+D GENES KO #

  KEGG Orthology (KO) - Archaeoglobus profundus

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:apo00010] D Arcpr_1235 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D Arcpr_0973 predicted phospho-2-dehydro-3-deoxyheptonate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Arcpr_1256 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Arcpr_0817 predicted phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Arcpr_0267 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Arcpr_0732 glyceraldehyde-3-phosphate dehydrogenase, type II K00150 gap2; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) [EC:1.2.1.59] D Arcpr_0350 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Arcpr_1280 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Arcpr_1661 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Arcpr_0194 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Arcpr_1456 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Arcpr_1059 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0763 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0764 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1060 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1057 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0761 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0762 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1058 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_0704 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0286 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Arcpr_0278 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00020 Citrate cycle (TCA cycle) [PATH:apo00020] D Arcpr_1122 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Arcpr_0248 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Arcpr_1843 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Arcpr_1842 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Arcpr_1841 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Arcpr_1840 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Arcpr_0531 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Arcpr_0532 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Arcpr_0622 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Arcpr_0037 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Arcpr_0005 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Arcpr_1059 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0763 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0764 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1060 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1057 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0761 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0762 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1058 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00030 Pentose phosphate pathway [PATH:apo00030] D Arcpr_1235 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D Arcpr_0873 ribose 5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Arcpr_1052 formaldehyde-activating enzyme K13812 fae-hps; bifunctional enzyme Fae/Hps [EC:4.2.1.147 4.1.2.43] D Arcpr_0698 sugar isomerase (SIS) K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Arcpr_0694 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Arcpr_1797 Orotidine 5'-phosphate decarboxylase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27] D Arcpr_0278 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Arcpr_1242 translation initiation factor, aIF-2BII family K18237 K18237; ribose 1,5-bisphosphate isomerase [EC:5.3.1.29] D Arcpr_0755 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Arcpr_0080 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Arcpr_1332 Aldehyde ferredoxin oxidoreductase K03738 aor; aldehyde:ferredoxin oxidoreductase [EC:1.2.7.5] D Arcpr_0243 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Arcpr_0973 predicted phospho-2-dehydro-3-deoxyheptonate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Arcpr_1256 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Arcpr_0817 predicted phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] C 00040 Pentose and glucuronate interconversions [PATH:apo00040] D Arcpr_1218 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Arcpr_1215 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Arcpr_0594 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:apo00051] D Arcpr_1022 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Arcpr_0278 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Arcpr_0594 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Arcpr_0588 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] D Arcpr_0589 mannosyl-3-phosphoglycerate phosphatase family K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D Arcpr_0973 predicted phospho-2-dehydro-3-deoxyheptonate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Arcpr_1256 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Arcpr_0817 predicted phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Arcpr_0267 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism [PATH:apo00052] D Arcpr_0781 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Arcpr_1215 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Arcpr_0278 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] C 00053 Ascorbate and aldarate metabolism D Arcpr_1218 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] C 00500 Starch and sucrose metabolism [PATH:apo00500] D Arcpr_1215 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Arcpr_1593 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D Arcpr_0278 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Arcpr_1235 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:apo00520] D Arcpr_1716 ROK family protein K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D Arcpr_0278 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Arcpr_1215 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Arcpr_1218 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Arcpr_0781 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Arcpr_1235 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D Arcpr_1022 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] C 00620 Pyruvate metabolism [PATH:apo00620] D Arcpr_0704 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_1059 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0763 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0764 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1060 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1057 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0761 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0762 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1058 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_0286 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Arcpr_0180 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Arcpr_1849 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Arcpr_0037 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Arcpr_0005 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Arcpr_0622 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Arcpr_0531 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Arcpr_0532 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Arcpr_1456 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_0743 isopropylmalate/citramalate/homocitratesynthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:apo00630] D Arcpr_0704 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0622 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Arcpr_1122 2-methylcitrate synthase/citrate synthase II K01647 CS; citrate synthase [EC:2.3.3.1] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_0814 SPP-like hydrolase K22223 pgp; phosphoglycolate phosphatase [EC:3.1.3.18] D Arcpr_1634 ribulose bisphosphate carboxylase, type III K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Arcpr_0382 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Arcpr_1587 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Arcpr_0687 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Arcpr_0243 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Arcpr_0674 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Arcpr_0675 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Arcpr_0677 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma C 00640 Propanoate metabolism [PATH:apo00640] D Arcpr_0704 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0286 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Arcpr_1059 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0763 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0764 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1060 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1057 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0761 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0762 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1058 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] C 00650 Butanoate metabolism [PATH:apo00650] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1535 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Arcpr_1843 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Arcpr_1842 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Arcpr_1841 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Arcpr_1840 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Arcpr_1059 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0763 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0764 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1060 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1057 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0761 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0762 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1058 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_0144 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D Arcpr_0171 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Arcpr_0172 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:apo00660] D Arcpr_0171 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Arcpr_0172 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Arcpr_0765 isopropylmalate/citramalate/homocitratesynthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Arcpr_0649 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Arcpr_0794 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Arcpr_0991 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Arcpr_1301 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Arcpr_0379 isopropylmalate/isohomocitrate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:apo00562] D Arcpr_1540 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Arcpr_0442 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Arcpr_0766 CDP-alcohol phosphatidyltransferase K23992 K23992; 1L-myo-inositol 1-phosphate cytidylyltransferase / CDP-L-myo-inositol myo-inositolphosphotransferase [EC:2.7.7.74 2.7.8.34] D Arcpr_0267 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:apo00190] D Arcpr_1843 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Arcpr_1842 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Arcpr_1841 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Arcpr_1840 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Arcpr_0935 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Arcpr_1646 ATP synthase, A subunit K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D Arcpr_1647 ATP synthase, B subunit K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D Arcpr_1644 ATP synthase A1, C subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C D Arcpr_1648 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D Arcpr_1643 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D Arcpr_1645 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F D Arcpr_1638 ATP synthase H subunit K02107 ATPVG; V/A-type H+/Na+-transporting ATPase subunit G/H D Arcpr_1639 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D Arcpr_1640 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Arcpr_1642 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D Arcpr_1053 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes [PATH:apo00720] D Arcpr_1059 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0763 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0764 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1060 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1057 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0761 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0762 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1058 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1456 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Arcpr_0037 acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1] D Arcpr_0005 oxaloacetate decarboxylase alpha subunit K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1] D Arcpr_0622 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Arcpr_0531 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2] D Arcpr_0532 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2] D Arcpr_1843 succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Arcpr_1842 succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Arcpr_1841 hypothetical protein K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Arcpr_1840 hypothetical protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Arcpr_1040 AMP-dependent synthetase and ligase K14466 K14466; 4-hydroxybutyrate---CoA ligase (AMP-forming) [EC:6.2.1.40] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_0248 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Arcpr_0704 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] C 00680 Methane metabolism [PATH:apo00680] D Arcpr_0674 molybdopterin oxidoreductase K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Arcpr_0675 4Fe-4S ferredoxin iron-sulfur binding domain protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Arcpr_0677 hypothetical protein K00127 fdoI; formate dehydrogenase subunit gamma D Arcpr_1587 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Arcpr_0687 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Arcpr_0243 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Arcpr_0194 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Arcpr_0622 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Arcpr_0973 predicted phospho-2-dehydro-3-deoxyheptonate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D Arcpr_1256 protein of unknown function DUF100 K01622 K01622; fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] D Arcpr_0817 predicted phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Arcpr_0698 sugar isomerase (SIS) K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Arcpr_0694 6-phospho 3-hexuloisomerase K08094 hxlB; 6-phospho-3-hexuloisomerase [EC:5.3.1.27] D Arcpr_1052 formaldehyde-activating enzyme K13812 fae-hps; bifunctional enzyme Fae/Hps [EC:4.2.1.147 4.1.2.43] D Arcpr_1797 Orotidine 5'-phosphate decarboxylase K13831 hps-phi; 3-hexulose-6-phosphate synthase / 6-phospho-3-hexuloisomerase [EC:4.1.2.43 5.3.1.27] D Arcpr_0160 Formylmethanofuran--tetrahydromethanopterin N-formyltransferase K00672 ftr; formylmethanofuran--tetrahydromethanopterin N-formyltransferase [EC:2.3.1.101] D Arcpr_0990 methenyltetrahydromethanopterin cyclohydrolase K01499 mch; methenyltetrahydromethanopterin cyclohydrolase [EC:3.5.4.27] D Arcpr_1586 Methylenetetrahydromethanopterin dehydrogenase K00319 mtd; methylenetetrahydromethanopterin dehydrogenase [EC:1.5.98.1] D Arcpr_1589 coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein K00441 frhB; coenzyme F420 hydrogenase subunit beta [EC:1.12.98.1] D Arcpr_1585 5,10-methylenetetrahydromethanopterin reductase K00320 mer; 5,10-methylenetetrahydromethanopterin reductase [EC:1.5.98.2] D Arcpr_1061 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Arcpr_0774 methyl-viologen-reducing hydrogenase delta subunit K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Arcpr_1555 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 hdrA2; heterodisulfide reductase subunit A2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Arcpr_1553 CoB--CoM heterodisulfide reductase K03389 hdrB2; heterodisulfide reductase subunit B2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Arcpr_1554 Heterodisulfide reductase subunit C-like protein K03390 hdrC2; heterodisulfide reductase subunit C2 [EC:1.8.7.3 1.8.98.4 1.8.98.5 1.8.98.6] D Arcpr_1552 methyl-viologen-reducing hydrogenase delta subunit K14127 mvhD; F420-non-reducing hydrogenase iron-sulfur subunit [EC:1.12.99.- 1.8.98.5 1.8.98.6] D Arcpr_1550 nickel-dependent hydrogenase large subunit K14126 mvhA; F420-non-reducing hydrogenase large subunit [EC:1.12.99.- 1.8.98.5] D Arcpr_1551 NADH ubiquinone oxidoreductase 20 kDa subunit K14128 mvhG; F420-non-reducing hydrogenase small subunit [EC:1.12.99.