+D GENES KO
#
KEGG Orthology (KO) - Halobacteriovorax marinus
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bmx00010]
D BMS_2752 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BMS_3041 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BMS_1222 fba; putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BMS_2885 tpiA; triosephosphate isomerase (TIM) (Triose-phosphate isomerase) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BMS_2883 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BMS_0442 putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BMS_3040 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BMS_1644 eno; putative Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BMS_2502 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BMS_2943 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D BMS_0672 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_1185 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BMS_1792 Probable NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D BMS_3218 putative dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D BMS_0987 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BMS_2512 pgmA; putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BMS_0443 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:bmx00020]
D BMS_1018 gltA; putative citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D BMS_2422 acnA; putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D BMS_0921 icd; putative isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D BMS_2258 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D BMS_2257 odhB; putative dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2186 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BMS_2187 sucC; succinyl-CoA synthetase beta chain (SCS-beta) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BMS_0474 putative succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BMS_2197 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BMS_0475 putative succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BMS_2198 fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BMS_0473 fumarate reductase transmembrane cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BMS_2196 putative cytochrome B subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BMS_0823 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BMS_1465 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BMS_0443 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D BMS_0672 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bmx00030]
D BMS_2752 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BMS_3419 rpe; putative ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BMS_0336 putative transketolase C-terminal part K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BMS_0337 putative transketolase, thiamine disphosphate-binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BMS_1113 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BMS_3150 tkt'; putative 1-deoxy-d-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BMS_3151 tkt; putative transketolase, thiamine disphosphate-binding N subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BMS_2020 tal; putative transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D BMS_3033 rpiB; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D BMS_2058 deoC; deoxyribose-phosphate aldolase (Phosphodeoxyriboaldolase) (Deoxyriboaldolase) (DERA) K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D BMS_2512 pgmA; putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BMS_3407 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BMS_1222 fba; putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BMS_3041 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:bmx00040]
D BMS_2956 udg; putative UDP-glucose dehydrogenase (CPS biosynthesis) K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BMS_3412 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BMS_3419 rpe; putative ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D BMS_3105 putative sorbitol/galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
C 00051 Fructose and mannose metabolism [PATH:bmx00051]
D BMS_2870 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BMS_2540 manC; putative mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BMS_3389 putative nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BMS_3041 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BMS_3105 putative sorbitol/galactitol-1-phosphate 5-dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14]
D BMS_2990 putative UDP-glucose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D BMS_1222 fba; putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BMS_2885 tpiA; triosephosphate isomerase (TIM) (Triose-phosphate isomerase) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BMS_3033 rpiB; ribose 5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:bmx00052]
D BMS_3136 putative UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0328 exoB; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0481 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0372 putative epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_3154 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0369 putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_1207 wbiG; putative epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_3412 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BMS_2512 pgmA; putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BMS_3041 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism [PATH:bmx00053]
D BMS_2956 udg; putative UDP-glucose dehydrogenase (CPS biosynthesis) K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D BMS_0399 hpaI; 6 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
C 00500 Starch and sucrose metabolism [PATH:bmx00500]
D BMS_3412 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BMS_0381 putative LPS biosynthesis-related sugar-phosphate nucleotidyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D BMS_2879 putative beta-amylase precursor K01177 E3.2.1.2; beta-amylase [EC:3.2.1.2]
D BMS_1056 putative beta-amylase precursor K01177 E3.2.1.2; beta-amylase [EC:3.2.1.2]
D BMS_2512 pgmA; putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BMS_2752 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bmx00520]
D BMS_2465 putative sugar hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BMS_3230 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BMS_0194 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BMS_2124 glmM; putative phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D BMS_0193 gcaD; putative UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D BMS_2145 conserved hypothetical protein K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D BMS_3390 conserved hypothetical protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D BMS_0629 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BMS_0066 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BMS_0345 wbpP; UDP-N-acetylglucosamine C4 epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D BMS_0344 puttive UDP-glucose/GDP mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D BMS_0356 possible sugar nucleotide epimerase/dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D BMS_0364 putative polysaccharide biosynthesis protein K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D BMS_0363 neuA; acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D BMS_2512 pgmA; putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BMS_3412 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BMS_2956 udg; putative UDP-glucose dehydrogenase (CPS biosynthesis) K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BMS_3136 putative UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0328 exoB; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0481 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0372 putative epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_3154 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0369 putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_1207 wbiG; putative epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_2752 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BMS_2870 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BMS_3389 putative nucleotidyl transferase K00966 GMPP; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BMS_2540 manC; putative mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BMS_3122 putative pilin glycosylation protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D BMS_2990 putative UDP-glucose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D BMS_0381 putative LPS biosynthesis-related sugar-phosphate nucleotidyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D BMS_0382 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D BMS_0379 rfbH; putative dehydratase RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D BMS_0380 rfbE; DNTP-hexose dehydratase-epimerase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
C 00620 Pyruvate metabolism [PATH:bmx00620]
D BMS_0987 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BMS_0672 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_1185 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BMS_1792 Probable NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D BMS_3218 putative dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D BMS_2502 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BMS_0489 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BMS_0135 accB; putative acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BMS_0136 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BMS_3269 putative biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BMS_1884 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D BMS_2638 putative glyoxalase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D BMS_2594 gloB; probable hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D BMS_0497 maeB; NADP-dependent malate dehydrogenase (decarboxylating) K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D BMS_1465 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BMS_0823 fumC; fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D BMS_0443 pckA; phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D BMS_2943 ppdK; pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bmx00630]
D BMS_0987 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BMS_1465 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BMS_1018 gltA; putative citrate synthase I K01647 CS; citrate synthase [EC:2.3.3.1]
D BMS_2422 acnA; putative aconitate hydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1283 putative lactoylglutathione lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BMS_3270 putative propionyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D BMS_3249 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BMS_0651 putative dehydrogenase K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D BMS_0880 katB; catalase precursor K03781 katE; catalase [EC:1.11.1.6]
D BMS_1768 D-isomer specific 2-hydroxyacid dehydrogenase K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D BMS_2156 haloacid dehalogenase-like hydrolase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D BMS_2227 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BMS_2795 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BMS_1843 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D BMS_3344 gcvT; putative aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_3345 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00640 Propanoate metabolism [PATH:bmx00640]
D BMS_0987 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BMS_1223 putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D BMS_3178 pdhAB; putative pyruvate (oxoisovalerate) Dehydrogenase, alpha-beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2770 bcd; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D BMS_0489 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BMS_0135 accB; putative acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BMS_0136 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BMS_3269 putative biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BMS_1884 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BMS_3270 putative propionyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D BMS_1283 putative lactoylglutathione lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BMS_3249 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BMS_2187 sucC; succinyl-CoA synthetase beta chain (SCS-beta) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BMS_2186 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D BMS_0595 iolA; malonic semialdehyde oxidative decarboxylase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D BMS_2460 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
C 00650 Butanoate metabolism [PATH:bmx00650]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2772 hbdA; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_2771 crt1; 3-hydroxybutyryl-CoA dehydratase (crotonase) K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_2770 bcd; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D BMS_0474 putative succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BMS_2197 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BMS_0475 putative succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BMS_2198 fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BMS_0473 fumarate reductase transmembrane cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BMS_2196 putative cytochrome B subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BMS_1991 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D BMS_1983 scoA; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D BMS_1871 atoD1; acetate CoA-transferase alpha subunit 1 K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D BMS_1982 putative coenzyme A transferase subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D BMS_1872 putative 3-oxoadipate CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
C 00660 C5-Branched dibasic acid metabolism
D BMS_2187 sucC; succinyl-CoA synthetase beta chain (SCS-beta) K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D BMS_2186 sucD; succinyl-CoA synthetase alpha chain K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00562 Inositol phosphate metabolism [PATH:bmx00562]
