+F Repair protein KO
#
DNA Repair and Recombination Proteins - Baudoinia panamericana
%
!
AEukaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D BAUCODRAFT_121510 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D BAUCODRAFT_67237 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D BAUCODRAFT_62992 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E BAUCODRAFT_63153 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E BAUCODRAFT_64646 hypothetical protein K20813 TDG; thymine-DNA glycosylase [EC:3.2.2.29]
E BAUCODRAFT_25224 hypothetical protein K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
E BAUCODRAFT_31576 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
E BAUCODRAFT_109370 hypothetical protein K10771 APEX1; AP endonuclease 1 [EC:3.1.11.2]
E BAUCODRAFT_32166 hypothetical protein K10772 APEX2; AP endonuclease 2 [EC:3.1.11.2]
D Long Patch-BER factors
E DNA polymerase delta complex
F BAUCODRAFT_31911 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
F BAUCODRAFT_79984 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
F BAUCODRAFT_38742 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
F BAUCODRAFT_39079 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
E DNA polymerase epsilon complex
F BAUCODRAFT_30681 hypothetical protein K02324 POLE; DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
F BAUCODRAFT_71065 hypothetical protein K02325 POLE2; DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
F BAUCODRAFT_61755 hypothetical protein K02326 POLE3; DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
F BAUCODRAFT_39142 hypothetical protein K03506 POLE4; DNA polymerase epsilon subunit 4 [EC:2.7.7.7]
E BAUCODRAFT_34951 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
E BAUCODRAFT_109503 hypothetical protein K04799 FEN1; flap endonuclease-1 [EC:3.1.-.-]
E BAUCODRAFT_21163 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
D Short Patch-BER factors
D Other BER factors
E BAUCODRAFT_32290 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E BAUCODRAFT_33217 hypothetical protein K08073 PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
E BAUCODRAFT_149887 hypothetical protein K10798 PARP2_3_4; poly [ADP-ribose] polymerase 2/3/4 [EC:2.4.2.30]
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E XPC-HR23B-CETN2 complex
F BAUCODRAFT_136268 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F BAUCODRAFT_59492 hypothetical protein K10838 XPC; xeroderma pigmentosum group C-complementing protein
F BAUCODRAFT_33528 hypothetical protein K10839 RAD23; UV excision repair protein RAD23
E Cul4-DDB2 complex
F BAUCODRAFT_106019 hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F BAUCODRAFT_32519 hypothetical protein K10609 CUL4; cullin 4
F BAUCODRAFT_116696 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
E NER4 complex
F BAUCODRAFT_24546 glycosyltransferase family 34 protein K15082 RAD7; DNA repair protein RAD7
F BAUCODRAFT_68713 hypothetical protein K15083 RAD16; DNA repair protein RAD16
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase II complex
F BAUCODRAFT_85149 hypothetical protein K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]
F BAUCODRAFT_65631 hypothetical protein K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
F BAUCODRAFT_123413 hypothetical protein K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
F BAUCODRAFT_125443 hypothetical protein K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
F BAUCODRAFT_34618 hypothetical protein K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
F BAUCODRAFT_36057 hypothetical protein K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
F BAUCODRAFT_228826 hypothetical protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
F BAUCODRAFT_31455 hypothetical protein K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9
F BAUCODRAFT_258454 hypothetical protein K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
F BAUCODRAFT_127330 hypothetical protein K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
E Cul4-CSA complex