- 1.8.98.5] D Arcpr_0704 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_1059 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0763 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0764 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1060 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1057 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0761 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0762 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1058 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1456 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Arcpr_1280 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Arcpr_1661 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Arcpr_0691 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Arcpr_1465 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Arcpr_1291 Radical SAM domain protein K11781 cofH; 5-amino-6-(D-ribitylamino)uracil---L-tyrosine 4-hydroxyphenyl transferase [EC:2.5.1.147] D Arcpr_1290 Radical SAM domain protein K11780 cofG; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase [EC:4.3.1.32] D Arcpr_0054 protein of unknown function DUF121 K14941 cofC; 2-phospho-L-lactate/phosphoenolpyruvate guanylyltransferase [EC:2.7.7.68 2.7.7.105] D Arcpr_1471 LPPG domain protein containing protein K11212 cofD; LPPG:FO 2-phospho-L-lactate transferase [EC:2.7.8.28] D Arcpr_0406 F420-dependent oxidoreductase K12234 cofE; coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] D Arcpr_0572 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00910 Nitrogen metabolism D Arcpr_0382 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] C 00920 Sulfur metabolism [PATH:apo00920] D Arcpr_1264 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Arcpr_1261 adenylylsulfate reductase, alpha subunit K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2] D Arcpr_1262 adenylylsulfate reductase, beta subunit K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2] D Arcpr_0139 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Arcpr_0140 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] D Arcpr_1729 Nitrate reductase gamma subunit K27187 dsrM; [DsrC]-trisulfide reductase subunit M [EC:1.8.5.10] D Arcpr_1730 4Fe-4S ferredoxin, iron-sulfur binding protein K27188 dsrK; [DsrC]-trisulfide reductase subunit K [EC:1.8.5.10] D Arcpr_1731 cytochrome c family protein K27189 dsrJ; [DsrC]-trisulfide reductase subunit J D Arcpr_1727 4Fe-4S ferredoxin iron-sulfur binding domain protein K27190 dsrO; [DsrC]-trisulfide reductase subunit O D Arcpr_1728 Polysulphide reductase NrfD K27191 dsrP; [DsrC]-trisulfide reductase subunit P B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:apo00071] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism D Arcpr_0243 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] C 00564 Glycerophospholipid metabolism [PATH:apo00564] D Arcpr_0868 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Arcpr_0988 geranylgeranylglyceryl phosphate synthase K17104 E2.5.1.41; phosphoglycerol geranylgeranyltransferase [EC:2.5.1.41] D Arcpr_0776 Geranylgeranylglycerol-phosphategeranylgeranyl transferase K17105 E2.5.1.42; geranylgeranylglycerol-phosphate geranylgeranyltransferase [EC:2.5.1.42] D Arcpr_0281 protein of unknown function DUF46 K19664 carS; CDP-2,3-bis-(O-geranylgeranyl)-sn-glycerol synthase [EC:2.7.7.67] D Arcpr_0869 CDP-diacylglycerol/serine O-phosphatidyltransferase K19665 pssA; archaetidylserine synthase [EC:2.7.8.38] D Arcpr_0713 geranylgeranyl reductase K17830 GGR; digeranylgeranylglycerophospholipid reductase [EC:1.3.1.101 1.3.7.11] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:apo00230] D Arcpr_0278 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Arcpr_0755 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Arcpr_0992 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Arcpr_1104 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Arcpr_0070 phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3] D Arcpr_0069 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3] D Arcpr_0820 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Arcpr_0386 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Arcpr_0663 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Arcpr_0662 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Arcpr_1292 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Arcpr_1231 IMP biosynthesis enzyme PurP domain protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D Arcpr_1226 IMP biosynthesis enzyme PurP domain protein K06863 purP; 5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase [EC:6.3.4.23] D Arcpr_0872 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Arcpr_0498 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Arcpr_0769 protein of unknown function DUF84 K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D Arcpr_0053 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Arcpr_0933 GMP synthase, small subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Arcpr_1019 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Arcpr_0010 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Arcpr_1851 adenylyl cyclase CyaB K05873 cyaB; adenylate cyclase, class 2 [EC:4.6.1.1] D Arcpr_0484 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Arcpr_1123 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D Arcpr_1618 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D Arcpr_1334 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Arcpr_0279 Adenylate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D Arcpr_0216 protein of unknown function DUF265 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D Arcpr_1264 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Arcpr_1407 Asp/Glu/hydantoin racemase K16841 hpxA; allantoin racemase [EC:5.1.99.3] C 00240 Pyrimidine metabolism [PATH:apo00240] D Arcpr_0660 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Arcpr_0661 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Arcpr_1118 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Arcpr_1117 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Arcpr_1632 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3] D Arcpr_0420 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14] D Arcpr_0773 oxidoreductase FAD/NAD(P)-binding domain protein K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit D Arcpr_0134 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Arcpr_0745 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Arcpr_0960 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Arcpr_0498 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Arcpr_0772 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Arcpr_1336 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D Arcpr_0872 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Arcpr_1123 AMP phosphorylase K18931 deoA; AMP phosphorylase [EC:2.4.2.57] D Arcpr_0010 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D Arcpr_0346 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Arcpr_1850 protein of unknown function UPF0066 K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Arcpr_0253 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:apo00250] D Arcpr_1434 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0528 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0075 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Arcpr_1568 alanine dehydrogenase K19244 ala; alanine dehydrogenase [EC:1.4.1.1] D Arcpr_1571 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Arcpr_0227 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Arcpr_0484 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Arcpr_1292 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Arcpr_1118 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Arcpr_1117 aspartate carbamoyltransferase, regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D Arcpr_0382 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Arcpr_0660 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Arcpr_0661 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Arcpr_0820 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Arcpr_0992 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:apo00260] D Arcpr_0708 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Arcpr_1818 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Arcpr_0276 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Arcpr_1592 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Arcpr_1587 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Arcpr_0687 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Arcpr_0243 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Arcpr_1280 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Arcpr_1661 phosphonopyruvate decarboxylase-related protein K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Arcpr_0691 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Arcpr_1465 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Arcpr_0170 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Arcpr_0205 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Arcpr_0206 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Arcpr_1561 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:apo00270] D Arcpr_0042 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Arcpr_0043 Cobalamin-independent synthase MetE domain protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Arcpr_1041 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Arcpr_1302 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Arcpr_0174 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Arcpr_1007 methylthioadenosine phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] D Arcpr_0147 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Arcpr_0136 translation initiation factor, aIF-2BI family K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Arcpr_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Arcpr_1447 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Arcpr_0708 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Arcpr_1818 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Arcpr_0276 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Arcpr_1399 protein of unknown function DUF39 K23975 E2.8.1.16; L-aspartate semialdehyde sulfurtransferase [EC:2.8.1.16] D Arcpr_1400 4Fe-4S ferredoxin iron-sulfur binding domain protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D Arcpr_0712 4Fe-4S ferredoxin iron-sulfur binding domain protein K23976 K23976; L-aspartate semialdehyde sulfurtransferase ferredoxin D Arcpr_0274 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Arcpr_1434 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0528 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0170 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Arcpr_0622 Lactate/malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Arcpr_0691 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] C 00280 Valine, leucine and isoleucine degradation [PATH:apo00280] D Arcpr_0274 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_0144 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:apo00290] D Arcpr_0765 isopropylmalate/citramalate/homocitratesynthase K09011 cimA; (R)-citramalate synthase [EC:2.3.3.21] D Arcpr_0649 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Arcpr_0794 homoaconitate hydratase family protein K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Arcpr_0991 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Arcpr_1301 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Arcpr_0379 isopropylmalate/isohomocitrate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Arcpr_0171 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Arcpr_0172 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Arcpr_0347 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Arcpr_1461 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Arcpr_0274 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Arcpr_0743 isopropylmalate/citramalate/homocitratesynthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:apo00300] D Arcpr_0276 Homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Arcpr_0708 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Arcpr_1818 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Arcpr_1093 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Arcpr_0191 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Arcpr_1270 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Arcpr_1558 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Arcpr_0265 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Arcpr_1121 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Arcpr_0931 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00310 Lysine degradation [PATH:apo00310] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_0170 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] C 00220 Arginine biosynthesis [PATH:apo00220] D Arcpr_0390 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Arcpr_1571 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Arcpr_0227 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Arcpr_0820 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Arcpr_0382 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Arcpr_1434 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0528 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_1597 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Arcpr_1266 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Arcpr_0269 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Arcpr_1270 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Arcpr_1048 peptidase M20 K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:apo00330] D Arcpr_0349 arginine decarboxylase, pyruvoyl-dependent K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D Arcpr_1101 agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D Arcpr_0174 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Arcpr_1302 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D Arcpr_0322 Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Arcpr_1434 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0528 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:apo00340] D Arcpr_1042 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Arcpr_1297 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D Arcpr_0411 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Arcpr_0824 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Arcpr_0020 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Arcpr_0410 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Arcpr_0651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Arcpr_1244 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Arcpr_0997 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:apo00350] D Arcpr_1434 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0528 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Arcpr_1244 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Arcpr_0572 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00360 Phenylalanine metabolism [PATH:apo00360] D Arcpr_1624 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Arcpr_1037 AMP-dependent synthetase and ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Arcpr_1570 thioesterase superfamily protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Arcpr_1434 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0528 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Arcpr_1244 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00380 Tryptophan metabolism D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:apo00400] D Arcpr_0817 predicted phospho-2-dehydro-3-deoxyheptonate aldolase K16306 K16306; fructose-bisphosphate aldolase / 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase [EC:4.1.2.13 2.2.1.10] D Arcpr_0974 3-dehydroquinate synthase K11646 K11646; 3-dehydroquinate synthase II [EC:1.4.1.24] D Arcpr_1658 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D Arcpr_0877 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Arcpr_0033 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Arcpr_0925 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Arcpr_0467 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Arcpr_0211 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Arcpr_0210 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Arcpr_0212 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Arcpr_0209 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Arcpr_0213 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Arcpr_0205 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Arcpr_0206 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Arcpr_1561 pyridoxal-phosphate dependent TrpB-like enzyme K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Arcpr_1546 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Arcpr_1434 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0528 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Arcpr_1244 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:apo00410] D Arcpr_0572 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] D Arcpr_0288 Protein of unknown function DUF137 K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] C 00430 Taurine and hypotaurine metabolism D Arcpr_1568 alanine dehydrogenase K19244 ala; alanine dehydrogenase [EC:1.4.1.1] C 00440 Phosphonate and phosphinate metabolism D Arcpr_0242 beta-lactamase domain protein K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:apo00450] D Arcpr_0042 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Arcpr_0043 Cobalamin-independent synthase MetE domain protein K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D Arcpr_0353 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Arcpr_1264 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Arcpr_0221 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D Arcpr_1587 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Arcpr_0687 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:apo00470] D Arcpr_0170 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D Arcpr_0820 phosphoribosylformylglycinamidine synthase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2] D Arcpr_1406 Mandelate racemase/muconate lactonizing protein K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D Arcpr_0265 