+E Transcription factors KO
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Transcription Factors - Brucella ceti TE28753-12
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AEukaryotic type
B Basic leucine zipper (bZIP)
C AP-1(-like) components, Jun
C AP-1(-like) components, Fos
C AP-1(-like) components, Maf
C AP-1(-like) components, NF-E2
C AP-1(-like) components, Fungal regulators
C AP-1(-like) components, CRE-BP/ATF
C CREB
C C/EBP-like factors
C bZIP/PAR
C Plant bZIP factors
C ZIP only
B Basic helix-loop-helix (bHLH)
C Ubiquitous (class A) factors
C Myogenic transcription factors
C Achaete-Scute
C Tal/Twist/Atonal/Hen, Lymphoid factors
C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors
C Tal/Twist/Atonal/Hen, HEN
C Tal/Twist/Atonal/Hen, Mesp
C Tal/Twist/Atonal/Hen, Atonal
C Tal/Twist/Atonal/Hen, Pancreatic factors
C Hairy, Hairy/E(SPL)
C Hairy, Fungal regulators
C Factors with PAS domain
C Yabby
C INO
C HLH domain only
B Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
C Ubiquitous bHLH-ZIP factors
C Cell cycle controlling factors, Myc
C Cell cycle controlling factors, Mad/Max
C Other bHLH-ZIP factors
B Other basic domains
C NF-1
C RF-X
C AP-2 (bHSH)
B Zinc finger
C Cys4 thyroid hormone receptor-like
C Cys4 hepatocyte nuclear factor 4-like
C Cys4 estrogen receptor-like
C Cys4 nerve growth factor IB-like
C Cys4 Fushi tarazu-F1-like
C Cys4 germ cell nuclear factor
C Cys4 Knirps/DAX1-like
C Cys4 GATA-factors
C Cys2His2 SP/KLF family and related proteins
C Cys2His2 GLI-like
C Cys2His2 Snail
C Cys2His2 BTB-ZF factors
C Cys2His2 BED
C Cys2His2 PRDM
C Cys2His2 metabolic regulators in fungi
C Cys2His2 others
C Cys2HisCys zinc factors
C Cys3His zinc factors
C Cys2CysHis zinc factors
C CXXC CpG-binding proteins
C Cys6 metabolic regulators in fungi
C Other zinc fingers
B Helix-turn-helix
C Homeo domain ANTP: HOXL
C Homeo domain ANTP: NKL
C Homeo domain Paired-related
C Homeo domain LIM
C Homeo domain POU
C Homeo domain SINE
C Homeo domain ZF
C Homeo domain CUT
C Homeo domain PROS
C Homeo domain TALE
C Homeo domain other
C Fork head/winged helix developmental regulators
C Fork head/winged helix tissue-specific regulators
C Fork head/winged helix cell cycle-controlling factors, E2F
C Fork head/winged helix cell cycle-controlling factors, DP
C Fork head/winged helix other regulators
C Heat shock factors
C Tryptophan clusters Myb, Myb-factors
C Tryptophan clusters Myb, Myb-like factors
C Tryptophan clusters Ets-type
C Tryptophan clusters interferon-regulating factors
C TEA domain
C ARID
B beta-Scaffold factors with minor groove contacts
C RHR (Rel homology region) Rel/Ankyrin
C RHR (Rel homology region) Ankyrin only
C RHR (Rel homology region) NF-AT
C STAT
C p53
C MADS-box regulators of differentiation, MEF-2
C MADS-box regulators of differentiation, Homeotic genes
C MADS-box regulators of differentiation, Yeast regulators
C MADS-box responders to external signals
C SAND domain-containing proteins
C TATA-binding proteins
C HMG SOX
C HMG TCF-1
C HMG2-related
C UBF
C Other HMG box factors
C Heteromeric CCAAT factors
C Grainyhead
C Cold-shock domain factors, DbpA-like
C Cold-shock domain factors, YB-1/DbpB-like
C Cold-shock domain factors, FRG Y2-like
C Runt
C MYRF
B Other transcription factors
C HMGI(Y)
C NUPR
E Line #4
C Pocket domain Rb
C Pocket domain CBP
C T-box
C DMRT
C LRRFIP
C TCP
C AP2/ERF
C WRKY
C LOB
C Copper-fist proteins fungal regulators
C Others
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AProkaryotic type
B Helix-turn-helix
C AraC family
D V568_200711 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D V568_200453 methylated-DNA-protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
C LysR family
D V568_200435 transcriptional regulator LysR K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D V568_200709 transcriptional regulator K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D V568_201005 oxyR_2; transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D V568_200640 LysR family transcriptional regulator protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D V568_200554 regulatory protein LysR K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein
C DeoR family
C LacI family
D V568_101987 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D V568_100021 LACI-family transcription regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D V568_101585 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D V568_201059 alanine racemase K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D V568_201106 Ribitol operon repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor
C GntR family
