+D Protein KO
#
Membrane Trafficking - Auxenochlorella protothecoides
%
!
AExocytosis
B Calcium ion-dependent exocytosis
C Synaptotagmins
C Septins
D F751_0312 Septin-7 K16944 SEPT7; septin 7
C DOC-2 proteins
C Acrosomal exocytosis proteins
D F751_4489 3-phosphoinositide-dependent protein kinase 1 K06276 PDPK1; 3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1]
C Phospholipases
C Kinases and associated proteins
D F751_1541 Phosphatidylinositol 4-phosphate 5-kinase 2 K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]
D F751_1494 Serine/threonine-protein kinase svkA K08838 STK24_25_MST4; serine/threonine-protein kinase 24/25/MST4 [EC:2.7.11.1]
D F751_1060 Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D F751_3486 Nucleoside diphosphate kinase 1 K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
C Others
B Small GTPases and associated proteins
C Rab GTPases
C Rab associated proteins
D F751_4272 hypothetical protein K18270 RAB3GAP1; Rab3 GTPase-activating protein catalytic subunit
D F751_0028 Calmodulin K02183 CALM; calmodulin
D F751_4731 Calmodulin K02183 CALM; calmodulin
D F751_6304 Protein transport Sec1a K15292 STXBP1; syntaxin-binding protein 1
D F751_5633 hypothetical protein K08518 STXBP5; syntaxin-binding protein 5
D F751_4517 Growth hormone-regulated TBC protein 1-A K19953 GRTP1; TBC1 domain family member 6
D F751_6427 Peroxisome biogenesis protein 5 K13342 PEX5; peroxin-5
D F751_2000 Geranylgeranyl transferase type-2 subunit alpha K14050 RABGGTA; geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
D F751_5928 Geranylgeranyl transferase type-2 subunit beta K05956 RABGGTB; geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
C Rho GTPases
C Other small GTPases and associated proteins
B Tethering complex
C Exocyst complex
D F751_4888 Exocyst complex component SEC3B K19983 EXOC1; exocyst complex component 1
D F751_5133 Exocyst complex component 3 K06110 EXOC3; exocyst complex component 3
D F751_1091 Exocyst complex component 5 K19984 EXOC5; exocyst complex component 5
C Exocyst complex assembly proteins
B Others
C Exomer complex
C Others
D F751_1624 Secretory carrier-associated membrane protein 1 K19995 SCAMP; secretory carrier-associated membrane protein
#
ASNARE
B Syntaxin (Qa)
C Stx-PM
D F751_1202 Putative syntaxin-131 K08486 STX1B_2_3; syntaxin 1B/2/3
C Stx-Endo
C Stx-TGN / EE
D F751_0587 Syntaxin-42 K08489 STX16; syntaxin 16
C Stx-cisGolgi
D F751_2046 Syntaxin-32 K08490 STX5; syntaxin 5
C Stx-sER
C Stx-rER
D F751_0583 Syntaxin-81 K08492 STX18; syntaxin 18
B SNAP-25[N] (Qb)
C Vti1
D F751_5952 Vesicle transport v-SNARE 13 K08493 VTI1; vesicle transport through interaction with t-SNAREs 1
C NPSN
D F751_3875 putative plant SNARE 12 K08494 NSPN; novel plant SNARE
C Gos1 (Gos28)
D F751_5538 Golgi SNAP receptor complex member 1-2 K08495 GOSR1; golgi SNAP receptor complex member 1
C Bos1 / Membrin
D F751_1035 Membrin-11 K08496 GOSR2; golgi SNAP receptor complex member 2
C Sec20
B SNAP-25[C] (Qc)
C STX6
D F751_2336 Syntaxin-61 K08500 SYP6; syntaxin of plants SYP6
C STX8
D F751_3639 Syntaxin-52 K08503 SYP5; syntaxin of plants SYP5
C STX10
C Bet1
C Sft1
C Syp7
D F751_2876 Syntaxin-71 K08506 SYP7; syntaxin of plants SYP7
C Use1
B SNAP-25 (Qb,c)
C SNAP-23
C SNAP-25
D F751_5409 Synaptosomal-associated protein 25 K18211 SNAP25; synaptosomal-associated protein 25
C SNAP-29
C SNAP-47
B VAMP, Ykt6, Sec22 (R)
C VAMP
D F751_3324 Putative vesicle-associated membrane protein 726 K08511 ATVAMP72; vesicle-associated membrane protein 72
D F751_2292 Vesicle-associated membrane protein 713 K08515 VAMP7; vesicle-associated membrane protein 7
C Ykt6
D F751_4060 VAMP-like protein YKT61 K08516 YKT6; synaptobrevin homolog YKT6
C Sec22
D F751_1051 25.3 kDa vesicle transport protein K08517 SEC22; vesicle transport protein SEC22
C Tomosyn
D F751_5633 hypothetical protein K08518 STXBP5; syntaxin-binding protein 5
C Putative SNAREs
B SNARE associated proteins
C Syntaxin-binding proteins
D F751_6304 Protein transport Sec1a K15292 STXBP1; syntaxin-binding protein 1
D F751_0849 SEC1 family transport protein SLY1 K19998 SCFD1; sec1 family domain-containing protein 1
C Palmitoyltransferases
D F751_5744 putative protein S-acyltransferase 14 K20028 ZDHHC2_15_20; palmitoyltransferase ZDHHC2/15/20 [EC:2.3.1.225]
D F751_4910 putative protein S-acyltransferase 17 K20003 ZDHHC4; palmitoyltransferase ZDHHC4 [EC:2.3.1.225]
D F751_0515 Protein S-acyltransferase 24 K20032 ZDHHC13_17; palmitoyltransferase ZDHHC13/17 [EC:2.3.1.225]