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Arcpr_0931 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] C 00480 Glutathione metabolism [PATH:apo00480] D Arcpr_0248 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Arcpr_0174 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis C 00550 Peptidoglycan biosynthesis C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:apo00543] D Arcpr_1717 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:apo00730] D Arcpr_1741 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Arcpr_1599 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Arcpr_0189 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Arcpr_1423 thiazole biosynthesis enzyme K22699 thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59] D Arcpr_0803 thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Arcpr_0577 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Arcpr_0216 protein of unknown function DUF265 K06928 NTPCR; nucleoside-triphosphatase [EC:3.6.1.15] D Arcpr_1334 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:apo00740] D Arcpr_1140 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Arcpr_1054 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino) pyrimidine1-reductase K14654 RIB7; 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase [EC:1.1.1.302] D Arcpr_1274 3,4-dihydroxy-2-butanone 4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D Arcpr_0527 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Arcpr_0475 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Arcpr_1275 transcriptional regulator, MarR family K07732 rfk; riboflavin kinase, archaea type [EC:2.7.1.161] D Arcpr_1573 cytidyltransferase-related domain protein K14656 ribL; FAD synthetase [EC:2.7.7.2] D Arcpr_1416 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:apo00750] D Arcpr_1592 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Arcpr_0680 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6] D Arcpr_0681 SNO glutamine amidotransferase K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6] C 00760 Nicotinate and nicotinamide metabolism [PATH:apo00760] D Arcpr_0018 Quinolinate phosphoribosyl transferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D Arcpr_0872 stationary-phase survival protein SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Arcpr_1425 nicotinamide-nucleotide adenylyltransferase K00952 nadM; nicotinamide-nucleotide adenylyltransferase [EC:2.7.7.1] D Arcpr_1468 NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Arcpr_0796 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Arcpr_1539 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] C 00770 Pantothenate and CoA biosynthesis [PATH:apo00770] D Arcpr_0171 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Arcpr_0172 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Arcpr_0347 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Arcpr_1461 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Arcpr_0108 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Arcpr_0431 GHMP kinase K06982 pok; pantoate kinase [EC:2.7.1.169] D Arcpr_0288 Protein of unknown function DUF137 K09722 K09722; 4-phosphopantoate---beta-alanine ligase [EC:6.3.2.36] D Arcpr_0427 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Arcpr_1738 cytidyltransferase-related domain protein K02201 E2.7.7.3B; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Arcpr_0603 Protein of unknown function DUF359 K09735 dpck; GTP-dependent dephospho-CoA kinase [EC:2.7.1.237] D Arcpr_0274 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Arcpr_0572 Pyridoxal-dependent decarboxylase K18933 mfnA; tyrosine decarboxylase / aspartate 1-decarboxylase [EC:4.1.1.25 4.1.1.11] C 00780 Biotin metabolism [PATH:apo00780] D Arcpr_1817 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism C 00790 Folate biosynthesis [PATH:apo00790] D Arcpr_1140 GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Arcpr_0465 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Arcpr_1622 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Arcpr_1427 protein of unknown function DUF198 K17488 mptA; GTP cyclohydrolase IV [EC:3.5.4.39] D Arcpr_0870 Protein of unknown function DUF381 K09739 mptD; dihydroneopterin aldolase [EC:4.1.2.25] D Arcpr_0559 protein of unknown function DUF115 K07142 mptE; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Arcpr_1537 beta-ribofuranosylaminobenzene 5'-phosphate synthase family K06984 K06984; beta-ribofuranosylaminobenzene 5'-phosphate synthase [EC:2.4.2.54] D Arcpr_0241 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Arcpr_0962 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D Arcpr_0544 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Arcpr_0294 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Arcpr_1225 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Arcpr_1474 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Arcpr_0296 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Arcpr_0647 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Arcpr_0543 MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:apo00670] D Arcpr_1587 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Arcpr_0687 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Arcpr_0253 thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148] D Arcpr_1084 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:apo00860] D Arcpr_0561 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Arcpr_1432 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Arcpr_0591 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Arcpr_1433 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Arcpr_0592 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Arcpr_0323 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Arcpr_0593 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Arcpr_0138 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Arcpr_0015 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76] D Arcpr_0326 Radical SAM domain protein K22226 ahbC; Fe-coproporphyrin III synthase D Arcpr_0723 Radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6] D Arcpr_0935 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Arcpr_1725 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Arcpr_1069 Cobaltochelatase K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2] D Arcpr_0302 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Arcpr_0307 protein of unknown function DUF105 K08260 cbiZ; adenosylcobinamide hydrolase [EC:3.5.1.90] D Arcpr_0305 GTP:adenosylcobinamide-phosphateguanylyl transferase-like protein K19712 cobY; adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.7.62] D Arcpr_0303 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Arcpr_1070 magnesium chelatase ChlI subunit K03404 chlD; magnesium chelatase subunit D [EC:6.6.1.1] D Arcpr_0291 ATPase associated with various cellular activities AAA_5 K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:apo00130] D Arcpr_1251 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Arcpr_1595 UbiD family decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Arcpr_1416 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Arcpr_0579 protein of unknown function DUF178 K11782 mqnA; chorismate dehydratase [EC:4.2.1.151] D Arcpr_0184 Radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D Arcpr_1413 Radical SAM domain protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] D Arcpr_1236 protein of unknown function DUF191 K11785 mqnD; 1,4-dihydroxy-6-naphthoate synthase [EC:1.14.-.-] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:apo00900] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_0144 hydroxymethylglutaryl-CoA synthase K01641 HMGCS; hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10] D Arcpr_1276 hydroxymethylglutaryl-CoA reductase, degradative K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88] D Arcpr_0999 mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36] D Arcpr_1564 aspartate/glutamate/uridylate kinase K06981 ipk; isopentenyl phosphate kinase [EC:2.7.4.26] D Arcpr_1395 protein of unknown function DUF521 K25517 acnX1; phosphomecalonate degydratase large subunit [EC:4.2.1.182] D Arcpr_0690 protein of unknown function DUF126 K09128 acnX2; phosphomecalonate degydratase small subunit [EC:4.2.1.182] D Arcpr_1653 UbiD family decarboxylase K25518 E4.1.1.126; anhydromevalonate phosphate decarboxylase [EC:4.1.1.126] D Arcpr_1416 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Arcpr_1563 isopentenyl-diphosphate delta-isomerase, type 2 K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D Arcpr_1562 Dimethylallyltranstransferase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Arcpr_1457 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Arcpr_0260 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Arcpr_0491 undecaprenyl diphosphate synthase K15888 uppS; tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:apo00523] D Arcpr_0695 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Arcpr_1197 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Arcpr_1198 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Arcpr_1202 dTDP-4-dehydrorhamnose 3 5-epimerase-like protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Arcpr_1201 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics D Arcpr_1198 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:apo00261] D Arcpr_1264 sulfate adenylyltransferase K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4] D Arcpr_0708 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Arcpr_1818 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Arcpr_1093 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Arcpr_0191 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:apo00521] D Arcpr_0278 Phosphoglucosamine mutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Arcpr_0442 Myo-inositol-1-phosphate synthase K01858 INO1; myo-inositol-1-phosphate synthase [EC:5.5.1.4] D Arcpr_1540 Inositol-phosphate phosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Arcpr_0695 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Arcpr_1197 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Arcpr_1198 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Arcpr_1202 dTDP-4-dehydrorhamnose 3 5-epimerase-like protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Arcpr_1201 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis [PATH:apo00525] D Arcpr_0695 Nucleotidyl transferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Arcpr_1197 glucose-1-phosphate thymidyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Arcpr_1198 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:apo00401] D Arcpr_1434 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0528 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Arcpr_1244 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Arcpr_0211 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Arcpr_0210 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics C 00999 Biosynthesis of various plant secondary metabolites [PATH:apo00999] D Arcpr_1041 Methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Arcpr_0877 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:apo00362] D Arcpr_1535 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation D Arcpr_1416 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation [PATH:apo00633] D Arcpr_1005 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Arcpr_1006 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Arcpr_1059 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0763 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1] D Arcpr_0764 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1060 thiamine pyrophosphate protein domain protein TPP-binding protein K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1] D Arcpr_1057 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0761 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1] D Arcpr_0762 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_1058 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1] D Arcpr_0139 sulfite reductase, dissimilatory-type alpha subunit K11180 dsrA; dissimilatory sulfite reductase alpha subunit [EC:1.8.1.22] D Arcpr_0140 sulfite reductase, dissimilatory-type beta subunit K11181 dsrB; dissimilatory sulfite reductase beta subunit [EC:1.8.1.22] C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:apo03020] D Arcpr_0977 RNA polymerase Rpb2 domain 6 K03044 rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] D Arcpr_0976 RNA polymerase beta subunit K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6] D Arcpr_0978 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D Arcpr_0979 DNA-directed RNA polymerase, subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D Arcpr_1028 RNA polymerase insert K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D Arcpr_0725 RNA polymerase dimerization K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D Arcpr_0601 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D Arcpr_1233 RNA polymerase Rpb4 K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D Arcpr_0975 RNA polymerase Rpb5 K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D Arcpr_0129 RNA polymerase Rpb6 K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D Arcpr_0130 RNA polymerase, N/8 Kd subunit K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D Arcpr_0526 RNA polymerase Rbp10 K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] C 03022 Basal transcription factors [PATH:apo03022] D Arcpr_0045 Transcription factor TFIIB cyclin-related protein K03124 TFIIB; transcription initiation factor TFIIB D Arcpr_0058 TATA-box binding family protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Arcpr_1820 Transcription factor TFIIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:apo03010] D Arcpr_0938 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Arcpr_1355 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Arcpr_1026 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Arcpr_1341 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Arcpr_0983 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Arcpr_1346 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Arcpr_0131 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Arcpr_1326 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Arcpr_1027 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Arcpr_0982 ribosomal protein S23 (S12) K02950 RP-S12; small subunit ribosomal protein S12 D Arcpr_1025 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Arcpr_1347 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Arcpr_1076 Ribosomal S13S15 domain protein K02956 RP-S15; small subunit ribosomal protein S15 D Arcpr_1352 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Arcpr_1357 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Arcpr_0797 ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D Arcpr_1349 Ribosomal protein S4E, central domain protein K02987 RP-S4e; small subunit ribosomal protein S4e D Arcpr_0876 Ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D Arcpr_0282 ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D Arcpr_1092 conserved hypothetical protein K02962 RP-S17e; small subunit ribosomal protein S17e D Arcpr_0239 Ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D Arcpr_0604 Ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D Arcpr_0730 hypothetical protein K02976 RP-S26e; small subunit ribosomal protein S26e D Arcpr_1739 Ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e D Arcpr_0605 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Arcpr_0495 Ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D Arcpr_1734 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Arcpr_1358 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Arcpr_1361 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Arcpr_1345 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Arcpr_1735 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Arcpr_0881 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Arcpr_1736 ribosomal protein 60S K02869 RP-L12; large subunit ribosomal protein L12 D Arcpr_0132 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Arcpr_1351 ribosomal protein L14b/L23e K02874 RP-L14; large subunit ribosomal protein L14 D Arcpr_1339 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Arcpr_1342 ribosomal protein L18P/L5E K02881 RP-L18; large subunit ribosomal protein L18 D Arcpr_1356 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Arcpr_1359 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Arcpr_1350 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Arcpr_1354 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Arcpr_1340 ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Arcpr_1360 ribosomal protein L4/L1e K02930 RP-L4e; large subunit ribosomal protein L4e D Arcpr_0494 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Arcpr_1467 ribosomal protein L10.e K02866 RP-L10e; large subunit ribosomal protein L10e D Arcpr_0065 Ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D Arcpr_0133 ribosomal protein L15 K02883 RP-L18e; large subunit ribosomal protein L18e D Arcpr_1343 Ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D Arcpr_1234 Ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D Arcpr_0496 Ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e D Arcpr_0980 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02908 RP-L30e; large subunit ribosomal protein L30e D Arcpr_0236 Ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D Arcpr_1344 Ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D Arcpr_0993 Ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D Arcpr_0525 ribosomal protein L37a K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D Arcpr_0237 Ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D Arcpr_0963 Ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Arcpr_1740 Ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e D Arcpr_0234 Ribosomal LX protein K02944 RP-LX; large subunit ribosomal protein LX D Arcpr_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Arcpr_R0039 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Arcpr_R0053 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:apo00970] D Arcpr_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Arcpr_R0052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Arcpr_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Arcpr_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0047 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Arcpr_R0049 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Arcpr_R0015 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Arcpr_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Arcpr_R0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Arcpr_R0011 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Arcpr_R0050 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Arcpr_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Arcpr_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Arcpr_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Arcpr_R0037 tRNA-His K14226 tRNA-His; tRNA His D Arcpr_R0027 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Arcpr_R0038 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Arcpr_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Arcpr_R0003 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Arcpr_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Arcpr_R0002 tRNA-Met K14230 tRNA-Met; tRNA Met D Arcpr_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met D Arcpr_R0028 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Arcpr_R0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Arcpr_R0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Arcpr_R0004 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Arcpr_R0013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Arcpr_R0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Arcpr_R0008 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Arcpr_R0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Arcpr_R0031 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Arcpr_R0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Arcpr_R0042 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Arcpr_R0019 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Arcpr_R0009 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Arcpr_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val D Arcpr_R0014 tRNA-Val K14237 tRNA-Val; tRNA Val D Arcpr_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Arcpr_0561 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Arcpr_1310 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Arcpr_0503 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Arcpr_1309 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Arcpr_0228 glutamyl-tRNA(Gln) amidotransferase, subunit D K09482 gatD; glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] D Arcpr_1077 aspartyl-tRNA(Asn) amidotransferase, B subunit K03330 gatE; glutamyl-tRNA(Gln) amidotransferase subunit E [EC:6.3.5.7] D Arcpr_0078 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Arcpr_0998 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Arcpr_0214 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Arcpr_0164 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Arcpr_0795 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Arcpr_1311 O-phosphoseryl-tRNA(Cys) synthetase K07587 sepRS; O-phosphoseryl-tRNA synthetase [EC:6.1.1.27] D Arcpr_0056 Sep-tRNA K06868 sepcysS; Sep-tRNA:Cys-tRNA synthetase [EC:2.5.1.73] D Arcpr_0443 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Arcpr_0221 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Arcpr_0003 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Arcpr_1287 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Arcpr_0361 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Arcpr_1590 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Arcpr_0103 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Arcpr_0757 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Arcpr_1598 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Arcpr_0815 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Arcpr_1560 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Arcpr_0064 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Arcpr_0578 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:apo03060] D Arcpr_1338 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Arcpr_1035 GTP-binding signal recognition particle SRP54 G-domain protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Arcpr_R0032 signal recognition particle RNA predicted by Rfam(RF 00017), score 94.18 K01983 ffs; SRP RNA D Arcpr_R0033 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Arcpr_0232 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Arcpr_0879 protein translocase SEC61 complex, gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D Arcpr_1298 Ribonucleoprotein complex SRP, Srp19 component K03105 SRP19; signal recognition particle subunit SRP19 D Arcpr_0325 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Arcpr_1099 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Arcpr_1098 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB D Arcpr_0149 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Arcpr_1021 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC D Arcpr_0408 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Arcpr_0787 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:apo04122] D Arcpr_1225 molybdopterin biosynthesis MoaE protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Arcpr_0544 molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Arcpr_0284 MoaD family protein K03636 moaD; sulfur-carrier protein D Arcpr_0294 molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Arcpr_1474 molybdenum cofactor synthesis domain protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D Arcpr_0189 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Arcpr_0028 thiamineS protein K03154 thiS; sulfur carrier protein C 03050 Proteasome [PATH:apo03050] D Arcpr_1629 26S proteasome subunit P45 family K03420 psmR; proteasome regulatory subunit D Arcpr_0509 Proteasome endopeptidase complex K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Arcpr_0441 Proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] C 03018 RNA degradation [PATH:apo03018] D Arcpr_0511 KH type 1 domain protein K03679 RRP4; exosome complex component RRP4 D Arcpr_0513 3' exoribonuclease K12589 RRP42; exosome complex component RRP42 D Arcpr_0512 exosome complex exonuclease 1 K11600 RRP41; exosome complex component RRP41 D Arcpr_0194 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] B B 09124 Replication and repair C 03030 DNA replication [PATH:apo03030] D Arcpr_1825 TOPRIM domain protein K02316 dnaG; DNA primase [EC:2.7.7.101] D Arcpr_0017 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Arcpr_0273 DNA polymerase Pol2 K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Arcpr_0397 DNA-directed DNA polymerase K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D Arcpr_1565 DNA polymerase II, large subunit DP2 K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D Arcpr_0792 MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Arcpr_0832 MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Arcpr_1699 MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Arcpr_1801 DNA primase, small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D Arcpr_1254 DNA primase, large subunit K18882 priL; DNA primase large subunit D Arcpr_0121 hypothetical protein K18882 priL; DNA primase large subunit D Arcpr_1253 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Arcpr_0505 Replication factor C K04801 rfcS; replication factor C small subunit D Arcpr_0770 AAA ATPase central domain protein K04800 rfcL; replication factor C large subunit D Arcpr_1473 XPG I domain protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Arcpr_0546 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03410 Base excision repair [PATH:apo03410] D Arcpr_0339 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Arcpr_1253 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Arcpr_1473 XPG I domain protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Arcpr_0546 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Arcpr_1714 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Arcpr_0923 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Arcpr_1137 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Arcpr_1312 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03420 Nucleotide excision repair [PATH:apo03420] D Arcpr_0122 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Arcpr_1253 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Arcpr_0546 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03430 Mismatch repair [PATH:apo03430] D Arcpr_1050 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Arcpr_0122 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Arcpr_1137 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Arcpr_1312 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Arcpr_1253 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Arcpr_0546 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] C 03440 Homologous recombination D Arcpr_1137 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Arcpr_1312 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] C 03450 Non-homologous end-joining D Arcpr_1473 XPG I domain protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 D Arcpr_0602 DNA-directed RNA polymerase subunit E, RpoE2 K15171 SUPT4H1; transcription elongation factor SPT4 D Arcpr_0880 NusG antitermination factor K15172 SUPT5H; transcription elongation factor SPT5 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:apo02010] D Arcpr_1814 extracellular solute-binding protein family 1 K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D Arcpr_1813 binding-protein-dependent transport systems inner membrane component K15496 wtpB; molybdate/tungstate transport system permease protein D Arcpr_1812 ABC transporter related protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D Arcpr_0097 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Arcpr_0098 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Arcpr_0099 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Arcpr_0100 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Arcpr_0202 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Arcpr_1322 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Arcpr_1844 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Arcpr_0203 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Arcpr_1321 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Arcpr_1845 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Arcpr_0204 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Arcpr_1320 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Arcpr_1846 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Arcpr_0201 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Arcpr_1323 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Arcpr_1847 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Arcpr_0200 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Arcpr_1324 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Arcpr_1848 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Arcpr_0418 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Arcpr_0416 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Arcpr_0415 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Arcpr_0419 ABC-type Co2+ transport system periplasmic component-like protein K10094 cbiK; nickel transport protein D Arcpr_0417 hypothetical protein K16915 cbiL; nickel transport protein D Arcpr_0585 BioY protein K03523 bioY; biotin transport system substrate-specific component D Arcpr_0583 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D Arcpr_0584 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Arcpr_1205 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D Arcpr_1206 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Arcpr_0638 cytochrome c assembly protein K02195 ccmC; heme exporter protein C C 02060 Phosphotransferase system (PTS) C 03070 Bacterial secretion system [PATH:apo03070] D Arcpr_1338 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Arcpr_0232 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Arcpr_1035 GTP-binding signal recognition particle SRP54 G-domain protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Arcpr_1099 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Arcpr_1098 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB D Arcpr_0149 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Arcpr_1021 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC B B 09132 Signal transduction C 02020 Two-component system [PATH:apo02020] D Arcpr_0097 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Arcpr_0368 triphosphoribosyl-dephospho-CoA protein K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D Arcpr_1849 Malate dehydrogenase (oxaloacetate-decarboxylating) K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D Arcpr_0382 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1006 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Arcpr_1005 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Arcpr_1371 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Arcpr_1090 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Arcpr_1367 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Arcpr_1379 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Arcpr_1378 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Arcpr_1374 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Arcpr_0537 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_0996 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_1376 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_1375 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:apo02024] D Arcpr_0211 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Arcpr_0210 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Arcpr_0202 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Arcpr_1322 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Arcpr_1844 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Arcpr_0203 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Arcpr_1321 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Arcpr_1845 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Arcpr_0204 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Arcpr_1320 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Arcpr_1846 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Arcpr_0201 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Arcpr_1323 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Arcpr_1847 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Arcpr_0200 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Arcpr_1324 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Arcpr_1848 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Arcpr_0089 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Arcpr_0088 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Arcpr_0087 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Arcpr_0086 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Arcpr_1338 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Arcpr_0232 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Arcpr_1035 GTP-binding signal recognition particle SRP54 G-domain protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:apo02030] D Arcpr_1090 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Arcpr_1367 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Arcpr_1379 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Arcpr_1374 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Arcpr_1378 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Arcpr_0537 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_0996 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_1376 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_1373 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Arcpr_1375 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Arcpr_1372 CheD, stimulates methylation of MCP protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Arcpr_1371 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] C 02040 Flagellar assembly C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D Arcpr_0194 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance C 01502 Vancomycin resistance C 01503 Cationic antimicrobial peptide (CAMP) resistance B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:apo01000] C 01001 Protein kinases [BR:apo01001] D Arcpr_0799 Mn2+dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D Arcpr_0760 Non-specific serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Arcpr_0727 protein of unknown function RIO1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D Arcpr_1374 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:apo01009] D Arcpr_0340 translation initiation factor aIF-2, beta subunit K03238 EIF2S2; translation initiation factor 2 subunit 2 D Arcpr_1447 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Arcpr_1465 phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:apo01002] D Arcpr_0277 Peptidase A24B, FlaK domain protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D Arcpr_1548 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Arcpr_1002 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Arcpr_0933 GMP synthase, small subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Arcpr_1019 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Arcpr_0992 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Arcpr_0075 asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Arcpr_1512 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D Arcpr_0867 membrane protein-like protein K24447 artA; archaeosortase A [EC:3.4.22.