D BMS_0612 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D BMS_0595 iolA; malonic semialdehyde oxidative decarboxylase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D BMS_2885 tpiA; triosephosphate isomerase (TIM) (Triose-phosphate isomerase) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bmx00190]
D BMS_0024 nuoA; NADH dehydrogenase I chain A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D BMS_2251 putative NADH-quinone oxidoreductase chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D BMS_2561 nuoB; NADH dehydrogenase I chain B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D BMS_2560 putative NADH dehydrogenase subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D BMS_2559 nuoD; NADH dehydrogenase I chain D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D BMS_2250 putative NADH dehydrogenase I chain C/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2]
D BMS_0025 nuoH; putative NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D BMS_2558 nuoI; putative NADH dehydrogenase I subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D BMS_0026 nuoJ; putative NADH dehydrogenase chain J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D BMS_0027 nuoK; putative transmembrane NADH-ubiquinone oxidoreductase subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D BMS_0028 nuoL; NADH dehydrogenase I chain L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D BMS_0029 nuoM; putative NADH-ubiquinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D BMS_0030 nuoN; putative NADH-quinone oxidoreductase chain N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D BMS_2006 putative transmembrane NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D BMS_0474 putative succinate dehydrogenase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BMS_2197 fumarate reductase K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D BMS_0475 putative succinate dehydrogenase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BMS_2198 fumarate reductase iron-sulfur protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D BMS_0473 fumarate reductase transmembrane cytochrome b subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BMS_2196 putative cytochrome B subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D BMS_0218 putative protoheme IX farnesyltransferase (heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141]
D BMS_0224 putative membrane protein K02277 coxD; cytochrome c oxidase subunit IV [EC:7.1.1.9]
D BMS_0211 ctaE; putative transmembrane cytochrome oxidase subunit K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D BMS_0221 putative cytochrome O ubiquinol oxidase K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D BMS_0220 ctaD; cytochrome c oxidase polypeptide I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D BMS_0219 putative cytochrome c oxidase subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D BMS_0217 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D BMS_1401 putative cytochrome C oxidase subunit K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D BMS_1399 putative cytochrome c K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D BMS_3437 atpA; ATP synthase F1 sector alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BMS_3435 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BMS_3436 atpG; putative ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BMS_3438 putative ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BMS_3434 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BMS_0009 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BMS_3439 putative ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BMS_3440 putative ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BMS_0010 atpE; ATP synthase C chain (lipid-binding protein) (dicyclohexylcarbodiimide-binding protein) K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BMS_1667 ppa; putative inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:bmx00680]
D BMS_1185 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BMS_1184 esd; esterase D K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D BMS_2795 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BMS_1644 eno; putative Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BMS_1465 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BMS_1222 fba; putative fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D BMS_3041 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BMS_0987 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BMS_0442 putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BMS_3040 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BMS_2245 putative dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D BMS_2221 putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BMS_1543 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D BMS_2472 putative ribosomal protein S6 modification protein K14940 cofF; gamma-F420-2:alpha-L-glutamate ligase [EC:6.3.2.32]
C 00910 Nitrogen metabolism [PATH:bmx00910]
D BMS_1144 putative dioxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D BMS_3022 conserved hypothetical protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D BMS_3045 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D BMS_2227 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BMS_0916 putative carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bmx00061]
D BMS_0489 accA; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D BMS_0135 accB; putative acetyl-CoA carboxylase biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D BMS_0136 accC; biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BMS_3269 putative biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D BMS_1884 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D BMS_2793 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D BMS_1443 putative acyl carrier protein K02078 acpP; acyl carrier protein
D BMS_2791 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BMS_1327 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BMS_2790 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BMS_1444 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BMS_2794 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BMS_0467 probable short chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_1431 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_2792 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_0580 fabZ; (3R)-hydroxymyristol-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BMS_1432 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BMS_1433 putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BMS_2055 fabI; putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BMS_1717 putative 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D BMS_0149 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BMS_2863 fadD; long-chain-fatty-acid--CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bmx00071]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_2770 bcd; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D BMS_3396 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D BMS_0149 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BMS_2863 fadD; long-chain-fatty-acid--CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BMS_1185 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bmx00561]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D BMS_1792 Probable NADP-dependent alcohol dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D BMS_3218 putative dehydrogenase K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D BMS_3424 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D BMS_2033 putative glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BMS_1700 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BMS_3245 putative exported protein K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
C 00564 Glycerophospholipid metabolism [PATH:bmx00564]
D BMS_2528 gpsA; glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D BMS_1490 putative aerobic glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D BMS_2033 putative glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BMS_1700 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D BMS_0350 tagD; glycerol-3-phosphate cytidylyltransferase K00980 tagD; glycerol-3-phosphate cytidylyltransferase [EC:2.7.7.39]
D BMS_1363 putative phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D BMS_2079 putative glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D BMS_0234 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BMS_0478 possible phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D BMS_0238 pssA; putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D BMS_0305 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D BMS_0156 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D BMS_0960 putative phopholipase D-family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D BMS_1290 hypothetical protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D BMS_2138 putative phospholipase D protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:bmx00600]
D BMS_0949 putative hydroxylase K04712 DEGS; sphingolipid 4-desaturase/C4-monooxygenase [EC:1.14.19.17 1.14.18.5]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids [PATH:bmx01040]
D BMS_2421 putative inner membrane fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D BMS_1350 putative acyl-CoA thioesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D BMS_1356 yciA; putative acyl-coA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bmx00230]
D BMS_1127 putative ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D BMS_2512 pgmA; putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BMS_3407 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D BMS_1601 purF; putative amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BMS_1604 purD; putative phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D BMS_1607 purQ; putative phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D BMS_1606 purL; putative phosphoribosylformylglycinamidine synthase II K23270 purSL; phosphoribosylformylglycinamidine synthase subunit PurSL [EC:6.3.5.3]
D BMS_1609 purM; putative Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D BMS_1602 purE; putative phosphoribosylaminoimidazole carboxylase catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D BMS_1603 putative phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D BMS_2539 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BMS_1608 purH; putative bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BMS_0314 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D BMS_1845 putative membrane-associated 5'-nucleotidase/phosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D BMS_1879 surE; Multifunctional protein surE [Includes: 5'/3'-nucleotidase (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D BMS_1942 gsk; inosine-guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73]
D BMS_2720 punA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D BMS_2876 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BMS_0714 hpt; putative phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D BMS_2523 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BMS_2034 putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BMS_2185 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BMS_3220 conserved hypothetical protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D BMS_2857 xdhA; putative xanthine dehydrogenase K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D BMS_2856 xdhB; putative xanthine dehydrogenase large subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D BMS_2522 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BMS_1461 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D BMS_0491 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D BMS_1694 nrdL; putative ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BMS_1695 nrdM; putative ribonucleoside-diphosphate reductase small chain subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BMS_0492 relA; putative GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BMS_0198 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D BMS_1920 putative exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D BMS_1225 putative transmembrane adenylate/guanylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D BMS_0515 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BMS_3236 putative AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D BMS_2296 ade; Adenine deaminase (Adenase) (Adenine aminase) K01486 ade; adenine deaminase [EC:3.5.4.2]
D BMS_3279 adk; putative adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D BMS_0571 mazG; putative pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
C 00240 Pyrimidine metabolism [PATH:bmx00240]
D BMS_1939 putative carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BMS_1937 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BMS_2627 putative allantoinase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D BMS_2515 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D BMS_1017 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D BMS_1940 pyrF; putative orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D BMS_0231 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D BMS_2185 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BMS_0571 mazG; putative pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D BMS_0695 yceF; Maf-like protein yceF K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D BMS_2534 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D BMS_1907 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D BMS_0073 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D BMS_0599 udk; uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D BMS_1057 putative uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D BMS_0314 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D BMS_1845 putative membrane-associated 5'-nucleotidase/phosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D BMS_1879 surE; Multifunctional protein surE [Includes: 5'/3'-nucleotidase (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D BMS_0598 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D BMS_2719 deoA; pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D BMS_2628 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D BMS_1694 nrdL; putative ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BMS_1695 nrdM; putative ribonucleoside-diphosphate reductase small chain subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D BMS_0533 putative deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D BMS_1830 tmk; putative thymidylate kinase (dTMP kinase) K00943 tmk; dTMP kinase [EC:2.7.4.9]