D F751_6679 putative protein S-acyltransferase 23 K20032 ZDHHC13_17; palmitoyltransferase ZDHHC13/17 [EC:2.3.1.225]
C Others
D F751_1293 Vesicle-fusing ATPase K06027 NSF; vesicle-fusing ATPase [EC:3.6.4.6]
D F751_1203 Alpha-soluble NSF attachment protein 2 K15296 NAPA; alpha-soluble NSF attachment protein
D F751_1939 Gamma-soluble NSF attachment protein K21198 NAPG; gamma-soluble NSF attachment protein
D F751_6914 UBA and UBX domain-containing protein K14012 NSFL1C; UBX domain-containing protein 1
#
AEndocytosis
B Clathrin-mediated endocytosis
C Clathrin
D F751_2974 Clathrin heavy chain 1 K04646 CLTC; clathrin heavy chain
C Dynamin
D F751_5684 Dynamin-1-like protein K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
C AP-2 complex
D F751_2983 AP-2 complex subunit alpha-1 K11824 AP2A; AP-2 complex subunit alpha
D F751_3673 AP-2 complex subunit mu K11826 AP2M1; AP-2 complex subunit mu-1
D F751_3947 AP-2 complex subunit sigma K11827 AP2S1; AP-2 complex subunit sigma-1
C Other core components
D F751_3972 Clathrin interactor EPSIN 3 K12471 EPN; epsin
D F751_3047 Stromal 70 kDa heat shock-related protein, chloroplastic K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D F751_2616 Heat shock cognate 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
C Low-density lipoprotein receptor (LDLR) family proteins
C LDLR adaptor proteins
D F751_1541 Phosphatidylinositol 4-phosphate 5-kinase 2 K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]
C GPCR adaptor proteins
C Receptor tyrosine kinase (RTK) adaptor proteins
C Inositol 5-phosphatases
C Kinases
D F751_4979 SCY1-like protein 2 K17541 SCYL2; SCY1-like protein 2
C Ubiquitin E3 ligases
C Others
D F751_5645 Calnexin-like protein 1 K08054 CANX; calnexin
D F751_5968 hypothetical protein K20069 NECAP1_2; adaptin ear-binding coat-associated protein 1/2
D F751_4591 Adaptin ear-binding coat-associated protein 2 K20069 NECAP1_2; adaptin ear-binding coat-associated protein 1/2
D F751_4127 Ankyrin repeat domain-containing protein 13C K21437 ANKRD13; ankyrin repeat domain-containing protein 13
D F751_3295 hypothetical protein K22936 CNPY1_2; protein canopy 1/2
B Lipid raft mediated endocytosis
C Caveolin-mediated endocytosis
D F751_5684 Dynamin-1-like protein K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
C Flotillin-dependent endocytosis
C GRAF1-dependent endocytosis
D F751_4949 ADP-ribosylation factor 1 K07937 ARF1_2; ADP-ribosylation factor 1/2
C Arf6-dependent endocytosis
C RhoA-dependent endocytosis
D F751_5684 Dynamin-1-like protein K17065 DNM1L; dynamin 1-like protein [EC:3.6.5.5]
B Phagocytosis
C Fc receptors
C Integrins (complement receptors)
C Opsonins
C Toll-like receptors
C C-lectin receptors
C Scavenger receptors
D F751_0506 Scavenger receptor class B member 1 K13885 SCARB1; scavenger receptor class B, member 1
C Coronins
C Others
B Macropinocytosis
C Ras GTPases
C Kinases
D F751_4646 Phosphatidylinositol 3-kinase, root isoform K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
C Phospholipase C
C Sorting nexins
D F751_5339 Vacuolar protein sorting-associated protein vps5 K17917 SNX1_2; sorting nexin-1/2
C Others
B Bin/Amphiphysin/Rvs (BAR) family proteins
C N-BAR proteins
C F-BAR proteins
C I-BAR proteins
B Rab GTPases and associated proteins
C Rab GTPases
C Rab associated proteins
D F751_1059 Vacuolar protein sorting-associated protein 9A K20131 RABGEF1; Rab5 GDP/GTP exchange factor
D F751_4646 Phosphatidylinositol 3-kinase, root isoform K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D F751_2108 putative serine/threonine-protein kinase vps15 K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
D F751_3184 Vacuolar protein sorting-associated protein 45-like protein K12479 VPS45; vacuolar protein sorting-associated protein 45
B Arf GTPases and associated proteins
C Arf GTPases
D F751_4949 ADP-ribosylation factor 1 K07937 ARF1_2; ADP-ribosylation factor 1/2
C Arf associated proteins
D F751_6650 putative ADP-ribosylation factor GTPase-activating protein AGD5 K12486 SMAP; stromal membrane-associated protein
D F751_4695 putative ADP-ribosylation factor GTPase-activating protein AGD5 K12486 SMAP; stromal membrane-associated protein
B Others
C Fucosyltransferase
C EFR3-PI4KIII alpha complex and associated proteins
D F751_3482 hypothetical protein K21842 EFR3; protein EFR3
C Insulin-like growth factor-binding proteins
C Others
#
AEndosome - Lysosome transport
B Rab GTPases and associated proteins
C Rab GTPases
D F751_6593 Ras-related protein Rab7 K07897 RAB7A; Ras-related protein Rab-7A
