+D GENES KO
#
KEGG Orthology (KO) - Malaciobacter pacificus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:apai00010]
D APAC_1871 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D APAC_1413 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D APAC_0366 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D APAC_0251 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D APAC_0131 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APAC_0249 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APAC_0250 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D APAC_2151 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D APAC_2458 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APAC_2259 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D APAC_2296 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D APAC_2295 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D APAC_0173 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D APAC_0172 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D APAC_0175 porG; pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D APAC_0174 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D APAC_1694 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D APAC_1695 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D APAC_1319 zinc-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D APAC_0386 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D APAC_0390 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D APAC_0400 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D APAC_2031 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D APAC_1869 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1996 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1405 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:apai00020]
D APAC_2183 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D APAC_1230 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D APAC_1015 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D APAC_1279 icd; isocitrate dehydrogenase, monomeric K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D APAC_1694 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D APAC_1695 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D APAC_1696 oorC; 2-oxoglutarate:acceptor oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D APAC_1693 oorD; 2-oxoglutarate:acceptor oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D APAC_2193 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D APAC_2194 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D APAC_2192 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D APAC_2034 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D APAC_1632 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D APAC_0546 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D APAC_0396 pycA; pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D APAC_1407 oadA; oxaloacetate decarboxylase, alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D APAC_1405 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D APAC_2296 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D APAC_2295 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D APAC_0173 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D APAC_0172 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D APAC_0175 porG; pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D APAC_0174 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00030 Pentose phosphate pathway [PATH:apai00030]
D APAC_1871 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D APAC_2015 zwf; glucose 6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D APAC_2014 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D APAC_1700 rpe; ribulose phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D APAC_2371 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D APAC_2306 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D APAC_0732 rpiB; allose-6-phosphate isomerase / ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D APAC_1869 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1996 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_0515 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D APAC_2013 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D APAC_2012 eda; multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D APAC_2018 gckA; glycerate-2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D APAC_0366 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D APAC_1413 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:apai00040]
D APAC_0704 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D APAC_1870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APAC_1700 rpe; ribulose phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D APAC_1374 putative aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:apai00051]
D APAC_1869 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1996 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_0705 bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D APAC_1374 putative aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D APAC_2019 mngB; mannosyl-3-phosphoglycerate phosphatase K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70]
D APAC_1413 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D APAC_0366 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D APAC_0251 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D APAC_0732 rpiB; allose-6-phosphate isomerase / ribose-5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:apai00052]
D APAC_1870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APAC_1869 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1996 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
D APAC_0704 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:apai00500]
D APAC_1870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APAC_1869 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1996 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1871 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:apai00520]
D APAC_0845 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D APAC_0484 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D APAC_0192 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D APAC_2441 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D APAC_1841 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APAC_2465 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D APAC_0706 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D APAC_0707 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D APAC_1747 polysaccharide biosynthesis protein, nucleotide sugar dehydrogenase, TviB family K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D APAC_2451 legG; GDP-2,4-diacetamido-2,4, 6-trideoxy-alpha-D-glucopyranose hydrolase / 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D APAC_2452 N-acetylneuraminate synthase family protein, putative legionaminic acid synthase LegI K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D APAC_2449 acylneuraminate cytidylyltransferase family protein K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D APAC_1869 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1996 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APAC_0704 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D APAC_1871 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D APAC_0705 bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D APAC_2454 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00620 Pyruvate metabolism [PATH:apai00620]
D APAC_2031 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D APAC_0173 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D APAC_0172 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D APAC_0175 porG; pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D APAC_0174 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D APAC_1694 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D APAC_1695 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D APAC_2296 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D APAC_2295 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D APAC_1319 zinc-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D APAC_0386 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D APAC_0390 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D APAC_0523 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D APAC_0524 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D APAC_2259 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D APAC_0317 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D APAC_0062 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D APAC_0063 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D APAC_0486 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D APAC_0400 aldB; aldehyde dehydrogenase B K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D APAC_0051 FAD/FMN-containing dehydrogenase K18930 dld; D-lactate dehydrogenase
D APAC_1560 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D APAC_1406 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D APAC_1408 oadG; oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D APAC_0396 pycA; pyruvate carboxylase, subunit A K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D APAC_1407 oadA; oxaloacetate decarboxylase, alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D APAC_1632 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D APAC_0546 mqo; malate:quinone-oxidoreductase K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D APAC_2034 fumA; fumarate hydratase, class I K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D APAC_2193 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D APAC_2194 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D APAC_2192 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D APAC_1405 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D APAC_0500 leuA; 2-isopropylmalate synthase, bacterial type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:apai00630]
D APAC_2031 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D APAC_1632 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D APAC_2183 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D APAC_1230 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D APAC_1015 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D APAC_2032 enoyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D APAC_1387 gmuE; coenzyme B12-dependent glutamate mutase GlmES, E (epsilon) subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D APAC_1388 gmuS; coenzyme B12-dependent glutamate mutase GlmES, S (sigma) subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D APAC_1864 glycolate oxidase, subunit GlcD-related protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D APAC_1535 anaerobic glycerol-3-phosphate dehydrogenase K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D APAC_0176 HAD superfamily hydrolase, probable phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D APAC_1487 phosphoglycolate phosphatase-like HAD superfamily hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D APAC_2574 gph; phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D APAC_2154 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APAC_0750 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D APAC_2018 gckA; glycerate-2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D APAC_2012 eda; multifunctional 2-keto-3-deoxygluconate 6-phosphate aldolase and 2-keto-4-hydroxyglutarate aldolase and oxaloacetate decarboxylase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D APAC_0975 fdhA; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D APAC_0976 fdhGII; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D APAC_0977 fdhO; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D APAC_1504 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:apai00640]
D APAC_2031 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D APAC_0523 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D APAC_0524 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D APAC_0173 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D APAC_0172 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D APAC_0175 porG; pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D APAC_0174 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D APAC_0047 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D APAC_0381 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D APAC_0317 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D APAC_0062 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D APAC_0063 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D APAC_0486 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D APAC_2232 prpC; 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D APAC_2233 acnD; [Fe-S] cluster-dependent 2-methylisocitrate dehydratase K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D APAC_2234 prpF; aconitate isomerase K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D APAC_1015 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D APAC_2231 prpB; 2-methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D APAC_1320 iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:apai00650]
D APAC_1406 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D APAC_2193 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D APAC_2194 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D APAC_2192 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D APAC_0173 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D APAC_0172 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D APAC_0175 porG; pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D APAC_0174 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D APAC_1694 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D APAC_1695 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D APAC_1452 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APAC_2570 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APAC_1451 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:apai00660]
D APAC_1452 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APAC_2570 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APAC_1451 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D APAC_1387 gmuE; coenzyme B12-dependent glutamate mutase GlmES, E (epsilon) subunit K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1]
D APAC_1388 gmuS; coenzyme B12-dependent glutamate mutase GlmES, S (sigma) subunit K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1]
D APAC_2032 enoyl-CoA hydratase K14449 mch; 2-methylfumaryl-CoA hydratase [EC:4.2.1.148]
D APAC_0664 ribonuclease activity regulator, RraA family K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D APAC_0194 leuC; isopropylmalate isomerase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D APAC_1092 leuD; isopropylmalate isomerase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D APAC_1093 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:apai00562]
D APAC_0483 suhB; inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D APAC_1752 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D APAC_0251 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:apai00190]
D APAC_2178 nuoA; NADH:quinone oxidoreductase I, membrane subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D APAC_2481 nuoA2; NADH:quinone oxidoreductase I, membrane subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D APAC_2179 nuoB; NADH:quinone oxidoreductase I, chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D APAC_2480 nuoB2; NADH:quinone oxidoreductase I, chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D APAC_2479 nuoC2; NADH:quinone oxidoreductase I, chain C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D APAC_2478 nuoD2; NADH:quinone oxidoreductase I, chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D APAC_2180 nuoCD; NADH:quinone oxidoreductase I, fused chains C and D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D APAC_2181 nuoE; NADH:quinone oxidoreductase I, chain E (thioredoxin-like [2Fe-2S] ferredoxin family) K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D APAC_2477 nuoE2; NADH:quinone oxidoreductase I, chain E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D APAC_2182 nuoF; NADH:quinone oxidoreductase I, NADH-binding chain F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D APAC_2476 NADH:quinone oxidoreductase I, chain G-like protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D APAC_2184 nuoG; NADH:quinone oxidoreductase I, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D APAC_2475 nuoG2; NADH:quinone oxidoreductase I, chain G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D APAC_2185 nuoH; NADH:quinone oxidoreductase I, membrane subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D APAC_2474 nuoH2; NADH:quinone oxidoreductase I, membrane subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D APAC_2186 nuoI; NADH:quinone oxidoreductase I, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D APAC_2473 nuoI2; NADH:quinone oxidoreductase I, chain I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D APAC_2187 nuoJ; NADH:quinone oxidoreductase I, membrane subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D APAC_2472 nuoJ2; NADH:quinone oxidoreductase I, membrane subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D APAC_2188 nuoK; NADH:quinone oxidoreductase I, membrane subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D APAC_2471 nuoK2; NADH:quinone oxidoreductase I, membrane subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D APAC_2189 nuoL; NADH:quinone oxidoreductase I, membrane subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D APAC_2470 nuoL2; NADH:quinone oxidoreductase I, membrane subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D APAC_2190 nuoM; NADH:quinone oxidoreductase I, membrane subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D APAC_2469 nuoM2; NADH:quinone oxidoreductase I, membrane subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D APAC_2191 nuoN; NADH:quinone oxidoreductase I, membrane subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D APAC_2468 nuoN2; NADH:quinone oxidoreductase I, membrane subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D APAC_2487 ndh; NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D APAC_2193 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D APAC_2194 frdB; fumarate reductase, iron-sulfur subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D APAC_2192 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D APAC_0330 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D APAC_0329 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D APAC_0328 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D APAC_0281 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D APAC_0480 putative membrane protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D APAC_0282 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D APAC_0283 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D APAC_0284 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D APAC_2509 cioA; cyanide-insensitive cytochrome oxidase CioAB, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D APAC_2510 cioB; cyanide-insensitive cytochrome oxidase CioAB, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D APAC_0566 cccA1; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D APAC_1384 cccA2; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D APAC_1884 atpA; ATP synthase, F1 complex, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D APAC_1882 atpD; ATP synthase, F1 complex, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D APAC_1883 atpG; ATP synthase, F1 complex, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D APAC_1885 atpH; ATP synthase, F1 complex, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D APAC_1881 atpC; ATP synthase, F1 complex, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D APAC_0335 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D APAC_1886 atpF; ATP synthase, F0 complex, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D APAC_1887 atpF'; ATP synthase, F0 complex, b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D APAC_0629 atpE; ATP synthase, F0 complex, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D APAC_0898 ppaB; inorganic pyrophosphatase, manganese-dependent K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D APAC_1958 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D APAC_1959 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:apai00680]
D APAC_0975 fdhA; formate dehydrogenase N, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D APAC_0976 fdhGII; formate dehydrogenase N, beta subunit, iron-sulfur cluster subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D APAC_0977 fdhO; formate dehydrogenase N, cytochrome b-556 subunit K00127 fdoI; formate dehydrogenase subunit gamma
D APAC_0750 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APAC_2018 gckA; glycerate-2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D APAC_2458 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APAC_1632 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D APAC_0366 fbaA; fructose-bisphosphate aldolase, class IIA K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D APAC_1413 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D APAC_0709 coenzyme F420 hydrogenase/dehydrogenase, beta subunit family protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1]
D APAC_0523 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D APAC_0524 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D APAC_2031 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D APAC_0173 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D APAC_0172 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D APAC_0175 porG; pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D APAC_0174 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D APAC_2151 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D APAC_0310 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D APAC_2307 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:apai00910]
D APAC_2336 nitrate ABC transporter, substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D APAC_2335 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D APAC_2334 nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D APAC_2337 narB; nitrate reductase K00367 narB; ferredoxin-nitrate reductase [EC:1.7.7.2]
D APAC_2342 nirB; NADH-dependent nitrite reductase, catalytic subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D APAC_2343 nirD; NADH-dependent nitrite reductase, small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D APAC_0740 npd; nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D APAC_0903 gdh2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D APAC_2154 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APAC_1754 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D APAC_1753 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D APAC_2266 canB; beta carbonic anhydrase, clade B K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D APAC_1224 cah; alpha carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:apai00920]
D APAC_2597 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D APAC_2596 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D APAC_0299 nrnA; nanoRNase / pAp phosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D APAC_2595 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D APAC_0591 soxA; sulfur oxidation protein SoxXA, diheme cytochrome c subunit K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D APAC_0588 soxX; sulfur oxidation protein SoxXA, monoheme cytochrome c subunit K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2]
D APAC_0372 quinoprotein dehydrogenase-associated SoxYZ-like carrier K17226 soxY; sulfur-oxidizing protein SoxY
D APAC_0589 soxY; sulfur oxidation protein SoxYZ, sulfur covalently binding protein K17226 soxY; sulfur-oxidizing protein SoxY
D APAC_0590 soxZ; sulfur oxidation protein SoxYZ, sulfur compound chelating protein K17227 soxZ; sulfur-oxidizing protein SoxZ
D APAC_0594 soxB; sulfur oxidation protein, thiosulfate hydrolase K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20]
D APAC_0586 soxC; sulfur oxidation protein SoxCD, sulfur dehydrogenase subunit K17225 soxC; sulfane dehydrogenase subunit SoxC
D APAC_0587 soxD; sulfur oxidation protein SoxCD, diheme cytochrome c subunit K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6]
D APAC_2200 nirA; ferredoxin-nitrite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D APAC_0196 putative NADH dehydrogenase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D APAC_0198 putative NADH dehydrogenase K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D APAC_0847 flavocytochrome c sulfide dehydrogenase, flavin-binding K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D APAC_2621 FadH2 and FCSD-flav_bind domain-containing protein K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D APAC_0846 cytochrome c K17230 fccA; cytochrome subunit of sulfide dehydrogenase
D APAC_0020 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D APAC_1232 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D APAC_2593 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D APAC_1119 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D APAC_0651 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:apai00061]
D APAC_0317 accA; acetyl-CoA carboxylase, carboxyltransferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D APAC_0062 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D APAC_0063 accC; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D APAC_0486 accD; acetyl-CoA carboxylase, carboxyltransferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D APAC_0319 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D APAC_1873 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D APAC_2249 fabH; beta-ketoacyl-[acp] synthase III (KASIII) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D APAC_0318 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D APAC_0320 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APAC_1322 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APAC_2492 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D APAC_0252 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D APAC_2352 aas; 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:apai00121]
D APAC_1684 short-chain dehydrogenase/reductase K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:apai00561]
D APAC_2018 gckA; glycerate-2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D APAC_1319 zinc-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D APAC_2248 plsX; acyl phosphate synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D APAC_0296 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D APAC_0243 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D APAC_0167 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:apai00564]