F BAUCODRAFT_106019 hypothetical protein K03868 RBX1; E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
F BAUCODRAFT_32519 hypothetical protein K10609 CUL4; cullin 4
F BAUCODRAFT_116696 hypothetical protein K10610 DDB1; DNA damage-binding protein 1
F BAUCODRAFT_39329 hypothetical protein K10570 ERCC8; DNA excision repair protein ERCC-8
E Other TCR factor
F BAUCODRAFT_42604 hypothetical protein K10841 ERCC6; DNA excision repair protein ERCC-6
F BAUCODRAFT_33135 hypothetical protein K25829 ELOF1; transcription elongation factor 1
D TFIIH complex
E BAUCODRAFT_221487 hypothetical protein K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E BAUCODRAFT_502978 hypothetical protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
E BAUCODRAFT_411193 hypothetical protein K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E BAUCODRAFT_486555 hypothetical protein K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E BAUCODRAFT_300256 hypothetical protein K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E BAUCODRAFT_259506 hypothetical protein K03144 TFIIH4; transcription initiation factor TFIIH subunit 4
E BAUCODRAFT_78082 hypothetical protein K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E BAUCODRAFT_313765 hypothetical protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E BAUCODRAFT_435154 hypothetical protein K06634 CCNH; cyclin H
E BAUCODRAFT_64343 hypothetical protein K10842 MNAT1; CDK-activating kinase assembly factor MAT1
D RPA (replication factor A)
E BAUCODRAFT_71964 hypothetical protein K07466 RFA1; replication factor A1
E BAUCODRAFT_79701 hypothetical protein K10739 RFA2; replication factor A2
E BAUCODRAFT_31981 hypothetical protein K10740 RPA3; replication factor A3
D Other NER factors
E BAUCODRAFT_121694 hypothetical protein K10847 XPA; DNA-repair protein complementing XP-A cells
E BAUCODRAFT_44173 hypothetical protein K10849 ERCC1; DNA excision repair protein ERCC-1
E BAUCODRAFT_73572 hypothetical protein K10848 ERCC4; DNA excision repair protein ERCC-4 [EC:3.1.-.-]
E BAUCODRAFT_73871 hypothetical protein K10846 ERCC5; DNA excision repair protein ERCC-5
E BAUCODRAFT_21163 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E BAUCODRAFT_37132 hypothetical protein K15075 MET18; DNA repair/transcription protein MET18/MMS19
E BAUCODRAFT_507280 hypothetical protein K03869 CUL3; cullin 3
E BAUCODRAFT_303309 hypothetical protein K03872 ELOC; elongin-C
E BAUCODRAFT_25047 hypothetical protein K15077 ELA1; elongin-A
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
E BAUCODRAFT_501656 hypothetical protein K08735 MSH2; DNA mismatch repair protein MSH2
E BAUCODRAFT_39478 hypothetical protein K08736 MSH3; DNA mismatch repair protein MSH3
E BAUCODRAFT_111690 hypothetical protein K08737 MSH6; DNA mismatch repair protein MSH6
D MutL homologs
E BAUCODRAFT_152270 hypothetical protein K08734 MLH1; DNA mismatch repair protein MLH1
E BAUCODRAFT_33929 hypothetical protein K10858 PMS2; DNA mismatch repair protein PMS2
E BAUCODRAFT_40759 hypothetical protein K08739 MLH3; DNA mismatch repair protein MLH3
D DNA polymerase delta complex
E BAUCODRAFT_31911 hypothetical protein K02327 POLD1; DNA polymerase delta subunit 1 [EC:2.7.7.7]
E BAUCODRAFT_79984 hypothetical protein K02328 POLD2; DNA polymerase delta subunit 2
E BAUCODRAFT_38742 hypothetical protein K03504 POLD3; DNA polymerase delta subunit 3
E BAUCODRAFT_39079 hypothetical protein K03505 POLD4; DNA polymerase delta subunit 4
D RPA (replication factor A)
E BAUCODRAFT_71964 hypothetical protein K07466 RFA1; replication factor A1
E BAUCODRAFT_79701 hypothetical protein K10739 RFA2; replication factor A2
E BAUCODRAFT_31981 hypothetical protein K10740 RPA3; replication factor A3
D RFC (replication factor C)
E BAUCODRAFT_35017 hypothetical protein K10754 RFC1; replication factor C subunit 1
E BAUCODRAFT_35150 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
E BAUCODRAFT_34119 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
E BAUCODRAFT_147217 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
E BAUCODRAFT_523426 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