C Retromer subcomplex
D F751_3132 Vacuolar protein sorting-associated protein 35 K18468 VPS35; vacuolar protein sorting-associated protein 35
D F751_6345 Vacuolar protein sorting-associated protein 29 K18467 VPS29; vacuolar protein sorting-associated protein 29
D F751_0321 Vacuolar protein sorting-associated protein 26B K18466 VPS26A_B; vacuolar protein sorting-associated protein 26A/B
C FTS/Hook/FHIP (FHF) complex
C Rab associated proteins
D F751_4646 Phosphatidylinositol 3-kinase, root isoform K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D F751_2115 Proteasome subunit alpha type-7 K02731 PSMA7; 20S proteasome subunit alpha 4 [EC:3.4.25.1]
D F751_2000 Geranylgeranyl transferase type-2 subunit alpha K14050 RABGGTA; geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
D F751_5928 Geranylgeranyl transferase type-2 subunit beta K05956 RABGGTB; geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
B Arf GTPases and associated proteins
C Arf GTPases
D F751_5844 ADP-ribosylation factor-like protein 8 K07955 ARL8; ADP-ribosylation factor-like protein 8
C BLOC-one-related complex (BORC)
D F751_0341 hypothetical protein K20822 MEF2BNB; BLOC-1 related complex subunit 8
C N-acetyl transferase complex C (NatC)
D F751_5973 N-alpha-acetyltransferase 30 K00670 NAA30; N-alpha-acetyltransferase 30 [EC:2.3.1.256]
D F751_1745 N-alpha-acetyltransferase, 35 NatC auxiliary subunit-like protein K20823 NAA35; N-alpha-acetyltransferase 35, NatC auxiliary subunit
C Other Arf associated proteins
B Endosomal sorting complexes required for transport (ESCRT)
C ESCRT-0 complex
C ESCRT-I complex
D F751_2915 Vacuolar protein sorting-associated protein 28-like protein 2 K12184 VPS28; ESCRT-I complex subunit VPS28
C ESCRT-II complex
D F751_1197 Vacuolar protein sorting-associated protein 22-like protein 1 K12188 SNF8; ESCRT-II complex subunit VPS22
D F751_0549 Vacuolar protein sorting-associated protein 25 K12189 VPS25; ESCRT-II complex subunit VPS25
D F751_6195 Vacuolar protein sorting-associated protein 36 K12190 VPS36; ESCRT-II complex subunit VPS36
C ESCRT-III complex
D F751_5537 Charged multivesicular body protein 1 K12197 CHMP1; charged multivesicular body protein 1
D F751_4703 Vacuolar protein sorting-associated protein 2-like protein 1 K12191 CHMP2A; charged multivesicular body protein 2A
D F751_2224 Vacuolar protein sorting-associated protein 2-like protein 3 K12192 CHMP2B; charged multivesicular body protein 2B
D F751_1350 Vacuolar protein sorting-associated protein 24-like protein 1 K12193 VPS24; charged multivesicular body protein 3
D F751_4434 Vacuolar protein sorting-associated protein 32-like protein 1 K12194 CHMP4A_B; charged multivesicular body protein 4A/B
D F751_6280 Charged multivesicular body protein 5 K12198 CHMP5; charged multivesicular body protein 5
D F751_4581 Vacuolar protein sorting-associated protein 20-like protein 1 K12195 CHMP6; charged multivesicular body protein 6
D F751_4119 Vacuolar protein sorting-associated protein 4 K12196 VPS4; vacuolar protein-sorting-associated protein 4
C ESCRT associated proteins
D F751_5551 Vacuolar protein sorting-associated protein VTA1-like protein K12199 VTA1; vacuolar protein sorting-associated protein VTA1
D F751_4911 ALG-2 interacting protein X K12200 PDCD6IP; programmed cell death 6-interacting protein
B Tethering complex
C CORVET complex
D F751_6592 hypothetical protein K20177 VPS3; vacuolar protein sorting-associated protein 3
D F751_3508 Vacuolar protein sorting-associated protein 8-like protein K20178 VPS8; vacuolar protein sorting-associated protein 8
D F751_0114 Vacuolar protein sorting-associated protein 11-like protein K20179 VPS11; vacuolar protein sorting-associated protein 11
D F751_2398 Vacuolar protein sorting-associated protein 16-like protein K20180 VPS16; vacuolar protein sorting-associated protein 16
D F751_6635 Vacuolar protein sorting-associated protein 18-like protein K20181 VPS18; vacuolar protein sorting-associated protein 18
D F751_5204 Vacuolar protein sorting-associated protein 33-like protein K20182 VPS33A; vacuolar protein sorting-associated protein 33A
C Hops complex
D F751_0114 Vacuolar protein sorting-associated protein 11-like protein K20179 VPS11; vacuolar protein sorting-associated protein 11
D F751_2398 Vacuolar protein sorting-associated protein 16-like protein K20180 VPS16; vacuolar protein sorting-associated protein 16
D F751_6635 Vacuolar protein sorting-associated protein 18-like protein K20181 VPS18; vacuolar protein sorting-associated protein 18
