+E
#<h2><a href="/kegg/brite.html"><img src="/Fig/bget/kegg3.gif" align="middle" border=0></a>&nbsp; Transcription Machinery - Bombyx mori (domestic silkworm)</h2>
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A<b>Eukaryotic type</b>
B  RNA polymerase II system
C    RNA polymerase II
D      Core subunits
E        101745099 DNA-directed RNA polymerase II subunit RPB1	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        105842585 uncharacterized protein LOC105842585	K03006 RPB1; DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6] 
E        101746067 DNA-directed RNA polymerase II subunit RPB2	K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6] 
E        732923 DNA-directed RNA polymerase II polypeptide	K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3 
E        101737649 DNA-directed RNA polymerase II subunit RPB11	K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11 
D      Pol II specific subunits
E        101740659 DNA-directed RNA polymerase II subunit Rpb4	K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4 
E        101741478 DNA-directed RNA polymerase II subunit RPB7	K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7 
E        101745139 DNA-directed RNA polymerase II subunit RPB9	K03017 RPB9; DNA-directed RNA polymerase II subunit RPB9 
E        101743276 uncharacterized protein LOC101743276	K21987 POLR2M; DNA-directed RNA polymerase II subunit GRINL1A 
D      Pol I, II, III common subunits
E        101744152 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        692837 DNA-directed RNA polymerase subunit 6-like protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        101744611 DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        101736490 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        101739452 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
D      Pol IV and V specific subunits
C    Basal transcription factors
D      TFIIA
E        101745439 transcription initiation factor IIA subunit 1	K03122 TFIIA1; transcription initiation factor TFIIA large subunit 
E        733002 transcription initiation factor IIA gamma chain	K03123 TFIIA2; transcription initiation factor TFIIA small subunit 
D      TFIIB
E        101739506 transcription initiation factor IIB isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFIID
E        101741862 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        692612 Tbp; TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        101739652 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        101745855 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        101745654 transcription initiation factor TFIID subunit 3	K14650 TAF3; transcription initiation factor TFIID subunit 3 
E        101745755 transcription initiation factor TFIID subunit 4 isoform X4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        101746127 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        101743512 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        101744550 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        101741347 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        101745832 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        101736484 transcription initiation factor TFIID subunit 8	K14649 TAF8; transcription initiation factor TFIID subunit 8 
E        101741053 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        101743500 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        101735666 transcription initiation factor TFIID subunit 11	K03135 TAF11; transcription initiation factor TFIID subunit 11 
E        732959 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        733104 Taf13; TBP-associated factor 13 isoform 2	K03127 TAF13; transcription initiation factor TFIID subunit 13 
D      TFIIE
E        101742954 general transcription factor IIE subunit 1 isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
E        101742930 general transcription factor IIE subunit 2	K03137 TFIIE2; transcription initiation factor TFIIE subunit beta 
D      TFIIF
E        101738468 general transcription factor IIF subunit 1 isoform X1	K03138 TFIIF1; transcription initiation factor TFIIF subunit alpha 
E        101737741 general transcription factor IIF subunit 2	K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-] 
D      TFIIH
E        101745944 general transcription factor IIH subunit 1	K03141 TFIIH1; transcription initiation factor TFIIH subunit 1 
E        101744339 general transcription factor IIH subunit 2	K03142 TFIIH2; transcription initiation factor TFIIH subunit 2 