D Other MMR factors
E BAUCODRAFT_34951 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
E BAUCODRAFT_136211 hypothetical protein K10746 EXO1; exonuclease 1 [EC:3.1.-.-]
E BAUCODRAFT_21163 hypothetical protein K10747 LIG1; DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
E BAUCODRAFT_122932 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D MRN(MRX) complex
E BAUCODRAFT_78858 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11
D BRCA1-core complex
D BRCA1-A complex
D BRCA1-B complex
D BRCA1-C complex
E BAUCODRAFT_78858 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11
D BRCA complex
D RecA family proteins
D Rad52 family proteins
E BAUCODRAFT_23503 hypothetical protein K10873 RAD52; DNA repair and recombination protein RAD52
D Rad54 family proteins
E BAUCODRAFT_501788 hypothetical protein K10875 RAD54L; DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
E BAUCODRAFT_569497 hypothetical protein K10877 RAD54B; DNA repair and recombination protein RAD54B [EC:5.6.2.-]
D RecQ family DNA helicases
E BAUCODRAFT_63664 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
D Bloom's syndrome complex (BTR)
E BAUCODRAFT_63664 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E BAUCODRAFT_60941 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E BAUCODRAFT_54407 hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D RPA (replication factor A)
E BAUCODRAFT_71964 hypothetical protein K07466 RFA1; replication factor A1
E BAUCODRAFT_79701 hypothetical protein K10739 RFA2; replication factor A2
E BAUCODRAFT_31981 hypothetical protein K10740 RPA3; replication factor A3
D Protein phosphatase 4
E BAUCODRAFT_22318 hypothetical protein K17491 SMEK; protein phosphatase 4 regulatory subunit 3
D AP-5 complex
D SMC5-SMC6 complex
E BAUCODRAFT_123954 hypothetical protein K22803 SMC5; structural maintenance of chromosomes protein 5
E BAUCODRAFT_51868 hypothetical protein K22817 NSMCE1; non-structural maintenance of chromosomes element 1 [EC:2.3.2.27]
E BAUCODRAFT_82793 hypothetical protein K22756 NSMCE2; E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
E BAUCODRAFT_31590 hypothetical protein K22825 NSMCE4; non-structural maintenance of chromosomes element 4
D Other HR factors
E BAUCODRAFT_31237 hypothetical protein K10992 SFR1; Swi5-dependent recombination DNA repair protein 1
E BAUCODRAFT_47071 hypothetical protein K15078 SLX1; structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
E BAUCODRAFT_29098 hypothetical protein K15338 GEN1; holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
E BAUCODRAFT_35082 hypothetical protein K11339 MORF4L1; mortality factor 4-like protein 1
E BAUCODRAFT_102599 hypothetical protein K22766 FIGNL1; fidgetin-like protein 1 [EC:5.6.2.-]
E BAUCODRAFT_578032 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
E BAUCODRAFT_21762 hypothetical protein K22685 WSS1; DNA-dependent metalloprotease WSS1 [EC:3.4.24.-]
C NHEJ (non-homologous end-joining)
D DNA-PK complex
E BAUCODRAFT_395450 hypothetical protein K10884 XRCC6; ATP-dependent DNA helicase 2 subunit 1
E BAUCODRAFT_172807 hypothetical protein K10885 XRCC5; ATP-dependent DNA helicase 2 subunit 2
D MRX complex
E BAUCODRAFT_78858 hypothetical protein K10865 MRE11; double-strand break repair protein MRE11
D DNA Ligase 4 complex
E BAUCODRAFT_120861 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
E BAUCODRAFT_50649 hypothetical protein K10777 LIG4; DNA ligase 4 [EC:6.5.1.1]
D X-family DNA polymerases
E BAUCODRAFT_29694 hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
E BAUCODRAFT_85556 hypothetical protein K10981 POL4; DNA polymerase IV [EC:2.7.7.7]
D Other NHEJ factors
E BAUCODRAFT_32290 hypothetical protein K10863 APTX; aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
E BAUCODRAFT_25760 hypothetical protein K19619 TDP2; tyrosyl-DNA phosphodiesterase 2 [EC:3.1.4.-]
C FA (Fanconi anemia) pathway
D FA core complex
D FA core complex binding factors
E BAUCODRAFT_72850 hypothetical protein K11511 APITD1; centromere protein S
D Bloom's syndrome complex (BTR)