D F751_5204 Vacuolar protein sorting-associated protein 33-like protein K20182 VPS33A; vacuolar protein sorting-associated protein 33A
D F751_6906 Vam6/Vps39-like protein K20183 VPS39; Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
D F751_6737 Vacuolar protein sorting-associated protein 41-like protein K20184 VPS41; vacuolar protein sorting-associated protein 41
B Acidification regulators
C Rabconnectin-3 complex
C RAVE complex
B Others
C AP-3 complex
C BLOC-1 complex
C BLOC-1 complex (yeast)
C BLOC-2 complex
C BLOC-3 complex
C Ferlins
C Others
D F751_4177 Vacuolar fusion protein MON1-like protein B K20195 MON1; vacuolar fusion protein MON1
D F751_0100 hypothetical protein K24763 RMC1; regulator of MON1-CCZ1 complex
D F751_1062 AMSH-like ubiquitin thioesterase 1 K11866 STAMBP; STAM-binding protein [EC:3.4.19.12]
#
AProtein recycling
B Rab GTPases and associated proteins
C Rab GTPases
C Rab4 associated proteins
C Rab11 associated proteins
D F751_1459 SEC13-like protein K14004 SEC13; protein transport protein SEC13
D F751_3756 LisH domain and HEAT repeat-containing protein KIAA1468-like protein K26154 RELCH; RAB11-binding protein RELCH
C Other Rab GTPase associated proteins
D F751_1659 EH domain-containing protein 1 K12483 EHD1; EH domain-containing protein 1
D F751_5273 TBC1 domain family member 13 K24796 TBC1D13; TBC1 domain family member 13
D F751_1059 Vacuolar protein sorting-associated protein 9A K20131 RABGEF1; Rab5 GDP/GTP exchange factor
D F751_3459 DNA repair protein RAD51-like protein K04482 RAD51; DNA repair protein RAD51
B Others
C Glutamate receptor-interacting proteins (GRIPs)
C GRIP associated proteins
C EARP complex
D F751_2648 Vacuolar protein sorting-associated protein 51-like protein K20296 ANG2; vacuolar protein sorting-associated protein 51
D F751_6081 Vacuolar protein sorting-associated protein 52-like protein K20298 VPS52; vacuolar protein sorting-associated protein 52
D F751_2281 Vacuolar protein sorting-associated protein 53-like protein K20299 VPS53; vacuolar protein sorting-associated protein 53
D F751_5756 Coiled-coil domain-containing protein 132 K23288 VPS50; syndetin
D F751_5755 Coiled-coil domain-containing protein 132 K23288 VPS50; syndetin
C WASH complex
C Retriever complex
D F751_6345 Vacuolar protein sorting-associated protein 29 K18467 VPS29; vacuolar protein sorting-associated protein 29
C Others
#
AEndosome - Golgi transport
B Rab GTPases and associated proteins
C Rab GTPases
D F751_5440 Ras-related protein RABH1e K07893 RAB6A; Ras-related protein Rab-6A
C Rab associated proteins
D F751_2542 Golgin candidate 5 K20286 TMF1; TATA element modulatory factor
D F751_0512 Dynein light chain roadblock-type 2 K10419 DYNLRB; dynein light chain roadblock-type
D F751_1610 Vacuolar protein sorting-associated protein 13A K19525 VPS13A_C; vacuolar protein sorting-associated protein 13A/C
B Arf GTPases and associated proteins
C Arf GTPases
D F751_4949 ADP-ribosylation factor 1 K07937 ARF1_2; ADP-ribosylation factor 1/2
D F751_6559 ADP-ribosylation factor 1 K07942 ARL1; ADP-ribosylation factor-like protein 1
D F751_5362 ADP-ribosylation factor-related protein 1 K07952 ARFRP1; ADP-ribosylation factor related protein 1
C Arf GTPase associated proteins
D F751_3805 ADP-ribosylation factor GTPase-activating protein AGD7 K12492 ARFGAP1; ADP-ribosylation factor GTPase-activating protein 1
D F751_3291 putative ADP-ribosylation factor GTPase-activating protein AGD9 K12493 ARFGAP2_3; ADP-ribosylation factor GTPase-activating protein 2/3
D F751_6650 putative ADP-ribosylation factor GTPase-activating protein AGD5 K12486 SMAP; stromal membrane-associated protein
D F751_4695 putative ADP-ribosylation factor GTPase-activating protein AGD5 K12486 SMAP; stromal membrane-associated protein
D F751_2921 Brefeldin A-inhibited guanine nucleotide-exchange protein 2 K18442 ARFGEF; brefeldin A-inhibited guanine nucleotide-exchange protein
D F751_6928 ARF guanine-nucleotide exchange factor GNOM K18443 GBF1; golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
B Tethering complex
C Conserved oligomeric Golgi (COG) complex
D F751_5012 Conserved oligomeric Golgi complex subunit 1 K20288 COG1; conserved oligomeric Golgi complex subunit 1
D F751_4298 Conserved oligomeric Golgi complex subunit 2 K20289 COG2; conserved oligomeric Golgi complex subunit 2
D F751_3932 Conserved oligomeric Golgi complex subunit 3 K20290 COG3; conserved oligomeric Golgi complex subunit 3