E        101735747 general transcription factor IIH subunit 3	K03143 TFIIH3; transcription initiation factor TFIIH subunit 3 
E        101745815 general transcription factor IIH subunit 4 isoform X2	K03144 TFIIH4; transcription initiation factor TFIIH subunit 4 
E        101736904 general transcription and DNA repair factor IIH helicase subunit XPB	K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4] 
E        101742294 general transcription and DNA repair factor IIH helicase subunit XPD isoform X1	K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3] 
E        105841376 general transcription factor IIH subunit 5	K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit 
E        100379321 Cdk7; cyclin dependent kinase 7	K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23] 
E        101747108 CDK-activating kinase assembly factor MAT1	K10842 MNAT1; CDK-activating kinase assembly factor MAT1 
E        101744462 cyclin-H	K06634 CCNH; cyclin H 
C    Mediator complex
D      Head
E        101737243 mediator of RNA polymerase II transcription subunit 6	K15128 MED6; mediator of RNA polymerase II transcription subunit 6 
E        101741483 mediator of RNA polymerase II transcription subunit 8	K15129 MED8; mediator of RNA polymerase II transcription subunit 8 
E        101742738 mediator of RNA polymerase II transcription subunit 11	K15131 MED11; mediator of RNA polymerase II transcription subunit 11 
E        101739503 mediator of RNA polymerase II transcription subunit 17	K15133 MED17; mediator of RNA polymerase II transcription subunit 17 
E        101736281 mediator of RNA polymerase II transcription subunit 18	K15135 MED18; mediator of RNA polymerase II transcription subunit 18 
E        101738557 mediator of RNA polymerase II transcription subunit 19	K15137 MED19; mediator of RNA polymerase II transcription subunit 19 
E        101745056 mediator of RNA polymerase II transcription subunit 20	K13528 MED20; mediator of RNA polymerase II transcription subunit 20 
E        732905 surfeit 5	K15139 MED22; mediator of RNA polymerase II transcription subunit 22 
E        692650 ix; mediator of RNA polymerase II transcription subunit 29	K15142 MED29; mediator of RNA polymerase II transcription subunit 29 
E        101740073 mediator of RNA polymerase II transcription subunit 30 isoform X1	K15143 MED30; mediator of RNA polymerase II transcription subunit 30 
D      Middle
E        101743196 mediator of RNA polymerase II transcription subunit 1	K15144 MED1; mediator of RNA polymerase II transcription subunit 1 
E        101746442 mediator of RNA polymerase II transcription subunit 4	K15146 MED4; mediator of RNA polymerase II transcription subunit 4 
E        101737954 mediator of RNA polymerase II transcription subunit 7	K15148 MED7; mediator of RNA polymerase II transcription subunit 7 
E        101740037 mediator of RNA polymerase II transcription subunit 9	K15149 MED9; mediator of RNA polymerase II transcription subunit 9 
E        101741409 mediator of RNA polymerase II transcription subunit 10	K15151 MED10; mediator of RNA polymerase II transcription subunit 10 
E        101745555 mediator of RNA polymerase II transcription subunit 21	K15152 MED21; mediator of RNA polymerase II transcription subunit 21 
E        101738806 mediator of RNA polymerase II transcription subunit 31	K15153 MED31; mediator of RNA polymerase II transcription subunit 31 
D      Tail
E        101744980 mediator of RNA polymerase II transcription subunit 14	K15156 MED14; mediator of RNA polymerase II transcription subunit 14 
E        101736723 mediator of RNA polymerase II transcription subunit 15 isoform X1	K15157 MED15; mediator of RNA polymerase II transcription subunit 15 
E        101747027 mediator of RNA polymerase II transcription subunit 16	K15159 MED16; mediator of RNA polymerase II transcription subunit 16 
D      CDK-module
E        100316862 cdk8; cyclin dependent kinase 8	K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23] 
E        101737391 cyclin-C	K15161 CCNC; cyclin-C 
E        101736174 mediator of RNA polymerase II transcription subunit 12 isoform X1	K15162 MED12; mediator of RNA polymerase II transcription subunit 12 
E        101747187 mediator of RNA polymerase II transcription subunit 13 isoform X1	K15164 MED13; mediator of RNA polymerase II transcription subunit 13 
D      Other mediators
E        101737120 mediator of RNA polymerase II transcription subunit 23 isoform X1	K15166 MED23; mediator of RNA polymerase II transcription subunit 23 
E        101741503 mediator of RNA polymerase II transcription subunit 24	K15167 MED24; mediator of RNA polymerase II transcription subunit 24 