D BMS_1509 putative deoxyuridine 5'triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BMS_0713 tdk; thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D BMS_1683 thyA; putative thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bmx00250]
D BMS_2649 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_2692 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_3169 nadB; putative L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D BMS_1279 putative L-Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D BMS_0042 asnB; asparagine synthetase B [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BMS_0346 putative amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BMS_2989 putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BMS_2993 putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BMS_1293 ald; putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D BMS_0515 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D BMS_2539 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D BMS_1937 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D BMS_3045 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D BMS_2061 putative proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D BMS_2227 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BMS_1939 putative carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D BMS_1181 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D BMS_1607 purQ; putative phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D BMS_0194 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BMS_1601 purF; putative amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bmx00260]
D BMS_1743 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BMS_2550 lysC; putative lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BMS_1740 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BMS_3035 putative homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D BMS_0732 ltaE; L-allo-threonine aldolase, PLP-dependent K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D BMS_2795 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BMS_0442 putative phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D BMS_3040 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D BMS_2245 putative dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D BMS_2221 putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BMS_1543 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D BMS_1843 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D BMS_3344 gcvT; putative aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_3345 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D BMS_0238 pssA; putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D BMS_3011 putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D BMS_3012 metC; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D BMS_0961 tdcB; threonine dehydratase catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
C 00270 Cysteine and methionine metabolism [PATH:bmx00270]
D BMS_3012 metC; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D BMS_3011 putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D BMS_0311 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D BMS_2937 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D BMS_2130 putative S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D BMS_0856 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D BMS_2131 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D BMS_0056 putative purine nucleoside phosphorylase K00772 mtaP; 5'-methylthioadenosine phosphorylase [EC:2.4.2.28]
D BMS_2876 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D BMS_0197 mtnA; putative methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D BMS_2599 conserved hypothetical protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D BMS_1919 modification methylase (cytosine-specific DNA methylase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BMS_3034 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D BMS_1743 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BMS_2550 lysC; putative lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BMS_1740 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BMS_0610 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2294 dat; putative D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2509 ilvE; putative branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_3010 gshA; putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D BMS_2662 putative glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D BMS_2649 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_2692 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_1465 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D BMS_2245 putative dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D BMS_2221 putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:bmx00280]
D BMS_0610 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2294 dat; putative D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2509 ilvE; putative branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_3181 ldh; putative leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
D BMS_1223 putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D BMS_3178 pdhAB; putative pyruvate (oxoisovalerate) Dehydrogenase, alpha-beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2770 bcd; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D BMS_3396 putative acyl-CoA dehydrogenase K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D BMS_2749 ivd; isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D BMS_3270 putative propionyl-CoA carboxylase K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D BMS_1283 putative lactoylglutathione lyase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D BMS_3249 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BMS_0595 iolA; malonic semialdehyde oxidative decarboxylase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D BMS_1995 accB; carboxyltransferase subunit of acetyl-CoA carboxylase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D BMS_1994 putative enoyl coenzyme A hydratase-like protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D BMS_1991 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D BMS_1983 scoA; succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D BMS_1871 atoD1; acetate CoA-transferase alpha subunit 1 K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D BMS_1982 putative coenzyme A transferase subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D BMS_1872 putative 3-oxoadipate CoA-transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bmx00290]
D BMS_0961 tdcB; threonine dehydratase catabolic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D BMS_0609 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D BMS_0610 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2294 dat; putative D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2509 ilvE; putative branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_3181 ldh; putative leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9]
C 00300 Lysine biosynthesis [PATH:bmx00300]
D BMS_1743 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BMS_2550 lysC; putative lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BMS_1740 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BMS_1745 dapA; dihydrodipicolinate synthase (DHDPS) K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D BMS_1744 putative dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D BMS_1746 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D BMS_3091 dapF; putative diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BMS_1747 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D BMS_2183 lysA; putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D BMS_1042 putative alanine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D BMS_3023 putative alanine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D BMS_0060 murE; probable UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelateligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BMS_0061 murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bmx00310]
D BMS_1042 putative alanine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D BMS_3023 putative alanine dehydrogenase K00290 LYS1; saccharopine dehydrogenase (NAD+, L-lysine forming) [EC:1.5.1.7]
D BMS_2257 odhB; putative dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_0668 conserved hypothetical protein K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D BMS_1706 putative L-lysine 2,3-aminomutase K01843 kamA; lysine 2,3-aminomutase [EC:5.4.3.2]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:bmx00220]
D BMS_1181 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D BMS_1607 purQ; putative phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D BMS_2227 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BMS_3045 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D BMS_2649 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_2692 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00330 Arginine and proline metabolism [PATH:bmx00330]
D BMS_2134 putative arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D BMS_2135 speB; putative agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D BMS_2246 putative agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D BMS_0856 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D BMS_2131 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D BMS_2130 putative S-adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D BMS_3369 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D BMS_3370 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D BMS_1589 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D BMS_1123 putative oxidoreductase K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D BMS_2060 proC; putative pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D BMS_2061 putative proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D BMS_2649 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_2692 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:bmx00340]
D BMS_0360 hisH; Imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D BMS_0361 hisF; imidazole glycerol phosphate synthase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D BMS_0246 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BMS_3420 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D BMS_0979 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D BMS_3421 putative imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D BMS_2192 putative arginase family protein K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:bmx00350]
D BMS_2649 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_2692 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_0246 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BMS_1999 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D BMS_0244 putative homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D BMS_1185 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:bmx00360]
D BMS_2002 putative phenylacetic acid degradation protein K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D BMS_2001 paaG; probable enoyl-CoA hydratase PaaG K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D BMS_1990 paaG; putative enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D BMS_1450 putative betaine aldehyde dehydrogenase K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_2772 hbdA; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D BMS_2649 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_2692 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_0246 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BMS_1999 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D BMS_2832 katY; catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D BMS_2488 katG; putative catalase-peroxidase protein K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00380 Tryptophan metabolism [PATH:bmx00380]
D BMS_0216 putative tryptophan oxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D BMS_2257 odhB; putative dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D BMS_0880 katB; catalase precursor K03781 katE; catalase [EC:1.11.1.6]
D BMS_2832 katY; catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D BMS_2488 katG; putative catalase-peroxidase protein K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bmx00400]
D BMS_3157 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D BMS_0133 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D BMS_2787 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D BMS_3156 aroA; putative 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D BMS_3158 aroC; putative chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D BMS_2691 putative chorismate mutase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D BMS_2649 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_2692 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_0246 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:bmx00410]
D BMS_1542 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D BMS_1870 putative aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D BMS_0602 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D BMS_2770 bcd; acyl-CoA dehydrogenase, short-chain specific K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D BMS_0595 iolA; malonic semialdehyde oxidative decarboxylase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:bmx00430]
D BMS_2383 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D BMS_1293 ald; putative alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D BMS_1870 putative aminotransferase K15372 toa; taurine---2-oxoglutarate transaminase [EC:2.6.1.55]
C 00440 Phosphonate and phosphinate metabolism
D BMS_1294 putative hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:bmx00450]
D BMS_0311 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D BMS_3012 metC; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D BMS_1240 putative aminotransferase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D BMS_3256 putative selenocysteine lyase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D BMS_1486 thioredoxin reductase (NADPH) K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BMS_2461 putative thioredoxin K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BMS_3184 putative thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D BMS_0934 metG; putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bmx00460]