E BAUCODRAFT_63664 hypothetical protein K10901 BLM; bloom syndrome protein [EC:5.6.2.4]
E BAUCODRAFT_60941 hypothetical protein K03165 TOP3; DNA topoisomerase III [EC:5.6.2.1]
E BAUCODRAFT_54407 hypothetical protein K15364 NCE4; RecQ-mediated genome instability protein 1
D FANCD2-I complex
D Downstream FA components
D Other FA pathway factors
E BAUCODRAFT_91856 hypothetical protein K15363 FAN1; fanconi-associated nuclease 1 [EC:3.1.21.- 3.1.4.1]
E BAUCODRAFT_40554 hypothetical protein K11137 TELO2; telomere length regulation protein
E BAUCODRAFT_305390 hypothetical protein K15361 WDR48; WD repeat-containing protein 48
C Other DSBR factors
D Protein phosphatase 6
D Ubiquitin ligases
D Others
E BAUCODRAFT_79402 hypothetical protein K23314 WRAP53; telomerase Cajal body protein 1
E BAUCODRAFT_32706 hypothetical protein K24752 WDR70; WD repeat-containing protein 70
E BAUCODRAFT_122932 hypothetical protein K24755 WDR76; WD repeat-containing protein 76
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
D BAUCODRAFT_36277 hypothetical protein K03509 POLH; DNA polymerase eta [EC:2.7.7.7]
D BAUCODRAFT_91554 hypothetical protein K03510 POLI; DNA polymerase iota [EC:2.7.7.7]
D BAUCODRAFT_111160 hypothetical protein K03511 POLK; DNA polymerase kappa [EC:2.7.7.7]
D BAUCODRAFT_34584 hypothetical protein K03515 REV1; DNA repair protein REV1 [EC:2.7.7.-]
C B-family DNA polymerases
D BAUCODRAFT_120942 hypothetical protein K02350 REV3L; DNA polymerase zeta [EC:2.7.7.7]
C A-family DNA polymerase
C Rad6 epistasis group
D BAUCODRAFT_178186 hypothetical protein K10573 UBE2A; ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]
D BAUCODRAFT_52670 hypothetical protein K10627 RAD18; E3 ubiquitin-protein ligase RAD18 [EC:2.3.2.27]
D BAUCODRAFT_67041 hypothetical protein K15505 RAD5; DNA repair protein RAD5 [EC:5.6.2.-]
D BAUCODRAFT_101663 hypothetical protein K15711 SMARCA3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
D BAUCODRAFT_61103 hypothetical protein K10704 UBE2V; ubiquitin-conjugating enzyme E2 variant
D BAUCODRAFT_73523 hypothetical protein K10580 UBE2N; ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
C Other TLS factors
D BAUCODRAFT_34951 hypothetical protein K04802 PCNA; proliferating cell nuclear antigen
D BAUCODRAFT_64037 hypothetical protein K26957 GCNA; germ cell nuclear acidic protein
B Check point factors
C Rad9-Hus1-Rad1 complex
D BAUCODRAFT_33910 hypothetical protein K10903 HUS1; HUS1 checkpoint protein
D BAUCODRAFT_53211 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C HRAD17(Rad24)-RFC complex
D BAUCODRAFT_42897 hypothetical protein K06662 HRAD17; cell cycle checkpoint protein
D BAUCODRAFT_35150 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
D BAUCODRAFT_34119 hypothetical protein K10755 RFC2_4; replication factor C subunit 2/4
D BAUCODRAFT_147217 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
D BAUCODRAFT_523426 hypothetical protein K10756 RFC3_5; replication factor C subunit 3/5
C Rad17-Mec3-Ddc1 complex
D BAUCODRAFT_53211 hypothetical protein K02830 HRAD1; cell cycle checkpoint protein [EC:3.1.11.2]
C FPC (fork protection complex)
D BAUCODRAFT_125560 hypothetical protein K10997 TIMELESS; replication fork protection complex subunit TIMELESS/Tof1/Swi1
D BAUCODRAFT_125714 hypothetical protein K10998 TIPIN; replication fork protection complex subunit TIPIN/Csm3/Swi3
D BAUCODRAFT_126370 hypothetical protein K11272 MRC1; mediator of replication checkpoint protein 1
C Triple T complex
D BAUCODRAFT_40554 hypothetical protein K11137 TELO2; telomere length regulation protein
D BAUCODRAFT_376210 hypothetical protein K20403 TTI1; TELO2-interacting protein 1
C BAG6-UBL4A-GET4 complex
D BAUCODRAFT_33139 hypothetical protein K23388 UBL4; ubiquitin-like protein 4
D BAUCODRAFT_147254 hypothetical protein K23387 GET4; golgi to ER traffic protein 4
C Other check point factors
D BAUCODRAFT_77061 hypothetical protein K06640 ATR; serine/threonine-protein kinase ATR [EC:2.7.11.1]
D BAUCODRAFT_31809 hypothetical protein K04728 ATM; serine-protein kinase ATM [EC:2.7.11.1]