E        101738710 mediator of RNA polymerase II transcription subunit 25 isoform X4	K15168 MED25; mediator of RNA polymerase II transcription subunit 25 
E        101740855 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1	K15169 MED26; mediator of RNA polymerase II transcription subunit 26 
E        101738836 mediator of RNA polymerase II transcription subunit 27	K15170 MED27; mediator of RNA polymerase II transcription subunit 27 
C    Coactivators
D      SAGA/TFTC/STAGA complex
E        101736749 histone acetyltransferase KAT2A isoform X1	K06062 PCAF; histone acetyltransferase [EC:2.3.1.48] 
E        101740829 transcription-associated protein 1 isoform X1	K08874 TRRAP; transformation/transcription domain-associated protein 
E        101745291 transcription initiation protein SPT3 homolog	K11313 SUPT3H; transcription initiation protein SPT3 
E        105841642 transcriptional adapter 2A	K11314 TADA2A; transcriptional adapter 2-alpha 
E        101743634 transcriptional adapter 2B isoform X1	K15127 TADA2B; transcriptional adapter 2-beta 
E        732883 transcriptional adaptor 3	K11315 TADA3; transcriptional adapter 3 
E        101741391 transcriptional adapter 1	K11317 TADA1; transcriptional adapter 1 
E        101745855 transcription initiation factor TFIID subunit 2	K03128 TAF2; transcription initiation factor TFIID subunit 2 
E        101745755 transcription initiation factor TFIID subunit 4 isoform X4	K03129 TAF4; transcription initiation factor TFIID subunit 4 
E        101746127 transcription initiation factor TFIID subunit 5	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        101743512 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L	K03130 TAF5; transcription initiation factor TFIID subunit 5 
E        101744550 transcription initiation factor TFIID subunit 6 isoform X1	K03131 TAF6; transcription initiation factor TFIID subunit 6 
E        101741347 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        101745832 transcription initiation factor TFIID subunit 7	K03132 TAF7; transcription initiation factor TFIID subunit 7 
E        101741053 transcription initiation factor TFIID subunit 9	K03133 TAF9B; transcription initiation factor TFIID subunit 9B 
E        101743500 transcription initiation factor TFIID subunit 10	K03134 TAF10; transcription initiation factor TFIID subunit 10 
E        732959 transcription initiation factor TFIID subunit 12	K03126 TAF12; transcription initiation factor TFIID subunit 12 
E        101743816 SAGA-associated factor 11 homolog	K11363 SGF11; SAGA-associated factor 11 
E        101736998 SAGA-associated factor 29 isoform X2	K11364 SGF29; SAGA-associated factor 29 
E        101747121 uncharacterized protein LOC101747121	K11316 SUPT7L; STAGA complex 65 subunit gamma 
E        101747215 uncharacterized protein LOC101747215	K11318 ATXN7; ataxin-7 
E        100134916 CHD1; chromodomain-helicase-DNA-binding protein 1	K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-] 
E        101737857 transcription and mRNA export factor ENY2	K11368 ENY2; enhancer of yellow 2 transcription factor 
E        101739561 ubiquitin carboxyl-terminal hydrolase nonstop	K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12] 
E        101738508 splicing factor 3B subunit 3 isoform X1	K12830 SF3B3; splicing factor 3B subunit 3 
D      BAF/PBAF complex
E        101737502 ATP-dependent helicase brm	K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-] 
E        101744352 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
E        101743239 SWI/SNF complex subunit SMARCC2 isoform X1	K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C 
E        101735816 brahma-associated protein of 60 kDa isoform X1	K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 
E        101741792 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1	K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 
E        100145916 A4; actin, cytoplasmic A4	K05692 ACTB_G1; actin beta/gamma 1 
E        100145915 A3; actin, cytoplasmic A3	K05692 ACTB_G1; actin beta/gamma 1 
E        101741323 actin-like protein 6A isoform X1	K11652 ACTL6B; actin-like protein 6B 
E        101745976 trithorax group protein osa isoform X1	K11653 ARID1; AT-rich interactive domain-containing protein 1 
E        101738029 AT-rich interactive domain-containing protein 2 isoform X1	K11765 ARID2; AT-rich interactive domain-containing protein 2 
E        101739097 protein polybromo-1 isoform X1	K11757 PBRM1; protein polybromo-1 
D      SWI/SNF complex
E        101744352 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1	K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 
D      RSC complex
D      Others
E        101743454 RNA polymerase II transcriptional coactivator isoform X2	K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15 