-] D Arcpr_1558 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Arcpr_1472 methionine aminopeptidase, type II K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Arcpr_0179 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Arcpr_0739 peptidase M48 Ste24p K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Arcpr_1020 peptidase zinc-dependent K06974 amzA; archaemetzincin [EC:3.4.-.-] D Arcpr_0849 peptidase S8 and S53 subtilisin kexin sedolisin K17734 aprX; serine protease AprX [EC:3.4.21.-] D Arcpr_0655 peptidase S16, Lon-like protease K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53] D Arcpr_0408 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Arcpr_0787 peptidase S26B, signal peptidase K13280 SEC11; signal peptidase I [EC:3.4.21.89] D Arcpr_1534 Rhomboid family protein K07059 K07059; rhomboid family protein D Arcpr_0509 Proteasome endopeptidase complex K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Arcpr_0441 Proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Arcpr_0790 peptidase U62 modulator of DNA gyrase K03592 pmbA; PmbA protein D Arcpr_1024 peptidase U62 modulator of DNA gyrase K03568 tldD; TldD protein C 01003 Glycosyltransferases [BR:apo01003] D Arcpr_0185 glycosyl transferase family 2 K23684 aglJ; dolichol-phosphate hexosyltransferase [EC:2.4.1.-] D Arcpr_0321 glycosyl transferase family 2 K23683 aglD; glycosyltransferase AglD [EC:2.4.1.-] D Arcpr_1194 Oligosaccharyl transferase STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D Arcpr_0726 Oligosaccharyl transferase STT3 subunit K21306 aglB; dolichyl-phosphooligosaccharide-protein glycotransferase [EC:2.4.99.21] D Arcpr_1717 glycosyl transferase family 2 K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-] D Arcpr_1593 alpha,alpha-trehalose-phosphate synthase (UDP-forming) K16055 TPS; trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12] D Arcpr_0588 mannosyl-3-phosphoglycerate synthase K05947 E2.4.1.217; mannosyl-3-phosphoglycerate synthase [EC:2.4.1.217] C 01005 Lipopolysaccharide biosynthesis proteins [BR:apo01005] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:apo01011] D Arcpr_1512 hypothetical protein K07284 srtA; sortase A [EC:3.4.22.70] D Arcpr_0867 membrane protein-like protein K24447 artA; archaeosortase A [EC:3.4.22.-] C 01004 Lipid biosynthesis proteins [BR:apo01004] D Arcpr_0704 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0252 acetate/CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Arcpr_0286 acetyl coenzyme A synthetase (ADP forming), alpha domain protein K24012 acdAB; acetate---CoA ligase (ADP-forming) [EC:6.2.1.13] D Arcpr_1039 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] C 01008 Polyketide biosynthesis proteins [BR:apo01008] C 01006 Prenyltransferases [BR:apo01006] D Arcpr_1562 Dimethylallyltranstransferase K13787 idsA; geranylgeranyl diphosphate synthase, type I [EC:2.5.1.1 2.5.1.10 2.5.1.29] D Arcpr_1457 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Arcpr_0260 Di-trans-poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Arcpr_1251 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Arcpr_0935 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:apo01007] D Arcpr_1590 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Arcpr_0561 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Arcpr_0064 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Arcpr_0578 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Arcpr_0443 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Arcpr_0103 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Arcpr_0221 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Arcpr_0361 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Arcpr_0003 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Arcpr_1287 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Arcpr_0998 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Arcpr_1598 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Arcpr_0214 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Arcpr_0795 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Arcpr_0757 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Arcpr_0164 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Arcpr_0078 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Arcpr_1311 O-phosphoseryl-tRNA(Cys) synthetase K07587 sepRS; O-phosphoseryl-tRNA synthetase [EC:6.1.1.27] D Arcpr_0815 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Arcpr_1560 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Arcpr_1434 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_0528 aminotransferase class I and II K00812 aspB; aspartate aminotransferase [EC:2.6.1.1] D Arcpr_1121 aminotransferase class I and II K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D Arcpr_0501 aminotransferase class I and II K10907 K10907; aminotransferase [EC:2.6.1.-] D Arcpr_0651 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Arcpr_1244 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Arcpr_1270 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Arcpr_0591 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Arcpr_0274 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:apo03000] D Arcpr_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Arcpr_0058 TATA-box binding family protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Arcpr_0628 transcriptional regulator, AsnC family K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D Arcpr_0432 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Arcpr_0304 hypothetical protein K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Arcpr_0914 hypothetical protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Arcpr_0812 transcriptional regulator, ArsR family K07721 K07721; ArsR family transcriptional regulator D Arcpr_0048 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator D Arcpr_0156 iron (metal) dependent repressor, DtxR family K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D Arcpr_1817 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Arcpr_0464 transcriptional regulator, TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D Arcpr_0186 phosphoribosyltransferase K26599 gfcR; HTH-type transcriptional regulator, activator of D-glucose/D-fructose catabolism D Arcpr_0671 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D Arcpr_1815 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein D Arcpr_1421 transcriptional regulator, XRE family K07728 K07728; putative transcriptional regulator D Arcpr_1839 transcriptional regulator protein-like protein K07730 K07730; putative transcriptional regulator D Arcpr_0143 transcriptional regulator, XRE family K07731 K07731; putative transcriptional regulator D Arcpr_0175 putative transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Arcpr_0927 transcriptional regulator NikR, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator C 03021 Transcription machinery [BR:apo03021] D Arcpr_0045 Transcription factor TFIIB cyclin-related protein K03124 TFIIB; transcription initiation factor TFIIB D Arcpr_0058 TATA-box binding family protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein D Arcpr_1820 Transcription factor TFIIE, alpha subunit K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha D Arcpr_0602 DNA-directed RNA polymerase subunit E, RpoE2 K15171 SUPT4H1; transcription elongation factor SPT4 D Arcpr_0880 NusG antitermination factor K15172 SUPT5H; transcription elongation factor SPT5 D Arcpr_0930 protein of unknown function ATP binding protein K24104 GPN; GPN-loop GTPase D Arcpr_0096 protein of unknown function ATP binding protein K24104 GPN; GPN-loop GTPase D Arcpr_0981 NusA family KH domain protein K02600 nusA; transcription termination/antitermination protein NusA D Arcpr_0978 DNA-directed RNA polymerase subunit A' K03041 rpoA1; DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] D Arcpr_0979 DNA-directed RNA polymerase, subunit A'' K03042 rpoA2; DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] D Arcpr_0977 RNA polymerase Rpb2 domain 6 K03044 rpoB1; DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] D Arcpr_0976 RNA polymerase beta subunit K03045 rpoB2; DNA-directed RNA polymerase subunit B" [EC:2.7.7.6] D Arcpr_1028 RNA polymerase insert K03047 rpoD; DNA-directed RNA polymerase subunit D [EC:2.7.7.6] D Arcpr_0601 DNA-directed RNA polymerase K03049 rpoE1; DNA-directed RNA polymerase subunit E' [EC:2.7.7.6] D Arcpr_1233 RNA polymerase Rpb4 K03051 rpoF; DNA-directed RNA polymerase subunit F [EC:2.7.7.6] D Arcpr_0975 RNA polymerase Rpb5 K03053 rpoH; DNA-directed RNA polymerase subunit H [EC:2.7.7.6] D Arcpr_0129 RNA polymerase Rpb6 K03055 rpoK; DNA-directed RNA polymerase subunit K [EC:2.7.7.6] D Arcpr_0725 RNA polymerase dimerization K03056 rpoL; DNA-directed RNA polymerase subunit L [EC:2.7.7.6] D Arcpr_0130 RNA polymerase, N/8 Kd subunit K03058 rpoN; DNA-directed RNA polymerase subunit N [EC:2.7.7.6] D Arcpr_0526 RNA polymerase Rbp10 K03059 rpoP; DNA-directed RNA polymerase subunit P [EC:2.7.7.6] D Arcpr_0805 transcription termination factor Tfs K03057 tfs; transcription factor S C 03019 Messenger RNA biogenesis [BR:apo03019] D Arcpr_0602 DNA-directed RNA polymerase subunit E, RpoE2 K15171 SUPT4H1; transcription elongation factor SPT4 D Arcpr_0880 NusG antitermination factor K15172 SUPT5H; transcription elongation factor SPT5 D Arcpr_1110 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Arcpr_0030 translation factor pelota K06965 PELO; protein pelota D Arcpr_0490 peptide chain release factor eRF/aRF, subunit 1 K03265 ETF1; peptide chain release factor subunit 1 D Arcpr_0586 protein synthesis factor GTP-binding protein K03231 EEF1A; elongation factor 1-alpha D Arcpr_1327 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha D Arcpr_0511 KH type 1 domain protein K03679 RRP4; exosome complex component RRP4 D Arcpr_0512 exosome complex exonuclease 1 K11600 RRP41; exosome complex component RRP41 D Arcpr_0513 3' exoribonuclease K12589 RRP42; exosome complex component RRP42 D Arcpr_0194 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 03041 Spliceosome [BR:apo03041] C 03011 Ribosome [BR:apo03011] D Arcpr_0797 ribosomal protein S3Ae K02984 RP-S3Ae; small subunit ribosomal protein S3Ae D Arcpr_1349 Ribosomal protein S4E, central domain protein K02987 RP-S4e; small subunit ribosomal protein S4e D Arcpr_0876 Ribosomal protein S6e K02991 RP-S6e; small subunit ribosomal protein S6e D Arcpr_0282 ribosomal protein S8e K02995 RP-S8e; small subunit ribosomal protein S8e D Arcpr_1092 conserved hypothetical protein K02962 RP-S17e; small subunit ribosomal protein S17e D Arcpr_0239 Ribosomal protein S19e K02966 RP-S19e; small subunit ribosomal protein S19e D Arcpr_0604 Ribosomal protein S24e K02974 RP-S24e; small subunit ribosomal protein S24e D Arcpr_0730 hypothetical protein K02976 RP-S26e; small subunit ribosomal protein S26e D Arcpr_1739 Ribosomal protein S27E K02978 RP-S27e; small subunit ribosomal protein S27e D Arcpr_0605 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Arcpr_0495 Ribosomal protein S28e K02979 RP-S28e; small subunit ribosomal protein S28e D Arcpr_1360 ribosomal protein L4/L1e K02930 RP-L4e; large subunit ribosomal protein L4e D Arcpr_0494 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Arcpr_1467 ribosomal protein L10.e K02866 RP-L10e; large subunit ribosomal protein L10e D Arcpr_0065 Ribosomal protein L15e K02877 RP-L15e; large subunit ribosomal protein L15e D Arcpr_0133 ribosomal protein L15 K02883 RP-L18e; large subunit ribosomal protein L18e D Arcpr_1343 Ribosomal protein L19e K02885 RP-L19e; large subunit ribosomal protein L19e D Arcpr_1234 Ribosomal protein L21e K02889 RP-L21e; large subunit ribosomal protein L21e D Arcpr_0496 Ribosomal protein L24E K02896 RP-L24e; large subunit ribosomal protein L24e D Arcpr_0980 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02908 RP-L30e; large subunit ribosomal protein L30e D Arcpr_0236 Ribosomal protein L31e K02910 RP-L31e; large subunit ribosomal protein L31e D Arcpr_1344 Ribosomal protein L32e K02912 RP-L32e; large subunit ribosomal protein L32e D Arcpr_0993 Ribosomal protein L37e K02922 RP-L37e; large subunit ribosomal protein L37e D Arcpr_0525 ribosomal protein L37a K02921 RP-L37Ae; large subunit ribosomal protein L37Ae D Arcpr_0237 Ribosomal protein L39e K02924 RP-L39e; large subunit ribosomal protein L39e D Arcpr_0963 Ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Arcpr_1740 Ribosomal protein L44E K02929 RP-L44e; large subunit ribosomal protein L44e D Arcpr_0938 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D Arcpr_1355 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D Arcpr_1026 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D Arcpr_1341 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D Arcpr_0983 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D Arcpr_1346 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D Arcpr_0131 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D Arcpr_1326 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D Arcpr_1027 ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D Arcpr_0982 ribosomal protein S23 (S12) K02950 RP-S12; small subunit ribosomal protein S12 D Arcpr_1025 ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D Arcpr_1347 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D Arcpr_1076 Ribosomal S13S15 domain protein K02956 RP-S15; small subunit ribosomal protein S15 D Arcpr_1352 ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D Arcpr_1357 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D Arcpr_1734 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D Arcpr_1358 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D Arcpr_1361 ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D Arcpr_1345 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D Arcpr_1735 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D Arcpr_0881 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D Arcpr_0132 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D Arcpr_1351 ribosomal protein L14b/L23e K02874 RP-L14; large subunit ribosomal protein L14 D Arcpr_1339 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D Arcpr_1342 ribosomal protein L18P/L5E K02881 RP-L18; large subunit ribosomal protein L18 D Arcpr_1356 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D Arcpr_1359 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23 D Arcpr_1350 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D Arcpr_1354 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D Arcpr_1340 ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Arcpr_1736 ribosomal protein 60S K02869 RP-L12; large subunit ribosomal protein L12 D Arcpr_0234 Ribosomal LX protein K02944 RP-LX; large subunit ribosomal protein LX D Arcpr_R0053 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Arcpr_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Arcpr_R0039 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:apo03009] D Arcpr_0701 Pre-mRNA processing ribonucleoprotein, binding domain protein K14564 NOP56; nucleolar protein 56 D Arcpr_1854 rRNA pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D Arcpr_0363 RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D Arcpr_1656 exosome subunit/U3 small nucleolar ribonucleoprotein (snoRNP) component contains IMP4 domain-like protein K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D Arcpr_0385 Suppressor Mra1 family protein K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D Arcpr_0759 KH type 1 domain protein K06961 KRR1; ribosomal RNA assembly protein D Arcpr_0760 Non-specific serine/threonine protein kinase K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Arcpr_0727 protein of unknown function RIO1 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] D Arcpr_0279 Adenylate kinase K18532 AK6; adenylate kinase [EC:2.7.4.3] D Arcpr_0166 ABC transporter related protein K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 D Arcpr_1572 small GTP-binding protein K06943 NOG1; nucleolar GTP-binding protein D Arcpr_1353 Ribonuclease P, Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Arcpr_0508 Ribonuclease P-related protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Arcpr_0022 RNase P subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D Arcpr_1103 GTPase or GTP-binding protein-like protein K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] D Arcpr_0235 translation initiation factor eIF-6 K03264 EIF6; translation initiation factor 6 D Arcpr_0696 NMD3 family protein K07562 NMD3; 60S ribosomal export protein NMD3 D Arcpr_0510 Shwachman-Bodian-Diamond syndrome protein K14574 SDO1; ribosome maturation protein SDO1 D Arcpr_1110 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Arcpr_0562 Protein of unknown function UPF0113 K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D Arcpr_0482 small GTP-binding protein K03595 era; GTPase D Arcpr_0813 fibrillarin K04795 flpA; fibrillarin-like