D F751_1408 Conserved oligomeric Golgi complex subunit 4 K20291 COG4; conserved oligomeric Golgi complex subunit 4
D F751_6997 Conserved oligomeric Golgi complex subunit 5 K20292 COG5; conserved oligomeric Golgi complex subunit 5
D F751_6324 Conserved oligomeric Golgi complex subunit 6 K20293 COG6; conserved oligomeric Golgi complex subunit 6
D F751_6277 Conserved oligomeric Golgi complex subunit 7 K20294 COG7; conserved oligomeric Golgi complex subunit 7
D F751_4683 Conserved oligomeric Golgi complex subunit 8 K20295 COG8; conserved oligomeric Golgi complex subunit 8
C GARP complex
D F751_2648 Vacuolar protein sorting-associated protein 51-like protein K20296 ANG2; vacuolar protein sorting-associated protein 51
D F751_6081 Vacuolar protein sorting-associated protein 52-like protein K20298 VPS52; vacuolar protein sorting-associated protein 52
D F751_2281 Vacuolar protein sorting-associated protein 53-like protein K20299 VPS53; vacuolar protein sorting-associated protein 53
C TRAPP complex II
D F751_1722 Trafficking protein particle complex subunit 1 K20300 TRAPPC1; trafficking protein particle complex subunit 1
D F751_1474 Trafficking protein particle complex subunit 2-like protein K20301 TRAPPC2; trafficking protein particle complex subunit 2
D F751_2380 Trafficking protein particle complex subunit 2 K20301 TRAPPC2; trafficking protein particle complex subunit 2
D F751_5441 Trafficking protein particle complex subunit 3 K20302 TRAPPC3; trafficking protein particle complex subunit 3
D F751_4780 Trafficking protein particle complex subunit 4 K20303 TRAPPC4; trafficking protein particle complex subunit 4
D F751_4138 Trafficking protein particle complex subunit 5 K20280 TRAPPC5; trafficking protein particle complex subunit 5
D F751_5180 Trafficking protein particle complex subunit 6B K20304 TRAPPC6; trafficking protein particle complex subunit 6
D F751_1992 Trafficking protein particle complex subunit 8 K20305 TRAPPC8; trafficking protein particle complex subunit 8
D F751_2072 Trafficking protein particle complex subunit 9 K20306 TRAPPC9; trafficking protein particle complex subunit 9
D F751_2342 Trafficking protein particle complex subunit 10 K20307 TRAPPC10; trafficking protein particle complex subunit 10
D F751_4001 hypothetical protein K20308 TRAPPC11; trafficking protein particle complex subunit 11
B Others
C AP-1 complex
D F751_6320 AP-1 complex subunit gamma-2 K12391 AP1G1; AP-1 complex subunit gamma-1
D F751_3764 Beta-adaptin-like protein C K12392 AP1B1; AP-1 complex subunit beta-1
D F751_1974 AP-1 complex subunit mu-1-I K12393 AP1M; AP-1 complex subunit mu
D F751_2161 AP-1 complex subunit sigma-1 K12394 AP1S1_2; AP-1 complex subunit sigma 1/2
C AP-3 complex
C AP-4 complex
D F751_2914 AP-4 complex subunit epsilon K12400 AP4E1; AP-4 complex subunit epsilon-1
D F751_3742 AP-2 complex subunit mu K12402 AP4M1; AP-4 complex subunit mu-1
D F751_2039 AP-4 complex subunit sigma K12403 AP4S1; AP-4 complex subunit sigma-1
C GGA
C Aftiphilin/p200/gamma-synergin complex
C Others
D F751_1541 Phosphatidylinositol 4-phosphate 5-kinase 2 K00889 PIP5K; 1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]
D F751_0547 SYS1-like protein K20318 SYS1; protein SYS1
D F751_6175 GDT1-like protein 5 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D F751_3746 putative serine incorporator K23544 SERINC1; serine incorporator 1
D F751_6144 MON2-like protein K26678 MON2; protein MON2
D F751_4452 Golgi apparatus membrane protein-like protein ECHIDNA K26752 TVP23; golgi apparatus membrane protein TVP23
#
AEndoplasmic reticulum (ER) - Golgi transport
B Forward pathways
C Coat protein complex II (COP-II)
D F751_1459 SEC13-like protein K14004 SEC13; protein transport protein SEC13
D F751_6771 Protein transport protein SEC31 K14005 SEC31; protein transport protein SEC31
D F751_5708 Protein transport protein SEC23 K14006 SEC23; protein transport protein SEC23
D F751_0368 Protein transport protein Sec24-like CEF K14007 SEC24; protein transport protein SEC24
D F751_5027 Protein transport protein Sec24-like K14007 SEC24; protein transport protein SEC24
D F751_6191 SEC12-like protein 2 K14003 PREB; prolactin regulatory element-binding protein
C TRAPP complex I
D F751_1722 Trafficking protein particle complex subunit 1 K20300 TRAPPC1; trafficking protein particle complex subunit 1
D F751_1474 Trafficking protein particle complex subunit 2-like protein K20301 TRAPPC2; trafficking protein particle complex subunit 2
D F751_2380 Trafficking protein particle complex subunit 2 K20301 TRAPPC2; trafficking protein particle complex subunit 2