E        101743389 cell division cycle and apoptosis regulator protein 1	K25827 CCAR1; cell division cycle and apoptosis regulator protein 1 
C    Other transcription-related factors
D      Transcription elongation factors
E        732942 transcription elongation factor S-II	K03145 TFIIS; transcription elongation factor S-II 
E        101742810 transcription elongation factor SPT4-A	K15171 SUPT4H1; transcription elongation factor SPT4 
E        101739121 transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
E        101738765 transcription elongation factor SPT6	K11292 SUPT6H; transcription elongation factor SPT6 
D      Transcription termination factor
E        101741943 transcription termination factor 2	K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-] 
E        101744068 pre-mRNA cleavage complex 2 protein Pcf11 isoform X1	K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 
E        101745127 cleavage and polyadenylation specificity factor subunit 1	K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1 
E        101737197 cleavage and polyadenylation specificity factor 73 isoform X1	K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-] 
E        733099 cleavage and polyadenylation specific factor 4	K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4 
E        101737641 serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        733020 protein phosphatase 1 catalytic subunit	K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16] 
E        101739316 symplekin	K06100 SYMPK; symplekin 
E        732981 Ssu72; Ssu72 RNA polymerase II CTD phosphatase	K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16] 
E        101746473 5'-3' exoribonuclease 2 homolog	K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] 
E        101742694 decapping nuclease DXO homolog isoform X1	K14845 RAI1; RAT1-interacting protein 
E        101740071 regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1	K15559 RTT103; regulator of Ty1 transposition protein 103 
E        692965 Psf; PTB-associated splicing factor	K13219 SFPQ; splicing factor, proline- and glutamine-rich 
E        101744893 SR-related and CTD-associated factor 4 isoform X1	K13191 RBM16; RNA-binding protein 16 
E        692898 rotamase Pin1	K09578 PIN1; peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8] 
D      PAF1 complex
E        101737094 RNA polymerase II-associated factor 1 homolog	K15174 PAF1; RNA polymerase II-associated factor 1 
E        101739411 parafibromin	K15175 CDC73; parafibromin 
E        101742618 RNA polymerase-associated protein CTR9 homolog	K15176 CTR9; RNA polymerase-associated protein CTR9 
E        101738096 another transcription unit protein	K15177 LEO1; RNA polymerase-associated protein LEO1 
E        101743014 RNA polymerase-associated protein Rtf1	K15178 RTF1; RNA polymerase-associated protein RTF1 
D      NELF complex
E        101735821 negative elongation factor A isoform X2	K15179 WHSC2; negative elongation factor A 
E        101744913 negative elongation factor B	K15180 COBRA1; negative elongation factor B 
E        101737028 negative elongation factor D	K15181 TH1L; negative elongation factor C/D 
E        101745628 negative elongation factor E	K15182 RDBP; negative elongation factor E 
D      Super elongation complex (SEC)
E        101740554 RNA polymerase II elongation factor Ell isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
E        101736526 ell-associated factor Eaf	K15186 EAF; ELL-associated factor 
E        101743185 protein ENL	K15187 MLLT1_3; YEATS domain-containing protein 1/3 
E        101747230 cyclin-T isoform X1	K15188 CCNT; cyclin T 
E        100379322 Cdk9; cyclin dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      Little elongation complex (LEC)
E        101740554 RNA polymerase II elongation factor Ell isoform X1	K15183 ELL; RNA polymerase II elongation factor ELL 
D      Brd4/P-TEFb complex
E        101747230 cyclin-T isoform X1	K15188 CCNT; cyclin T 
E        100379322 Cdk9; cyclin dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      BUR kinase complex
D      CTDK-I complex
D      7SK RNP complex
E        101735632 protein HEXIM1	K15189 HEXIM1_2; protein HEXIM1/2 
E        101743850 7SK snRNA methylphosphate capping enzyme bin3	K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-] 
E        101740326 la-related protein 7 isoform X2	K15191 LARP7; La-related protein 7 
E        101747230 cyclin-T isoform X1	K15188 CCNT; cyclin T 
E        100379322 Cdk9; cyclin dependent kinase 9	K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23] 
D      DBIRD complex
D      Others