D V568_100983 transcriptional regulator K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D V568_200411 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D V568_200845 transcriptional regulator, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D V568_200427 Transcriptional regulator, GNTR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D V568_200131 Bacterial regulatory protein, GntR family K03710 K03710; GntR family transcriptional regulator
D V568_201200 GntR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
C TetR/AcrR family
D V568_101580 BetI family transcriptional regulator K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D V568_101854 TetR/AcrR family transcriptional regulator, acrAB operon repressor K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D V568_101866 TetR/AcrR family transcriptional regulator K09017 rutR; TetR/AcrR family transcriptional regulator
D V568_200899 Bacterial regulatory protein TetR, HTH motif protein K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity
C Lrp/AsnC family
D V568_100494 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D V568_200620 proline dehydrogenase K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D V568_100384 AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D V568_101246 transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D V568_200584 Bacterial regulatory protein, AsnC family K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon
C LuxR family
D V568_201250 LuxR family transcriptional regulator K21697 vjbR; LuxR family transcriptional regulator, quorum-sensing system regulator VjbR
C MarR family
D V568_100272 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D V568_200597 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D V568_200889 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D V568_200457 MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
C MerR family
D V568_101967 Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
C Fur family
D V568_100404 Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D V568_200191 Ferric-uptake regulator K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D V568_102226 Ferric-uptake regulator K09826 irr; Fur family transcriptional regulator, iron response regulator
C IclR family
D V568_200712 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
C CRP/FNR family
D V568_101475 CRP/FNR family transcriptional regulator, anaerobic regulatory protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D V568_201061 hypothetical protein K13642 ftrB; CRP/FNR family transcriptional regulator, transcriptional activator FtrB
D V568_201084 CRP/FNR family transcriptional regulator, anaerobic regulatory protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
D V568_201107 Crp family regulatory protein K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator
C Rrf2 family
D V568_200792 rrf2 family protein (transcriptional regulator) K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator
C ArsR family
D V568_100478 LysR family transcriptional regulator K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator
C XRE family
D V568_100892 putative transcriptional regulator K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
C PadR family
C Other families
D V568_101301 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
B Ribbon-helix-helix
C CopG family
D V568_200546 nickel responsive regulator K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator
C Other families
D V568_200622 hypothetical protein K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
B Other transcription factors
C BglG family
C Others
D V568_201095 FMN-binding domain-containing protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D V568_102067 frmR; Transcriptional repressor FrmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon
D V568_100047 BolA protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D V568_100012 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D V568_200104 plasmid partitioning protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D V568_100299 transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D V568_102023 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor
D V568_101980 TENA/THI-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D V568_200728 prokaryotic transcription elongation factor GreA/GreB K06140 rnk; regulator of nucleoside diphosphate kinase
D V568_101659 Putative transcriptional regulator K07735 algH; putative transcriptional regulator
D V568_101064 zinc finger protein K06204 dksA; RNA polymerase-binding transcription factor
D V568_101358 nrdR; NrdR family transcriptional regulator K07738 nrdR; transcriptional repressor NrdR
D V568_101243 protein containing Sel1-like repeat domain K25885 exoR; exopolysaccharide production negative regulator
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 5, 2024
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Classification taken and modified from TRANSFAC 7.0