D F751_5441 Trafficking protein particle complex subunit 3 K20302 TRAPPC3; trafficking protein particle complex subunit 3
D F751_4780 Trafficking protein particle complex subunit 4 K20303 TRAPPC4; trafficking protein particle complex subunit 4
D F751_4138 Trafficking protein particle complex subunit 5 K20280 TRAPPC5; trafficking protein particle complex subunit 5
D F751_5180 Trafficking protein particle complex subunit 6B K20304 TRAPPC6; trafficking protein particle complex subunit 6
C p24 family proteins
D F751_6629 hypothetical protein K20347 TMED2; p24 family protein beta-1
D F751_2654 Transmembrane protein Tmp21 K20352 TMED10; p24 family protein delta-1
C PDI family proteins
D F751_3271 Protein disulfide isomerase-like 1-4 K09580 PDIA1; protein disulfide-isomerase A1 [EC:5.3.4.1]
C Rab GTPases
D F751_0367 GTP-binding protein YPTC1 K07874 RAB1A; Ras-related protein Rab-1A
D F751_1083 GTP-binding protein YPTC4 K07877 RAB2A; Ras-related protein Rab-2A
C Rab associated proteins
D F751_3066 PRA1 family protein B2 K20359 RABAC1; PRA1 family protein 1
D F751_1265 TBC1 domain family member 20 K20372 TBC1D20; TBC1 domain family member 20
D F751_0050 GTPase-activating protein gyp1 K20360 TBC1D22; TBC1 domain family member 2
D F751_0851 Protein transport protein yif1 K20362 YIF1; protein transport protein YIF1
D F751_5271 Immediate early response 3-interacting protein 1 K22939 IER3IP1; immediate early response 3-interacting protein 1
C ER-Golgi intermediate compartment (ERGIC) proteins
D F751_5574 Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1 K01230 MAN1A_C; mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113]
D F751_6268 Endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase K23741 MAN1B; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase [EC:3.2.1.209]
D F751_1449 putative endoplasmic reticulum-Golgi intermediate compartment protein 3 K20367 ERGIC3; endoplasmic reticulum-Golgi intermediate compartment protein 3
D F751_1429 Endoplasmic reticulum-Golgi intermediate compartment protein 3 K20367 ERGIC3; endoplasmic reticulum-Golgi intermediate compartment protein 3
D F751_5424 ER-derived vesicles protein ERV14 K20368 CNIH; protein cornichon
D F751_3275 Luminal-binding protein 5 K09490 HSPA5; endoplasmic reticulum chaperone BiP [EC:3.6.4.10]
B Retrieval pathways
C Coat protein complex I (COP-I)
D F751_3995 Coatomer subunit alpha-2 K05236 COPA; coatomer subunit alpha
D F751_5344 Coatomer subunit beta-1 K17301 COPB1; coatomer subunit beta
D F751_6842 Coatomer subunit beta'-1 K17302 COPB2; coatomer subunit beta'
D F751_2277 Coatomer subunit gamma K17267 COPG; coatomer subunit gamma
D F751_6065 Coatomer subunit delta-1 K20471 COPD; coatomer subunit delta
D F751_0533 Coatomer subunit epsilon-2 K17268 COPE; coatomer subunit epsilon
D F751_4167 Coatomer subunit zeta-3 K20472 COPZ; coatomer subunit zeta
C NRZ (DSL1) complex
D F751_2314 RINT1-like protein K20474 RINT1; RAD50-interacting protein 1
C Golgi to ER traffic proteins (GET)
D F751_0941 ATPase GET3 K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D F751_3830 Putative arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D F751_6217 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Rab GTPases
D F751_5440 Ras-related protein RABH1e K07893 RAB6A; Ras-related protein Rab-6A
C Rab associated proteins
D F751_1179 RIC1-like protein K20476 RIC1; RAB6A-GEF complex partner protein 1
D F751_7007 ER lumen protein retaining receptor K10949 KDELR; ER lumen protein retaining receptor
D F751_0050 GTPase-activating protein gyp1 K20360 TBC1D22; TBC1 domain family member 2
B Others
C Oxysterol-binding proteins
D F751_3383 Oxysterol-binding protein-related protein 1C K20456 OSBP; oxysterol-binding protein 1
C FXYD proteins
C YIPF proteins
D F751_6259 YIPF1-like protein K22940 YIPF1_2; protein YIPF1/2
D F751_2472 Protein YIPF5 K20363 YIPF5_7; protein YIPF5/7
D F751_1436 Protein YIPF6 K22943 YIPF6; protein YIPF6
C ER membrane protein complex
D F751_4680 ER membrane protein complex subunit 1 K23562 EMC1; ER membrane protein complex subunit 1
D F751_2020 ER membrane protein complex subunit 2 K23563 EMC2; ER membrane protein complex subunit 2
D F751_4314 ER membrane protein complex subunit 3 K23564 EMC3; ER membrane protein complex subunit 3
D F751_6511 ER membrane protein complex subunit 4 K23565 EMC4; ER membrane protein complex subunit 4
D F751_4073 hypothetical protein K23566 MMGT1; membrane magnesium transporter 1