E        101746640 TATA-binding protein-associated factor 172 isoform X1	K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-] 
E        101736852 protein Dr1	K21751 DR1; down-regulator of transcription 1 
E        101746654 uncharacterized protein LOC101746654	K21752 DRAP1; Dr1-associated corepressor 
E        101739878 protein SPT2 homolog	K15193 SPTY2D1; protein SPT2 
E        101737093 RNA polymerase II subunit A C-terminal domain phosphatase isoform X1	K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16] 
E        101740688 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1	K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16] 
E        101746900 protein IWS1 homolog isoform X1	K17498 SPN1; transcription factor SPN1 
E        101743418 uncharacterized protein LOC101743418	K17494 CSRNP; cysteine/serine-rich nuclear protein 
E        101746011 RNA polymerase II-associated protein 1	K20826 RPAP1; RNA polymerase II-associated protein 1 
E        101736051 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2	K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16] 
E        693089 TPR-repeat protein	K23002 RPAP3; RNA polymerase II-associated protein 3 
E        101735483 cyclin-K	K23326 CCNK; cyclin K 
E        101740625 GPN-loop GTPase 3	K24104 GPN; GPN-loop GTPase 
E        101737084 GPN-loop GTPase 2	K24104 GPN; GPN-loop GTPase 
E        101736249 GPN-loop GTPase 1	K24104 GPN; GPN-loop GTPase 
B  RNA polymerase III system
C    RNA polymerase III
D      Core subunits
E        101739499 DNA-directed RNA polymerase III subunit RPC1 isoform X1	K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6] 
E        101737159 DNA-directed RNA polymerase III subunit RPC2	K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6] 
E        101739534 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        101744943 probable DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol III specific subunits
E        101741060 DNA-directed RNA polymerase III subunit RPC3 isoform X1	K03023 RPC3; DNA-directed RNA polymerase III subunit RPC3 
E        101743929 DNA-directed RNA polymerase III subunit RPC4	K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4 
E        101745782 DNA-directed RNA polymerase III subunit RPC5	K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5 
E        101737098 DNA-directed RNA polymerase III subunit RPC6	K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6 
E        101745151 DNA-directed RNA polymerase III subunit RPC7-like	K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7 
E        101746123 DNA-directed RNA polymerase III subunit RPC8	K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8 
E        692930 calcitonin gene-related peptide-receptor component protein	K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9 
D      Pol I, II, III common subunits
E        101744152 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        692837 DNA-directed RNA polymerase subunit 6-like protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        101744611 DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        101736490 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        101739452 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      TFIIIA
E        101742837 gastrula zinc finger protein XlCGF17.1	K09191 GTF3A; general transcription factor IIIA 
E        101745411 zinc finger protein 271	K09191 GTF3A; general transcription factor IIIA 
E        101738831 gastrula zinc finger protein XlCGF62.1-like	K09191 GTF3A; general transcription factor IIIA 
E        101745270 gastrula zinc finger protein xLCGF3.1-like	K09191 GTF3A; general transcription factor IIIA 
E        101745700 zinc finger protein 235-like	K09191 GTF3A; general transcription factor IIIA 
E        101745552 zinc finger protein 678-like	K09191 GTF3A; general transcription factor IIIA 
E        101738426 uncharacterized protein LOC101738426 isoform X1	K09191 GTF3A; general transcription factor IIIA 
E        105841703 zinc finger protein 431	K09191 GTF3A; general transcription factor IIIA 
D      TFIIIB
E        101741862 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        692612 Tbp; TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        101739652 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        692609 Brf; TFIIB-related factor	K15196 BRF1; transcription factor IIIB 90 kDa subunit 
E        101747231 transcription factor TFIIIB component B''	K15198 BDP1; transcription factor TFIIIB component B'' 
D      TFIIIC
E        101743413 uncharacterized protein LOC101743413 isoform X1	K15200 GTF3C2; general transcription factor 3C polypeptide 2 