pre-rRNA processing protein D Arcpr_0494 ribosomal protein L7Ae/L30e/S12e/Gadd45 K02936 RP-L7Ae; large subunit ribosomal protein L7Ae D Arcpr_0981 NusA family KH domain protein K02600 nusA; transcription termination/antitermination protein NusA D Arcpr_0073 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Arcpr_0249 RNA methylase, NOL1/NOP2/sun family K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Arcpr_0344 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Arcpr_0643 RNA-binding S4 domain protein K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Arcpr_1439 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Arcpr_0961 ribosomal RNA methyltransferase RrmJ/FtsJ K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Arcpr_0447 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Arcpr_0106 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Arcpr_0240 protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Arcpr_0351 GTPase of unknown function domain protein K06942 ychF; ribosome-binding ATPase C 03016 Transfer RNA biogenesis [BR:apo03016] D Arcpr_1353 Ribonuclease P, Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Arcpr_0508 Ribonuclease P-related protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Arcpr_0022 RNase P subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D Arcpr_1294 RNAse P, Rpr2/Rpp21 subunit K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5] D Arcpr_1325 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D Arcpr_0802 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Arcpr_1737 protein of unknown function DUF101 K24956 ZBTB8OS; protein archease D Arcpr_0586 protein synthesis factor GTP-binding protein K03231 EEF1A; elongation factor 1-alpha D Arcpr_1327 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha D Arcpr_0561 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Arcpr_0757 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Arcpr_0361 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Arcpr_1287 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Arcpr_0221 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Arcpr_0103 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Arcpr_0078 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Arcpr_0214 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Arcpr_0164 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Arcpr_0795 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Arcpr_0443 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Arcpr_0003 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Arcpr_1598 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Arcpr_0815 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Arcpr_1560 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Arcpr_0064 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Arcpr_0578 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Arcpr_1124 Protein of unknown function DUF516 K09716 dtdA; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Arcpr_0426 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Arcpr_1136 MiaB-like tRNA modifying enzyme K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5] D Arcpr_0217 N2,N2-dimethylguanosine tRNA methyltransferase K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] D Arcpr_0478 protein of unknown function Met10 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Arcpr_1837 tRNA methyltransferase complex GCD14 subunit K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220] D Arcpr_1826 Wyosine base formation domain protein K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44] D Arcpr_0697 protein of unknown function Met10 K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114] D Arcpr_0077 Protein of unknown function DUF207 K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282] D Arcpr_0332 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Arcpr_0468 tRNA pseudouridine synthase D TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D Arcpr_0709 pseudouridylate synthase-like protein K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25] D Arcpr_0799 Mn2+dependent serine/threonine protein kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1] D Arcpr_0606 metalloendopeptidase, glycoprotease family K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234] D Arcpr_0741 histone acetyltransferase, ELP3 family K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311] D Arcpr_0106 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Arcpr_1829 THUMP domain protein K06963 TAN1; tRNA acetyltransferase TAN1 D Arcpr_R0017 Archaeal RNase P as predicted by Rfam (RF00373), score 141.86 K01978 rnpB; M1 RNA D Arcpr_0320 Protein of unknown function UPF0278 K09006 K09006; RNA-free ribonuclease P [EC:3.1.26.5] D Arcpr_0090 tRNA adenylyltransferase K07558 K07558; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] D Arcpr_1556 tRNA intron endonuclease K01170 endA; tRNA-intron endonuclease, archaea type [EC:4.6.1.16] D Arcpr_1559 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Arcpr_0358 phosphotransferase KptA/Tpt1 K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D Arcpr_1009 phosphotransferase KptA/Tpt1 K07559 kptA; putative RNA 2'-phosphotransferase [EC:2.7.1.-] D Arcpr_1590 lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6] D Arcpr_0998 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23] D Arcpr_1311 O-phosphoseryl-tRNA(Cys) synthetase K07587 sepRS; O-phosphoseryl-tRNA synthetase [EC:6.1.1.27] D Arcpr_0056 Sep-tRNA K06868 sepcysS; Sep-tRNA:Cys-tRNA synthetase [EC:2.5.1.73] D Arcpr_1449 protein of unknown function DUF358 K16317 trmY; tRNA (pseudouridine54-N1)-methyltransferase [EC:2.1.1.257] D Arcpr_0486 RNA methylase, NOL1/NOP2/sun family K22901 trm4; tRNA (cytosine40_48-C5)-methyltransferase [EC:2.1.1.-] D Arcpr_0444 tRNA (guanine-N1-)-methyltransferase K15566 trm10; tRNA (adenine9-N1/guanine9-N1)-methyltransferase [EC:2.1.1.218 2.1.1.221] D Arcpr_1458 putative RNA methylase K16318 trm14; tRNA (guanine6-N2)-methyltransferase [EC:2.1.1.256] D Arcpr_1299 putative RNA methylase K07446 trm-G10; tRNA (guanine10-N2)-dimethyltransferase [EC:2.1.1.213] D Arcpr_0987 protein of unknown function DUF127 K07254 atrm56; tRNA (cytidine56-2'-O)-methyltransferase [EC:2.1.1.206] D Arcpr_0582 RNA methylase, NOL1/NOP2/sun family K22446 K22446; tRNA (cytosine49-C5)-methyltransferase [EC:2.1.1.-] D Arcpr_0758 PP-loop domain protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15] D Arcpr_0547 Protein of unknown function DUF509 K09119 cgi121; KEOPS complex subunit Cgi121 D Arcpr_1655 hypothetical protein K09741 pcc1; KEOPS complex subunit Pcc1 D Arcpr_0465 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Arcpr_1622 GTP cyclohydrolase I K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Arcpr_1823 archaeosine tRNA-ribosyltransferase K18779 tgtA; 7-cyano-7-deazaguanine tRNA-ribosyltransferase [EC:2.4.2.48] D Arcpr_0189 thiamine biosynthesis/tRNA modification protein ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D Arcpr_0648 domain of unknown function DUF1743 K06932 tiaS; tRNA(Ile2)-agmatinylcytidine synthase [EC:6.3.4.22] D Arcpr_1081 protein of unknown function DUF699 ATPase putative K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] C 03012 Translation factors [BR:apo03012] D Arcpr_0063 translation initiation factor eIF-1A K03236 EIF1A; translation initiation factor 1A D Arcpr_0331 translation initiation factor SUI1 K03113 EIF1; translation initiation factor 1 D Arcpr_0044 translation initiation factor 2, alpha subunit K03237 EIF2S1; translation initiation factor 2 subunit 1 D Arcpr_0340 translation initiation factor aIF-2, beta subunit K03238 EIF2S2; translation initiation factor 2 subunit 2 D Arcpr_0327 protein synthesis factor GTP-binding protein K03242 EIF2S3; translation initiation factor 2 subunit 3 D Arcpr_1056 initiation factor 2B related protein K03680 EIF2B4; translation initiation factor eIF-2B subunit delta D Arcpr_1100 translation initiation factor eIF-5A K03263 EIF5A; translation initiation factor 5A D Arcpr_0499 translation initiation factor aIF-2 K03243 EIF5B; translation initiation factor 5B D Arcpr_0235 translation initiation factor eIF-6 K03264 EIF6; translation initiation factor 6 D Arcpr_0586 protein synthesis factor GTP-binding protein K03231 EEF1A; elongation factor 1-alpha D Arcpr_1327 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha D Arcpr_0953 translation elongation factor aEF-1 beta K03232 EEF1B; elongation factor 1-beta D Arcpr_0984 translation elongation factor aEF-2 K03234 EEF2; elongation factor 2 D Arcpr_1300 diphthamide biosynthesis protein K07561 DPH1; 2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108] D Arcpr_0678 ATP binding protein K06927 DPH6; diphthine-ammonia ligase [EC:6.3.1.14] D Arcpr_0490 peptide chain release factor eRF/aRF, subunit 1 K03265 ETF1; peptide chain release factor subunit 1 D Arcpr_0071 methylase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Arcpr_1709 Aminoacyl-tRNA hydrolase K04794 PTH2; peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] C 03110 Chaperones and folding catalysts [BR:apo03110] D Arcpr_0266 thermosome K22447 cct; archaeal chaperonin D Arcpr_1420 thermosome K22447 cct; archaeal chaperonin D Arcpr_1089 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Arcpr_0810 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Arcpr_0233 prefoldin, alpha subunit K04797 pfdA; prefoldin alpha subunit D Arcpr_1654 prefoldin, beta subunit K04798 pfdB; prefoldin beta subunit D Arcpr_0313 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Arcpr_0312 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Arcpr_1105 peptidylprolyl isomerase FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Arcpr_0016 thioredoxin K03671 TXN; thioredoxin D Arcpr_0827 Thioredoxin domain protein K03671 TXN; thioredoxin D Arcpr_0986 Thioredoxin domain protein K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:apo04131] D Arcpr_0498 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Arcpr_1110 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Arcpr_0325 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Arcpr_0879 protein translocase SEC61 complex, gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D Arcpr_0586 protein synthesis factor GTP-binding protein K03231 EEF1A; elongation factor 1-alpha D Arcpr_1327 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha C 04121 Ubiquitin system [BR:apo04121] D Arcpr_0963 Ribosomal protein L40e K02927 RP-L40e; ubiquitin-large subunit ribosomal protein L40e D Arcpr_0605 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae C 03051 Proteasome [BR:apo03051] D Arcpr_0509 Proteasome endopeptidase complex K03432 psmA; proteasome alpha subunit [EC:3.4.25.1] D Arcpr_0441 Proteasome endopeptidase complex K03433 psmB; proteasome beta subunit [EC:3.4.25.1] D Arcpr_1629 26S proteasome subunit P45 family K03420 psmR; proteasome regulatory subunit C 03032 DNA replication proteins [BR:apo03032] D Arcpr_1253 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Arcpr_1473 XPG I domain protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Arcpr_0546 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Arcpr_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Arcpr_0363 RNA-binding protein Nop10p K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D Arcpr_1854 rRNA pseudouridine synthase K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D Arcpr_1825 TOPRIM domain protein K02316 dnaG; DNA primase [EC:2.7.7.101] D Arcpr_0001 orc1/cdc6 family replication initiation protein K10725 cdc6A; archaeal cell division control protein 6 D Arcpr_1164 orc1/cdc6 family replication initiation protein K10725 cdc6A; archaeal cell division control protein 6 D Arcpr_1167 Cdc6-related protein AAA superfamily ATPase-like protein K10725 cdc6A; archaeal cell division control protein 6 D Arcpr_0792 MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Arcpr_0832 MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Arcpr_1699 MCM family protein K10726 mcm; replicative DNA helicase Mcm [EC:5.6.2.3] D Arcpr_1801 DNA primase, small subunit K02683 priS; DNA primase small subunit [EC:2.7.7.102] D Arcpr_1254 DNA primase, large subunit K18882 priL; DNA primase large subunit D Arcpr_0121 hypothetical protein K18882 priL; DNA primase large subunit D Arcpr_1802 hypothetical protein K09723 ginS; DNA replication factor GINS D Arcpr_0017 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Arcpr_0273 DNA polymerase Pol2 K02319 pol; DNA polymerase, archaea type [EC:2.7.7.7] D Arcpr_1565 DNA polymerase II, large subunit DP2 K02322 polC; DNA polymerase II large subunit [EC:2.7.7.7] D Arcpr_0397 DNA-directed DNA polymerase K02323 polB; DNA polymerase II small subunit [EC:2.7.7.7] D Arcpr_0770 AAA ATPase central domain protein K04800 rfcL; replication factor C large subunit D Arcpr_0505 Replication factor C K04801 rfcS; replication factor C small subunit D Arcpr_1436 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Arcpr_0091 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Arcpr_1031 DNA topoisomerase (ATP-hydrolyzing) K03166 top6A; DNA topoisomerase VI subunit A [EC:5.6.2.2] D Arcpr_1283 DNA topoisomerase VI, B subunit K03167 top6B; DNA topoisomerase VI subunit B [EC:5.6.2.2] D Arcpr_0283 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Arcpr_0926 reverse gyrase K03170 topG; reverse gyrase [EC:5.6.2.2 5.6.2.-] C 03036 Chromosome and associated proteins [BR:apo03036] D Arcpr_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Arcpr_1362 Protein of unknown function DUF171 K09142 SPOUT1; methyltransferase [EC:2.1.1.-] D Arcpr_0246 Transcription factor CBF/NF-Y/histone domain protein K24450 hmf; DNA-binding protein D Arcpr_0190 Transcription factor CBF/NF-Y/histone domain protein K24450 hmf; DNA-binding protein D Arcpr_0432 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Arcpr_0040 chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Arcpr_0039 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A D Arcpr_0038 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B D Arcpr_0356 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Arcpr_1811 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Arcpr_1631 Actin-like protein ATPase involved in cell morphogenesis-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D Arcpr_1475 integrase family protein K04763 xerD; integrase/recombinase XerD D Arcpr_0434 iron-sulfur cluster assembly/repair protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D Arcpr_1452 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning C 03400 DNA repair and recombination proteins [BR:apo03400] D Arcpr_1424 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Arcpr_0339 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Arcpr_1253 proliferating cell nuclear antigen PcnA K04802 PCNA; proliferating cell nuclear antigen D Arcpr_1473 XPG I domain protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Arcpr_0546 DNA ligase I, ATP-dependent Dnl1 K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] D Arcpr_0804 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Arcpr_1850 protein of unknown function UPF0066 K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Arcpr_1714 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Arcpr_0923 Xylose isomerase domain protein TIM barrel K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D Arcpr_1079 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D Arcpr_1137 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Arcpr_1312 phosphoesterase RecJ domain protein K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Arcpr_0122 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Arcpr_1050 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Arcpr_0060 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50 D Arcpr_0059 metallophosphoesterase K03547 sbcD; DNA repair protein SbcD/Mre11 D Arcpr_1402 DNA repair and recombination protein RadA K04483 radA; DNA repair protein RadA D Arcpr_1112 DNA repair and recombination protein RadB K04484 radB; DNA repair protein RadB D Arcpr_1265 Resolvase, Holliday junction-type K03552 hjr; holliday junction resolvase [EC:3.1.21.10] D Arcpr_0654 protein of unknown function DUF87 K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D Arcpr_0061 conserved hypothetical protein K25510 nurA; DNA double-strand break repair nuclease NurA [EC:3.1.-.