D F751_6061 hypothetical protein K23567 EMC6; ER membrane protein complex subunit 6
D F751_4085 ER membrane protein complex subunit 7-like protein K23568 EMC7; ER membrane protein complex subunit 7
D F751_4325 ER membrane protein complex subunit 8/9-like protein K23569 EMC8_9; ER membrane protein complex subunit 8/9
C SEC61 complex
D F751_1501 Protein transport protein Sec61 subunit gamma-1 K07342 SEC61G; protein transport protein SEC61 subunit gamma and related proteins
C TRAP complex
D F751_3829 hypothetical protein K13249 SSR1; translocon-associated protein subunit alpha
D F751_6572 Translocon-associated protein subunit beta K13250 SSR2; translocon-associated protein subunit beta
C Multi-pass translocon (MPT) complex
D F751_0485 Transmembrane and coiled-coil domain-containing protein 1-like protein K21891 TMCO1; calcium load-activated calcium channel
C Post-GPI attachment to proteins factors (PGAP)
D F751_4499 Post-GPI attachment to proteins factor 3 K23553 PGAP3; post-GPI attachment to proteins factor 3
C Others
D F751_0849 SEC1 family transport protein SLY1 K19998 SCFD1; sec1 family domain-containing protein 1
D F751_2805 Beta-glucan synthesis-associated protein SKN1 K21850 KRE6; beta-glucan synthesis-associated protein KRE6
D F751_6454 Piezo-type mechanosensitive ion channel component 2 K22128 PIEZO1_2; piezo-type mechanosensitive ion channel component 1/2
D F751_0064 Spastin K13254 SPAST; spastin [EC:5.6.1.1]
D F751_0714 Dymeclin K23951 DYM; dymeclin
D F751_0644 Vesicle transport protein GOT1B K26683 GOLT1; vesicle transport protein GOT1
D F751_2640 Protein ROOT HAIR DEFECTIVE 3 K22698 SEY1; protein SEY1 [EC:3.6.5.-]
#
AAutophagy
B Autophagosome formation proteins
C ULK complex
D F751_0423 Meiotically up-regulatedprotein66 protein K19730 ATG101; autophagy-related protein 101
C Atg1 complex
D F751_0977 Serine/threonine-protein kinase ATG1 K08269 ULK2; serine/threonine-protein kinase ULK2 [EC:2.7.11.1]
C PI3K complex
D F751_4646 Phosphatidylinositol 3-kinase, root isoform K00914 PIK3C3; phosphatidylinositol 3-kinase [EC:2.7.1.137]
D F751_2108 putative serine/threonine-protein kinase vps15 K08333 PIK3R4; phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]
D F751_1100 Beclin-1-like protein K08334 BECN; beclin
C ATG9 transmembrane protein
D F751_4149 Autophagy-related protein 9 K17907 ATG9; autophagy-related protein 9
C Atg18-Atg2 complex
D F751_3626 Autophagy-related protein 18 K17908 WIPI1_2; autophagy-related protein 18
C Atg12 conjugation proteins
D F751_3322 Ubiquitin-like protein ATG12A K08336 ATG12; ubiquitin-like protein ATG12
D F751_0604 Ubiquitin-like modifier-activating enzyme ATG7 K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7
D F751_1437 Ubiquitin-like-conjugating enzyme ATG10 K17888 ATG10L; ubiquitin-like-conjugating enzyme ATG10
D F751_4514 Protein tipD K17890 ATG16L1; autophagy-related protein 16-1
C Atg8 conjugation proteins
D F751_5121 Autophagy-related protein 8d K08341 GABARAP; GABA(A) receptor-associated protein
D F751_3434 Cysteine protease ATG4a K08342 ATG4; cysteine protease ATG4 [EC:3.4.22.-]
D F751_0604 Ubiquitin-like modifier-activating enzyme ATG7 K08337 ATG7; ubiquitin-like modifier-activating enzyme ATG7
D F751_6644 Autophagy-related protein 3 K08343 ATG3; ubiquitin-like-conjugating enzyme ATG3
B Cytoplasm to vacuolar targeting (CVT) pathway
C Selective cargos
D F751_2582 Lysosomal alpha-mannosidase K01191 MAN2C1; alpha-mannosidase [EC:3.2.1.24]
D F751_6911 Aspartyl aminopeptidase K01267 DNPEP; aspartyl aminopeptidase [EC:3.4.11.21]
C Cargo receptors
C Scaffold protein
C Other Cvt associated proteins
B Mitophagy
C Cargo receptors
C Scaffold proteins
C PINK1-Parkin associated proteins
D F751_3463 Protein CLEC16A K19513 CLEC16A; protein CLEC16A
C Other mitophagy associated proteins
D F751_3201 Hexokinase-5 K00844 HK; hexokinase [EC:2.7.1.1]
D F751_3960 Ubiquitin carboxyl-terminal hydrolase 30 K11851 USP30; ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]
B Pexophagy
C Selective cargos
D F751_2368 Peroxisome biogenesis protein 3-1 K13336 PEX3; peroxin-3
D F751_0427 Peroxisomal membrane protein PEX14 K13343 PEX14; peroxin-14
C Cargo receptors
C Other pexophagy associated proteins
D F751_1406 Peroxisome biogenesis protein 1 K13338 PEX1; peroxin-1
D F751_2661 Peroxisome biogenesis protein 6 K13339 PEX6; peroxin-6
B Aggrephagy
C Cargo receptors
C Scaffold proteins
C Other aggrephagy associated proteins
B Xenophagy
C Cargo receptors
C Other xenophagy associated proteins
B Chaperone mediated autophagy (CMA)
C Selective cargos