D BMS_2383 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D BMS_1279 putative L-Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D BMS_2795 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bmx00470]
D BMS_2785 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BMS_1867 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BMS_2346 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BMS_1181 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D BMS_1607 purQ; putative phosphoribosylformylglycinamidine synthase 1 K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D BMS_1643 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BMS_0063 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BMS_2225 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BMS_2400 putative mandelate racemase/muconate lactonizing enzyme K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25]
D BMS_3091 dapF; putative diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D BMS_1747 putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D BMS_2183 lysA; putative diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:bmx00480]
D BMS_2383 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D BMS_3010 gshA; putative glutamate-cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D BMS_2662 putative glutathione synthetase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D BMS_0936 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BMS_2969 pepA; putative leucine aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BMS_1212 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D BMS_0738 putative glutathione S transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D BMS_1178 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D BMS_0921 icd; putative isocitrate dehydrogenase K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D BMS_0720 gpo; glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D BMS_1633 conserved hypothetical protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D BMS_0857 putative glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D BMS_1435 putative peroxiredoxin/glutaredoxin family protein K24136 pgdX; glutathione-dependent peroxiredoxin [EC:1.11.1.27]
D BMS_0856 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D BMS_2131 speE; spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:bmx00540]
D BMS_0581 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D BMS_3337 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D BMS_0579 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D BMS_0084 putative metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D BMS_0583 putative lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D BMS_0584 lpxK; putative tetraacyldisaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D BMS_0616 conserved hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D BMS_2533 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D BMS_2532 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D BMS_2535 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BMS_1827 putative membrane protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D BMS_0274 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D BMS_0398 putative phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D BMS_1905 rfaE; putative DP-heptose synthetase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D BMS_1935 putative D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D BMS_0079 putative cytidyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D BMS_2236 rfaD; ADP-L-Glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D BMS_0715 putative sugar kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D BMS_0395 putative kipopolysaccharide biosynthesis protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D BMS_0329 putative membrane protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:bmx00542]
D BMS_0502 putative membrane protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D BMS_0355 putative LPS biosynthesis related glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bmx00541]
D BMS_3412 gtaB; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D BMS_3136 putative UDP-glucose-4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0328 exoB; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0481 putative UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0372 putative epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_3154 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_0369 putative LPS biosynthesis related DNTP-hexose dehydratase-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_1207 wbiG; putative epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D BMS_2956 udg; putative UDP-glucose dehydrogenase (CPS biosynthesis) K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D BMS_0331 rmlA; TDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BMS_0330 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BMS_1315 putative dNTP-hexose dehydratase-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BMS_0371 rfbC; dTDP-D-glucose 4,6-dehydratase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D BMS_0170 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D BMS_0381 putative LPS biosynthesis-related sugar-phosphate nucleotidyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D BMS_0382 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D BMS_0379 rfbH; putative dehydratase RfbH K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D BMS_0380 rfbE; DNTP-hexose dehydratase-epimerase K12454 rfbE; CDP-paratose 2-epimerase [EC:5.1.3.10]
D BMS_2870 pmi; mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D BMS_2540 manC; putative mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D BMS_3122 putative pilin glycosylation protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D BMS_0193 gcaD; putative UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D BMS_0356 possible sugar nucleotide epimerase/dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D BMS_0364 putative polysaccharide biosynthesis protein K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D BMS_0363 neuA; acylneuraminate cytidylyltransferase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D BMS_0344 puttive UDP-glucose/GDP mannose dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D BMS_0345 wbpP; UDP-N-acetylglucosamine C4 epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:bmx00550]
D BMS_0629 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BMS_0066 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BMS_0065 murC; UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase) K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BMS_0063 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BMS_2225 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BMS_0060 murE; probable UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelateligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BMS_1867 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BMS_2346 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BMS_0061 murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BMS_0233 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BMS_1971 uppP; undecaprenyl-diphosphatase (Undecaprenyl pyrophosphate phosphatase) (Bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BMS_0062 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase) K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BMS_0427 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BMS_1930 putative biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D BMS_3348 putative peptidoglycan transglycosylase penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BMS_3408 putative penicillin-binding protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D BMS_2914 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BMS_0059 ftsI; putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BMS_0103 putative penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D BMS_2612 putative peptidoglycan biosynthesis-related K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BMS_2102 putative D-alanyl-D-alanine carboxypeptidase precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BMS_0851 putative membrane protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:bmx00552]
D BMS_1971 uppP; undecaprenyl-diphosphatase (Undecaprenyl pyrophosphate phosphatase) (Bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BMS_0502 putative membrane protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D BMS_0355 putative LPS biosynthesis related glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bmx00543]
D BMS_0502 putative membrane protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D BMS_0355 putative LPS biosynthesis related glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D BMS_1565 putative bi-functional transferase/deacetylase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bmx00730]
D BMS_2410 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_3052 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_2118 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_2409 thiI; thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D BMS_0652 engC; Probable GTPase engC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BMS_1913 phoB; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BMS_2071 hypothetical protein K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D BMS_3279 adk; putative adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:bmx00740]
D BMS_0015 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D BMS_0013 ribD; riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase] K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BMS_0016 ribH; 6,7-dimethyl-8-ribityllumazine synthase (DMRL synthase) (Lumazine synthase) (Riboflavin synthase beta chain) K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D BMS_0014 ribE; riboflavin synthase alpha chain K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D BMS_0117 ribC; riboflavin biosynthesis protein RibC K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D BMS_1127 putative ADP-ribose pyrophosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
C 00750 Vitamin B6 metabolism [PATH:bmx00750]
D BMS_2574 pdxH; pyridoxine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D BMS_2221 putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BMS_2123 pdxJ; pyridoxal phosphate biosynthetic protein K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bmx00760]
D BMS_3169 nadB; putative L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D BMS_3051 nadA; quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D BMS_3170 nadC; putative nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D BMS_2720 punA; purine nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D BMS_0314 putative 5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D BMS_1845 putative membrane-associated 5'-nucleotidase/phosphoesterase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45]
D BMS_1879 surE; Multifunctional protein surE [Includes: 5'/3'-nucleotidase (EC 3.1.3.6) (Nucleoside monophosphate phosphohydrolase); Exopolyphosphatase (EC 3.6.1.11)] K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D BMS_2301 hypothetical protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D BMS_0571 mazG; putative pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D BMS_1312 nadE; NH(3)-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D BMS_1373 npdA; NAD-dependent deacetylase (Regulatory protein SIR2 homolog) K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D BMS_0086 putative inorganic polyphosphate/ATP-NAD kinase (Poly(P)/ATP NAD kinase) K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:bmx00770]
D BMS_0609 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D BMS_0608 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D BMS_0602 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D BMS_0607 hypothetical protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D BMS_0603 coaBC; putative coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D BMS_0571 mazG; putative pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D BMS_2650 coaD; phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D BMS_0570 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D BMS_0610 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2294 dat; putative D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2509 ilvE; putative branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_1542 panD; aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:bmx00780]
D BMS_1444 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BMS_2794 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BMS_0467 probable short chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_1431 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_2792 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_0580 fabZ; (3R)-hydroxymyristol-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BMS_1432 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BMS_1433 putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BMS_2055 fabI; putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BMS_1209 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BMS_3222 putative biotin [acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bmx00785]
D BMS_2608 lipB; lipoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D BMS_2609 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D BMS_1924 lplA; putative lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_0672 pdhC; dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D BMS_2258 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D BMS_2257 odhB; putative dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D BMS_1223 putative 2-oxoisovalerate dehydrogenase, alpha and beta subunits K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D BMS_3178 pdhAB; putative pyruvate (oxoisovalerate) Dehydrogenase, alpha-beta fusion K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D BMS_1843 gcvP; glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D BMS_3344 gcvT; putative aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D BMS_3345 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bmx00790]