-] D Arcpr_1436 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Arcpr_0091 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Arcpr_0283 DNA topoisomerase K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D Arcpr_0137 DEAD/DEAH box helicase domain protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Arcpr_1657 transcriptional regulator, XRE family K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D Arcpr_0215 Protein of unknown function DUF650 K22585 nreA; DNA repair protein NreA C 03029 Mitochondrial biogenesis [BR:apo03029] D Arcpr_1353 Ribonuclease P, Rpp29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] D Arcpr_0508 Ribonuclease P-related protein K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] D Arcpr_0022 RNase P subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] D Arcpr_0482 small GTP-binding protein K03595 era; GTPase D Arcpr_0064 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Arcpr_1287 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Arcpr_0214 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14] D Arcpr_0103 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Arcpr_1310 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Arcpr_0503 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Arcpr_1309 glutamyl-tRNA(Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Arcpr_0434 iron-sulfur cluster assembly/repair protein K03593 mrp; ATP-binding protein involved in chromosome partitioning D Arcpr_1452 Cobyrinic acid ac-diamide synthase K03593 mrp; ATP-binding protein involved in chromosome partitioning D Arcpr_0935 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:apo02000] D Arcpr_1814 extracellular solute-binding protein family 1 K15495 wtpA; molybdate/tungstate transport system substrate-binding protein D Arcpr_1813 binding-protein-dependent transport systems inner membrane component K15496 wtpB; molybdate/tungstate transport system permease protein D Arcpr_1812 ABC transporter related protein K15497 wtpC; molybdate/tungstate transport system ATP-binding protein [EC:7.3.2.5 7.3.2.6] D Arcpr_0097 phosphate ABC transporter, periplasmic phosphate-binding protein K02040 pstS; phosphate transport system substrate-binding protein D Arcpr_0098 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein D Arcpr_0099 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein D Arcpr_0100 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Arcpr_0202 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Arcpr_1322 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Arcpr_1844 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein D Arcpr_0203 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Arcpr_1321 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Arcpr_1845 inner-membrane translocator K01997 livH; branched-chain amino acid transport system permease protein D Arcpr_0204 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Arcpr_1320 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Arcpr_1846 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein D Arcpr_0201 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Arcpr_1323 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Arcpr_1847 ABC transporter related protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D Arcpr_0200 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Arcpr_1324 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Arcpr_1848 ABC transporter related protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D Arcpr_0089 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Arcpr_0088 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Arcpr_0087 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Arcpr_0086 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein D Arcpr_1065 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Arcpr_1014 periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Arcpr_1064 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Arcpr_1013 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Arcpr_1012 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Arcpr_1566 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Arcpr_1063 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Arcpr_0298 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein D Arcpr_0297 transport system permease protein K25027 btuC; cobalamin transport system permease protein D Arcpr_0416 cobalt ABC transporter, inner membrane subunit CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D Arcpr_0418 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Arcpr_0415 cobalt ABC transporter, ATPase subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Arcpr_0419 ABC-type Co2+ transport system periplasmic component-like protein K10094 cbiK; nickel transport protein D Arcpr_0417 hypothetical protein K16915 cbiL; nickel transport protein D Arcpr_0585 BioY protein K03523 bioY; biotin transport system substrate-specific component D Arcpr_0583 hypothetical protein K16785 ecfT; energy-coupling factor transport system permease protein D Arcpr_0584 ABC transporter related protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D Arcpr_0177 periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Arcpr_0176 ABC-3 protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Arcpr_0178 ABC transporter related protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D Arcpr_1205 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein D Arcpr_1206 ABC transporter related protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14] D Arcpr_0638 cytochrome c assembly protein K02195 ccmC; heme exporter protein C D Arcpr_1289 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein D Arcpr_0964 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Arcpr_1288 daunorubicin resistance ABC transporter ATPase subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Arcpr_0684 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Arcpr_0683 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Arcpr_0365 ABC transporter related protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D Arcpr_0968 major facilitator superfamily MFS_1 K08221 yitG; MFS transporter, ACDE family, multidrug resistance protein D Arcpr_1115 TrkA-N domain protein K10716 kch; voltage-gated potassium channel D Arcpr_0290 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog D Arcpr_1246 MgtE integral membrane region K07244 K07244; mgtE-like transporter D Arcpr_1222 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Arcpr_1440 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Arcpr_1455 sodium/calcium exchanger membrane region K07301 yrbG; cation:H+ antiporter D Arcpr_0753 TrkA-C domain protein K07228 khtT; K+:H+ antiporter subunit KhtT D Arcpr_0752 sodium/hydrogen exchanger K26732 khtU; K+:H+ antiporter subunit KhtU D Arcpr_0354 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein D Arcpr_0148 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein D Arcpr_0429 TrkA-C domain protein K03499 trkA; trk/ktr system potassium uptake protein D Arcpr_1408 permease for cytosine/purines uracil thiamine allantoin K10974 codB; cytosine permease D Arcpr_0192 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease D Arcpr_1109 Chloride channel core K03281 clcA; chloride channel protein, CIC family D Arcpr_0325 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Arcpr_0600 AzlC family protein K26605 azlC; branched chain amino acid efflux pump D Arcpr_0599 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump D Arcpr_1331 conserved hypothetical protein K09125 yhhQ; queuosine precursor transporter D Arcpr_0530 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein D Arcpr_1535 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma D Arcpr_0155 FeoA family protein K04758 feoA; ferrous iron transport protein A D Arcpr_0157 FeoA family protein K04758 feoA; ferrous iron transport protein A D Arcpr_0151 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D Arcpr_0637 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF C 02044 Secretion system [BR:apo02044] D Arcpr_1390 flagellin K07325 flaB; archaeal flagellin FlaB D Arcpr_1391 flagellin K07325 flaB; archaeal flagellin FlaB D Arcpr_1387 flagellin K07329 flaF; archaeal flagellar protein FlaF D Arcpr_1388 hypothetical protein K07330 flaG; archaeal flagellar protein FlaG D Arcpr_1386 ATPase involved in biogenesis of flagella-like protein K07331 flaH; archaeal flagellar protein FlaH D Arcpr_1385 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Arcpr_0721 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Arcpr_1313 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Arcpr_1384 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ D Arcpr_1314 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ D Arcpr_0720 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ D Arcpr_0277 Peptidase A24B, FlaK domain protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] D Arcpr_0453 hypothetical protein K22228 secG; preprotein translocase subunit SecG D Arcpr_1338 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY D Arcpr_1035 GTP-binding signal recognition particle SRP54 G-domain protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Arcpr_0232 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Arcpr_0879 protein translocase SEC61 complex, gamma subunit K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins D Arcpr_1298 Ribonucleoprotein complex SRP, Srp19 component K03105 SRP19; signal recognition particle subunit SRP19 D Arcpr_1099 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA D Arcpr_1098 sec-independent translocation protein mttA/Hcf106 K03117 tatB; sec-independent protein translocase protein TatB D Arcpr_0149 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC D Arcpr_1021 Sec-independent periplasmic protein translocase K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:apo02042] C 02022 Two-component system [BR:apo02022] D Arcpr_1374 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Arcpr_0537 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_0996 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_1376 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_1375 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Arcpr_1477 hypothetical protein K07183 nasT; two-component system, response regulator / RNA-binding antiterminator C 02035 Bacterial motility proteins [BR:apo02035] D Arcpr_1374 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Arcpr_1378 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW D Arcpr_1373 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC D Arcpr_1372 CheD, stimulates methylation of MCP protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Arcpr_1371 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Arcpr_1375 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Arcpr_0537 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_0996 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_1376 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Arcpr_1090 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Arcpr_1367 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Arcpr_1379 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor K03406 mcp; methyl-accepting chemotaxis protein D Arcpr_1390 flagellin K07325 flaB; archaeal flagellin FlaB D Arcpr_1391 flagellin K07325 flaB; archaeal flagellin FlaB D Arcpr_1387 flagellin K07329 flaF; archaeal flagellar protein FlaF D Arcpr_1388 hypothetical protein K07330 flaG; archaeal flagellar protein FlaG D Arcpr_1386 ATPase involved in biogenesis of flagella-like protein K07331 flaH; archaeal flagellar protein FlaH D Arcpr_1385 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Arcpr_0721 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Arcpr_1313 type II secretion system protein E K07332 flaI; archaeal flagellar protein FlaI D Arcpr_1384 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ D Arcpr_1314 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ D Arcpr_0720 type II secretion system protein K07333 flaJ; archaeal flagellar protein FlaJ D Arcpr_0277 Peptidase A24B, FlaK domain protein K07991 flaK; archaeal preflagellin peptidase FlaK [EC:3.4.23.52] C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:apo04812] D Arcpr_1045 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein D Arcpr_1631 Actin-like protein ATPase involved in cell morphogenesis-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D Arcpr_0356 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Arcpr_1811 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Arcpr_0398 Cell division GTPase-like protein K22222 cetZ; tubulin-like protein CetZ D Arcpr_1418 Tubulin/FtsZ GTPase K22222 cetZ; tubulin-like protein CetZ C 04147 Exosome [BR:apo04147] D Arcpr_0194 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Arcpr_0350 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Arcpr_0629 Peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Arcpr_0586 protein synthesis factor GTP-binding protein K03231 EEF1A; elongation factor 1-alpha D Arcpr_1327 translation elongation factor EF-1, subunit alpha K03231 EEF1A; elongation factor 1-alpha D Arcpr_0984 translation elongation factor aEF-2 K03234 EEF2; elongation factor 2 D Arcpr_1473 XPG I domain protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-] D Arcpr_0605 Ribosomal protein S27a K02977 RP-S27Ae; ubiquitin-small subunit ribosomal protein S27Ae D Arcpr_1110 AAA family ATPase, CDC48 subfamily K13525 VCP; transitional endoplasmic reticulum ATPase D Arcpr_0426 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Arcpr_0145 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1086 AtoB5 K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Arcpr_1447 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Arcpr_1334 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Arcpr_0227 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Arcpr_1571 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Arcpr_0382 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Arcpr_1433 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Arcpr_0691 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D Arcpr_0921 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Arcpr_0267 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 02048 Prokaryotic defense system [BR:apo02048] D Arcpr_1430 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Arcpr_1431 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Arcpr_0378 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Arcpr_1781 ATPase associated with various cellular activities AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-] D Arcpr_1688 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Arcpr_0565 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D Arcpr_0864 hypothetical protein K06218 relE; mRNA interferase RelE/StbE D Arcpr_0918 hypothetical protein K19164 ccdA; antitoxin CcdA D Arcpr_1531 hypothetical protein K19164 ccdA; antitoxin CcdA D Arcpr_0355 putative transcriptional regulators, CopG/Arc/MetJ family K07746 parD1_3_4; antitoxin ParD1/3/4 D Arcpr_0356 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Arcpr_1811 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Arcpr_1631 Actin-like protein ATPase involved in cell morphogenesis-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D Arcpr_0561 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Arcpr_0187 protein; K11883 RNA-binding protein NOB1 K07060 nob1; endoribonuclease Nob1 [EC:3.1.-.-] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:apo03100] D Arcpr_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Arcpr_R0052 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Arcpr_R0040 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Arcpr_R0001 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0016 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0010 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0036 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Arcpr_R0047 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Arcpr_R0049 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Arcpr_R0015 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Arcpr_R0006 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Arcpr_R0035 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Arcpr_R0011 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Arcpr_R0050 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Arcpr_R0018 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Arcpr_R0048 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Arcpr_R0005 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Arcpr_R0037 tRNA-His K14226 tRNA-His; tRNA His D Arcpr_R0027 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Arcpr_R0038 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Arcpr_R0051 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0046 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0044 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Arcpr_R0026 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Arcpr_R0003 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Arcpr_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Arcpr_R0002 tRNA-Met K14230 tRNA-Met; tRNA Met D Arcpr_R0022 tRNA-Met K14230 tRNA-Met; tRNA Met D Arcpr_R0028 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Arcpr_R0024 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Arcpr_R0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Arcpr_R0004 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Arcpr_R0013 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Arcpr_R0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Arcpr_R0008 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Arcpr_R0045 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Arcpr_R0031 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Arcpr_R0029 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Arcpr_R0042 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Arcpr_R0019 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Arcpr_R0009 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Arcpr_R0043 tRNA-Val K14237 tRNA-Val; tRNA Val D Arcpr_R0014 tRNA-Val K14237 tRNA-Val; tRNA Val D Arcpr_R0030 tRNA-Val K14237 tRNA-Val; tRNA Val D Arcpr_R0041 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Arcpr_R0039 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Arcpr_R0053 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Arcpr_R0032 signal recognition particle RNA predicted by Rfam(RF 00017), score 94.18 K01983 ffs; SRP RNA D Arcpr_R0033 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA D Arcpr_R0017 Archaeal RNase P as predicted by Rfam (RF00373), score 141.86 K01978 rnpB; M1 RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Arcpr_1579 hypothetical protein K22171 fqoA; F420H2:quinone oxidoreductase subunit A [EC:1.1.98.4] D Arcpr_1578 NADH-quinone oxidoreductase, B subunit K22172 fqoBC; F420H2:quinone oxidoreductase subunit B/C [EC:1.1.98.4] D Arcpr_1575 Coenzyme F420 hydrogenase K22174 fqoF; F420H2:quinone oxidoreductase subunit F [EC:1.1.98.4] D Arcpr_1577 respiratory-chain NADH dehydrogenase subunit 1 K22175 fqoH; F420H2:quinone oxidoreductase subunit H [EC:1.1.98.4] D Arcpr_1576 4Fe-4S ferredoxin iron-sulfur binding domain protein K22176 fqoI; F420H2:quinone oxidoreductase subunit I [EC:1.1.98.4] D Arcpr_1584 hypothetical protein K22177 fqoJ; F420H2:quinone oxidoreductase subunit J [EC:1.1.98.4] D Arcpr_1583 hypothetical protein K22178 fqoK; F420H2:quinone oxidoreductase subunit K [EC:1.1.98.4] D Arcpr_1581 NADH/Ubiquinone/plastoquinone (complex I) K22179 fqoL; F420H2:quinone oxidoreductase subunit L [EC:1.1.98.4] D Arcpr_1582 NADH/Ubiquinone/plastoquinone (complex I) K22180 fqoM; F420H2:quinone oxidoreductase subunit M [EC:1.1.98.4] D Arcpr_1580 NADH/Ubiquinone/plastoquinone (complex I) K22181 fqoN; F420H2:quinone oxidoreductase subunit N [EC:1.1.98.4] D Arcpr_0407 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Arcpr_1011 indolepyruvate ferredoxin oxidoreductase, beta subunit K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Arcpr_0928 acyl-CoA dehydrogenase domain protein K18244 mmgC; acyl-CoA dehydrogenase [EC:1.3.99.