D APAC_0048 gpsA; glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D APAC_0296 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D APAC_0243 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D APAC_1527 glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D APAC_0167 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D APAC_0624 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D APAC_2352 aas; 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D APAC_0209 cdsA; CDP-diglyceride synthetase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D APAC_1455 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D APAC_2425 psd; phosphatidylserine decarboxylase, proenzyme K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D APAC_1685 pgsA; phosphatidylglycerophosphate synthase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D APAC_0141 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism [PATH:apai00565]
D APAC_0624 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D APAC_0624 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D APAC_0624 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:apai00592]
D APAC_0624 pldA; phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
D APAC_1759 putative lysophospholipase L1-like arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:apai00230]
D APAC_1869 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1996 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_0515 prs; ribose-phosphate diphosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D APAC_0274 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D APAC_1444 purD; phosphoribosylamine-glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D APAC_2625 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D APAC_0125 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D APAC_1935 purL; phosphoribosylformylglycinamidine synthase PurLQS, PurL subunit K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D APAC_0240 purS; phosphoribosylformylglycinamidine synthase PurLQS, PurS subunit K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D APAC_0241 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D APAC_0130 purM; phosphoribosylformylglycinamide cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D APAC_1905 purK; 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D APAC_1904 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D APAC_2087 purE2; 5-aminoimidazole ribonucleotide (AIR) carboxylase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D APAC_0239 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D APAC_0038 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D APAC_1934 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D APAC_0759 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D APAC_2531 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D APAC_0770 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D APAC_1087 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D APAC_1505 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D APAC_1103 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D APAC_2245 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D APAC_0609 putative dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D APAC_1710 putative nucleotide phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D APAC_0964 glutamine amidotransferase domain-containing protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D APAC_1623 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D APAC_0562 gmk; deoxyguanylate kinase / guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D APAC_0039 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D APAC_0040 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D APAC_1775 dgt; dGTP triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D APAC_1697 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase K21138 HDDC3; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase [EC:3.1.7.2]
D APAC_0742 spoT; ppGpp synthetase / guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D APAC_1454 exopolyphosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D APAC_1750 gppA; guanosine-5'-triphosphate, 3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D APAC_0138 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D APAC_0459 metallophosphoesterase (YmdB domain) K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D APAC_0818 adkII; adenylate kinase (lid-domain-containing Adk) K00939 adk; adenylate kinase [EC:2.7.4.3]
D APAC_0819 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D APAC_0784 histidine triad nucleotide-binding protein, Fhit branch K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D APAC_2597 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D APAC_2596 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D APAC_0874 ureB; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D APAC_0873 ureA; fusion of urease beta and gamma subunits K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00240 Pyrimidine metabolism [PATH:apai00240]
D APAC_1123 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APAC_0140 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APAC_2255 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D APAC_2328 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D APAC_1681 pyrD; dihydroorotate dehydrogenase 2 K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D APAC_2551 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D APAC_1833 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D APAC_0744 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D APAC_2245 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D APAC_0258 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D APAC_2197 peptidase, M48 family (DUF45 domain) K07043 upp; UTP pyrophosphatase [EC:3.6.1.-]
D APAC_2523 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D APAC_2531 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D APAC_0770 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D APAC_1087 DUF1255 domain-containing protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D APAC_0459 metallophosphoesterase (YmdB domain) K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D APAC_0039 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D APAC_0040 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D APAC_0061 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D APAC_1235 tmk; dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D APAC_2228 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:apai00250]
D APAC_1629 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D APAC_1625 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D APAC_0896 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D APAC_0067 asnBII; asparagine synthase (glutamine-hydrolyzing, glutamine amidotransferase class-II domain) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D APAC_1997 carbon-nitrogen hydrolase family protein K13566 NIT2; omega-amidase [EC:3.5.1.3]
D APAC_0895 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D APAC_1547 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D APAC_0686 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D APAC_0138 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D APAC_0038 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D APAC_2255 pyrB; aspartate carbamoyltransferase, catalytic subunit K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D APAC_1754 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D APAC_1753 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D APAC_0903 gdh2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D APAC_2154 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APAC_1123 carB; carbamoylphosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D APAC_0140 carA; carbamoylphosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D APAC_2618 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D APAC_0241 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D APAC_0484 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D APAC_0274 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:apai00260]
D APAC_0827 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APAC_1426 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APAC_1724 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D APAC_0098 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D APAC_0303 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D APAC_0331 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D APAC_0750 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APAC_2018 gckA; glycerate-2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D APAC_2151 pgm; phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D APAC_0310 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D APAC_2307 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D APAC_1455 pssA; phosphatidylserine synthase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D APAC_0336 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D APAC_2011 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D APAC_0760 trpB2; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D APAC_0041 trpB1; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D APAC_0830 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D APAC_0831 ectA; diaminobutanoate acetyltransferase K06718 ectA; L-2,4-diaminobutyric acid acetyltransferase [EC:2.3.1.178]
D APAC_0829 ectC; ectoine synthase K06720 ectC; L-ectoine synthase [EC:4.2.1.108]
C 00270 Cysteine and methionine metabolism [PATH:apai00270]
D APAC_1232 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D APAC_2593 cysK; cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D APAC_0652 metC; cystathionine-beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D APAC_2177 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D APAC_0155 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D APAC_0337 metE; cobalamin-independent homocysteine transmethylase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D APAC_0485 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D APAC_0129 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D APAC_1872 pfs; multifunctional 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase / 6-amino-6-deoxyfutalosine hydrolase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D APAC_1505 multi-copper polyphenol oxidoreductase laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D APAC_0163 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D APAC_0404 acd; 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D APAC_0827 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APAC_1426 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APAC_1724 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D APAC_0098 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D APAC_1119 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D APAC_0651 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D APAC_2591 metY; O-acetylhomoserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D APAC_0152 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D APAC_1629 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D APAC_0020 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D APAC_1632 mdh; malate dehydrogenase, NAD-dependent K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D APAC_0310 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:apai00280]
D APAC_0152 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D APAC_2370 3-hydroxyisobutyrate dehydrogenase family beta-hydroxyacid dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:apai00290]
D APAC_0336 ilvA; threonine deaminase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D APAC_0194 leuC; isopropylmalate isomerase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D APAC_1092 leuD; isopropylmalate isomerase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D APAC_1093 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D APAC_1452 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APAC_2570 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APAC_1451 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D APAC_2283 ilvC; acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D APAC_2400 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D APAC_0152 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D APAC_0500 leuA; 2-isopropylmalate synthase, bacterial type K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:apai00300]
D APAC_0098 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D APAC_0827 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APAC_1426 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APAC_1724 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D APAC_1683 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D APAC_0273 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D APAC_1070 dapD; tetrahydrodipicolinate succinylase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D APAC_2257 argD; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D APAC_1155 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D APAC_0127 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D APAC_0253 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D APAC_2199 PLP-dependent aminotransferase K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D APAC_0551 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D APAC_0783 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00220 Arginine biosynthesis [PATH:apai00220]
D APAC_1390 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D APAC_1547 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D APAC_0686 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D APAC_0874 ureB; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D APAC_0873 ureA; fusion of urease beta and gamma subunits K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
D APAC_2618 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D APAC_0241 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D APAC_2154 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APAC_0903 gdh2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D APAC_1629 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D APAC_1251 acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D APAC_1727 argJ; bifunctional ornithine acetyltransferase / N-acetylglutamate synthase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D APAC_0332 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D APAC_0690 argC; N-acetyl-gamma-glutamylphosphate reductase, common form K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D APAC_2257 argD; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:apai00330]
D APAC_1233 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D APAC_0901 speB; arginase/agmatinase/formiminoglutamate hydrolase, arginase family K01480 speB; agmatinase [EC:3.5.3.11]
D APAC_1593 peptidyl-arginine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D APAC_0129 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D APAC_1960 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D APAC_0613 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D APAC_1893 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D APAC_1992 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D APAC_1629 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:apai00340]
D APAC_0346 hisG(S); ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, catalytic subunit K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D APAC_0149 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D APAC_0508 hisA; N-(5'-phospho-L-ribosyl-formimino)-5-amino-1-(5'-phosphoribosyl)-4-imidazolecarboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D APAC_0510 hisH; imidazole glycerol phosphate synthase HisFH, HisH subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D APAC_0079 hisF; imidazole glycerol phosphate synthase HisFH, HisF subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D APAC_1246 hisB; imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D APAC_0255 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D APAC_2155 hisJ; histidinol-phosphate phosphatase K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D APAC_0407 hisD; histidinal dehydrogenase / histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:apai00350]
D APAC_1629 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D APAC_0255 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:apai00360]
D APAC_1629 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D APAC_0255 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D APAC_0785 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D APAC_0989 DRE-TIM metallolyase superfamily protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:apai00400]
D APAC_2305 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D APAC_1134 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D APAC_0520 aroD; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D APAC_1507 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D APAC_0406 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D APAC_0313 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D APAC_1902 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D APAC_0748 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D APAC_2172 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpG subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D APAC_1545 trpD; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpD subunit K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D APAC_1699 trpF; phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D APAC_1689 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D APAC_2011 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D APAC_0760 trpB2; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D APAC_0041 trpB1; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D APAC_0254 pheA; chorismate mutase / prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D APAC_1422 tyrA; chorismate mutase / prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D APAC_1629 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D APAC_0255 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:apai00410]
D APAC_0469 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D APAC_2312 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:apai00430]
D APAC_0903 gdh2; NAD-specific glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D APAC_0524 pta; phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D APAC_0523 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:apai00450]
D APAC_0651 Cys/Met metabolism PLP-dependent enzyme K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48]
D APAC_0652 metC; cystathionine-beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D APAC_2177 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D APAC_0155 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D APAC_0337 metE; cobalamin-independent homocysteine transmethylase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D APAC_0676 sufS; cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D APAC_0004 NADPH oxidoreductase, putative flavodoxin quinone reductase FqrB K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D APAC_0272 trxB; thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D APAC_2597 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D APAC_2596 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D APAC_0965 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D APAC_0957 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D APAC_1411 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:apai00460]
D APAC_0896 asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D APAC_0750 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:apai00470]
D APAC_0822 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D APAC_0781 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D APAC_2618 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D APAC_0241 purQ; phosphoribosylformylglycinamidine synthase PurLQS, glutaminase subunit PurQ K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D APAC_2240 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D APAC_2149 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D APAC_0127 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D APAC_0253 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D APAC_0785 FAD-dependent oxidoreductase K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:apai00480]
D APAC_0929 lactam utilization protein, LamB/YcsF family K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D APAC_0367 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D APAC_0762 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D APAC_1569 pepD; peptidase D K01270 pepD; dipeptidase D [EC:3.4.13.-]
D APAC_1279 icd; isocitrate dehydrogenase, monomeric K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D APAC_2015 zwf; glucose 6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D APAC_0825 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D APAC_0129 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:apai00540]
D APAC_2493 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D APAC_0301 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D APAC_1450 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D APAC_0691 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D APAC_2491 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D APAC_1514 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D APAC_0076 kpsF; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D APAC_1836 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D APAC_1247 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D APAC_1541 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D APAC_2082 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D APAC_1749 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D APAC_2391 DUF2219 domain-containing protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D APAC_0169 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D APAC_0880 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis [PATH:apai00542]
D APAC_0715 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:apai00541]
D APAC_1870 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D APAC_0704 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D APAC_1743 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D APAC_1740 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D APAC_1742 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D APAC_1741 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D APAC_0705 bifunctional mannose-6-phosphate isomerase / mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D APAC_2454 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102]
D APAC_2441 glmU; fused N-acetylglucosamine-1-phosphate uridyltransferase and glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D APAC_0706 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D APAC_0707 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D APAC_1747 polysaccharide biosynthesis protein, nucleotide sugar dehydrogenase, TviB family K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
C 00550 Peptidoglycan biosynthesis [PATH:apai00550]
D APAC_1841 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APAC_2465 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D APAC_2287 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D APAC_2149 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D APAC_0551 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D APAC_0781 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D APAC_0783 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D APAC_2439 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D APAC_2160 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D APAC_2150 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D APAC_2161 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D APAC_2153 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D APAC_1261 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D APAC_2163 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:apai00552]
D APAC_2160 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D APAC_0715 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:apai00543]
D APAC_0715 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D APAC_0714 glycosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D APAC_1232 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:apai00730]
D APAC_0146 thiC; HMP-P synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D APAC_1199 thiD; hydroxymethylpyrimidine kinase / phosphohydroxymethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D APAC_0680 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APAC_1035 thiI; tRNA uridine 4-sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D APAC_0256 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D APAC_0218 thiG; 1-deoxy-D-xylulose 5-phosphate:thiol sulfurtransferase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D APAC_0334 thiamine phosphate synthase (TMP-TENI domain) K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D APAC_0487 thiE; thiamine phosphate synthase (TMP-TENI domain) K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D APAC_0774 thiL; thiamine monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D APAC_0818 adkII; adenylate kinase (lid-domain-containing Adk) K00939 adk; adenylate kinase [EC:2.7.4.3]
D APAC_0819 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:apai00740]
D APAC_1392 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D APAC_1403 ribAB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase / GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D APAC_0308 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D APAC_1835 ribH; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, beta subunit) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D APAC_2497 ribE; 6,7-dimethyl-8-ribityllumazine synthase (riboflavin synthase, alpha subunit) K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D APAC_1859 ribF; bifunctional riboflavin kinase / FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D APAC_0069 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D APAC_1237 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:apai00750]
D APAC_0939 pdxH; pyridoxine 5'-phosphate oxidase / pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D APAC_0746 pdxA; 4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D APAC_0747 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D APAC_0331 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:apai00760]
D APAC_1625 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D APAC_0297 nadA; quinolinate synthase K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D APAC_0298 nadC; quinolinate phosphoribosyltransferase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D APAC_2531 umpG; broad specificity 5'(3')-nucleotidase and polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D APAC_0248 nadD; nicotinate-mononucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D APAC_1516 nadE; NAD synthetase, NH3-dependent K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D APAC_0545 pncC; NMN amidohydrolase K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D APAC_2092 ppnK; inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:apai00770]