D BMS_2630 conserved hypothetical protein K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D BMS_1913 phoB; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BMS_3395 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D BMS_1778 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D BMS_1684 folA; putative dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BMS_1883 putative folylpolyglutamate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D BMS_0015 ribA; GTP cyclohydrolase II K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D BMS_1881 trpG; anthranilate synthase component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D BMS_2709 pabB; putative para-aminobenzoate synthase component I K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D BMS_2613 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D BMS_1625 putative dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D BMS_2203 putative radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D BMS_2513 putative transcriptional regulatory protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D BMS_2143 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D BMS_1165 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D BMS_1166 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D BMS_1407 moeA; putative molybdenum cofactor biosynthesis protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
C 00670 One carbon pool by folate [PATH:bmx00670]
D BMS_1684 folA; putative dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D BMS_3343 folD; folD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D BMS_2795 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D BMS_1608 purH; putative bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BMS_3418 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BMS_0541 putative transferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BMS_3344 gcvT; putative aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D BMS_0311 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D BMS_1683 thyA; putative thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D BMS_0312 metH; putative cystathione beta-lyase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D BMS_3194 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bmx00860]
D BMS_2039 putative glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D BMS_2041 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D BMS_1528 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D BMS_2040 putative porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D BMS_2044 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D BMS_1232 hemF; coproporphyrinogen III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D BMS_2045 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D BMS_0441 putative integral membrane protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D BMS_0218 putative protoheme IX farnesyltransferase (heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141]
D BMS_0217 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D BMS_3378 putative vitamin B12 related cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D BMS_0822 conserved hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D BMS_2140 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bmx00130]
D BMS_1663 ubiE; putative menaquinone biosynthesis methyltransferase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D BMS_1662 menF; putative menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
D BMS_1661 menD; putative menaquinone biosynthesis bifunctional protein K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D BMS_1659 putative synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113]
D BMS_1649 putative AMP-binding hydrolase enzyme K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D BMS_2318 menB; putative naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D BMS_3336 conserved hypothetical protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D BMS_1660 menA; putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase (ec 2.5.1.-) (dhna-octaprenyltransferase) K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D BMS_2819 putative NAD(P)H dehydrogenase K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D BMS_1999 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bmx00900]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1477 mvaA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D BMS_1480 putative mevalonate kinase K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D BMS_1479 mvaD; mevalonate diphosphate decarboxylase K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D BMS_1476 putative isopentenyl-diphosphate delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D BMS_1259 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D BMS_0233 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BMS_2595 putative integral membrane zinc-metalloprotease K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:bmx00907]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D BMS_1991 putative hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D BMS_0336 putative transketolase C-terminal part K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BMS_0337 putative transketolase, thiamine disphosphate-binding subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BMS_1113 putative transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BMS_3150 tkt'; putative 1-deoxy-d-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D BMS_3151 tkt; putative transketolase, thiamine disphosphate-binding N subunit K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
D BMS_1273 putative lipoprotein K21162 sgcE4; enediyne biosynthesis protein E4
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:bmx00523]
D BMS_0331 rmlA; TDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BMS_0330 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BMS_1315 putative dNTP-hexose dehydratase-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BMS_0371 rfbC; dTDP-D-glucose 4,6-dehydratase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D BMS_0170 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D BMS_1662 menF; putative menaquinone-specific isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D BMS_0330 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BMS_1315 putative dNTP-hexose dehydratase-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D BMS_1699 acyII; putative secreted penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D BMS_2072 putative secreted penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:bmx00261]
D BMS_1743 lysC; lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BMS_2550 lysC; putative lysine-sensitive aspartokinase III K00928 lysC; aspartate kinase [EC:2.7.2.4]
D BMS_1740 asd; aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D BMS_1745 dapA; dihydrodipicolinate synthase (DHDPS) K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D BMS_1744 putative dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bmx00521]
D BMS_2512 pgmA; putative phosphomannomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D BMS_0612 suhB; inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D BMS_0331 rmlA; TDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BMS_0330 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BMS_1315 putative dNTP-hexose dehydratase-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BMS_0371 rfbC; dTDP-D-glucose 4,6-dehydratase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D BMS_0170 putative dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:bmx00525]
D BMS_0331 rmlA; TDP-glucose pyrophosphorylase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D BMS_0330 rmlB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D BMS_1315 putative dNTP-hexose dehydratase-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:bmx00401]
D BMS_2649 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_2692 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_0246 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
C 00333 Prodigiosin biosynthesis
D BMS_2791 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BMS_0467 probable short chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_1431 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_2792 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_1433 putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BMS_2055 fabI; putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D BMS_2793 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D BMS_1443 putative acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D BMS_2937 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites [PATH:bmx00997]
D BMS_0525 iucD; putative siderophore biosynthesis protein IucD K03897 iucD; lysine N6-hydroxylase [EC:1.14.13.59]
D BMS_0527 putative siderophore biosynthesis protein IucB K03896 iucB; acetyl CoA:N6-hydroxylysine acetyl transferase [EC:2.3.1.102]
D BMS_0526 iucC; putative siderophore biosynthesis protein IucC K03895 iucC; aerobactin synthase [EC:6.3.2.39]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:bmx00362]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_2772 hbdA; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:bmx00625]
D BMS_1185 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D BMS_0185 aldH; aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D BMS_0860 putative hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation
D BMS_0860 putative hydrolase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation
C 00622 Xylene degradation
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D BMS_0244 putative homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation [PATH:bmx00930]
D BMS_2000 echA8; putative enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D BMS_1821 fadB; fatty acid oxidation complex subunit alpha K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation [PATH:bmx00626]
D BMS_1185 probable alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
D BMS_1931 choD; putative exported cholesterol oxidase K03333 choD; cholesterol oxidase [EC:1.1.3.6]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bmx03020]
D BMS_3310 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BMS_3309 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BMS_3274 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BMS_0148 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bmx03010]
D BMS_0587 rpsA; 30s ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BMS_0229 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BMS_3295 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BMS_2299 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BMS_3283 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BMS_2713 putative 30S ribosomal protein S6 and S18 fusion K02990 RP-S6; small subunit ribosomal protein S6
D BMS_3307 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BMS_3286 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BMS_0142 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BMS_3302 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BMS_3275 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BMS_3308 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BMS_3276 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BMS_3287 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BMS_1507 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BMS_2148 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BMS_3292 rpsQ; putative 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BMS_3297 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BMS_2773 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BMS_0690 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BMS_3314 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BMS_3298 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BMS_3301 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BMS_3300 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BMS_3288 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BMS_3285 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BMS_3312 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BMS_2711 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BMS_3313 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BMS_3315 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BMS_0141 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BMS_3291 rplN; putative 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BMS_3281 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BMS_3294 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BMS_3273 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BMS_3284 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BMS_1894 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BMS_2029 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BMS_2980 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BMS_3296 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BMS_3299 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BMS_3289 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BMS_1098 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BMS_2981 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BMS_1033 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BMS_3293 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BMS_3282 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BMS_1021 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D BMS_2789 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BMS_1023 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BMS_3450 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BMS_2030 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BMS_3277 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BMS_rRNA0001 BMS_rRNA0001 K01985 5SrRNA; 5S ribosomal RNA
D BMS_rRNA0002 BMS_rRNA0002 K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bmx00970]