-] D Arcpr_0380 NADPH-dependent F420 reductase K06988 fno; 8-hydroxy-5-deazaflavin:NADPH oxidoreductase [EC:1.5.1.40] D Arcpr_0107 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K17870 nox1; NADH oxidase (H2O2-forming) [EC:1.6.3.3] D Arcpr_0633 Desulfoferrodoxin ferrous iron-binding region K05919 dfx; superoxide reductase [EC:1.15.1.2] D Arcpr_0333 Protein-tyrosine phosphatase, low molecular weight K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Arcpr_1047 Radical SAM domain protein K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D Arcpr_0110 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Arcpr_0710 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Arcpr_1285 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Arcpr_1450 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Arcpr_1852 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Arcpr_0032 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Arcpr_0161 diphthine synthase K20215 dph5; diphthine synthase [EC:2.1.1.98] D Arcpr_0357 deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46] D Arcpr_0370 protein of unknown function DUF43 K07057 bpsA; N4-bis(aminopropyl)spermidine synthase [EC:2.5.1.128] D Arcpr_0659 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143] D Arcpr_1822 PUA domain containing protein K07557 tgtA2; archaeosine synthase alpha-subunit [EC:2.6.1.97 2.6.1.-] D Arcpr_1533 Radical SAM domain protein K06936 raSEA; archaeosine synthase beta-subunit [EC:2.6.1.-] D Arcpr_0653 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D Arcpr_0731 UBA/THIF-type NAD/FAD binding protein K22837 ubaA; SAMP-activating enzyme [EC:2.7.7.100] D Arcpr_0433 CDP-alcohol phosphatidyltransferase K17884 E2.7.8.39; archaetidylinositol phosphate synthase [EC:2.7.8.39] D Arcpr_0533 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Arcpr_0703 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-] D Arcpr_1777 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D Arcpr_0560 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D Arcpr_1782 nuclease (SNase domain protein) K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D Arcpr_0627 DNA-(apurinic or apyrimidinic site) lyase K03653 K03653; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] D Arcpr_0403 ATPase associated with various cellular activities AAA_5 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Arcpr_0319 protein of unknown function DUF62 K22205 E3.13.2.3; S-adenosyl-L-methionine hydrolase (adenosine-forming) [EC:3.13.2.3] D Arcpr_1241 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Arcpr_0047 ExsB family protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37] D Arcpr_1111 conserved hypothetical protein K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12] D Arcpr_0479 RNA 3'-phosphate cyclase K01974 RTCA; RNA 3'-terminal phosphate cyclase (ATP) [EC:6.5.1.4] D Arcpr_1305 ATP dependent DNA ligase K07468 K07468; DNA/RNA ligase [EC:6.5.1.-] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D Arcpr_0670 Uncharacterized protein required for formate dehydrogenase activity-like protein K02379 fdhD; FdhD protein D Arcpr_1260 4Fe-4S ferredoxin iron-sulfur binding domain protein K16885 qmoA; quinone-modifying oxidoreductase, subunit QmoA D Arcpr_1259 methyl-viologen-reducing hydrogenase delta subunit K16886 qmoB; quinone-modifying oxidoreductase, subunit QmoB D Arcpr_1258 heterodisulfide reductase, putative K16887 qmoC; quinone-modifying oxidoreductase, subunit QmoC D Arcpr_0438 amino acid-binding ACT domain protein K06862 ehbQ; energy-converting hydrogenase B subunit Q D Arcpr_0920 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Arcpr_1726 sulfur relay protein, TusE/DsrC/DsvC family K23077 dsrC; dissimilatory sulfite reductase related protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism D Arcpr_0556 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein D Arcpr_1213 conserved hypothetical protein K07027 K07027; glycosyltransferase 2 family protein C 99987 Cofactor metabolism D Arcpr_0439 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism C 99999 Others B B 09192 Unclassified: genetic information processing C 99973 Transcription D Arcpr_1628 transcriptional regulator, XRE family K03627 MBF1; putative transcription factor D Arcpr_0400 DNA-binding protein Alba K03622 ssh10b; archaea-specific DNA-binding protein D Arcpr_0391 DNA-binding protein Alba K03622 ssh10b; archaea-specific DNA-binding protein D Arcpr_0994 Like-Sm ribonucleoprotein core K04796 RUXX; small nuclear ribonucleoprotein D Arcpr_0348 transcriptional regulator K07743 K07743; transcriptional regulator D Arcpr_1712 transcriptional regulator, TrmB K07744 K07744; transcriptional regulator D Arcpr_0315 conserved hypothetical protein K07745 K07745; transcriptional regulator C 99974 Translation D Arcpr_1232 Protein of unknown function DUF655 K07572 K07572; putative nucleotide binding protein D Arcpr_0004 beta-lactamase domain protein K07577 K07577; putative mRNA 3-end processing factor D Arcpr_0724 methyltransferase small K07579 K07579; putative methylase D Arcpr_0954 Protein of unknown function DUF1610 K07580 K07580; Zn-ribbon RNA-binding protein D Arcpr_0023 Protein of unknown function DUF54 K07581 K07581; RNA-binding protein C 99975 Protein processing D Arcpr_0311 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC D Arcpr_0310 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D Arcpr_1227 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Arcpr_1228 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Arcpr_1443 AIR synthase related protein K07388 K07388; hydrogenase expression/formation protein D Arcpr_0751 AAA ATPase central domain protein K07392 PRS2; AAA family ATPase D Arcpr_0261 PUA domain containing protein K07398 K07398; conserved protein with predicted RNA binding PUA domain D Arcpr_0167 protein of unknown function DUF107 K07403 nfeD; membrane-bound serine protease (ClpP class) D Arcpr_1715 hypothetical protein K16511 mecA1_2; adapter protein MecA 1/2 C 99976 Replication and repair D Arcpr_1151 DNA binding domain protein, excisionase family K07450 K07450; putative resolvase D Arcpr_1279 TIP49 domain protein K07472 TIP49; TBP-interacting protein D Arcpr_0401 Translin K07477 K07477; translin D Arcpr_0423 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase D Arcpr_0424 transposase, IS605 OrfB family K07496 K07496; putative transposase D Arcpr_0473 transposase, IS605 OrfB family K07496 K07496; putative transposase D Arcpr_0271 transposase, IS605 OrfB family K07496 K07496; putative transposase D Arcpr_0507 transposase, IS605 OrfB family K07496 K07496; putative transposase D Arcpr_0768 transposase, IS605 OrfB family K07496 K07496; putative transposase D Arcpr_1150 transposase, IS605 OrfB family K07496 K07496; putative transposase D Arcpr_1833 transposase, IS605 OrfB family K07496 K07496; putative transposase C 99979 Viral proteins C 99998 Others B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Arcpr_1238 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Arcpr_1271 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Arcpr_0083 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family D Arcpr_1798 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family C 99978 Cell growth D Arcpr_1036 Cobyrinic acid ac-diamide synthase K07321 cooC; CO dehydrogenase maturation factor D Arcpr_0399 protein of unknown function DUF95 transmembrane K06384 spoIIM; stage II sporulation protein M D Arcpr_1000 SpoVG family protein K06412 spoVG; stage V sporulation protein G C 99993 Cell motility D Arcpr_1377 Protein of unknown function DUF439 K09156 cheF; taxis protein CheF D Arcpr_0818 Protein of unknown function DUF1628 K23255 pilA; archaeal type IV pilus assembly protein PilA C 99995 Signaling proteins D Arcpr_0932 conserved hypothetical protein K07176 K07176; putative serine/threonine protein kinase D Arcpr_0539 putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC D Arcpr_1365 putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC D Arcpr_0809 putative circadian clock protein, KaiC K08482 kaiC; circadian clock protein KaiC D Arcpr_0238 DNA-binding TFAR19-related protein K06875 PDCD5; programmed cell death protein 5 C 99992 Structural proteins D Arcpr_0640 hypothetical protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE C 99994 Others D Arcpr_0101 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Arcpr_1329 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D Arcpr_0296 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] B B 09194 Poorly characterized C 99996 General function prediction only D Arcpr_1451 PHP domain protein K04477 ycdX; putative hydrolase D Arcpr_1543 PilT protein domain protein K06865 K06865; ATPase D Arcpr_1414 ZPR1-related zinc finger protein K06874 K06874; zinc finger protein D Arcpr_1470 DEAD/DEAH box helicase domain protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein D Arcpr_1088 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein D Arcpr_0466 TatD-related deoxyribonuclease K07049 K07049; TatD-related deoxyribonuclease D Arcpr_0706 phosphoribosyltransferase K07100 K07100; putative phosphoribosyl transferase D Arcpr_1542 hypothetical protein K07143 K07143; UPF0148 protein D Arcpr_1422 protein of unknown function DUF112 transmembrane K08971 K08971; putative membrane protein D Arcpr_1119 Protein of unknown function DUF373 K08975 K08975; putative membrane protein D Arcpr_1281 membrane protein-like protein K08979 K08979; putative membrane protein C 99997 Function unknown D Arcpr_0470 protein of unknown function DUF75 K06869 K06869; uncharacterized protein D Arcpr_0258 serine protease-like protein K06870 K06870; uncharacterized protein D Arcpr_0285 DRTGG domain protein K06873 K06873; uncharacterized protein D Arcpr_0885 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein D Arcpr_0066 hypothetical protein K06889 K06889; uncharacterized protein D Arcpr_1193 hypothetical protein K06921 K06921; uncharacterized protein D Arcpr_1219 DUF234 DEXX-box ATPase K06921 K06921; uncharacterized protein D Arcpr_1184 ATPase K06921 K06921; uncharacterized protein D Arcpr_1162 hypothetical protein K06921 K06921; uncharacterized protein D Arcpr_1437 Radical SAM domain protein K06935 K06935; uncharacterized protein D Arcpr_0050 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Arcpr_0076 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Arcpr_1223 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Arcpr_1397 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Arcpr_0330 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Arcpr_1621 metal dependent phosphohydrolase K06950 K06950; uncharacterized protein D Arcpr_0280 phosphoesterase K06953 K06953; uncharacterized protein D Arcpr_1120 phosphoesterase K06953 K06953; uncharacterized protein D Arcpr_1074 photosystem I assembly BtpA K06971 K06971; uncharacterized protein D Arcpr_0462 efflux transporter, hydrophobe/amphiphile efflux-3 (HAE3) family K07003 K07003; uncharacterized protein D Arcpr_0886 beta-lactamase domain protein K07022 K07022; uncharacterized protein D Arcpr_0364 SufBD protein K07033 K07033; uncharacterized protein D Arcpr_0440 RNA-metabolising metallo-beta-lactamase K07041 K07041; uncharacterized protein D Arcpr_1200 PilT protein domain protein K07064 K07064; uncharacterized protein D Arcpr_0146 protein of unknown function DUF35 K07068 K07068; uncharacterized protein D Arcpr_1085 protein of unknown function DUF35 K07068 K07068; uncharacterized protein D Arcpr_1330 DNA polymerase beta domain protein region K07073 K07073; uncharacterized protein D Arcpr_1316 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein D Arcpr_0553 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Arcpr_0733 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Arcpr_1804 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Arcpr_1808 protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Arcpr_0366 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein D Arcpr_0734 metallophosphoesterase K07096 K07096; uncharacterized protein D Arcpr_1008 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Arcpr_1617 phosphoribosyltransferase K07101 K07101; uncharacterized protein D Arcpr_0372 amino acid-binding ACT domain protein K07103 K07103; uncharacterized protein D Arcpr_0334 ABC transporter related protein K07128 K07128; uncharacterized protein D Arcpr_0493 Radical SAM domain protein K07129 K07129; uncharacterized protein D Arcpr_0571 RNA-binding protein-like protein containing a C-terminal EMAP domain K07135 K07135; uncharacterized protein D Arcpr_0359 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K07137 K07137; uncharacterized protein D Arcpr_0328 PilT protein domain protein K07158 K07158; uncharacterized protein D Arcpr_0362 protein of unknown function DUF75 K07159 K07159; uncharacterized protein D Arcpr_0480 Zn-ribbon containing protein-like protein K07163 K07163; uncharacterized protein D Arcpr_1398 protein of unknown function DUF151 K08999 K08999; uncharacterized protein D Arcpr_1711 protein of unknown function DUF763 K09003 K09003; uncharacterized protein D Arcpr_0705 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein D Arcpr_0967 protein of unknown function UPF0182 K09118 K09118; uncharacterized protein D Arcpr_0598 protein of unknown function DUF99 K09120 K09120; uncharacterized protein D Arcpr_0338 protein of unknown function DUF82 K09122 K09122; uncharacterized protein D Arcpr_0644 Protein of unknown function DUF1867 K09126 K09126; uncharacterized protein D Arcpr_0292 protein of unknown function DUF167 K09131 K09131; uncharacterized protein D Arcpr_0587 protein of unknown function DUF401 K09133 K09133; uncharacterized protein D Arcpr_0471 Protein of unknown function DUF473 K09135 K09135; uncharacterized protein D Arcpr_1286 protein of unknown function DUF364 K09138 K09138; uncharacterized protein D Arcpr_0084 AMMECR1 domain protein K09141 K09141; uncharacterized protein D Arcpr_0329 Protein of unknown function DUF429 K09147 K09147; uncharacterized protein D Arcpr_0341 Protein of unknown function DUF424 K09148 K09148; uncharacterized protein D Arcpr_1247 Protein of unknown function DUF432 K09149 K09149; uncharacterized protein D Arcpr_0866 Protein of unknown function DUF460 K09150 K09150; uncharacterized protein D Arcpr_1415 Protein of unknown function DUF1621 K09152 K09152; uncharacterized protein D Arcpr_0367 protein of unknown function DUF447 K09154 K09154; uncharacterized protein D Arcpr_0207 conserved hypothetical protein K09707 K09707; uncharacterized protein D Arcpr_0208 conserved hypothetical protein K09707 K09707; uncharacterized protein D Arcpr_0446 Protein of unknown function UPF0146 K09713 K09713; uncharacterized protein D Arcpr_0226 Protein of unknown function DUF504 K09715 K09715; uncharacterized protein D Arcpr_0693 DNA polymerase beta domain protein region K09717 K09717; uncharacterized protein D Arcpr_1541 Protein of unknown function UPF0147 K09721 K09721; uncharacterized protein D Arcpr_1010 conserved hypothetical protein K09725 K09725; uncharacterized protein D Arcpr_0168 Protein of unknown function DUF357 K09728 K09728; uncharacterized protein D Arcpr_1107 Protein of unknown function UPF0179 K09730 K09730; uncharacterized protein D Arcpr_0939 Protein of unknown function DUF555 K09731 K09731; uncharacterized protein D Arcpr_0573 protein of unknown function DUF211 K09732 K09732; uncharacterized protein D Arcpr_0318 Protein of unknown function DUF61 K09737 K09737; uncharacterized protein D Arcpr_1255 Protein of unknown function DUF371 K09738 K09738; uncharacterized protein D Arcpr_0289 ApbE family lipoprotein K09740 K09740; uncharacterized protein D Arcpr_0481 conserved hypothetical protein K09743 K09743; uncharacterized protein D Arcpr_1772 protein of unknown function DUF790 K09744 K09744; uncharacterized protein D Arcpr_1651 conserved hypothetical protein K09746 K09746; uncharacterized protein D Arcpr_0771 protein of unknown function DUF343 K09791 K09791; uncharacterized protein D Arcpr_0844 hypothetical protein K09803 K09803; uncharacterized protein D Arcpr_1237 protein of unknown function DUF47 K07220 K07220; uncharacterized protein D Arcpr_1272 protein of unknown function DUF47 K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 27, 2024