D APAC_1452 ilvI; acetolactate synthase III, valine-sensitive, catalytic (large) subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APAC_2570 als; acetolactate synthase, catabolic K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D APAC_1451 ilvH; acetolactate synthase III, valine-sensitive, regulatory (small) subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D APAC_2283 ilvC; acetohydroxy acid isomeroreductase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D APAC_2400 ilvD; dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D APAC_2020 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D APAC_0259 panE; 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D APAC_2312 panC; pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D APAC_0345 coaX; pantothenate kinase, type III K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D APAC_2440 dfp; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D APAC_1236 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D APAC_0128 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D APAC_2310 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D APAC_1112 DUF479 domain-containing protein K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D APAC_0152 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D APAC_0469 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:apai00780]
D APAC_2548 SAM-dependent methyltransferase K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D APAC_0318 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D APAC_0320 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APAC_1322 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APAC_2492 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D APAC_0252 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D APAC_2265 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D APAC_1932 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D APAC_2029 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D APAC_2462 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D APAC_1890 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:apai00785]
D APAC_2297 lplA; lipoate--protein ligase A K23734 lipM; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D APAC_2298 lipA; lipoic acid synthetase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D APAC_2296 aceE; pyruvate dehydrogenase multienzyme complex, E1 component pyruvate dehydrogenase K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D APAC_2295 aceF; pyruvate dehydrogenase multienzyme complex, E2 component dihydrolipoyl transacetylase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00790 Folate biosynthesis [PATH:apai00790]
D APAC_1939 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D APAC_2084 Nif3-like dinuclear metal center protein, putative GTP cyclohydrolase K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D APAC_0295 folB; dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D APAC_0518 folK; 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D APAC_1423 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D APAC_2227 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D APAC_0425 folC; bifunctional folypolyglutamate synthetase / dihydrofolate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D APAC_1392 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D APAC_1403 ribAB; bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase / GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D APAC_2254 pabB; aminodeoxychorismate synthase, component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D APAC_2252 branched-chain amino acid aminotransferase, possible 4-amino-4-deoxychorismate lyase PabC K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D APAC_0322 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D APAC_0321 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D APAC_0323 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D APAC_0005 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D APAC_0357 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D APAC_2534 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D APAC_2157 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D APAC_1139 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D APAC_0324 moeA1; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D APAC_0982 moeA; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D APAC_1465 moeA2; molybdopterin molybdenumtransferase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D APAC_1313 molybdenum cofactor cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D APAC_0195 mobA; molybdenum cofactor guanylyltransferase protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:apai00670]
D APAC_2227 folA; dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D APAC_0734 folD; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase / 5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D APAC_0750 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D APAC_2625 purN; phosphoribosylglycinamide formyltransferase 1 K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D APAC_1934 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D APAC_1892 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D APAC_0155 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D APAC_2228 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D APAC_1504 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D APAC_1657 fau; 5-formyltetrahydrofolate cycloligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:apai00860]
D APAC_0083 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_1418 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_0410 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D APAC_1086 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D APAC_1391 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D APAC_2237 hemC; hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D APAC_1445 hemD; uroporphyrinogen III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D APAC_1722 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D APAC_1116 hemF; coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D APAC_1389 hemN1; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D APAC_0073 UPF0093 domain-containing membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D APAC_0569 hemH1; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D APAC_1312 hemH2; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D APAC_0355 cysG; uroporphyrinogen-III (C7)-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D APAC_0354 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D APAC_1433 sirohydrochlorin ferrochelatase family protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D APAC_2406 cbiP; adenosyl-cobyrate synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D APAC_2405 cbiB; adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D APAC_2414 cobU; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D APAC_2413 cobS; adenosylcobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D APAC_2412 cobD; L-threonine-O-3-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D APAC_1221 heme utilization protein HutZ K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:apai00130]
D APAC_0109 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D APAC_2176 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D APAC_1237 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D APAC_0463 ubiE; bifunctional 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase / S-adenosylmethionine:2-DMK methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D APAC_2159 mqnA2; 6-amino-6-deoxyfutalosine synthase K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D APAC_2268 menaquinone biosynthesis protein, SCO4494 family K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D APAC_0521 metallo-dependent hydrolase, subgroup D K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D APAC_1872 pfs; multifunctional 5'-methylthioadenosine / S-adenosylhomocysteine nucleosidase / 6-amino-6-deoxyfutalosine hydrolase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D APAC_1420 mqnC; dehypoxanthinylfutalosine cyclase K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D APAC_2466 mqnD; 1,4-dihydroxy-6-naphthoate synthase K11785 mqnD; 1,4-dihydroxy-6-naphthoate synthase [EC:1.14.-.-]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:apai00900]
D APAC_0256 dxs; 1-deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D APAC_0210 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D APAC_0143 ispDF; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D APAC_0279 ispE; 4-diphosphocytidyl-2-C-methylerythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D APAC_0754 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D APAC_0312 ispH; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D APAC_1237 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D APAC_0471 ispA; geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D APAC_0409 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D APAC_2439 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D APAC_2371 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:apai00523]
D APAC_1743 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D APAC_1740 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D APAC_1742 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D APAC_1741 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D APAC_1740 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:apai00332]
D APAC_1893 proB; gamma-glutamyl kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D APAC_1992 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:apai00261]
D APAC_2597 cysN; sulfate adenylyltransferase, GTPase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D APAC_2596 cysD; sulfate adenylyltransferase, subunit CysD K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D APAC_0827 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APAC_1426 lysC; aspartokinase, alpha and beta subunits K00928 lysC; aspartate kinase [EC:2.7.2.4]
D APAC_1724 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D APAC_1683 dapA; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D APAC_0273 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:apai00521]
D APAC_1869 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_1996 phosphomannomutase / phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D APAC_0483 suhB; inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D APAC_1752 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D APAC_1743 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D APAC_1740 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D APAC_1742 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D APAC_1741 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:apai00525]
D APAC_1743 glucose-1-phosphate thymidylyltransferase, short form K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D APAC_1740 dTDP-D-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:apai00401]
D APAC_1422 tyrA; chorismate mutase / prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D APAC_1629 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D APAC_0255 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D APAC_0748 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D APAC_2172 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpG subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D APAC_1873 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D APAC_0320 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APAC_1322 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APAC_0252 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D APAC_0319 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:apai00999]
D APAC_0485 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D APAC_1507 aroE; shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:apai00362]
D APAC_0989 DRE-TIM metallolyase superfamily protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D APAC_0664 ribonuclease activity regulator, RraA family K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D APAC_1406 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
C 00627 Aminobenzoate degradation
D APAC_1237 ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:apai00625]
D APAC_0386 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D APAC_0390 PQQ-dependent dehydrogenase, methanol/ethanol family K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8]
D APAC_1605 alpha/beta hydrolase family protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D APAC_1605 alpha/beta hydrolase family protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation
C 00622 Xylene degradation
D APAC_0989 DRE-TIM metallolyase superfamily protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation [PATH:apai00633]
D APAC_1017 [Ni-Fe] hydrogenase, small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D APAC_0173 porA; pyruvate:ferredoxin oxidoreductase, alpha subunit K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D APAC_0172 porB; pyruvate:ferredoxin oxidoreductase, beta subunit K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D APAC_0175 porG; pyruvate:ferredoxin oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D APAC_0174 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation
D APAC_0874 ureB; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D APAC_0873 ureA; fusion of urease beta and gamma subunits K14048 ureAB; urease subunit gamma/beta [EC:3.5.1.5]
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D APAC_0989 DRE-TIM metallolyase superfamily protein K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:apai03020]
D APAC_2135 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D APAC_2134 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D APAC_1100 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D APAC_0743 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:apai03010]
D APAC_0311 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D APAC_0558 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D APAC_0794 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D APAC_1099 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D APAC_0805 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D APAC_2279 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D APAC_2094 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D APAC_0802 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D APAC_0178 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D APAC_0787 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D APAC_1098 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D APAC_2095 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D APAC_1097 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D APAC_0801 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D APAC_0359 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D APAC_2079 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D APAC_0797 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D APAC_2277 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D APAC_0792 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D APAC_0191 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D APAC_2535 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D APAC_2138 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D APAC_0791 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D APAC_0788 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D APAC_0789 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D APAC_0800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D APAC_0803 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D APAC_2136 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D APAC_1240 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D APAC_2137 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D APAC_2139 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D APAC_0179 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D APAC_0798 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D APAC_0806 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D APAC_0795 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D APAC_1101 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D APAC_0804 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D APAC_0340 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D APAC_0200 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D APAC_1896 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D APAC_0793 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D APAC_0790 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D APAC_0799 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D APAC_0735 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D APAC_1895 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D APAC_1729 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D APAC_0796 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D APAC_0104 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D APAC_2247 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D APAC_2143 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D APAC_1914 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D APAC_0201 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D APAC_1096 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D APAC_1716 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:apai00970]
D APAC_1714 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APAC_2167 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APAC_2540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APAC_0221 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APAC_0224 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APAC_0110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APAC_1718 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APAC_1719 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APAC_1720 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APAC_0537 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APAC_0541 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APAC_2397 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D APAC_0948 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APAC_1786 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APAC_0539 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APAC_0543 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APAC_1130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APAC_0223 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APAC_0225 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APAC_1790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APAC_2145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APAC_0220 tRNA-His K14226 tRNA-His; tRNA His
D APAC_1715 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APAC_2168 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APAC_2541 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APAC_0222 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APAC_1372 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APAC_0945 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APAC_2399 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APAC_0540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APAC_0544 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APAC_1401 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_1831 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_1788 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_1789 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_1402 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_0946 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D APAC_2148 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D APAC_0837 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D APAC_0219 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D APAC_2398 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APAC_2147 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APAC_1400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APAC_1787 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APAC_2142 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D APAC_0947 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D APAC_2146 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D APAC_0538 tRNA-Val K14237 tRNA-Val; tRNA Val
D APAC_0542 tRNA-Val K14237 tRNA-Val; tRNA Val
D APAC_0958 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D APAC_0083 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_1418 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_1102 gatA; Glu-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D APAC_0049 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D APAC_2299 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D APAC_1986 glutaminyl-tRNA synthetase / YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D APAC_0266 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D APAC_0813 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D APAC_2085 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D APAC_1397 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D APAC_0203 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D APAC_0352 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D APAC_0957 selA; selenocysteine synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D APAC_2274 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D APAC_1411 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D APAC_1892 fmt; 10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D APAC_0603 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D APAC_0423 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D APAC_0547 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D APAC_0751 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D APAC_0246 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D APAC_0411 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D APAC_0137 hisZ; ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D APAC_1234 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D APAC_0315 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D APAC_0314 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D APAC_0741 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D APAC_0349 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:apai03060]
D APAC_0807 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D APAC_2141 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D APAC_2549 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D APAC_0418 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D APAC_0419 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D APAC_0417 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D APAC_1912 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APAC_1283 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D APAC_2080 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D APAC_1659 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D APAC_0245 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D APAC_1521 tatB; twin arginine translocation system, TatB protein K03117 tatB; sec-independent protein translocase protein TatB
D APAC_1522 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC
D APAC_0733 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D APAC_0193 lspA; prolipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:apai04122]
D APAC_0680 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APAC_0020 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D APAC_0516 mnmA1; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D APAC_0517 mnmA2; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D APAC_2157 moaE; molybdopterin synthase, large subunit K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D APAC_0357 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D APAC_2158 moaD; molybdopterin synthase, small subunit K03636 moaD; sulfur-carrier protein
D APAC_1122 thiF; ThiS adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D APAC_2023 FeThRed_B, RHOD domain-containing protein K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D APAC_2534 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D APAC_1139 mogA; molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D APAC_1035 thiI; tRNA uridine 4-sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D APAC_2262 thiS; thiamine biosynthesis protein K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:apai03018]
D APAC_1427 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D APAC_2458 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APAC_1440 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D APAC_1072 DEAD-box ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D APAC_1334 DEAD-box ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D APAC_2282 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D APAC_0064 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D APAC_2221 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D APAC_2242 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D APAC_1656 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D APAC_0077 mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D APAC_2429 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D APAC_0473 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APAC_1958 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D APAC_1959 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:apai03030]
D APAC_0525 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_0531 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1304 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1698 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_2530 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APAC_2239 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APAC_1424 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APAC_2280 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APAC_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APAC_0756 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D APAC_1898 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D APAC_2278 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D APAC_1662 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APAC_1767 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APAC_1900 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APAC_1967 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APAC_1916 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D APAC_1588 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:apai03410]
D APAC_0699 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D APAC_2568 ung; uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D APAC_0811 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D APAC_0881 xth; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D APAC_2486 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D APAC_2524 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D APAC_1588 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:apai03420]
D APAC_0448 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D APAC_1229 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D APAC_0696 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D APAC_0823 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D APAC_0277 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APAC_0585 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APAC_1588 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:apai03430]