D BMS_tRNA0005 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BMS_tRNA0014 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BMS_tRNA0003 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BMS_tRNA0013 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BMS_tRNA0022 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BMS_tRNA0035 tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BMS_tRNA0024 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BMS_tRNA0016 tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BMS_tRNA0036 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BMS_tRNA0010 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BMS_tRNA0012 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BMS_tRNA0032 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BMS_tRNA0019 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BMS_tRNA0026 tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D BMS_tRNA0006 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BMS_tRNA0025 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BMS_tRNA0018 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BMS_tRNA0015 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BMS_tRNA0008 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BMS_tRNA0009 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BMS_tRNA0011 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BMS_tRNA0027 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D BMS_tRNA0007 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D BMS_tRNA0017 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D BMS_tRNA0020 tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BMS_tRNA0029 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BMS_tRNA0028 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BMS_tRNA0001 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BMS_tRNA0002 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BMS_tRNA0004 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BMS_tRNA0034 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BMS_tRNA0031 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BMS_tRNA0030 tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BMS_tRNA0033 tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BMS_tRNA0023 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D BMS_tRNA0021 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D BMS_1201 gltX; Glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D BMS_1200 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BMS_0445 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BMS_2682 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BMS_1835 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BMS_2944 glyQS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BMS_1866 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BMS_2447 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BMS_2626 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BMS_0934 metG; putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BMS_3418 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BMS_0541 putative transferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D BMS_0250 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BMS_2339 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BMS_0693 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BMS_1670 lysS; Lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D BMS_1250 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BMS_3324 proS; proline tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BMS_0446 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BMS_1903 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BMS_1902 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BMS_1202 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BMS_2994 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bmx03060]
D BMS_3280 secY; putative preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D BMS_3317 putative preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE
D BMS_2886 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D BMS_1572 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D BMS_1573 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D BMS_1570 putative preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D BMS_3448 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BMS_1492 secA; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BMS_2155 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BMS_3196 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D BMS_1571 putative secreted protein K03116 tatA; sec-independent protein translocase protein TatA
D BMS_2144 tatA; putative Sec-independent protein translocase protein tatA/E homolog K03116 tatA; sec-independent protein translocase protein TatA
D BMS_2240 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D BMS_0286 lepB; signal peptidase I (leader peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BMS_0104 sipS; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BMS_3381 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D BMS_3143 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bmx04122]
D BMS_2410 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_3052 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_2118 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_1915 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BMS_1917 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BMS_1165 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D BMS_1167 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D BMS_1168 putative molybdopterin converting factor K21147 moeZR; sulfur-carrier protein adenylyltransferase/sulfurtransferase [EC:2.7.7.80 2.7.7.- 2.8.1.11 2.8.1.-]
D BMS_1166 moaC; Molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D BMS_2409 thiI; thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:bmx03018]
D BMS_1644 eno; putative Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BMS_1508 pnpA; putative polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BMS_0947 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D BMS_0967 putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D BMS_0424 putative RNA helicase dead-box protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BMS_1370 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BMS_0896 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BMS_0626 rho; putative transcription termination factor rho K03628 rho; transcription termination factor Rho
D BMS_3193 putative phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BMS_0072 putative beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D BMS_3041 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BMS_3243 dnaK; Chaperone protein dnaK (HSP70) K04043 dnaK; molecular chaperone DnaK
D BMS_0281 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bmx03030]
D BMS_2721 putative DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_1335 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_0670 putative DNA polymerase III PolC-type alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_2518 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BMS_0050 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BMS_1831 putative DNA polymerase-related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BMS_0002 dnaN; putative DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BMS_2710 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BMS_0405 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BMS_2893 ssb; putative single strand binding protein K03111 ssb; single-strand DNA-binding protein
D BMS_1852 rnhA; ribonuclease H (RNase H) K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BMS_1893 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BMS_0277 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BMS_3428 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bmx03410]
D BMS_2607 putative endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BMS_2321 ung; uracil-DNA glycosylase (UDG) K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BMS_3163 mutY; putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BMS_1134 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D BMS_2830 tag; putative DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D BMS_0958 exoA; putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BMS_3385 putative endonuclease K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D BMS_0277 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BMS_0657 putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BMS_3428 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bmx03420]
D BMS_0023 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BMS_0019 uvrA; UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) K03701 uvrA; excinuclease ABC subunit A
D BMS_0143 putative excinuclease ABC subunit K03701 uvrA; excinuclease ABC subunit A
D BMS_2182 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D BMS_0546 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D BMS_0195 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BMS_1986 rep; Rep helicase, a single-stranded DNA-dependent ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BMS_0277 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BMS_3428 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:bmx03430]
D BMS_2677 mutS; putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BMS_0105 putative DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D BMS_2754 mutL; putative DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D BMS_0195 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BMS_1986 rep; Rep helicase, a single-stranded DNA-dependent ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BMS_2723 xseA; putative exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D BMS_3350 xseB; putative exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D BMS_0657 putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BMS_2893 ssb; putative single strand binding protein K03111 ssb; single-strand DNA-binding protein
D BMS_2518 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BMS_0002 dnaN; putative DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BMS_0050 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BMS_1831 putative DNA polymerase-related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BMS_2721 putative DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_1335 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_0670 putative DNA polymerase III PolC-type alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_3428 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:bmx03440]
D BMS_0657 putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BMS_2893 ssb; putative single strand binding protein K03111 ssb; single-strand DNA-binding protein
D BMS_0003 putative DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BMS_0052 recR; recombination protein K06187 recR; recombination protein RecR
D BMS_0155 recA; recombinase A K03553 recA; recombination protein RecA
D BMS_0277 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BMS_3340 ruvA; holliday junction DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D BMS_3339 ruvB; holliday junction DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BMS_3341 ruvC; putative crossover Holliday junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BMS_0161 putative ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BMS_2518 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BMS_0002 dnaN; putative DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BMS_0050 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BMS_1831 putative DNA polymerase-related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BMS_2721 putative DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_1335 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_0670 putative DNA polymerase III PolC-type alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_2625 putative primosomal protein n'(replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:bmx03250]
D BMS_0656 ppiA; probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BMS_2435 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bmx02010]
D BMS_0510 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D BMS_0511 modB; molybdenum transport system permease protein K02018 modB; molybdate transport system permease protein
D BMS_0512 modC; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D BMS_0225 putative iron-uptake ABC transport system periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D BMS_2781 putative membrane protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D BMS_2783 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D BMS_2782 putative ABC transport ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D BMS_1118 putative D-ribose-binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D BMS_2384 pstS; phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D BMS_2385 pstC; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D BMS_2386 pstA; phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D BMS_2387 pstB; phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BMS_1959 putative lipoprotein K02044 phnD; phosphonate transport system substrate-binding protein
D BMS_1961 putative binding-protein-dependent transport system membrane component K02042 phnE; phosphonate transport system permease protein
D BMS_1960 putative ABC transport ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D BMS_1317 aapJ; General L-amino acid substrate binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D BMS_1680 putative extracellular ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D BMS_1679 putative transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D BMS_1678 putative transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D BMS_1677 putative transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D BMS_1676 putative ATP-binding ABC transporter protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D BMS_2374 dppA; periplasmic dipeptide transport protein precursor K12368 dppA; dipeptide transport system substrate-binding protein
D BMS_2375 dppB; putative dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D BMS_2376 dppC; putative didpeptide permease component of ABC transporter K12370 dppC; dipeptide transport system permease protein
D BMS_2377 dppD; putative dipeptide ABC transporter component K12371 dppD; dipeptide transport system ATP-binding protein
D BMS_2378 dppF; dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D BMS_0300 ABC transport system, substrate-binding lipoprotein K13893 yejA; microcin C transport system substrate-binding protein
D BMS_0301 putative ABC transport system, membrane protein K13894 yejB; microcin C transport system permease protein
D BMS_0302 putative ABC transport system, membrane protein K13895 yejE; microcin C transport system permease protein