D BAUCODRAFT_436646 hypothetical protein K02216 CHEK1; serine/threonine-protein kinase CHEK1 [EC:2.7.11.1]
D BAUCODRAFT_318019 hypothetical protein K06641 CHEK2; serine/threonine-protein kinase CHEK2 [EC:2.7.11.1]
D BAUCODRAFT_22292 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D BAUCODRAFT_152711 hypothetical protein K06630 YWHAE; 14-3-3 protein epsilon
D BAUCODRAFT_34374 hypothetical protein K03114 SWE1; mitosis inhibitor protein kinase SWE1 [EC:2.7.11.1]
D BAUCODRAFT_60787 hypothetical protein K24664 FKH; forkhead protein FKH
D BAUCODRAFT_145421 hypothetical protein K12196 VPS4; vacuolar protein-sorting-associated protein 4
D BAUCODRAFT_122803 hypothetical protein K25059 SDE2; replication stress response regulator SDE2
B Other factors with a suspected DNA repair function
C DNA polymerases
D BAUCODRAFT_34410 hypothetical protein K02331 POL5; DNA polymerase phi [EC:2.7.7.7]
C Nucleases
D BAUCODRAFT_76521 hypothetical protein K15340 DCLRE1A; DNA cross-link repair 1A protein
D BAUCODRAFT_34426 hypothetical protein K17815 EXO5; exonuclease V [EC:3.1.-.-]
C Helicases
D BAUCODRAFT_30259 hypothetical protein K20098 ERCC6L2; DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
C PSO4 complex
D BAUCODRAFT_32416 hypothetical protein K10599 PRPF19; pre-mRNA-processing factor 19 [EC:2.3.2.27]
D BAUCODRAFT_27935 hypothetical protein K12860 CDC5L; pre-mRNA-splicing factor CDC5/CEF1
D BAUCODRAFT_276941 hypothetical protein K12861 BCAS2; pre-mRNA-splicing factor SPF27
D BAUCODRAFT_60799 hypothetical protein K12862 PLRG1; pleiotropic regulator 1
C Modulation of nucleotide pools
D BAUCODRAFT_184003 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D BAUCODRAFT_138578 hypothetical protein K10807 RRM1; ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
D BAUCODRAFT_66775 hypothetical protein K10808 RRM2; ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]
#
AProkaryotic type
B SSBR (single strand breaks repair)
C Direct repair
D BAUCODRAFT_121510 hypothetical protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D BAUCODRAFT_67237 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D BAUCODRAFT_62992 hypothetical protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
C BER (base exicision repair)
D DNA glycosylases
E BAUCODRAFT_63153 hypothetical protein K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
E BAUCODRAFT_121565 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
E BAUCODRAFT_153147 hypothetical protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
E BAUCODRAFT_31576 hypothetical protein K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D AP endonucleases
D RecJ
D DNA ligase
D DNA polymerase I
C NER (nucleotide excision repair)
D GGR (global genome repair) factors
E BAUCODRAFT_25859 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D TCR (transcription coupled repair) factors
E DNA-directed RNA polymerase complex (RNAP)
E TRCF (transcription-repair coupling factor)
C MMR (mismatch excision repair)
D Mismatch and loop recognition factors
D Molecular matchmaker
D Strand discrimination factor
D DNA exonucleases
D DNA polymerase III holoenzyme
D DNA ligase
D Other MMR factors
E BAUCODRAFT_25859 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
B DSBR (double strand breaks repair)
C HR (homologous recombination)
D RecBC pathway proteins
D RecFOR pathway proteins
D AddAB pathway proteins
D Other HR factor
D Archaeal homologous recombinant proteins
C NHEJ (non-homologous end-joining)
D Two-component NHEJ DNA repair complex
D SHIIR (short-homology-independent illegitimate recombination)
E Facilitator
E Supressor
D SHDIR (short-homology-dependent illegitimate recombination)
E RecET pathway
E Facilitator
E Supressor
B TLS (translesion DNA synthesis) factors
C Y-family DNA polymerases
C Other SOS response factors
B Other factors with a suspected DNA repair function
C DNA polymerase
C DNA helicases
C Modulation of nucleotide pools
D BAUCODRAFT_184003 hypothetical protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
C Others
!
#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: March 29, 2024