D APAC_0504 mutS; DNA mismatch repair ATPase K03555 mutS; DNA mismatch repair protein MutS
D APAC_1141 mutS2; DNA mismatch binding protein, MutS2 family K07456 mutS2; DNA mismatch repair protein MutS2
D APAC_0277 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APAC_0585 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APAC_0464 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D APAC_1120 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D APAC_1524 DEDDh 3'-5' exonuclease domain family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D APAC_2524 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D APAC_2278 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D APAC_2530 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APAC_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APAC_2239 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APAC_2280 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APAC_1424 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APAC_0525 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_0531 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1304 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1698 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1588 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:apai03440]
D APAC_2524 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D APAC_2278 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D APAC_1556 recR; recombination protein K06187 recR; recombination protein RecR
D APAC_2457 recA; recombinase K03553 recA; recombination protein RecA
D APAC_0780 ruvA; RuvABC resolvasome, subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D APAC_2021 ruvB; RuvABC resolvasome, subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D APAC_2626 ruvC; RuvABC resolvasome, subunit RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D APAC_0333 addA; AddAB recombination complex, helicase AddA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D APAC_1269 helicase, RecD/TraA family (non-RecBCD) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D APAC_2530 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APAC_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APAC_2239 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APAC_2280 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APAC_1424 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APAC_0525 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_0531 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1304 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1698 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1069 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:apai02010]
D APAC_0983 tupA; tungsten ABC transporter TupABC, periplasmic tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D APAC_0984 tupB; tungsten ABC transporter TupABC, permease protein K05773 tupB; tungstate transport system permease protein
D APAC_0985 tupC; tungsten ABC transporter TupABC, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D APAC_2336 nitrate ABC transporter, substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D APAC_2335 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D APAC_2334 nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D APAC_0026 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D APAC_0024 modB; molybdenum ABC transporter ModABC, permease protein K02018 modB; molybdate transport system permease protein
D APAC_0022 modC; molybdenum ABC transporter ModABC, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D APAC_2173 iron(III)/spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D APAC_2174 iron(III)/spermidine/putrescine ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D APAC_2175 iron(III)/spermidine/putrescine ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D APAC_0835 proX; proline/glycine betaine ABC transporter ProVWX, substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D APAC_0833 proW; proline/glycine betaine ABC transporter ProVWX, permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D APAC_0832 proV; proline/glycine betaine ABC transporter ProVWX, ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D APAC_1007 mlaC; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D APAC_2388 mlaD; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D APAC_2386 mlaE; lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D APAC_2387 mlaF; lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D APAC_0188 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D APAC_0186 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D APAC_0185 pstA; phosphate ABC transporter, permease protein (DUF3333 domain) K02038 pstA; phosphate transport system permease protein
D APAC_0184 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D APAC_1059 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D APAC_1060 livH; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D APAC_1061 livM; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D APAC_1062 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D APAC_1063 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D APAC_0864 urtA; urea ABC transporter UrtABCDE, periplasmic substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D APAC_0865 urtB; urea ABC transporter UrtABCDE, permease protein K11960 urtB; urea transport system permease protein
D APAC_0866 urtC; urea ABC transporter UrtABCDE, permease protein K11961 urtC; urea transport system permease protein
D APAC_0867 urtD; urea ABC transporter UrtABCDE, ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D APAC_0868 urtE; urea ABC transporter UrtABCDE, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D APAC_0648 metal ion ABC transporter, periplasmic metal-binding protein K09815 znuA; zinc transport system substrate-binding protein
D APAC_0814 periplasmic substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D APAC_0574 metal ion ABC transporter, membrane protein K09816 znuB; zinc transport system permease protein
D APAC_0573 metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D APAC_1044 cbiM; cobalt/nickel ECF transporter CbiMNQO, S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D APAC_1046 cbiQ; cobalt/nickel ECF transporter CbiMNQO, T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D APAC_1047 cbiO; cobalt/nickel ECF transporter CbiMNQO, A component, ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D APAC_1043 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D APAC_1045 cbiN; cobalt/nickel ECF transporter CbiMNQO, S component CbiN K16915 cbiL; nickel transport protein
D APAC_0481 ABC transporter, ATP-binding protein, FtsE/LolD family K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D APAC_2437 lptF; lipooligosaccharide transport system, ABC transporter permease component LptF K07091 lptF; lipopolysaccharide export system permease protein
D APAC_0737 lptG; lipooligosaccharide transport system, ABC transporter permease component LptG K11720 lptG; lipopolysaccharide export system permease protein
D APAC_1543 lptB; lipooligosaccharide transport system, ABC transporter ATP-binding component LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D APAC_1078 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D APAC_1079 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D APAC_1680 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D APAC_1128 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D APAC_1576 ABC transporter, ATP-binding/permease components K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D APAC_2376 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:apai03070]
D APAC_0641 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_0660 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1341 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1793 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1817 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D
D APAC_1848 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D
D APAC_1940 type II secretion/transformation system, F protein K02455 gspF; general secretion pathway protein F
D APAC_0757 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G
D APAC_1856 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G
D APAC_1847 type II secretion/transformation system, E protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D APAC_1941 type II secretion/transformation system, E protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D APAC_0418 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D APAC_0419 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D APAC_2141 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D APAC_2549 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D APAC_0807 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D APAC_0417 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D APAC_1912 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APAC_1283 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D APAC_1659 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D APAC_2080 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D APAC_0245 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D APAC_1521 tatB; twin arginine translocation system, TatB protein K03117 tatB; sec-independent protein translocase protein TatB
D APAC_1522 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:apai02020]
D APAC_0180 phoR; two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D APAC_0188 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D APAC_2401 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D APAC_1795 RND family efflux system, membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D APAC_0091 putative copper/silver efflux system, membrane fusion protein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system
D APAC_0092 CusA family copper/silver efflux pump K07787 cusA; copper/silver efflux system protein
D APAC_1302 putative flagellar protein K02406 fliC; flagellin
D APAC_2445 flaA; flagellin K02406 fliC; flagellin
D APAC_2446 flaB; flagellin K02406 fliC; flagellin
D APAC_2058 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D APAC_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D APAC_1299 dccR; two-component system response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D APAC_0894 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_1147 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_2359 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_0458 PAS sensor-containing two-component system histidine kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D APAC_0270 two-component system sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D APAC_2030 putative (3S)-malyl-CoA thioesterase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D APAC_2033 putative CoA ester lyase K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D APAC_0765 signal transduction sensor histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D APAC_2351 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D APAC_2329 nitrogen regulatory protein P-II, GlnB/GlnK K04751 glnB; nitrogen regulatory protein P-II 1
D APAC_2331 nitrogen regulatory protein P-II, GlnB/GlnK K04751 glnB; nitrogen regulatory protein P-II 1
D APAC_2154 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APAC_0893 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_0970 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_1778 Cache sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_2339 two-component system sensor histidine kinase (DUF3365 domain) K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_1017 [Ni-Fe] hydrogenase, small subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6]
D APAC_1021 hyaC; [Ni-Fe] hydrogenase, cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D APAC_1437 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D APAC_0779 MCP-domain signal transduction protein (DUF3365 domain) K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0029 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0348 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0379 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0639 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1149 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1292 NIT sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1475 Cache sensor-containing MCP-domain signal transduction protein (chemoreceptor zinc-binding domain) K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1491 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1587 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_2090 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0465 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D APAC_1438 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D APAC_1189 signal transduction response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_1439 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_2073 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_1435 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D APAC_0687 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D APAC_1755 TRAP transporter, substrate binding protein, DctP family K11688 dctP; C4-dicarboxylate-binding protein DctP
D APAC_1756 TRAP transporter, small permease subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D APAC_1757 TRAP transporter, large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D APAC_0763 two-component system response regulator c-di-GMP phosphodiesterase, RpfG family K13815 rpfG; two-component system, response regulator RpfG
D APAC_2618 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D APAC_0330 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D APAC_0329 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D APAC_0328 petC; ubiquinol cytochrome c oxidoreductase PetABC, membrane-bound cytochrome c subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D APAC_0566 cccA1; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D APAC_1384 cccA2; periplasmic monoheme cytochrome c553 K08738 CYC; cytochrome c
D APAC_0281 ccoN; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D APAC_0480 putative membrane protein K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D APAC_0282 ccoO; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D APAC_0283 ccoQ; cytochrome c oxidase CcoNOPQ, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D APAC_0284 ccoP; cytochrome c oxidase CcoNOPQ, cbb3-type, membrane-bound monoheme cytochrome c subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D APAC_2509 cioA; cyanide-insensitive cytochrome oxidase CioAB, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D APAC_2510 cioB; cyanide-insensitive cytochrome oxidase CioAB, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D APAC_0641 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_0660 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1341 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1793 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_0716 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D APAC_1998 low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D APAC_0706 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D APAC_0707 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336]
D APAC_0621 signal transduction sensor histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D APAC_0330 petA; ubiquinol cytochrome c oxidoreductase PetABC, [2Fe-2S] subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:apai02024]
D APAC_0163 luxS; S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D APAC_0748 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D APAC_2172 trpG; anthranilate phosphoribosyltransferase / anthranilate synthase component II, TrpG subunit K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D APAC_2305 aroG; 2-dehydro-3-deoxyphosphoheptonate aldolase (DAHP synthetase, class II) K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D APAC_1059 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D APAC_1060 livH; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D APAC_1061 livM; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D APAC_1062 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D APAC_1063 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D APAC_2373 Calx-beta domain-containing protein K20276 bapA; large repetitive protein
D APAC_0763 two-component system response regulator c-di-GMP phosphodiesterase, RpfG family K13815 rpfG; two-component system, response regulator RpfG
D APAC_1392 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D APAC_0308 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D APAC_1299 dccR; two-component system response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D APAC_0177 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D APAC_2311 dipeptide/oligopeptide/nickel ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D APAC_1654 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D APAC_2152 putative dipeptide/oligopeptide/nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D APAC_0568 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D APAC_1912 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APAC_2141 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D APAC_2549 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D APAC_0807 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D APAC_0417 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D APAC_1283 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D APAC_1659 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D APAC_2080 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:apai02030]
D APAC_0779 MCP-domain signal transduction protein (DUF3365 domain) K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0029 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0348 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0379 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0639 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1149 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1292 NIT sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1475 Cache sensor-containing MCP-domain signal transduction protein (chemoreceptor zinc-binding domain) K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1491 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1587 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_2090 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1438 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D APAC_0465 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D APAC_1189 signal transduction response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_1439 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_2073 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_1188 cheC; response regulator phosphatase K03410 cheC; chemotaxis protein CheC
D APAC_1435 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D APAC_0687 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D APAC_1436 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D APAC_1437 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D APAC_2068 fliG; flagellar motor switch C-ring protein FliG K02410 fliG; flagellar motor switch protein FliG
D APAC_2327 fliM; flagellar motor switch C-ring protein FliM K02416 fliM; flagellar motor switch protein FliM
D APAC_2059 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN
D APAC_2066 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN
D APAC_2058 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D APAC_1601 OmpA domain-containing protein K02557 motB; chemotaxis protein MotB
D APAC_2057 motBII; flagellar motor stator protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:apai02040]
D APAC_2050 fliE; flagellar proximal rod protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D APAC_2069 fliF; flagellar inner membrane MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D APAC_2068 fliG; flagellar motor switch C-ring protein FliG K02410 fliG; flagellar motor switch protein FliG
D APAC_2067 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component K02411 fliH; flagellar assembly protein FliH
D APAC_2044 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D APAC_2321 fliL; flagellar motor-associated protein FliL K02415 fliL; flagellar protein FliL
D APAC_2327 fliM; flagellar motor switch C-ring protein FliM K02416 fliM; flagellar motor switch protein FliM
D APAC_2059 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN
D APAC_2066 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN
D APAC_1260 fliP; flagellar export apparatus, transmembrane gate complex, FliP component K02419 fliP; flagellar biosynthesis protein FliP
D APAC_2324 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component K02420 fliQ; flagellar biosynthesis protein FliQ
D APAC_2047 fliR; flagellar export apparatus, transmembrane gate complex, FliR component K02421 fliR; flagellar biosynthesis protein FliR
D APAC_2042 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component K02400 flhA; flagellar biosynthesis protein FlhA
D APAC_2046 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component K02401 flhB; flagellar biosynthesis protein FlhB
D APAC_2070 flgB; flagellar proximal rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D APAC_2049 flgC; flagellar proximal rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D APAC_2065 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D APAC_2063 flgE2; flagellar hook protein, epsilonproteobacterial variant K02390 flgE; flagellar hook protein FlgE
D APAC_2064 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D APAC_2071 flgG; flagellar distal rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D APAC_2074 flgF; flagellar distal rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG
D APAC_2319 flgH; flagellar outer membrane L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D APAC_2326 flgI; flagellar peptidoglycan-localized P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D APAC_2056 putative flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D APAC_2318 flgK; proximal flagellar hook-filament junction protein K02396 flgK; flagellar hook-associated protein 1
D APAC_2043 flgL; distal flagellar hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D APAC_1302 putative flagellar protein K02406 fliC; flagellin
D APAC_2445 flaA; flagellin K02406 fliC; flagellin
D APAC_2446 flaB; flagellin K02406 fliC; flagellin
D APAC_2317 fliD; flagellar filament cap protein K02407 fliD; flagellar hook-associated protein 2
D APAC_2316 fliS; flagellar chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D APAC_2058 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D APAC_1601 OmpA domain-containing protein K02557 motB; chemotaxis protein MotB
D APAC_2057 motBII; flagellar motor stator protein K02557 motB; chemotaxis protein MotB
D APAC_1091 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D APAC_2458 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D APAC_0155 metH; cobalamin-dependent methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:apai01501]
D APAC_0845 glycosyl hydrolase, family 3 K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D APAC_0658 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D APAC_0641 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_0660 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1341 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1793 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_2153 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D APAC_1261 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D APAC_2163 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D APAC_0171 putative class D beta-lactamase K17838 oxa; beta-lactamase class D [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:apai01502]
D APAC_0894 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_1147 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_2359 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_0781 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D APAC_0822 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D APAC_0783 murF; D-alanyl-D-alanine-adding enzyme K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D APAC_2150 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D APAC_2161 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:apai01503]
D APAC_0169 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D APAC_0739 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D APAC_2401 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D APAC_0658 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D APAC_0641 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_0660 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1341 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1793 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_2493 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:apai01000]
C 01001 Protein kinases [BR:apai01001]
D APAC_0722 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D APAC_1156 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D APAC_0180 phoR; two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D APAC_0086 two-component system sensor histidine kinase, putative CusS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_0363 cosS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_0452 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_0668 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_1300 dccS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_1498 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_1703 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_2403 cprS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_2616 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_0765 signal transduction sensor histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D APAC_0458 PAS sensor-containing two-component system histidine kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D APAC_0270 two-component system sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D APAC_1309 two-component system sensor histidine kinase, LytS/YehU family K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D APAC_0893 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_0970 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_1778 Cache sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_2339 two-component system sensor histidine kinase (DUF3365 domain) K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_1438 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D APAC_0621 signal transduction sensor histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D APAC_0911 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D APAC_0850 two-component system sensor histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D APAC_0950 two-component system sensor histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D APAC_1170 two-component system sensor histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:apai01009]
D APAC_0925 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D APAC_2307 serB; phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:apai01002]