D F751_5518 putative fructose-bisphosphate aldolase 3, chloroplastic K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D F751_6011 Fructose-bisphosphate aldolase, cytoplasmic isozyme 2 K01623 ALDO; fructose-bisphosphate aldolase, class I [EC:4.1.2.13]
D F751_0301 Aspartate aminotransferase 1 K14454 GOT1; aspartate aminotransferase, cytoplasmic [EC:2.6.1.1]
D F751_3351 Glyceraldehyde-3-phosphate dehydrogenase, cytosolic K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D F751_0751 Pyruvate kinase, cytosolic isozyme K00873 PK; pyruvate kinase [EC:2.7.1.40]
D F751_3558 Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D F751_4165 Pyruvate kinase, cytosolic isozyme K00873 PK; pyruvate kinase [EC:2.7.1.40]
D F751_1291 Pyruvate kinase isozyme A, chloroplastic K00873 PK; pyruvate kinase [EC:2.7.1.40]
D F751_1646 Pyruvate kinase isozyme G, chloroplastic K00873 PK; pyruvate kinase [EC:2.7.1.40]
D F751_3657 Ubiquilin-1 K04523 UBQLN; ubiquilin
C Cargo receptors
C Chaperones
D F751_3047 Stromal 70 kDa heat shock-related protein, chloroplastic K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D F751_2616 Heat shock cognate 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8
D F751_2447 Heat shock protein 90-2 K04079 HSP90A; molecular chaperone HtpG
C Co-chaperones
C Other CMA associated proteins
D F751_6279 Elongation factor 1-alpha K03231 EEF1A; elongation factor 1-alpha
B Other autophagy associated proteins
C RNautophagy/DNautophagy
C Micronucleophagy
C Midbophagy
C Glycophagy
C TRIM-directed selective autophagy
C ER-mitochondria tethering complex
C mTORC1 complex
D F751_1983 Serine/threonine-protein kinase TOR K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
D F751_1139 LST8-like protein K08266 MLST8; target of rapamycin complex subunit LST8
D F751_5412 Regulatory-associated protein of TOR 1 K07204 RAPTOR; regulatory associated protein of mTOR
C mTORC2 complex
D F751_1983 Serine/threonine-protein kinase TOR K07203 MTOR; serine/threonine-protein kinase mTOR [EC:2.7.11.1]
D F751_1139 LST8-like protein K08266 MLST8; target of rapamycin complex subunit LST8
C SEACIT/GATOR1 complex
C SEACAT/GATOR2 complex
D F751_1459 SEC13-like protein K14004 SEC13; protein transport protein SEC13
C KICSTOR complex
C Rab GTPases
D F751_0367 GTP-binding protein YPTC1 K07874 RAB1A; Ras-related protein Rab-1A
C Rab associated proteins
C Others
D F751_0394 SNF1-related protein kinase catalytic subunit alpha KIN10 K07198 PRKAA; 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.31]
D F751_0347 Serine/threonine-protein phosphatase PP2A-2 catalytic subunit K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
D F751_6418 Immunoglobulin-binding protein 1 K17606 IGBP1; immunoglobulin-binding protein 1
D F751_3138 hypothetical protein K21249 UVRAG; UV radiation resistance-associated gene protein
#
AOthers
B NADPH oxidases (Nox) and associated proteins
C NADPH oxidases
C Nox associated proteins
B Actin-binding proteins
C Myosins
D F751_5894 Unconventional myosin-Va K10357 MYO5; myosin V
D F751_2526 Myosin-J heavy chain K10357 MYO5; myosin V
D F751_4999 Myosin-2 heavy chain K10357 MYO5; myosin V
C Arp2/3 complex
D F751_2695 Actin-related protein 2/3 complex subunit 1B K05757 ARPC1A_B; actin related protein 2/3 complex, subunit 1A/1B
D F751_3494 Actin-related protein 2/3 complex subunit 4 K05755 ARPC4; actin related protein 2/3 complex, subunit 4
D F751_5002 Actin-related protein 2 K17260 ACTR2; actin-related protein 2
D F751_3076 Actin-related protein 3 K18584 ACTR3; actin-related protein 3
C Nucleation-promoting factors (NPFs)
D F751_2175 hypothetical protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
D F751_2177 hypothetical protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
D F751_6430 hypothetical protein K20523 SH3YL1; SH3 domain-containing YSC84-like protein 1
C Others
D F751_0324 Profilin K05759 PFN; profilin
D F751_4475 Actophorin K05765 CFL; cofilin
D F751_3903 Adenylyl cyclase-associated protein 1 K17261 CAP1_2; adenylyl cyclase-associated protein
B Mucins
C Membrane bound mucins
C Secretory mucins
B Rab GTPases of specific organelles
C Melanosome
C Auto phagosome
D F751_4514 Protein tipD K17890 ATG16L1; autophagy-related protein 16-1
C Lipid droplets
D F751_0661 GTP-binding protein yptV3 K07910 RAB18; Ras-related protein Rab-18
C Mitochondrion
B Rho GTPase associated proteins
C Rho GTPase-activating proteins
C Rho guanine nucleotide exchange factors (GEFs)
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 10, 2024