D BMS_3142 putative polysaccharide export ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D BMS_1820 putative membrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BMS_0576 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BMS_2967 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D BMS_3415 putative transport-related membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D BMS_2675 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BMS_2727 putative putrescine transport ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D BMS_2945 putative ABC transport system, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D BMS_1923 putative ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D BMS_2506 putative ABC transport system, membrane protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D BMS_1922 putative ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D BMS_2505 putative ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:bmx03070]
D BMS_2839 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BMS_1270 putative general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D BMS_1268 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D BMS_1267 gspG; putative general secretion pathway export protein G K02456 gspG; general secretion pathway protein G
D BMS_1262 putative membrane protein K02461 gspL; general secretion pathway protein L
D BMS_1572 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D BMS_1573 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D BMS_3317 putative preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE
D BMS_2886 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D BMS_3280 secY; putative preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D BMS_1570 putative preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D BMS_3448 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BMS_1492 secA; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BMS_3196 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D BMS_2155 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BMS_1571 putative secreted protein K03116 tatA; sec-independent protein translocase protein TatA
D BMS_2144 tatA; putative Sec-independent protein translocase protein tatA/E homolog K03116 tatA; sec-independent protein translocase protein TatA
D BMS_2240 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D BMS_2549 putative TadA-like protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bmx02020]
D BMS_2390 two-component sensor kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BMS_2057 putative sensor kinase protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BMS_2389 phoB; phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D BMS_0431 putative positive response regulator for pho regulon, sensor is PhoR (or CreC) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D BMS_2056 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D BMS_1913 phoB; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BMS_2384 pstS; phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D BMS_1765 putative metal transport-related, exported protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D BMS_1764 putative cation efflux system protein K07787 cusA; copper/silver efflux system protein
D BMS_0081 fliC1; putative flagellin FliC K02406 fliC; flagellin
D BMS_0082 fliC2; fliC2 K02406 fliC; flagellin
D BMS_0168 fliC3; flagellin subunit K02406 fliC; flagellin
D BMS_0169 fliC4; flagellin subunit K02406 fliC; flagellin
D BMS_2167 fliC5; putative flagellin subunit K02406 fliC; flagellin
D BMS_0566 RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D BMS_2700 motA; putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D BMS_0217 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D BMS_0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D BMS_1376 putative chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BMS_0403 putative two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D BMS_0851 putative membrane protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BMS_2990 putative UDP-glucose 6-dehydrogenase K00066 algD; GDP-mannose 6-dehydrogenase [EC:1.1.1.132]
D BMS_3361 csrA; carbon storage regulator homolog K03563 csrA; carbon storage regulator
D BMS_2826 putative two-component system response regulator K11624 ydfI; two-component system, NarL family, response regulator YdfI
D BMS_1598 p pilus assembly protein, chaperone papd. p pilus assembly protein, chaperone papd K07346 fimC; fimbrial chaperone protein
D BMS_0172 putative pilus-related subunit K02651 flp; pilus assembly protein Flp/PilA
D BMS_0178 cpaB; putative pilus assembly-related protein K02279 cpaB; pilus assembly protein CpaB
D BMS_0179 cpaC; putative pilus assembly-related protein K02280 cpaC; pilus assembly protein CpaC
D BMS_0180 tadA; putative pilus assembly-related protein K02282 cpaE; pilus assembly protein CpaE
D BMS_1635 cpaF; putative tight adherance flp pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D BMS_1415 putative bacterial secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D BMS_0181 tadB; putative pilus assembly-related protein K12510 tadB; tight adherence protein B
D BMS_3229 putative membrane protein K12511 tadC; tight adherence protein C
D BMS_2227 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BMS_2731 putative response regulator in two-component regulatory system K02584 nifA; Nif-specific regulatory protein
D BMS_3382 ntrC; nitrogen regulation protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D BMS_2128 putative transcriptional regulatory protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D BMS_3201 putative response regulator in two-component regulatory system K07714 atoC; two-component system, NtrC family, response regulator AtoC
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2674 rpoN; RNA polymerase sigma-54 factor (sigma-N) K03092 rpoN; RNA polymerase sigma-54 factor
D BMS_0122 pilE; pilin K02650 pilA; type IV pilus assembly protein PilA
D BMS_1080 cheR; putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BMS_2633 putative chemotactic response, glutamate methyltransferase fusion protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BMS_0294 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1182 putative methyl-accepting chemotaxis citrate transducer K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1079 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1091 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1224 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_2634 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_3330 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1082 cheW; putative chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D BMS_2636 cheW; positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW
D BMS_2637 cheA; chemotaxis two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BMS_2364 putative regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_0188 cheY; chemotaxis protein cheY homologue K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_1535 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2170 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2846 putative chemotaxis protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2347 putative chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2062 putative two-component system, response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2632 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BMS_0504 putative two-component system, response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D BMS_2530 conserved hypothetical protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D BMS_0702 putative C4-dicarboxylate transporter, large subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D BMS_3366 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_1467 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_0199 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_1538 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_2764 conserved hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_1181 glsA; glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D BMS_0680 putative two component system, histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D BMS_0681 putative two-component response regulator transcriptional regulatory protein K15012 regA; two-component system, response regulator RegA
D BMS_1401 putative cytochrome C oxidase subunit K15862 ccoNO; cytochrome c oxidase cbb3-type subunit I/II [EC:7.1.1.9]
D BMS_1399 putative cytochrome c K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D BMS_2839 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BMS_2805 putative low molecular weight protein-tyrosine-phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D BMS_2866 putative histidine kinase/response regulator fusion protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D BMS_3357 flgM; putative flagella-related protein K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bmx02024]
D BMS_2530 conserved hypothetical protein K10910 luxP; autoinducer 2-binding periplasmic protein LuxP
D BMS_1680 putative extracellular ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D BMS_1679 putative transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D BMS_1678 putative transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D BMS_1677 putative transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D BMS_1676 putative ATP-binding ABC transporter protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D BMS_1619 putative hemagglutinin/hemolysin protein K20276 bapA; large repetitive protein
D BMS_0149 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BMS_2863 fadD; long-chain-fatty-acid--CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BMS_3366 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_1467 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_0199 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_1538 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_2764 conserved hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_0013 ribD; riboflavin biosynthesis protein [includes: diaminohydroxyphosphoribosylaminopyrimidine deaminase and 5-amino-6-(5-phosphoribosylamino)uracil reductase] K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D BMS_1093 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D BMS_0075 putative periplasmic substrate-binding transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BMS_3174 putative peptide-binding exported protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BMS_0153 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BMS_3003 putative ABC transport system solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BMS_3002 putative ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BMS_3232 oppB_1; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BMS_3231 putative dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BMS_3001 putative oligopeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BMS_0503 putative ATP-binding component of ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BMS_3448 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BMS_2026 conserved hypothetical protein K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D BMS_1772 putative serine metalloprotease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D BMS_3317 putative preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE
D BMS_2886 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D BMS_3280 secY; putative preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D BMS_1570 putative preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D BMS_1492 secA; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BMS_3196 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D BMS_2155 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bmx02030]
D BMS_0294 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1182 putative methyl-accepting chemotaxis citrate transducer K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1079 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1091 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1224 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_2634 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_3330 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1118 putative D-ribose-binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D BMS_2374 dppA; periplasmic dipeptide transport protein precursor K12368 dppA; dipeptide transport system substrate-binding protein
D BMS_2637 cheA; chemotaxis two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BMS_1082 cheW; putative chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D BMS_2636 cheW; positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW
D BMS_2364 putative regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_0188 cheY; chemotaxis protein cheY homologue K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_1535 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2170 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2846 putative chemotaxis protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2347 putative chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2062 putative two-component system, response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2172 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D BMS_2632 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BMS_1081 cheD; putative methylation of MCP proteins-related protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D BMS_1080 cheR; putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BMS_2633 putative chemotactic response, glutamate methyltransferase fusion protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BMS_2928 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D BMS_0556 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D BMS_0557 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D BMS_2700 motA; putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D BMS_2699 motB; putative sodium-driven polar flagellar protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bmx02040]
D BMS_2930 fliE; flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D BMS_2929 fliF; flagellar basal-body M-ring protein K02409 fliF; flagellar M-ring protein FliF
D BMS_2928 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D BMS_2927 fliH; putative flagellar assembly-related protein K02411 fliH; flagellar assembly protein FliH
D BMS_2926 fliI; putative flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D BMS_2925 hypothetical protein K02413 fliJ; flagellar protein FliJ