D APAC_0193 lspA; prolipoprotein signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D APAC_2438 peptidase A24 N-terminal domain-containing protein, putative prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D APAC_1022 hyaD; [Ni-Fe] hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D APAC_0964 glutamine amidotransferase domain-containing protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D APAC_1623 guaA; GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D APAC_0262 outer membrane lipoprotein, NlpC/P60 family K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D APAC_0263 outer membrane lipoprotein, NlpC/P60 family K13695 nlpC; probable lipoprotein NlpC
D APAC_0274 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D APAC_1754 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D APAC_0484 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D APAC_0067 asnBII; asparagine synthase (glutamine-hydrolyzing, glutamine amidotransferase class-II domain) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D APAC_2527 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D APAC_1215 murein L,D-transpeptidase, YcbB/YkuD family K21470 ycbB; L,D-transpeptidase YcbB
D APAC_2229 murein L,D-transpeptidase, YcbB/YkuD family K21470 ycbB; L,D-transpeptidase YcbB
D APAC_1430 zinc-dependent peptidase, M3 family K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D APAC_0367 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D APAC_0762 leucyl aminopeptidase, peptidase M17 family K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D APAC_1548 glutamate carboxypeptidase, peptidase M20 family K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D APAC_1155 dapE; N-succinyl-diaminopimelate deacylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D APAC_1569 pepD; peptidase D K01270 pepD; dipeptidase D [EC:3.4.13.-]
D APAC_0808 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D APAC_0519 pepQ; Xaa-Pro dipeptidase, M24 metallopeptidase family K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D APAC_0493 ftsH2; integral membrane ATP-dependent zinc metallopeptidase (extracellular domain) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D APAC_1137 ftsH1; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D APAC_1908 htpX; heat shock protein HtpX, M48 family peptidase K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D APAC_1686 RseP-like zinc metalloprotease, M50 family K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D APAC_2401 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D APAC_1950 clpP; serine protease ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D APAC_0615 lon; DNA-binding, ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D APAC_0733 lepB; leader peptidase (signal peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D APAC_0238 ctpA; carboxyl-terminal protease family protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D APAC_0522 sppA; signal peptide peptidase protease IV K04773 sppA; protease IV [EC:3.4.21.-]
D APAC_1241 hslV; heat shock protein HslVU, ATP-dependent protease subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D APAC_2089 collagenase-like peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:apai01003]
D APAC_2153 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D APAC_0714 glycosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180]
D APAC_0715 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D APAC_2017 mngA; mannosyl-3-phosphoglycerate synthase K13693 gpgS; glucosyl-3-phosphoglycerate synthase [EC:2.4.1.266]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:apai01005]
D APAC_2493 lpxA; UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D APAC_2491 lpxB; lipid A disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D APAC_0301 lpxC; UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D APAC_1450 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D APAC_0691 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D APAC_1514 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D APAC_1749 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D APAC_2391 DUF2219 domain-containing protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D APAC_2082 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase (KDO transferase) K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D APAC_0169 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D APAC_1836 kdsA; 3-deoxy-D-manno-octulosonate 8-phosphate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D APAC_1541 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D APAC_1247 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D APAC_0076 kpsF; D-arabinose 5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D APAC_0880 waaF; heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D APAC_0715 undecaprenyl/decaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:apai01011]
D APAC_1841 murA; UDP-N-acetylglucosamine enolpyruvoyl transferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D APAC_2465 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D APAC_2287 murC; UDP-N-acetylmuramate-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D APAC_2149 murD; UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D APAC_0551 murE; UDP-N-acetylmuramoylalanyl-D-glutamate 2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D APAC_0781 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D APAC_0822 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D APAC_2240 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D APAC_2150 mraY; phospho-N-acetylmuramoyl-pentapeptide transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D APAC_2161 murG; N-acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D APAC_2160 bacA; undecaprenyl pyrophosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D APAC_1679 murJ; lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase
D APAC_2153 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D APAC_1261 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D APAC_2163 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D APAC_1215 murein L,D-transpeptidase, YcbB/YkuD family K21470 ycbB; L,D-transpeptidase YcbB
D APAC_2229 murein L,D-transpeptidase, YcbB/YkuD family K21470 ycbB; L,D-transpeptidase YcbB
D APAC_0262 outer membrane lipoprotein, NlpC/P60 family K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13]
D APAC_1416 slt; soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D APAC_1280 YceG-like protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D APAC_1245 rlpA; septal ring lytic transglycosylase K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D APAC_0739 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:apai01004]
D APAC_1873 fabD; malonyl-CoA-[acp] transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D APAC_2249 fabH; beta-ketoacyl-[acp] synthase III (KASIII) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D APAC_0318 fabF; beta-ketoacyl-[acp] synthase II (KASII) K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D APAC_0320 fabG; 3-oxoacyl-[acp] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APAC_1322 short-chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D APAC_2492 fabZ; 3-hydroxyacyl-[acp] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D APAC_0252 fabI; enoyl-[acp] reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D APAC_1759 putative lysophospholipase L1-like arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D APAC_2031 acyl-CoA synthetase (AMP-forming) / AMP-acid ligase II (CitE domain) K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D APAC_2248 plsX; acyl phosphate synthase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D APAC_0296 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D APAC_0243 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:apai01006]
D APAC_0471 ispA; geranyl diphosphate synthase / farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D APAC_0409 ispB; octaprenyl-diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D APAC_2439 ispU; undecaprenyl diphosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D APAC_0105 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D APAC_0109 ubiA; 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:apai01007]
D APAC_0083 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_1418 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_1986 glutaminyl-tRNA synthetase / YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D APAC_0741 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D APAC_0349 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D APAC_2274 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D APAC_0246 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D APAC_1411 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D APAC_0547 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D APAC_0603 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D APAC_0423 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D APAC_0751 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D APAC_0813 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D APAC_0137 hisZ; ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D APAC_1234 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D APAC_2085 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D APAC_1397 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D APAC_0352 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D APAC_0411 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D APAC_0203 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D APAC_0266 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D APAC_0315 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D APAC_0314 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D APAC_1629 aspB; aspartate aminotransferase, class I and II aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D APAC_0099 aspartate aminotransferase, class I and II aminotransferase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D APAC_0255 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D APAC_2265 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D APAC_2177 putative C-S lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D APAC_2257 argD; N-succinyldiaminopimelate-aminotransferase / acetylornithine transaminase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D APAC_0830 ectB; diaminobutyrate-2-oxoglutarate transaminase K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D APAC_1932 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D APAC_1086 hemL; glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D APAC_0152 ilvE; branched-chain amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D APAC_2454 aminotransferase, DegT/DnrJ/EryC1/StrS family K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:apai00194]
D APAC_1881 atpC; ATP synthase, F1 complex, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D APAC_1882 atpD; ATP synthase, F1 complex, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D APAC_1883 atpG; ATP synthase, F1 complex, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D APAC_1884 atpA; ATP synthase, F1 complex, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D APAC_1885 atpH; ATP synthase, F1 complex, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D APAC_1886 atpF; ATP synthase, F0 complex, b subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D APAC_1887 atpF'; ATP synthase, F0 complex, b' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D APAC_0629 atpE; ATP synthase, F0 complex, c subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D APAC_0335 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:apai03000]
D APAC_0397 transcriptional regulator, AraC family (GyrI domain) K13652 K13652; AraC family transcriptional regulator
D APAC_2198 transcriptional regulator, AraC family (GyrI domain) K13652 K13652; AraC family transcriptional regulator
D APAC_0276 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D APAC_0836 ectR; transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D APAC_1273 hspR; heat shock transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D APAC_1347 transcriptional regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D APAC_2005 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D APAC_1675 perR; peroxide stress transcriptional regulator PerR K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D APAC_0360 transcriptional regulator, IscR/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D APAC_2592 iscR; transcriptional regulator, IscR/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D APAC_2368 arsR; transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D APAC_0854 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D APAC_1890 birA; biotin-[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D APAC_0027 modE; transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D APAC_0980 transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D APAC_0703 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D APAC_0729 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D APAC_0724 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D APAC_1888 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D APAC_2431 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D APAC_1828 putative transcriptional regulator, AlpA family K07733 alpA; prophage regulatory protein
D APAC_2102 hypothetical protein K07733 alpA; prophage regulatory protein
D APAC_0234 dksA1; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D APAC_0489 dksA2; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:apai03021]
D APAC_1100 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D APAC_2135 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D APAC_2134 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D APAC_0743 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D APAC_1091 rpoD; RNA polymerase sigma70 factor K03086 rpoD; RNA polymerase primary sigma factor
D APAC_2273 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D APAC_1834 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D APAC_2140 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D APAC_0234 dksA1; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D APAC_0489 dksA2; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D APAC_0689 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D APAC_2242 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D APAC_2576 hypothetical protein K19000 rof; Rho-binding antiterminator
C 03019 Messenger RNA biogenesis [BR:apai03019]
D APAC_1901 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D APAC_0077 mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily) K12574 rnj; ribonuclease J [EC:3.1.-.-]
D APAC_1656 ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D APAC_2282 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D APAC_1072 DEAD-box ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D APAC_1334 DEAD-box ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D APAC_0064 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D APAC_2221 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D APAC_2458 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APAC_1440 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D APAC_2242 rho; transcription termination factor K03628 rho; transcription termination factor Rho
D APAC_2429 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D APAC_0473 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APAC_1958 polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D APAC_1959 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D APAC_1427 rppH; RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D APAC_0995 ribonuclease activity regulator, RraA family K02553 rraA; regulator of ribonuclease activity A
D APAC_1533 ribonuclease activity regulator, RraA family K02553 rraA; regulator of ribonuclease activity A
C 03041 Spliceosome
C 03011 Ribosome [BR:apai03011]
D APAC_0311 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D APAC_0558 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D APAC_0794 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D APAC_1099 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D APAC_0805 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D APAC_2279 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D APAC_2094 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D APAC_0802 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D APAC_0178 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D APAC_0787 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D APAC_1098 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D APAC_2095 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D APAC_1097 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D APAC_0801 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D APAC_0359 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D APAC_2079 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D APAC_0797 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D APAC_2277 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D APAC_0792 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D APAC_0191 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D APAC_2535 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D APAC_2138 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D APAC_0791 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D APAC_0788 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D APAC_0789 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D APAC_0800 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D APAC_0803 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D APAC_1240 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D APAC_2137 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D APAC_2139 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D APAC_2136 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D APAC_0179 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D APAC_0798 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D APAC_0806 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D APAC_0795 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D APAC_1101 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D APAC_0804 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D APAC_0340 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D APAC_0200 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D APAC_1896 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D APAC_0793 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D APAC_0790 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D APAC_0799 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D APAC_1895 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D APAC_1729 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D APAC_0796 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D APAC_0104 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D APAC_2247 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D APAC_2143 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D APAC_1914 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D APAC_0201 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D APAC_1096 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D APAC_0735 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D APAC_1716 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
C 03009 Ribosome biogenesis [BR:apai03009]
D APAC_1901 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D APAC_1946 era; GTP-binding protein K03595 era; GTPase
D APAC_1894 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-]
D APAC_0234 dksA1; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D APAC_0489 dksA2; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D APAC_2273 nusA; transcription termination factor K02600 nusA; transcription termination/antitermination protein NusA
D APAC_1834 nusB; transcription antitermination protein K03625 nusB; transcription antitermination protein NusB
D APAC_2140 nusG; transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D APAC_1489 RsuA-like pseudouridine synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D APAC_0078 rsmA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D APAC_0326 rsmE; 16S rRNA m3U1498 methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D APAC_1393 rsmG; 16S rRNA m7G527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D APAC_1375 rsmH; 16S rRNA m4C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D APAC_0103 rsmI; 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D APAC_1858 tlyA; 16S/23S rRNA (cytidine-2'-O)-methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D APAC_0101 rRNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D APAC_0488 SPOUT methyltransferase K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D APAC_1211 SAM-dependent methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D APAC_0082 rlmN; 23S rRNA m2A2503 methyltransferase / tRNA m2A37 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D APAC_0075 rluB; 23S rRNA pseudouridine 2605 synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D APAC_0037 RNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D APAC_1082 rluD; 23S rRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D APAC_2081 rluA; 23S rRNA and tRNA pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D APAC_1622 rluE; 23S rRNA pseudouridine 2457 synthase K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D APAC_0731 rimI; ribosomal-protein-S18-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D APAC_1549 alpha-L-glutamate ligase, RimK family K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D APAC_2421 rimK; ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D APAC_2077 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D APAC_2313 radical SAM methylthiotransferase, MiaB/RimO family K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D APAC_0492 prmA; 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D APAC_2309 Holliday junction resolvase-like protein (UPF0081 domain) K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D APAC_0963 DEAD-box ATP-dependent RNA helicase K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D APAC_0064 DEAD-box ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D APAC_1447 engA; GTP-binding protein K03977 engA; GTPase
D APAC_0742 spoT; ppGpp synthetase / guanosine-3',5'-bis(diphosphate) 3' pyrophosphohydrolase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D APAC_0306 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D APAC_0307 DUF150 domain-containing protein K09748 rimP; ribosome maturation factor RimP
D APAC_0247 rsfS; ribosome silencing factor K09710 ybeB; ribosome-associated protein
D APAC_1673 ybeY; rRNA maturation RNase K07042 ybeY; probable rRNA maturation factor
D APAC_1448 raiA; translation inhibitor protein RaiA K05808 hpf; ribosome hibernation promoting factor
D APAC_0766 ychF; GTP-binding protein, putative GTP-dependent translation factor K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:apai03016]
D APAC_0413 cca; multifunctional tRNA nucleotidyl transferase / 2'3'-cyclic phosphodiesterase / 2'nucleotidase / phosphatase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D APAC_0083 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_1418 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_0411 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D APAC_0547 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D APAC_0423 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D APAC_1411 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D APAC_1986 glutaminyl-tRNA synthetase / YqeY domain fusion protein K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D APAC_0246 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D APAC_0751 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D APAC_0813 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D APAC_0266 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D APAC_0203 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D APAC_0352 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D APAC_2274 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D APAC_0603 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D APAC_0137 hisZ; ATP phosphoribosyltransferase HisG(S)Z, hetero-octameric short form, regulatory subunit K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D APAC_1234 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D APAC_0315 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D APAC_0314 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D APAC_0741 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D APAC_0349 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D APAC_0316 histidine triad nucleotide-binding protein, Hint/PKCI branch K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D APAC_1080 trmI; tRNA m7G46 methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D APAC_2436 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D APAC_0278 truB; tRNA pseudouridine 55 synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D APAC_0235 tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D APAC_0775 truD; tRNA pseudouridine 13 synthase K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D APAC_0680 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APAC_0105 miaA; tRNA(i6A37) synthase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D APAC_1910 mnmE; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, GTPase component K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D APAC_2498 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D APAC_0965 selD; selenophosphate synthetase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D APAC_2085 glyQ; glycyl-tRNA synthetase, alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D APAC_1397 glyS; glycyl-tRNA synthetase, beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D APAC_0902 ybaK; cysteinyl-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D APAC_0491 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D APAC_2271 miaB; isopentenyl-adenosine A37 tRNA methylthiolase K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D APAC_1861 cmoA; carboxy-S-adenosyl-L-methionine synthase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D APAC_1563 cmoB; tRNA (cmo5U34)-carboxymethyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D APAC_2444 trmA; tRNA m5U54 methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D APAC_0339 trmD; tRNA m1G37 methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D APAC_1503 rRNA methylase, SpoU family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D APAC_1692 yfiC; tRNA m6A37 methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D APAC_0516 mnmA1; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D APAC_0517 mnmA2; tRNA U34 2-thiouridylase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D APAC_1462 ttcA; tRNA cytosine32 2-sulfurtransferase K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D APAC_1276 FAD-dependent oxidoreductase, possible FAD-dependent cmnm(5)s(2)U34 oxidoreductase K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D APAC_1523 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D APAC_0323 queC; 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D APAC_0322 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D APAC_0321 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D APAC_0005 queF; 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D APAC_2490 DUF208 domain-containing protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D APAC_2293 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D APAC_1035 thiI; tRNA uridine 4-sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D APAC_2314 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D APAC_0302 tsaB; N6-L-threonylcarbamoyladenine synthase, TsaB subunit K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D APAC_0214 tsaD; N6-L-threonylcarbamoyladenine synthase, TsaD subunit K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D APAC_1544 tsaE; N6-L-threonylcarbamoyladenine synthase, TsaE subunit K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D APAC_0688 tcdA; tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D APAC_2282 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D APAC_1440 pnp; polynucleotide phosphorylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:apai03012]