E        101742229 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
E        101745913 general transcription factor 3C polypeptide 6 isoform X1	K15203 GTF3C6; general transcription factor 3C polypeptide 6 
D      TFIIIC, fungi type
E        101742229 general transcription factor 3C polypeptide 5	K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1) 
C    Other transcription-related factors
D      snRNA-activating protein complex (SNAPc)
E        101737951 snRNA-activating protein complex subunit 1	K15208 SNAPC1; snRNA-activating protein complex subunit 1 
E        101746030 snRNA-activating protein complex subunit 3	K15210 SNAPC3; snRNA-activating protein complex subunit 3 
D      Octamer transcription factors
E        101744796 protein nubbin isoform X1	K09364 POU2F; POU domain transcription factor, class 2 
D      Others
E        101736453 repressor of RNA polymerase III transcription MAF1 homolog isoform X2	K25817 MAF1; repressor of RNA polymerase III transcription MAF1 
B  RNA polymerase I system
C    RNA polymerase I
D      Core subunits
E        101746840 DNA-directed RNA polymerase I subunit RPA1	K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6] 
E        101736995 DNA-directed RNA polymerase I subunit RPA2	K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6] 
E        101739534 DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1	K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1 
E        101744943 probable DNA-directed RNA polymerases I and III subunit RPAC2	K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2 
D      Pol I specific subunits
E        101743619 uncharacterized protein LOC101743619	K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49 
E        100379192 RPA43_N; RPA43_N protein	K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43 
E        693115 Znrd1; transcription-associated zinc ribbon protein	K03000 RPA12; DNA-directed RNA polymerase I subunit RPA12 
D      Pol I, II, III common subunits
E        101744152 DNA-directed RNA polymerases I, II, and III subunit RPABC1	K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1 
E        692837 DNA-directed RNA polymerase subunit 6-like protein	K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2 
E        101744611 DNA-directed RNA polymerases I, II, and III subunit RPABC3	K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3 
E        101736490 DNA-directed RNA polymerases I, II, and III subunit RPABC4	K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4 
E        101739452 DNA-directed RNA polymerases I, II, and III subunit RPABC5	K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5 
C    Basal transcription factors
D      SL1/TIF-1B
E        101741862 TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        692612 Tbp; TATA-box-binding protein	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
E        101739652 TATA box-binding protein-like 1	K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein 
C    Other transcription-related factors
D      UBF
D      Transcription initiation factors
E        101743417 RNA polymerase I-specific transcription initiation factor RRN3	K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 
E        101746736 upstream activation factor subunit spp27 isoform X1	K15223 UAF30; upstream activation factor subunit UAF30 
D      Transcription elongation factors
E        101742810 transcription elongation factor SPT4-A	K15171 SUPT4H1; transcription elongation factor SPT4 
E        101739121 transcription elongation factor SPT5 isoform X1	K15172 SUPT5H; transcription elongation factor SPT5 
D      NoRC (nucleolar remodeling complex)
E        101744798 chromatin-remodeling complex ATPase chain Iswi isoform X2	K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-] 
D      CTDK-I complex
D      Transcription termination factors
D      Others
E        101741956 nucleolar protein dao-5 isoform X1	K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1 
#
A<b>Prokaryotic type</b>
B  Bacterial type
C    RNA polymerase
D      Core subunits
D      Sigma factors
C    Other transcription-related factors
D      RNA polymerase-associated proteins
D      Transcription elongation factors
D      Transcription termination factor
B  Archaeal type
C    RNA polymerase
D      Core subunits
C    Basal transcription factors
D      TFB
E        101739506 transcription initiation factor IIB isoform X1	K03124 TFIIB; transcription initiation factor TFIIB 
D      TFE
E        101742954 general transcription factor IIE subunit 1 isoform X1	K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha 
D      TFS
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#Last updated: April 9, 2024