02070 hypothetical protein K07090 K07090; uncharacterized protein
D AFA_12565 hypothetical protein K07090 K07090; uncharacterized protein
D AFA_06020 dTDP-glucose 4,6-dehydratase K07093 K07093; uncharacterized protein
D AFA_12065 metallophosphoesterase K07098 K07098; uncharacterized protein
D AFA_11525 nicotinate phosphoribosyltransferase K07101 K07101; uncharacterized protein
D AFA_14535 YeeE/YedE K07112 K07112; uncharacterized protein
D AFA_05675 hypothetical protein K07112 K07112; uncharacterized protein
D AFA_05680 hypothetical protein K07112 K07112; uncharacterized protein
D AFA_06225 hypothetical protein K07112 K07112; uncharacterized protein
D AFA_00610 SET domain-containing protein-lysine N-methyltransferase K07117 K07117; uncharacterized protein
D AFA_04035 3-beta hydroxysteroid dehydrogenase K07118 K07118; uncharacterized protein
D AFA_16745 ammonia monooxygenase K07120 K07120; uncharacterized protein
D AFA_07220 MOSC domain-containing protein K07140 K07140; MOSC domain-containing protein
D AFA_01600 hypothetical protein K07148 K07148; uncharacterized protein
D AFA_18605 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D AFA_08020 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein
D AFA_07405 hypothetical protein K09005 K09005; uncharacterized protein
D AFA_10890 hypothetical protein K09005 K09005; uncharacterized protein
D AFA_09045 glutamyl-tRNA amidotransferase K09117 K09117; uncharacterized protein
D AFA_01235 DUF493 domain-containing protein K09158 K09158; uncharacterized protein
D AFA_16005 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D AFA_08650 transcriptional regulator K09712 K09712; uncharacterized protein
D AFA_08665 hypothetical protein K09712 K09712; uncharacterized protein
D AFA_02310 DUF188 domain-containing protein K09768 K09768; uncharacterized protein
D AFA_07245 hypothetical protein K09790 K09790; uncharacterized protein
D AFA_07365 hypothetical protein K09791 K09791; uncharacterized protein
D AFA_10110 RnfH family protein K09801 K09801; uncharacterized protein
D AFA_12265 hypothetical protein K09803 K09803; uncharacterized protein
D AFA_07435 hypothetical protein K09857 K09857; uncharacterized protein
D AFA_13510 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D AFA_05005 GNAT family N-acetyltransferase K09919 K09919; uncharacterized protein
D AFA_02000 hypothetical protein K09921 K09921; uncharacterized protein
D AFA_07180 hypothetical protein K09922 K09922; uncharacterized protein
D AFA_00635 hypothetical protein K09943 K09943; uncharacterized protein
D AFA_16800 hypothetical protein K09943 K09943; uncharacterized protein
D AFA_08430 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein
D AFA_11410 hypothetical protein K09954 K09954; uncharacterized protein
D AFA_14795 hypothetical protein K09958 K09958; uncharacterized protein
D AFA_06875 DUF1073 domain-containing protein K09961 K09961; uncharacterized protein
D AFA_12615 hypothetical protein K09965 K09965; uncharacterized protein
D AFA_17655 histidine utilization protein HutD K09975 K09975; uncharacterized protein
D AFA_13640 hypothetical protein K09989 K09989; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024