D APAC_0215 eIF1/SUI1 family translation initiation factor K03113 EIF1; translation initiation factor 1
D APAC_0305 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D APAC_0202 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D APAC_1071 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D APAC_1074 ABC transporter, ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D APAC_0559 tsf; translation elongation factor EF-Ts K02357 tsf; elongation factor Ts
D APAC_2144 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D APAC_2093 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G
D APAC_0956 selB; selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D APAC_0190 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D APAC_2550 frr; ribosome releasing factor K02838 frr; ribosome recycling factor
D APAC_1429 hemK; protein-(glutamine-N5) methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D APAC_0736 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D APAC_0809 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D APAC_0309 efp; translation elongation factor EF-P K02356 efp; elongation factor P
D APAC_0291 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:apai03110]
D APAC_2027 clpA; ATP-dependent protease specificity component and chaperone K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D APAC_1915 clpB; ClpB chaperone K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D APAC_2494 clpX; ATP-dependent protease specificity component and chaperone K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D APAC_1242 hslU; heat shock protein HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D APAC_0925 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D APAC_2429 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D APAC_0473 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APAC_1557 dnaJ; DnaK system heat shock co-chaperone K03686 dnaJ; molecular chaperone DnaJ
D APAC_1274 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein
D APAC_1520 djlA; DnaJ-like membrane chaperone protein K05801 djlA; DnaJ like chaperone protein
D APAC_2430 grpE; DnaK system nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D APAC_2603 heat-shock protein Hsp20 K13993 HSP20; HSP20 family protein
D APAC_0472 groES; 10 kD chaperonin (cpn10) K04078 groES; chaperonin GroES
D APAC_2401 htrA; periplasmic heat shock serine protease HtrA, Do family K04771 degP; serine protease Do [EC:3.4.21.107]
D APAC_0493 ftsH2; integral membrane ATP-dependent zinc metallopeptidase (extracellular domain) K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D APAC_1137 ftsH1; integral membrane ATP-dependent zinc metallopeptidase K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D APAC_0335 atpB; ATP synthase, F0 complex, a subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D APAC_0450 putative periplasmic protein refolding chaperone, Spy/CpxP family (LTXXQ domains) K06006 cpxP; periplasmic protein CpxP/Spy
D APAC_2614 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D APAC_1054 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D APAC_1049 hypB; hydrogenase nickel insertion protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D APAC_2164 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D APAC_1270 putative periplasmic folding chaperone K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D APAC_1109 FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D APAC_1874 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D APAC_0365 peb4; major antigenic peptide / PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D APAC_0937 peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D APAC_1764 peptidyl-prolyl cis-trans isomerase C K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D APAC_0267 trxA; thioredoxin K03671 TXN; thioredoxin
D APAC_0268 thioredoxin K03671 TXN; thioredoxin
D APAC_0502 thioredoxin K03671 TXN; thioredoxin
D APAC_2418 thioredoxin K03671 TXN; thioredoxin
D APAC_1459 thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8]
D APAC_1162 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D APAC_2417 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:apai04131]
D APAC_2245 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D APAC_1838 putative membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D APAC_0131 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APAC_0249 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APAC_2259 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D APAC_0925 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:apai03051]
D APAC_0925 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:apai03032]
D APAC_1662 ribonuclease H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APAC_1767 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APAC_1900 rnhA; ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APAC_1967 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D APAC_1373 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D APAC_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D APAC_0756 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D APAC_1898 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D APAC_2278 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D APAC_2530 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APAC_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APAC_2280 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APAC_1424 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APAC_0525 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_0531 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1304 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1698 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_2239 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APAC_1916 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D APAC_1588 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D APAC_1725 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D APAC_0003 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D APAC_2464 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:apai03036]
D APAC_1901 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D APAC_1373 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D APAC_1274 cbpA; co-chaperone-curved DNA binding protein A K05516 cbpA; curved DNA-binding protein
D APAC_0001 dnaA; chromosomal replication initiator protein K02313 dnaA; chromosomal replication initiator protein
D APAC_1271 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D APAC_1079 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D APAC_2163 ftsI; cell division protein FtsI / penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D APAC_1449 ftsK; DNA segregation ATPase FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D APAC_2162 ftsW; cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D APAC_1078 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D APAC_1272 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D APAC_0739 amiA; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D APAC_0658 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D APAC_2495 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D APAC_2496 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D APAC_1083 rodA; rod shape-determining protein K05837 rodA; rod shape determining protein RodA
D APAC_1889 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein
D APAC_1888 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D APAC_2498 mnmG; 5-carboxymethylaminomethyluridine-tRNA synthase MnmEG, MnmG component K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D APAC_1393 rsmG; 16S rRNA m7G527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D APAC_1434 xerH; integrase / recombinase K04763 xerD; integrase/recombinase XerD
D APAC_0147 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D APAC_1250 engB; ribosome biogenesis GTP-binding protein YsxC/EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:apai03400]
D APAC_1995 ogt; O6-alkylguanine-DNA-alkyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D APAC_1306 phrB; deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D APAC_2568 ung; uracil-DNA glycosylase, family 1 K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D APAC_0699 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D APAC_1990 putative ADP-ribose pyrophosphatase YjhB, Nudix family K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D APAC_1186 deoxyribodipyrimidine photolyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D APAC_0811 uracil-DNA glycosylase, family 4 K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D APAC_0881 xth; exodeoxyribonuclease III (exonuclease III) K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D APAC_2486 nfo; endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D APAC_2524 recJ; single-stranded DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D APAC_1588 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D APAC_1229 uvrA; UvrABC nucleotide excision repair complex, subunit UvrA K03701 uvrA; excinuclease ABC subunit A
D APAC_0696 uvrB; UvrABC nucleotide excision repair complex, subunit UvrB K03702 uvrB; excinuclease ABC subunit B
D APAC_0823 uvrC; UvrABC nucleotide excision repair complex, subunit UvrC K03703 uvrC; excinuclease ABC subunit C
D APAC_0277 UvrD/REP family helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APAC_0585 rep; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D APAC_2135 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D APAC_2134 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D APAC_1100 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D APAC_0743 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D APAC_0448 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D APAC_0504 mutS; DNA mismatch repair ATPase K03555 mutS; DNA mismatch repair protein MutS
D APAC_1141 mutS2; DNA mismatch binding protein, MutS2 family K07456 mutS2; DNA mismatch repair protein MutS2
D APAC_0464 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D APAC_1120 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D APAC_1524 DEDDh 3'-5' exonuclease domain family protein K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-]
D APAC_2530 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D APAC_0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D APAC_2280 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D APAC_1424 holB; DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D APAC_0525 dnaQ1; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_0531 dnaQ2; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1304 DEDDh 3'-5' exonuclease domain family protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_1698 dnaQ3; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D APAC_2239 dnaX; DNA polymerase III, gamma and tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D APAC_2278 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D APAC_0333 addA; AddAB recombination complex, helicase AddA K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D APAC_1269 helicase, RecD/TraA family (non-RecBCD) K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D APAC_2457 recA; recombinase K03553 recA; recombination protein RecA
D APAC_0780 ruvA; RuvABC resolvasome, subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D APAC_2021 ruvB; RuvABC resolvasome, subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D APAC_2626 ruvC; RuvABC resolvasome, subunit RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D APAC_1069 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D APAC_1771 sbcC; DNA repair exonuclease SbcCD, ATPase subunit K03546 sbcC; DNA repair protein SbcC/Rad50
D APAC_1772 sbcD; DNA repair exonuclease SbcCD, nuclease subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D APAC_1671 radA; DNA repair and recombination protein K04485 radA; DNA repair protein RadA/Sms
D APAC_1556 recR; recombination protein K06187 recR; recombination protein RecR
D APAC_2091 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D APAC_2212 cas1; CRISPR/Cas system-associated endonuclease Cas1, type II-C K15342 cas1; CRISP-associated protein Cas1
D APAC_1725 gyrA; DNA gyrase, subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D APAC_0003 gyrB; DNA gyrase, subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D APAC_2464 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D APAC_1373 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D APAC_2221 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D APAC_0622 dinP; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D APAC_2128 hypothetical protein K03565 recX; regulatory protein
D APAC_0039 nrdA; aerobic ribonucleoside-diphosphate reductase Ia, B1 protein subunit NrdA K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D APAC_0040 nrdB; aerobic ribonucleoside-diphosphate reductase Ia, B2 protein subunit NrdB K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D APAC_0299 nrnA; nanoRNase / pAp phosphatase K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:apai03029]
D APAC_0329 petB; ubiquinol cytochrome c oxidoreductase PetABC, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D APAC_0305 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D APAC_0202 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D APAC_0559 tsf; translation elongation factor EF-Ts K02357 tsf; elongation factor Ts
D APAC_2144 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D APAC_2093 fusA; translation elongation factor EF-G K02355 fusA; elongation factor G
D APAC_2443 HELICc and SUV3_C domain-containing protein K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D APAC_1946 era; GTP-binding protein K03595 era; GTPase
D APAC_0741 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D APAC_0423 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D APAC_0813 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D APAC_0246 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D APAC_1102 gatA; Glu-tRNA(Gln) amidotransferase, subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D APAC_0049 gatB; Glu-tRNA(Gln) amidotransferase, subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D APAC_2299 gatC; Glu-tRNA(Gln) amidotransferase, subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D APAC_2278 ssb; single-stranded DNA binding protein K03111 ssb; single-strand DNA-binding protein
D APAC_1421 beta-barrel assembly machinery complex, BamA/YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D APAC_2429 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D APAC_2430 grpE; DnaK system nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE
D APAC_0473 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APAC_0472 groES; 10 kD chaperonin (cpn10) K04078 groES; chaperonin GroES
D APAC_1557 dnaJ; DnaK system heat shock co-chaperone K03686 dnaJ; molecular chaperone DnaJ
D APAC_0680 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D APAC_0147 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D APAC_1912 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APAC_0925 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:apai02000]
D APAC_1680 msbA; lipid A export ATP-binding/permease protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D APAC_1128 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D APAC_1576 ABC transporter, ATP-binding/permease components K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D APAC_2376 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D APAC_1294 ABC transporter, ATP-binding/permease components K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D APAC_1648 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D APAC_0026 modA; molybdenum ABC transporter ModABC, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D APAC_0024 modB; molybdenum ABC transporter ModABC, permease protein K02018 modB; molybdate transport system permease protein
D APAC_0022 modC; molybdenum ABC transporter ModABC, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D APAC_0983 tupA; tungsten ABC transporter TupABC, periplasmic tungstate-binding protein K05772 tupA; tungstate transport system substrate-binding protein
D APAC_0984 tupB; tungsten ABC transporter TupABC, permease protein K05773 tupB; tungstate transport system permease protein
D APAC_0985 tupC; tungsten ABC transporter TupABC, ATP-binding protein K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D APAC_2336 nitrate ABC transporter, substrate-binding protein K15576 nrtA; nitrate/nitrite transport system substrate-binding protein
D APAC_2335 nitrate ABC transporter, permease protein K15577 nrtB; nitrate/nitrite transport system permease protein
D APAC_2334 nitrate ABC transporter, ATP-binding protein K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4]
D APAC_2173 iron(III)/spermidine/putrescine ABC transporter, periplasmic substrate-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D APAC_2174 iron(III)/spermidine/putrescine ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D APAC_2175 iron(III)/spermidine/putrescine ABC transporter, ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D APAC_0835 proX; proline/glycine betaine ABC transporter ProVWX, substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein
D APAC_0833 proW; proline/glycine betaine ABC transporter ProVWX, permease protein ProW K02001 proW; glycine betaine/proline transport system permease protein
D APAC_0832 proV; proline/glycine betaine ABC transporter ProVWX, ATP-binding protein ProV K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D APAC_0375 nitrate/sulfonate/bicarbonate ABC transporter, periplasmic substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D APAC_1289 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D APAC_0376 nitrate/sulfonate/bicarbonate ABC transporter, permease protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D APAC_0377 nitrate/sulfonate/bicarbonate ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D APAC_2388 mlaD; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D APAC_2386 mlaE; lipid asymmetry ABC transporter MlaABCDEF, permease component MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D APAC_2387 mlaF; lipid asymmetry ABC transporter MlaABCDEF, ATPase component MlaF K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D APAC_2389 ABC transporter, auxiliary component K18480 linN; cholesterol transport system auxiliary component
D APAC_1007 mlaC; lipid asymmetry ABC transporter MlaABCDEF, periplasmic component MlaC K07323 mlaC; phospholipid transport system substrate-binding protein
D APAC_0188 pstS; phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein
D APAC_0186 pstC; phosphate ABC transporter, permease protein K02037 pstC; phosphate transport system permease protein
D APAC_0185 pstA; phosphate ABC transporter, permease protein (DUF3333 domain) K02038 pstA; phosphate transport system permease protein
D APAC_0184 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D APAC_1059 livK; high-affinity branched-chain amino acid ABC transporter, periplasmic Leu/Ile/Val-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D APAC_1060 livH; high-affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D APAC_1061 livM; high-affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D APAC_1062 livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D APAC_1063 livF; high-affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D APAC_0864 urtA; urea ABC transporter UrtABCDE, periplasmic substrate-binding protein K11959 urtA; urea transport system substrate-binding protein
D APAC_0865 urtB; urea ABC transporter UrtABCDE, permease protein K11960 urtB; urea transport system permease protein
D APAC_0866 urtC; urea ABC transporter UrtABCDE, permease protein K11961 urtC; urea transport system permease protein
D APAC_0867 urtD; urea ABC transporter UrtABCDE, ATP-binding protein K11962 urtD; urea transport system ATP-binding protein
D APAC_0868 urtE; urea ABC transporter UrtABCDE, ATP-binding protein K11963 urtE; urea transport system ATP-binding protein
D APAC_0373 extracellular solute-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D APAC_0177 extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D APAC_2311 dipeptide/oligopeptide/nickel ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D APAC_1654 ABC transporter, permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D APAC_2152 putative dipeptide/oligopeptide/nickel ABC transporter, ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D APAC_0568 ABC transporter, ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D APAC_0358 ABC transporter, ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D APAC_1482 iron siderophore ABC transporter, periplasmic substrate-binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D APAC_1480 iron siderophore ABC transporter, permease protein K25027 btuC; cobalamin transport system permease protein
D APAC_1481 iron siderophore ABC transporter, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D APAC_0648 metal ion ABC transporter, periplasmic metal-binding protein K09815 znuA; zinc transport system substrate-binding protein
D APAC_0814 periplasmic substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein
D APAC_0574 metal ion ABC transporter, membrane protein K09816 znuB; zinc transport system permease protein
D APAC_0573 metal ion ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D APAC_1046 cbiQ; cobalt/nickel ECF transporter CbiMNQO, T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein
D APAC_1044 cbiM; cobalt/nickel ECF transporter CbiMNQO, S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein
D APAC_1047 cbiO; cobalt/nickel ECF transporter CbiMNQO, A component, ATP-binding protein CbiO K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D APAC_1043 DUF4198 domain-containing protein K10094 cbiK; nickel transport protein
D APAC_1045 cbiN; cobalt/nickel ECF transporter CbiMNQO, S component CbiN K16915 cbiL; nickel transport protein
D APAC_2437 lptF; lipooligosaccharide transport system, ABC transporter permease component LptF K07091 lptF; lipopolysaccharide export system permease protein
D APAC_0737 lptG; lipooligosaccharide transport system, ABC transporter permease component LptG K11720 lptG; lipopolysaccharide export system permease protein
D APAC_1543 lptB; lipooligosaccharide transport system, ABC transporter ATP-binding component LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D APAC_0481 ABC transporter, ATP-binding protein, FtsE/LolD family K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D APAC_1078 ftsX; cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D APAC_1079 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D APAC_0389 PQQ-dependent alcohol dehydrogenase-associated ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D APAC_0388 PQQ-dependent alcohol dehydrogenase-associated ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D APAC_0232 ABC transporter, permease protein, FtsX/LolE family K02004 ABC.CD.P; putative ABC transport system permease protein
D APAC_0482 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D APAC_1282 lolC; lipoprotein releasing system, transmembrane protein, LolC/E family K02004 ABC.CD.P; putative ABC transport system permease protein
D APAC_1344 ABC transporter, permease protein, MacB family K02004 ABC.CD.P; putative ABC transport system permease protein
D APAC_1761 putative lysophospholipase L1-associated ABC transporter, permease protein YbbP K02004 ABC.CD.P; putative ABC transport system permease protein
D APAC_0231 ABC transporter, ATP-binding protein, FtsE/LolD family K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D APAC_0560 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D APAC_1343 ABC transporter, ATP-binding protein, FtsE/LolD family K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D APAC_1760 putative lysophospholipase L1-associated ABC transporter, ATP-binding protein YbbA K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D APAC_0678 sufC; [Fe-S] cluster assembly scaffold SufBCD, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D APAC_1140 sodium:dicarboxylate cotransporter (permease SLC13 domain) K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D APAC_0097 MATE family efflux protein K26937 dinF; MATE family, multidrug efflux pump
D APAC_1212 major facilitator superfamily transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D APAC_2390 drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D APAC_2578 drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D APAC_2579 drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D APAC_2038 proton antiporter protein, major facilitator superfamily K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D APAC_0087 major facilitator superfamily transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D APAC_1728 putative potassium channel protein (TrkA domain) K10716 kch; voltage-gated potassium channel
D APAC_1837 TrkA domain-containing protein K10716 kch; voltage-gated potassium channel
D APAC_1707 ion transporter K08714 VGSC; voltage-gated sodium channel
D APAC_2330 ammonium transporter, marine subtype K03320 amt; ammonium transporter, Amt family
D APAC_2332 ammonium transporter, marine subtype K03320 amt; ammonium transporter, Amt family
D APAC_0554 von Willebrand factor type A (vWA) domain-containing protein (BatA domain), putative oxygen tolerance protein BatA K07114 yfbK; Ca-activated chloride channel homolog
D APAC_1952 von Willebrand factor type A (vWA) domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog
D APAC_2546 BAX inhibitor (BI)-1 like protein (UPF0005 domain) K19416 yccA; modulator of FtsH protease
D APAC_2340 formate/nitrite transporter K21993 fdhC; formate transporter
D APAC_2556 small conductance mechanosensitive channel protein K05802 mscK; potassium-dependent mechanosensitive channel
D APAC_0412 mscS; small conductance mechanosensitive channel protein K03442 mscS; small conductance mechanosensitive channel
D APAC_0627 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D APAC_1938 magnesium/cobalt/nickel transporter, MgtE family K06213 mgtE; magnesium transporter
D APAC_2557 magnesium/cobalt/nickel transporter, MgtE family K06213 mgtE; magnesium transporter
D APAC_2058 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D APAC_1601 OmpA domain-containing protein K02557 motB; chemotaxis protein MotB
D APAC_2057 motBII; flagellar motor stator protein K02557 motB; chemotaxis protein MotB
D APAC_0403 exbB1; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D APAC_1339 exbB2; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D APAC_1495 exbB3; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D APAC_1880 tolQ; Tol-Pal system subunit TolQ K03561 exbB; biopolymer transport protein ExbB
D APAC_0402 exbD1; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D APAC_1338 exbD2; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D APAC_1494 exbD3; TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D APAC_1879 tolR; Tol-Pal system subunit TolR K03559 exbD; biopolymer transport protein ExbD
D APAC_2558 zinc transporter (EcCorA_ZntB-like family) K16074 zntB; zinc transporter
D APAC_0244 crcB; putative fluoride ion transporter K06199 crcB; fluoride exporter
D APAC_0967 putative mercuric transport protein MerT K08363 merT; mercuric ion transport protein
D APAC_0968 heavy-metal-associated domain-containing protein, putative mercuric reductase K08364 merP; periplasmic mercuric ion binding protein
D APAC_1225 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D APAC_0505 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D APAC_0045 OmpA domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D APAC_0513 OmpA domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D APAC_0514 cadF; outer membrane fibronectin-binding protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D APAC_1583 OmpA domain-containing protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D APAC_2215 von Willebrand factor type A (vWA) domain-containing protein (OmpA domain) K03286 TC.OOP; OmpA-OmpF porin, OOP family
D APAC_1483 TonB-dependent receptor K16092 btuB; vitamin B12 transporter
D APAC_1349 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D APAC_0720 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D APAC_0090 outer membrane efflux protein, TolC family, putative CusC K15725 czcC; outer membrane protein, heavy metal efflux system
D APAC_0641 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_0660 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1341 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1793 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1127 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D APAC_1579 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D APAC_2377 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D APAC_0716 hypothetical protein K01991 wza; polysaccharide biosynthesis/export protein
D APAC_1421 beta-barrel assembly machinery complex, BamA/YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D APAC_0614 beta-barrel assembly machinery complex, BamD/YfiO lipoprotein K05807 bamD; outer membrane protein assembly factor BamD
D APAC_1249 lptA; lipooligosaccharide transport system, periplasmic component LptA K09774 lptA; lipopolysaccharide export system protein LptA
D APAC_1442 lptD; lipooligosaccharide transport system, OM translocon component LptD K04744 lptD; LPS-assembly protein
D APAC_2513 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D APAC_1630 divalent metal cation transporter (ZT_dimer domain) K13283 fieF; ferrous-iron efflux pump FieF
D APAC_0092 CusA family copper/silver efflux pump K07787 cusA; copper/silver efflux system protein
D APAC_0643 RND family efflux system, inner membrane transporter, AcrB family K18303 mexK; multidrug efflux pump
D APAC_0474 QacE family quaternary ammonium compound efflux SMR transporter K11741 sugE; quaternary ammonium compound-resistance protein SugE
D APAC_0840 lctP; L-lactate permease K03303 lutP; lactate permease
D APAC_2275 BCCT (betaine/carnitine/choline) family transporter K02168 betT; choline/glycine/proline betaine transport protein
D APAC_1477 tellurite-resistance/dicarboxylate transporter (TDT) family protein K03304 tehA; tellurite resistance protein
D APAC_1674 calcium:sodium antiporter K07301 yrbG; cation:H+ antiporter
D APAC_0527 actP1; acetate permease K14393 actP; cation/acetate symporter
D APAC_0529 actP2; acetate permease K14393 actP; cation/acetate symporter
D APAC_0533 cation:acetate symporter K14393 actP; cation/acetate symporter
D APAC_0646 nhaA1; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D APAC_0666 nhaA2; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D APAC_2286 nhaA3; sodium:proton antiporter K03313 nhaA; Na+:H+ antiporter, NhaA family
D APAC_0429 glutathione-regulated potassium-efflux system protein, KefB/KefC family K03455 KEA1_2_3; K+:H+ antiporter
D APAC_0993 glutathione-regulated potassium-efflux system protein, KefB/KefC family K03455 KEA1_2_3; K+:H+ antiporter
D APAC_1711 xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D APAC_0269 sodium:sulfate symporter family protein K11106 ttdT; L-tartrate/succinate antiporter
D APAC_2362 chromate transporter K07240 chrA; chromate transporter
D APAC_1446 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D APAC_2354 sulfate permease K03321 TC.SULP; sulfate permease, SulP family
D APAC_1755 TRAP transporter, substrate binding protein, DctP family K11688 dctP; C4-dicarboxylate-binding protein DctP
D APAC_1756 TRAP transporter, small permease subunit K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D APAC_1757 TRAP transporter, large permease subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D APAC_1500 sodium:phosphate symporter K03324 yjbB; phosphate:Na+ symporter
D APAC_2366 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D APAC_1679 murJ; lipid II flippase K03980 murJ; putative peptidoglycan lipid II flippase
D APAC_0891 putative permease K13936 mdcF; malonate transporter and related proteins
D APAC_0066 permease K24180 mleP; malate permease and related proteins
D APAC_1164 putative permease K24180 mleP; malate permease and related proteins
D APAC_1190 putative permease K24180 mleP; malate permease and related proteins
D APAC_1891 putative permease K24180 mleP; malate permease and related proteins
D APAC_2415 MarC family membrane protein K05595 marC; multiple antibiotic resistance protein
D APAC_2162 ftsW; cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D APAC_1838 putative membrane protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D APAC_0434 nickel/cobalt ABC transporter, permease protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D APAC_0649 metal ion ABC transporter, permease protein K08970 rcnA; nickel/cobalt transporter (NicO) family protein
D APAC_1085 TonB domain-containing protein K03832 tonB; periplasmic protein TonB
D APAC_1340 tonB2; energy transduction protein TonB K03832 tonB; periplasmic protein TonB
D APAC_1493 tonB3; energy transduction protein TonB K03832 tonB; periplasmic protein TonB
D APAC_1878 tolA; Tol-Pal system subunit TolA K03832 tonB; periplasmic protein TonB
D APAC_1876 pal; Tol-Pal system peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D APAC_1877 tolB; Tol-Pal system translocation protein TolB K03641 tolB; TolB protein
D APAC_1406 oadB; oxaloacetate decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D APAC_1408 oadG; oxaloacetate decarboxylase, gamma subunit K01573 oadG; oxaloacetate decarboxylase (Na+ extruding) subunit gamma
D APAC_0091 putative copper/silver efflux system, membrane fusion protein CusB K07798 cusB; membrane fusion protein, copper/silver efflux system
D APAC_2375 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D APAC_1126 type I secretion system membrane fusion protein, HlyD family (PAS domain) K12542 lapC; membrane fusion protein, adhesin transport system
D APAC_1575 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D APAC_0642 RND family efflux system, membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D APAC_0658 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D APAC_1795 RND family efflux system, membrane fusion protein K07799 mdtA; membrane fusion protein, multidrug efflux system
D APAC_1618 pnuC; nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D APAC_2006 feoA; ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D APAC_2007 feoB; ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
C 02044 Secretion system [BR:apai02044]
D APAC_0641 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_0660 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1341 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1793 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1128 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D APAC_1576 ABC transporter, ATP-binding/permease components K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D APAC_2376 type I secretion system ATPase/permease, LssB family K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D APAC_2375 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D APAC_1126 type I secretion system membrane fusion protein, HlyD family (PAS domain) K12542 lapC; membrane fusion protein, adhesin transport system
D APAC_1575 type I secretion system membrane fusion protein, HlyD family K12542 lapC; membrane fusion protein, adhesin transport system
D APAC_1127 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D APAC_1579 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D APAC_2377 type I secretion system outer membrane protein, TolC family K12543 lapE; outer membrane protein, adhesin transport system
D APAC_1817 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D
D APAC_1848 type II secretion/transformation system, D protein K02453 gspD; general secretion pathway protein D
D APAC_1847 type II secretion/transformation system, E protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D APAC_1941 type II secretion/transformation system, E protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D APAC_1940 type II secretion/transformation system, F protein K02455 gspF; general secretion pathway protein F
D APAC_0757 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G
D APAC_1856 type II secretion/transformation system, G protein K02456 gspG; general secretion pathway protein G
D APAC_2438 peptidase A24 N-terminal domain-containing protein, putative prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D APAC_1417 YggT family membrane protein K02221 yggT; YggT family protein
D APAC_2561 competence protein, ComEA family K02237 comEA; competence protein ComEA
D APAC_0061 deoxycytidylate deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D APAC_1528 competence protein, ComEC family K02238 comEC; competence protein ComEC
D APAC_0511 ctsW; transformation system, predicted amidophosphoribosyltransferase CtsW K02242 comFC; competence protein ComFC
D APAC_2042 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component K02400 flhA; flagellar biosynthesis protein FlhA
D APAC_2046 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component K02401 flhB; flagellar biosynthesis protein FlhB
D APAC_1263 FlhB C-terminus-related protein K04061 flhB2; flagellar biosynthesis protein
D APAC_2069 fliF; flagellar inner membrane MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D APAC_2067 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component K02411 fliH; flagellar assembly protein FliH
D APAC_2044 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D APAC_2059 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN
D APAC_2066 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN
D APAC_1260 fliP; flagellar export apparatus, transmembrane gate complex, FliP component K02419 fliP; flagellar biosynthesis protein FliP
D APAC_2324 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component K02420 fliQ; flagellar biosynthesis protein FliQ
D APAC_2047 fliR; flagellar export apparatus, transmembrane gate complex, FliR component K02421 fliR; flagellar biosynthesis protein FliR
D APAC_1162 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D APAC_1283 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D APAC_0418 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D APAC_2141 secE; preprotein translocase SecYEG, SecE subunit K03073 secE; preprotein translocase subunit SecE
D APAC_0419 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D APAC_2549 secG; preprotein translocase SecYEG, SecG subunit K03075 secG; preprotein translocase subunit SecG
D APAC_0807 secY; preprotein translocase SecYEG, SecY subunit K03076 secY; preprotein translocase subunit SecY
D APAC_2080 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D APAC_1659 ftsY; cell division protein FtsY K03110 ftsY; fused signal recognition particle receptor
D APAC_0417 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D APAC_1912 oxaA; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D APAC_0245 twin arginine translocation system, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D APAC_1521 tatB; twin arginine translocation system, TatB protein K03117 tatB; sec-independent protein translocase protein TatB
D APAC_1522 tatC; twin arginine translocation system, TatC protein K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:apai02042]
D APAC_1818 zonula occludens toxin (Zot) family protein K10954 zot; zona occludens toxin
D APAC_1225 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
D APAC_0505 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:apai02022]
D APAC_0180 phoR; two-component system sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D APAC_1299 dccR; two-component system response regulator K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D APAC_0894 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_1147 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_2359 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_0086 two-component system sensor histidine kinase, putative CusS K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_0363 cosS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_0452 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_0668 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_1300 dccS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_1498 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_1703 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_2403 cprS; two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_2616 two-component system sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D APAC_0055 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D APAC_0085 two-component system response regulator, putative CusR K02483 K02483; two-component system, OmpR family, response regulator
D APAC_0364 cosR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D APAC_0451 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D APAC_0667 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D APAC_0828 signal transduction response regulator K02483 K02483; two-component system, OmpR family, response regulator
D APAC_1704 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D APAC_2402 cprR; two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D APAC_2615 two-component system response regulator K02483 K02483; two-component system, OmpR family, response regulator
D APAC_0765 signal transduction sensor histidine kinase K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3]
D APAC_0458 PAS sensor-containing two-component system histidine kinase K02491 kinA; two-component system, sporulation sensor kinase A [EC:2.7.13.3]
D APAC_0270 two-component system sensor histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D APAC_1309 two-component system sensor histidine kinase, LytS/YehU family K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D APAC_1310 two-component system response regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator
D APAC_0893 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_0970 two-component system sensor histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_1778 Cache sensor-containing two-component system histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_2339 two-component system sensor histidine kinase (DUF3365 domain) K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D APAC_1438 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D APAC_1189 signal transduction response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_1439 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_2073 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_1435 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D APAC_0687 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D APAC_0763 two-component system response regulator c-di-GMP phosphodiesterase, RpfG family K13815 rpfG; two-component system, response regulator RpfG
D APAC_0621 signal transduction sensor histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D APAC_0911 7TMR-DISM-7TM/7TMR-DISMED2 domain-containing two-component system sensor histidine kinase K20971 ladS; two-component system, sensor histidine kinase LadS
D APAC_0850 two-component system sensor histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D APAC_0950 two-component system sensor histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
D APAC_1170 two-component system sensor histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:apai02035]
D APAC_1438 cheA; chemotaxis sensory histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D APAC_0465 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D APAC_1188 cheC; response regulator phosphatase K03410 cheC; chemotaxis protein CheC
D APAC_1436 cheD; chemotaxis protein CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D APAC_1437 cheR; MCP protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D APAC_1435 cheB; MCP protein-glutamate methylesterase (signal receiver domain) K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D APAC_1189 signal transduction response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_1439 cheY1; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_2073 cheY2; chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D APAC_0687 cheV; chemotaxis signal transduction protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D APAC_0779 MCP-domain signal transduction protein (DUF3365 domain) K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0029 PAS sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0348 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0379 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_0639 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1149 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1292 NIT sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1475 Cache sensor-containing MCP-domain signal transduction protein (chemoreceptor zinc-binding domain) K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1491 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_1587 MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_2090 Cache sensor-containing MCP-domain signal transduction protein K03406 mcp; methyl-accepting chemotaxis protein
D APAC_2067 fliH; flagellar export apparatus, cytoplasmic ATPase complex, FliH component K02411 fliH; flagellar assembly protein FliH
D APAC_2044 fliI; flagellar export apparatus, cytoplasmic ATPase complex, FliI component K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D APAC_1260 fliP; flagellar export apparatus, transmembrane gate complex, FliP component K02419 fliP; flagellar biosynthesis protein FliP
D APAC_2324 fliQ; flagellar export apparatus, transmembrane gate complex, FliQ component K02420 fliQ; flagellar biosynthesis protein FliQ
D APAC_2047 fliR; flagellar export apparatus, transmembrane gate complex, FliR component K02421 fliR; flagellar biosynthesis protein FliR
D APAC_2042 flhA; flagellar export apparatus, transmembrane gate complex, FlhA component K02400 flhA; flagellar biosynthesis protein FlhA
D APAC_2046 flhB; flagellar export apparatus, transmembrane gate complex, FlhB component K02401 flhB; flagellar biosynthesis protein FlhB
D APAC_2068 fliG; flagellar motor switch C-ring protein FliG K02410 fliG; flagellar motor switch protein FliG
D APAC_2327 fliM; flagellar motor switch C-ring protein FliM K02416 fliM; flagellar motor switch protein FliM
D APAC_2059 fliY; flagellar motor switch C-ring protein FliY K02417 fliN; flagellar motor switch protein FliN
D APAC_2066 fliN; flagellar motor switch C-ring protein FliN K02417 fliN; flagellar motor switch protein FliN
D APAC_2069 fliF; flagellar inner membrane MS-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D APAC_2326 flgI; flagellar peptidoglycan-localized P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D APAC_2319 flgH; flagellar outer membrane L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D APAC_2321 fliL; flagellar motor-associated protein FliL K02415 fliL; flagellar protein FliL
D APAC_2050 fliE; flagellar proximal rod protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D APAC_2070 flgB; flagellar proximal rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D APAC_2049 flgC; flagellar proximal rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D APAC_2065 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D APAC_2071 flgG; flagellar distal rod protein FlgG K02391 flgF; flagellar basal-body rod protein FlgF
D APAC_2074 flgF; flagellar distal rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG
D APAC_2056 putative flagellar rod assembly protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D APAC_2063 flgE2; flagellar hook protein, epsilonproteobacterial variant K02390 flgE; flagellar hook protein FlgE
D APAC_2064 flgE; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D APAC_2318 flgK; proximal flagellar hook-filament junction protein K02396 flgK; flagellar hook-associated protein 1
D APAC_2043 flgL; distal flagellar hook-filament junction protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D APAC_1302 putative flagellar protein K02406 fliC; flagellin
D APAC_2445 flaA; flagellin K02406 fliC; flagellin
D APAC_2446 flaB; flagellin K02406 fliC; flagellin
D APAC_2317 fliD; flagellar filament cap protein K02407 fliD; flagellar hook-associated protein 2
D APAC_2316 fliS; flagellar chaperone FliS K02422 fliS; flagellar secretion chaperone FliS
D APAC_2058 motAII; flagellar motor stator protein K02556 motA; chemotaxis protein MotA
D APAC_1601 OmpA domain-containing protein K02557 motB; chemotaxis protein MotB
D APAC_2057 motBII; flagellar motor stator protein K02557 motB; chemotaxis protein MotB
D APAC_1265 putative flagellin level sensor protein FliW K13626 fliW; flagellar assembly factor FliW
D APAC_2281 fliW; putative flagellin level sensor protein FliW K13626 fliW; flagellar assembly factor FliW
D APAC_2053 flhF; polar flagellar biogenesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D APAC_2052 flhG; polar flagellar biogenesis regulatory protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D APAC_2438 peptidase A24 N-terminal domain-containing protein, putative prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:apai04812]
D APAC_0571 AmmeMemoRadiSam system protein B K06990 MEMO1; MEMO1 family protein
D APAC_2495 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D APAC_1272 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D APAC_1271 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D APAC_1889 parA; chromosome partitioning protein K03496 parA; chromosome partitioning protein
D APAC_1888 parB; chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:apai04147]
D APAC_0925 htpG; chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D APAC_2458 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D APAC_0131 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APAC_0249 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D APAC_0250 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D APAC_2259 pykF; pyruvate kinase I K00873 PK; pyruvate kinase [EC:2.7.1.40]
D APAC_2243 ahpC; alkyl hydroperoxide reductase protein, peroxidase component K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D APAC_0473 groEL; 60 kD chaperonin (cpn60) K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D APAC_2429 dnaK; DnaK system heat shock chaperone K04043 dnaK; molecular chaperone DnaK
D APAC_1871 pgi; phosphoglucose isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D APAC_1103 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D APAC_2144 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D APAC_0316 histidine triad nucleotide-binding protein, Hint/PKCI branch K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D APAC_0818 adkII; adenylate kinase (lid-domain-containing Adk) K00939 adk; adenylate kinase [EC:2.7.4.3]
D APAC_0819 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D APAC_0759 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D APAC_0686 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D APAC_1547 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D APAC_1413 fbp; fructose-1,6-bisphosphatase I K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D APAC_2154 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D APAC_1391 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D APAC_0310 serA; alpha-ketoglutarate reductase / D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D APAC_1934 purH; AICAR transformylase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D APAC_2294 lpdA; pyruvate dehydrogenase multienzyme complex, E3 component dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D APAC_2015 zwf; glucose 6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D APAC_0251 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D APAC_1040 lipocalin domain-containing protein K03098 APOD; apolipoprotein D and lipocalin family protein
D APAC_1196 lipocalin domain-containing protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:apai02048]
D APAC_2212 cas1; CRISPR/Cas system-associated endonuclease Cas1, type II-C K15342 cas1; CRISP-associated protein Cas1
D APAC_2211 cas2; CRISPR/Cas system-associated endoribonuclease Cas2, type II-C K09951 cas2; CRISPR-associated protein Cas2
D APAC_2213 cas9; CRISPR/Cas system-associated RNA-guided endonuclease Cas9, type II-C K09952 csn1; CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
D APAC_1358 hsdR1; type I restriction/modification system, restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D APAC_1807 hsdR2; type I restriction/modification system, restriction subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D APAC_1356 hsdS1; type I restriction/modification system, specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D APAC_1812 hsdS2; type I restriction/modification system, specificity subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D APAC_1355 hsdM1; type I restriction/modification system, methylation subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D APAC_1813 hsdM2; type I restriction/modification system, methylation subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D APAC_0440 type II DNA methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D APAC_0924 type III restriction/modification system, restriction subunit K01156 res; type III restriction enzyme [EC:3.1.21.5]
D APAC_0923 type III restriction/modification system, modification subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D APAC_0861 toxin-antitoxin system, toxin component, MazF/PemK family K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D APAC_0703 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D APAC_0729 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D APAC_0725 toxin-antitoxin system, toxin component, RelE/ParE family K06218 relE; mRNA interferase RelE/StbE
D APAC_0870 toxin-antitoxin system, toxin component, RelE/ParE family K06218 relE; mRNA interferase RelE/StbE
D APAC_1325 toxin-antitoxin system, toxin component, RelE/ParE family K06218 relE; mRNA interferase RelE/StbE
D APAC_0724 hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D APAC_0869 toxin-antitoxin system, antitoxin component, Phd/YefM family K18923 stbD; antitoxin StbD
D APAC_1664 toxin-antitoxin system, toxin component, Txe/YoeB family K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D APAC_1665 toxin-antitoxin system, antitoxin component, Phd/YefM family K19159 yefM; antitoxin YefM
D APAC_0722 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D APAC_1156 toxin-antitoxin system, toxin component, HipA family K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D APAC_0862 plasmid maintenance protein CcdB K19163 ccdB; toxin CcdB
D APAC_0863 post-segregation antitoxin CcdA K19164 ccdA; antitoxin CcdA
D APAC_1272 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D APAC_2495 mrdB; cell wall shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D APAC_0083 gltX1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_1418 gltX2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D APAC_0680 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:apai01504]
D APAC_2038 proton antiporter protein, major facilitator superfamily K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D APAC_0894 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_1147 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_2359 two-component system response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D APAC_0658 RND family efflux system, membrane fusion protein K03585 acrA; membrane fusion protein, multidrug efflux system
D APAC_0642 RND family efflux system, membrane fusion protein K18302 mexJ; membrane fusion protein, multidrug efflux system
D APAC_0643 RND family efflux system, inner membrane transporter, AcrB family K18303 mexK; multidrug efflux pump
D APAC_0641 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_0660 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1341 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
D APAC_1793 RND family efflux system, outer membrane channel protein, TolC family K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:apai03100]
D APAC_1714 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APAC_2167 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APAC_2540 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D APAC_0221 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APAC_0224 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APAC_0110 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D APAC_1718 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APAC_1719 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APAC_1720 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D APAC_0537 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APAC_0541 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D APAC_2397 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D APAC_0948 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APAC_1786 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D APAC_0539 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APAC_0543 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APAC_1130 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D APAC_0223 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APAC_0225 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APAC_1790 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APAC_2145 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D APAC_0220 tRNA-His K14226 tRNA-His; tRNA His
D APAC_1715 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APAC_2168 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APAC_2541 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D APAC_0222 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APAC_1372 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APAC_0945 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APAC_2399 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D APAC_0540 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APAC_0544 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D APAC_1401 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_1831 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_1788 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_1789 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_1402 tRNA-Met K14230 tRNA-Met; tRNA Met
D APAC_0946 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D APAC_2148 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D APAC_0837 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D APAC_0219 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D APAC_2398 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D APAC_2147 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APAC_1400 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APAC_1787 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D APAC_2142 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D APAC_0947 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D APAC_2146 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D APAC_0538 tRNA-Val K14237 tRNA-Val; tRNA Val
D APAC_0542 tRNA-Val K14237 tRNA-Val; tRNA Val
D APAC_0958 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D APAC_1716 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D APAC_1213 short-chain dehydrogenase/reductase K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D APAC_1602 glucose/sorbosone dehydrogenase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D APAC_0392 pqqC; pyrroloquinoline-quinone synthase K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11]
D APAC_1316 coxS; aerobic-type carbon monoxide dehydrogenase, small subunit K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D APAC_1315 coxL; aerobic-type carbon monoxide dehydrogenase, large subunit K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D APAC_1962 saccharopine dehydrogenase-like protein K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D APAC_1177 putative NAD/FAD-dependent oxidoreductase K18208 RNLS; renalase [EC:1.6.3.5]
D APAC_1064 old yellow enzyme (OYE)-related FMN binding domain-containing protein K00354 E1.6.99.1; NADPH2 dehydrogenase [EC:1.6.99.1]
D APAC_2564 msrA2; S-isomer-specific methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D APAC_1922 msrA1; S-isomer-specific methionine sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D APAC_1928 msrB1; R-isomer-specific methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D APAC_2565 msrB2; R-isomer-specific methionine sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D APAC_0583 yedY; periplasmic DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D APAC_0257 ccpA; periplasmic diheme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D APAC_0636 diheme cytochrome c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D APAC_1862 bcp; thiol peroxidase K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D APAC_0582 tpx; lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D APAC_0036 [Ni-Fe] hydrogenase, large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1]
D APAC_1020 hyaB; [Ni-Fe] hydrogenase, large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1]
D APAC_1019 hyaA; [Ni-Fe] hydrogenase, small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D APAC_0132 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D APAC_0479 putative membrane protein K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
D APAC_1219 sodN; superoxide dismutase (Ni) K00518 sodN; nickel superoxide dismutase [EC:1.15.1.1]
D APAC_0773 superoxide reductase-like protein K05919 dfx; superoxide reductase [EC:1.15.1.2]
D APAC_0897 nonheme-containing ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D APAC_1267 arsenate reductase (ArsC) family protein K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D APAC_2363 arsC1; arsenate reductase, LMWPc family K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D APAC_2364 arsC2; arsenate reductase, LMWPc family K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D APAC_0394 pqqE; glutamate-tyrosine ligase K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4]
D APAC_1193 cfa; cyclopropane fatty acyl phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D APAC_0416 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D APAC_1490 aat1; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D APAC_2025 aat2; leucyl, phenylalanyl-tRNA-protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D APAC_2010 ate; arginyltransferase K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D APAC_2016 sucrose phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352]
D APAC_0713 glycosyltransferase, family 4 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D APAC_1217 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D APAC_1536 lgt; phosphatidylglycerol-prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D APAC_0654 YdiU family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D APAC_1672 thioesterase K18700 flK; fluoroacetyl-CoA thioesterase [EC:3.1.2.29]
D APAC_1472 acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D APAC_1909 sixA; phosphohistidine phosphatase K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D APAC_1244 tatD; ssDNA/RNA exonuclease, 3' - 5' specific K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D APAC_1949 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D APAC_1897 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D APAC_2214 reactive intermediate/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D APAC_0557 MoxR-like ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D APAC_0213 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D APAC_0216 carbohydrate kinase, YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D APAC_0468 ppiBII; peptidyl-prolyl cis-trans isomerase B (WD40 domain-containing) K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D APAC_0758 lig; DNA ligase K26441 lig; DNA ligase [EC:6.5.1.1]
C 99981 Carbohydrate metabolism
D APAC_1599 putative sugar fermentation stimulation protein SfsA K06206 sfsA; sugar fermentation stimulation protein A
D APAC_0670 CBS domain-containing protein K04767 acuB; acetoin utilization protein AcuB
D APAC_0059 lutA; L-lactate utilization protein LutA K18928 lldE; L-lactate dehydrogenase complex protein LldE
D APAC_0058 lutB; L-lactate utilization protein LutB K18929 lldF; L-lactate dehydrogenase complex protein LldF
D APAC_0057 lutC; L-lactate utilization protein LutC K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D APAC_0978 fdhD; formate dehydrogenase accessory protein K02379 fdhD; FdhD protein
D APAC_0681 iscU; [Fe-S] cluster assembly scaffold protein K13819 K13819; NifU-like protein
D APAC_2004 fldA; flavodoxin K03839 fldA; flavodoxin I
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D APAC_1687 type III pyridoxal 5-phosphate (PLP)-dependent enzyme, YggS family K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D APAC_1899 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
D APAC_0711 glycosyltransferase, family 25 K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D APAC_1178 putative ubiquinone biosynthesis protein kinase K03688 ubiB; ubiquinone biosynthesis protein
D APAC_1414 mobB; molybdenum cofactor guanylyltransferase protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
D APAC_0943 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D APAC_0618 putative membrane protein, DoxX family K15977 K15977; putative oxidoreductase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D APAC_2396 cold shock protein K03704 cspA; cold shock protein
D APAC_2208 transcriptional accessory protein Tex K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D APAC_2028 clpS; ClpAP chaperone-protease complex specificity factor K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D APAC_1951 tig; trigger factor (peptidyl-prolyl cis/trans isomerase, chaperone) K03545 tig; trigger factor
D APAC_0584 yedZ; periplasmic DMSO/TMAO reductase YedYZ, heme-binding membrane subunit K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D APAC_0875 ureE; urease accessory protein UreE K03187 ureE; urease accessory protein
D APAC_0876 ureF; urease accessory protein UreF K03188 ureF; urease accessory protein
D APAC_0877 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D APAC_0872 ureD; urease accessory protein UreD K03190 ureD; urease accessory protein
D APAC_0280 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D APAC_1050 hypC; hydrogenase assembly chaperone HypC K04653 hypC; hydrogenase expression/formation protein HypC
D APAC_1051 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D APAC_1053 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D APAC_1025 hypF; [Ni-Fe] hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D APAC_1947 magnesium chelatase-related protein K07391 comM; magnesium chelatase family protein
D APAC_2205 2OG-Fe(II) oxygenase family protein K07394 K07394; SM-20-related protein
D APAC_1314 coxF; dehydrogenase maturation factor (XdhC/CoxI/CoxF family) K07402 xdhC; xanthine dehydrogenase accessory factor
C 99976 Replication and repair
D APAC_1468 rmuC; DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D APAC_0460 magIII; 3-methyladenine DNA glycosylase K07457 K07457; endonuclease III related protein
D APAC_2263 UPF0102 domain-containing protein K07460 yraN; putative endonuclease
D APAC_2285 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D APAC_0074 rarA; recombination factor protein RarA K07478 ycaJ; putative ATPase
D APAC_1238 resolvase K14060 pinR; putative DNA-invertase from lambdoid prophage Rac
D APAC_0035 IS3 family transposase orfA K07483 K07483; transposase
D APAC_0369 IS3 family transposase orfA K07483 K07483; transposase
D APAC_1286 IS3 family transposase orfA K07483 K07483; transposase
D APAC_1592 IS3 family transposase orfA K07483 K07483; transposase
D APAC_1612 IS3 family transposase orfA K07483 K07483; transposase
D APAC_1797 IS3 family transposase orfA K07483 K07483; transposase
D APAC_2380 IS3 family transposase orfA K07483 K07483; transposase
D APAC_2506 IS3 family transposase orfA K07483 K07483; transposase
D APAC_2516 IS3 family transposase orfA K07483 K07483; transposase
D APAC_0088 transposase, IS110 family K07486 K07486; transposase
D APAC_0432 transposase, IS110 family K07486 K07486; transposase
D APAC_0623 transposase, IS110 family K07486 K07486; transposase
D APAC_0663 transposase, IS110 family K07486 K07486; transposase
D APAC_0987 transposase, IS110 family K07486 K07486; transposase
D APAC_1014 transposase, IS110 family K07486 K07486; transposase
D APAC_1639 transposase, IS110 family K07486 K07486; transposase
D APAC_1042 hypothetical protein K07488 K07488; transposase
D APAC_0580 transposase, IS200 family K07491 rayT; REP-associated tyrosine transposase
D APAC_1031 transposase K07491 rayT; REP-associated tyrosine transposase
D APAC_0010 transposase, IS256 family K07493 K07493; putative transposase
D APAC_1055 transposase, IS256 family K07493 K07493; putative transposase
D APAC_2124 transposase, IS256 family K07493 K07493; putative transposase
D APAC_2210 transposase, IS256 family K07493 K07493; putative transposase
D APAC_2504 transposase, IS256 family K07493 K07493; putative transposase
D APAC_2517 transposase, IS256 family K07493 K07493; putative transposase
D APAC_0370 IS3 family transposase orfB K07497 K07497; putative transposase
D APAC_1287 IS3 family transposase orfB K07497 K07497; putative transposase
D APAC_1591 IS3 family transposase orfB K07497 K07497; putative transposase
D APAC_1613 IS3 family transposase orfB K07497 K07497; putative transposase
D APAC_1796 IS3 family transposase orfB K07497 K07497; putative transposase
D APAC_2379 IS3 family transposase orfB K07497 K07497; putative transposase
D APAC_2505 IS3 family transposase orfB K07497 K07497; putative transposase
D APAC_2515 IS3 family transposase orfB K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D APAC_0470 YbaB/EbfC DNA-binding family protein K09747 ebfC; nucleoid-associated protein EbfC
D APAC_2582 cryptochrome, DASH family K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D APAC_1197 major facilitator superfamily transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D APAC_0659 RND family efflux system, inner membrane transporter, AcrB family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D APAC_1794 RND family efflux system, inner membrane transporter, AcrB family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D APAC_0065 inorganic phosphate transporter, PitA family K03306 TC.PIT; inorganic phosphate transporter, PiT family
D APAC_0892 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D APAC_1911 Jag domain-containing protein K06346 jag; spoIIIJ-associated protein
C 99993 Cell motility
C 99995 Signaling proteins
D APAC_2609 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D APAC_0072 putative ribonuclease, YlaK/PhoH family K07175 phoH2; PhoH-like ATPase
D APAC_0941 putative ribonuclease, YlaK/PhoH family K07175 phoH2; PhoH-like ATPase
D APAC_0526 cAMP-binding nucleotidyltransferase (CBS domain) K07182 K07182; CBS domain-containing protein
D APAC_0532 cAMP-binding nucleotidyltransferase (CBS domain) K07182 K07182; CBS domain-containing protein
D APAC_1706 putative YajQ-like nucleotide-binding protein (DUF520 domain) K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D APAC_1284 lolA; periplasmic outer membrane-specific lipoprotein chaperone K03634 lolA; outer membrane lipoprotein carrier protein
D APAC_1008 mlaA; lipid asymmetry ABC transporter MlaABCDEF, lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA
D APAC_1041 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein
D APAC_1342 RND family efflux system, membrane fusion protein K02005 ABC.CD.TX; HlyD family secretion protein
D APAC_1218 putative autoinducer 2 (AI-2E family) transporter K11744 tqsA; AI-2 transport protein TqsA
D APAC_1293 putative autoinducer 2 (AI-2E family) transporter K11744 tqsA; AI-2 transport protein TqsA
D APAC_2385 pheromone autoinducer 2 transporter K11744 tqsA; AI-2 transport protein TqsA
C 99994 Others
D APAC_0183 phoU; phosphate transport system regulatory protein K02039 phoU; phosphate transport system protein
D APAC_1518 BFD-like [2Fe-2S]-binding domain-containing protein K02192 bfd; bacterioferritin-associated ferredoxin
D APAC_1519 BFD-like [2Fe-2S]-binding domain-containing protein K02192 bfd; bacterioferritin-associated ferredoxin
D APAC_0217 putative CutA divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein
D APAC_0653 hemerythrin K07216 hr; hemerythrin
D APAC_2589 hemerythrin (two domain) K07216 hr; hemerythrin
D APAC_0632 imelysin-like iron-regulated protein A-like protein, IrpA family K07231 K07231; putative iron-regulated protein
D APAC_1486 hypothetical protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D APAC_0752 CvpA family membrane protein K03558 cvpA; membrane protein required for colicin V production
D APAC_0126 putative FlgJ-related protein (Bax domain) K03796 bax; Bax protein
D APAC_0391 pqqB; pyrroloquinoline quinone biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B
D APAC_0393 pqqD; PqqA peptide chaperone K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D
D APAC_0906 globin K06886 glbN; hemoglobin
D APAC_0645 Patatin-like phospholipase K07001 K07001; NTE family protein
D APAC_2529 Patatin-like phospholipase K07001 K07001; NTE family protein
D APAC_0679 sufB; [Fe-S] cluster assembly scaffold SufBCD, SufB protein K09014 sufB; Fe-S cluster assembly protein SufB
D APAC_0677 sufD; [Fe-S] cluster assembly scaffold SufBCD, SufD protein K09015 sufD; Fe-S cluster assembly protein SufD
D APAC_1865 BrkB/YihY/UPF0761 family membrane protein, possible virulence factor K07058 K07058; membrane protein
D APAC_1441 putative phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase
D APAC_0675 sufE; sulfur acceptor/SufS accessory protein K02426 sufE; cysteine desulfuration protein SufE
D APAC_2571 lemA; LemA protein K03744 lemA; LemA protein
D APAC_1492 putative vancomycin resistance protein, SanA family K03748 sanA; SanA protein
D APAC_0907 PqiA family membrane protein K03808 pqiA; paraquat-inducible protein A
D APAC_0908 pqiA; paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A
D APAC_1036 DUF420 domain-containing membrane protein K08976 K08976; putative membrane protein
D APAC_2384 DUF2238 domain-containing membrane protein K08984 yjdF; putative membrane protein
D APAC_2572 putative membrane protein K08988 K08988; putative membrane protein
D APAC_2584 DUF350 domain-containing membrane protein K08989 K08989; putative membrane protein
D APAC_2560 YchJ family protein (SEC-C domain) K09858 K09858; SEC-C motif domain protein
D APAC_2590 Cupin domain-containing protein K11312 K11312; cupin 2 domain-containing protein
D APAC_1160 PhnA domain-containing protein K06193 phnA; protein PhnA
C 99997 Function unknown
D APAC_0910 ankyrin domain-containing protein K06867 K06867; uncharacterized protein
D APAC_1345 ankyrin domain-containing protein K06867 K06867; uncharacterized protein
D APAC_2573 putative phosphatase (TPM domain) K06872 K06872; uncharacterized protein
D APAC_1081 fibronectin type III domain-containing protein K06882 K06882; uncharacterized protein
D APAC_0940 HD superfamily phosphohydrolase K06885 K06885; uncharacterized protein
D APAC_1034 ATP-binding protein K06921 K06921; uncharacterized protein
D APAC_1073 DUF234 domain-containing protein K06921 K06921; uncharacterized protein
D APAC_2502 ATP-binding protein K06921 K06921; uncharacterized protein
D APAC_0362 CoA-binding domain-containing protein K06929 K06929; uncharacterized protein
D APAC_1691 putative [Fe-S] cluster-containing protein K06940 K06940; uncharacterized protein
D APAC_1394 hypothetical protein K06950 K06950; uncharacterized protein
D APAC_1195 NAD/FAD-binding protein K06954 K06954; uncharacterized protein
D APAC_2078 putative RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D APAC_2420 peptidase M14 family metallocarboxypeptidase, succinylglutamate desuccinylase/aspartoacylase-like protein K06987 K06987; uncharacterized protein
D APAC_1660 esterase (UPF0227 domain) K07000 K07000; uncharacterized protein
D APAC_1006 RND superfamily transporter K07003 K07003; uncharacterized protein
D APAC_0509 NAD-dependent epimerase/dehydratase (DUF1731 domain) K07071 K07071; uncharacterized protein
D APAC_0697 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein
D APAC_0920 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein
D APAC_1032 nucleotidyltransferase domain-containing protein K07075 K07075; uncharacterized protein
D APAC_0350 TRAP transporter, substrate binding protein, TAXI family K07080 K07080; uncharacterized protein
D APAC_0888 TRAP transporter, substrate binding protein, TAXI family K07080 K07080; uncharacterized protein
D APAC_2432 TRAP transporter, substrate binding protein, TAXI family K07080 K07080; uncharacterized protein
D APAC_1907 sodium-dependent bicarbonate transporter K07086 K07086; uncharacterized protein
D APAC_0853 putative permease K07089 K07089; uncharacterized protein
D APAC_1467 putative permease K07089 K07089; uncharacterized protein
D APAC_2361 arsP; arsenic resistance permease K07089 K07089; uncharacterized protein
D APAC_0028 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D APAC_0883 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D APAC_1231 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D APAC_0438 DUF839 domain-containing protein K07093 K07093; uncharacterized protein
D APAC_2463 YfcE family phosphodiesterase K07095 K07095; uncharacterized protein
D APAC_0361 oligoribonuclease NrnB K07097 K07097; uncharacterized protein
D APAC_0477 metallophosphoesterase (YkuE domain) K07098 K07098; uncharacterized protein
D APAC_2600 membrane-associated metallophosphoesterase (YkuE domain) K07098 K07098; uncharacterized protein
D APAC_1114 putative sulfur transporter K07112 K07112; uncharacterized protein
D APAC_0170 putative ammonia monooxygenase K07120 K07120; uncharacterized protein
D APAC_0821 Sel1 domain-containing protein K07126 K07126; uncharacterized protein
D APAC_0857 Sel1 domain-containing protein K07126 K07126; uncharacterized protein
D APAC_0871 Sel1 domain-containing protein K07126 K07126; uncharacterized protein
D APAC_1257 Sel1 domain-containing protein K07126 K07126; uncharacterized protein
D APAC_1930 Sel1 domain-containing protein K07126 K07126; uncharacterized protein
D APAC_2485 hypothetical protein K07126 K07126; uncharacterized protein
D APAC_0444 ATP-binding protein (AAA, DUF4143 domains) K07133 K07133; uncharacterized protein
D APAC_0745 ATP-binding protein (AAA domain) K07133 K07133; uncharacterized protein
D APAC_0275 radical SAM protein, TIGR01212 family K07139 K07139; uncharacterized protein
D APAC_2083 zinc ribbon domain-containing protein (DUF164 domain) K07164 K07164; uncharacterized protein
D APAC_1913 membrane protein insertion efficiency factor, YidD family K08998 K08998; uncharacterized protein
D APAC_0597 intracellular sulfur oxidation protein, DsrE/DsrF family K09004 K09004; uncharacterized protein
D APAC_1649 GatB/YqeY family protein K09117 K09117; uncharacterized protein
D APAC_0570 AmmeMemoRadiSam system protein A K09141 K09141; uncharacterized protein
D APAC_2533 DUF493 domain-containing protein K09158 K09158; uncharacterized protein
D APAC_1194 DUF1365 domain-containing protein K09701 K09701; uncharacterized protein
D APAC_2096 DUF188 domain-containing protein K09768 K09768; uncharacterized protein
D APAC_2132 YciI domain-containing protein K09780 K09780; uncharacterized protein
D APAC_1038 putative MutK protein (DUF808 domain) K09781 K09781; uncharacterized protein
D APAC_1485 sulfite exporter TauE/SafE family protein (DsbD_2 domain) K09792 K09792; uncharacterized protein
D APAC_1726 DUF465 domain-containing protein K09794 K09794; uncharacterized protein
D APAC_2284 divergent polysaccharide deacetylase K09798 K09798; uncharacterized protein
D APAC_0139 DUF507 domain-containing protein K09804 K09804; uncharacterized protein
D APAC_0581 putative RNA-binding protein (S1 domain) K00243 K00243; uncharacterized protein
D APAC_2559 peroxide stress protein YaaA K09861 K09861; uncharacterized protein
D APAC_0095 DUF692 domain-containing protein K09930 K09930; uncharacterized protein
D APAC_2290 hypothetical protein K09944 K09944; uncharacterized protein
D APAC_1223 DUF1508 domain-containing protein (tandem domains) K09946 K09946; uncharacterized protein
D APAC_0401 DUF779 domain-containing protein K09959 K09959; uncharacterized protein
D APAC_1774 DUF2237 domain-containing protein K09966 K09966; uncharacterized protein
D APAC_1154 DUF1853 domain-containing protein K09977 K09977; uncharacterized protein
D APAC_0730 DUF2156 domain-containing protein K01163 K01163; uncharacterized protein
D APAC_1748 mitochondrial fission domain-containing protein K07276 K07276; uncharacterized protein
D APAC_0304 putative RNA-binding protein (DUF448 domain) K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 7, 2024