D BMS_0555 fliL; putative flagellar protein K02415 fliL; flagellar protein FliL
D BMS_1286 putative flagellar transmembrane protein K02415 fliL; flagellar protein FliL
D BMS_0556 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D BMS_0557 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D BMS_0559 fliP; flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D BMS_0560 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D BMS_0561 fliR; putative flagellar export protein K02421 fliR; flagellar biosynthesis protein FliR
D BMS_0563 flhA; putative flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D BMS_0562 flhB; flagellar biosynthetic protein K02401 flhB; flagellar biosynthesis protein FlhB
D BMS_2932 flgB; flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D BMS_2931 flgC; flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D BMS_2922 putative basal-body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D BMS_1525 putative flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D BMS_2920 flgE; putative flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D BMS_3351 flgG2; putative flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D BMS_3352 flgG; flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D BMS_3354 hypothetical protein K02393 flgH; flagellar L-ring protein FlgH
D BMS_3355 flgI; Flagellar P-ring protein precursor (Basal body P-ring protein) K02394 flgI; flagellar P-ring protein FlgI
D BMS_3359 flgK; putative flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D BMS_3360 flgL; putative flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D BMS_0081 fliC1; putative flagellin FliC K02406 fliC; flagellin
D BMS_0082 fliC2; fliC2 K02406 fliC; flagellin
D BMS_0168 fliC3; flagellin subunit K02406 fliC; flagellin
D BMS_0169 fliC4; flagellin subunit K02406 fliC; flagellin
D BMS_2167 fliC5; putative flagellin subunit K02406 fliC; flagellin
D BMS_0096 putative flagellar hook associated protein K02407 fliD; flagellar hook-associated protein 2
D BMS_0095 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D BMS_2700 motA; putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D BMS_2699 motB; putative sodium-driven polar flagellar protein K02557 motB; chemotaxis protein MotB
D BMS_3357 flgM; putative flagella-related protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D BMS_0404 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D BMS_2674 rpoN; RNA polymerase sigma-54 factor (sigma-N) K03092 rpoN; RNA polymerase sigma-54 factor
D BMS_0566 RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D BMS_1644 eno; putative Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:bmx04980]
D BMS_3378 putative vitamin B12 related cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D BMS_3250 putative transport system kinase K07588 MMAA; GTPase [EC:3.6.5.-]
D BMS_3249 mutB; putative methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D BMS_0311 metH; B12-dependent homocysteine-N5-methyltetrahydrofolate transmethylase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bmx01501]
D BMS_2465 putative sugar hydrolase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BMS_3230 nagZ; beta-hexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D BMS_0453 probable membrane protein K18138 acrB; multidrug efflux pump
D BMS_2839 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BMS_3348 putative peptidoglycan transglycosylase penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BMS_2914 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BMS_0059 ftsI; putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:bmx01502]
D BMS_0403 putative two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D BMS_1867 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BMS_2346 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BMS_2785 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BMS_0061 murF; putative UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D BMS_0062 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase) K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BMS_0427 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BMS_0851 putative membrane protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bmx01503]
D BMS_0656 ppiA; probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BMS_2435 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BMS_0453 probable membrane protein K18138 acrB; multidrug efflux pump
D BMS_2839 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BMS_0581 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bmx01000]
C 01001 Protein kinases [BR:bmx01001]
D BMS_2759 putative serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D BMS_2390 two-component sensor kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BMS_2057 putative sensor kinase protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BMS_0088 putative two-component sensor kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D BMS_2637 cheA; chemotaxis two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BMS_0680 putative two component system, histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D BMS_2866 putative histidine kinase/response regulator fusion protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D BMS_1309 putative two component system histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bmx01009]
D BMS_3034 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D BMS_3041 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BMS_1278 htpG; chaperone protein (heat shock protein) K04079 HSP90A; molecular chaperone HtpG
D BMS_3224 putive phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D BMS_1499 stp; serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D BMS_1543 putative phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:bmx01002]
D BMS_3381 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D BMS_0126 pilD; putative type IV prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D BMS_0174 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D BMS_0945 pcp; pyrrolidone-carboxylate peptidase K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3]
D BMS_2522 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D BMS_1601 purF; putative amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D BMS_0194 glmS; L-glutamine:D-fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D BMS_0042 asnB; asparagine synthetase B [glutamine-hydrolyzing] K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BMS_0346 putative amidotransferase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BMS_2989 putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BMS_2993 putative asparagine synthetase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D BMS_0458 hypothetical protein K07052 K07052; CAAX protease family protein
D BMS_1212 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D BMS_3024 dcp; putative peptidyl-dipeptidase K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5]
D BMS_0687 putative peptidase K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D BMS_0472 putative endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D BMS_0983 putative exported carboxypeptidase K05996 cpt; carboxypeptidase T [EC:3.4.17.18]
D BMS_0851 putative membrane protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BMS_1296 putative zinc protease-like protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D BMS_3247 putative peptidase K07263 pqqL; zinc protease [EC:3.4.24.-]
D BMS_1295 putative zinc protease K07263 pqqL; zinc protease [EC:3.4.24.-]
D BMS_0936 putative aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BMS_2969 pepA; putative leucine aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D BMS_0848 putative peptidase K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D BMS_2243 map; methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D BMS_1666 pepP; putative proline specific aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D BMS_2224 putative peptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D BMS_3021 putative aminopeptidase K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D BMS_1779 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BMS_2595 putative integral membrane zinc-metalloprotease K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D BMS_1713 htpX; Probable heat shock protein htpX protease K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D BMS_0235 rseP; putative transmembane regulator of protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D BMS_1586 putative penicillin-insensitive murein exported endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D BMS_2026 conserved hypothetical protein K01318 sspA; glutamyl endopeptidase [EC:3.4.21.19]
D BMS_1411 putative serine metalloprotease precursor K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D BMS_2097 putative serine metalloprotease precursor K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D BMS_1331 putative serine metalloprotease precursor K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D BMS_1772 putative serine metalloprotease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D BMS_0423 ptrB; oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D BMS_2612 putative peptidoglycan biosynthesis-related K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BMS_2102 putative D-alanyl-D-alanine carboxypeptidase precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BMS_2641 clpP; ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp) K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D BMS_0192 lon; ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BMS_0147 lon; lon ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BMS_2639 lon; putative ATP-dependent protease K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D BMS_1651 dinR; DNA damage-inducible lexA repressor (SOS regulatory protein) K01356 lexA; repressor LexA [EC:3.4.21.88]
D BMS_1795 umuD; SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D BMS_0286 lepB; signal peptidase I (leader peptidase I) K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BMS_0104 sipS; putative signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D BMS_3143 hypothetical protein K13280 SEC11; signal peptidase I [EC:3.4.21.89]
D BMS_2408 prc; carboxy-terminal protease for penicillin-binding protein 3 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D BMS_2724 putative carboxy-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D BMS_2411 putative protease K08676 tri; tricorn protease [EC:3.4.21.-]
D BMS_1699 acyII; putative secreted penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D BMS_2072 putative secreted penicillin acylase K01434 pac; penicillin G amidase [EC:3.5.1.11]
D BMS_2740 putative protease K04773 sppA; protease IV [EC:3.4.21.-]
D BMS_2430 putative peptidase K05995 pepE; dipeptidase E [EC:3.4.13.21]
D BMS_1248 glpG; probable membrane protein K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105]
D BMS_2821 putative microcin immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D BMS_2383 ggt; gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D BMS_1469 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D BMS_1470 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D BMS_2357 putative protease K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D BMS_1710 putative regulatory protease K03592 pmbA; PmbA protein
D BMS_1711 putative peptidase, modulator of DNA gyrase K03568 tldD; TldD protein
D BMS_3266 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D BMS_3267 hflK; putative membrane protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:bmx01003]
D BMS_0390 putative glycosyl transferase K00729 ALG5; dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117]
D BMS_0378 putative glycosyl transferase protein K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D BMS_3030 putative glycosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D BMS_3129 putative membrane protein K23424 TMTC; protein O-mannosyl-transferase [EC:2.4.1.-]
D BMS_0387 putative membrane protein K05286 PIGB; GPI mannosyltransferase 3 [EC:2.4.1.-]
D BMS_0392 putative transferase membrane protein K05286 PIGB; GPI mannosyltransferase 3 [EC:2.4.1.-]
D BMS_0318 putative membrane protein K05286 PIGB; GPI mannosyltransferase 3 [EC:2.4.1.-]
D BMS_1930 putative biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D BMS_3408 putative penicillin-binding protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D BMS_3348 putative peptidoglycan transglycosylase penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BMS_0502 putative membrane protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D BMS_0355 putative LPS biosynthesis related glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D BMS_1565 putative bi-functional transferase/deacetylase K11936 pgaC; poly-beta-1,6-N-acetyl-D-glucosamine synthase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bmx01005]
D BMS_0581 lpxA; acyl-[acyl-carrier-protein]--UDP-N-acetylglucos amine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D BMS_0583 putative lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D BMS_3337 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D BMS_0579 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D BMS_0084 putative metallophosphoesterase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D BMS_0584 lpxK; putative tetraacyldisaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D BMS_1827 putative membrane protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D BMS_2533 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D BMS_2535 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D BMS_2532 conserved hypothetical protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D BMS_0616 conserved hypothetical protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D BMS_1905 rfaE; putative DP-heptose synthetase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D BMS_0079 putative cytidyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D BMS_0395 putative kipopolysaccharide biosynthesis protein K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D BMS_0329 putative membrane protein K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D BMS_0274 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D BMS_0398 putative phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D BMS_1935 putative D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D BMS_2236 rfaD; ADP-L-Glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D BMS_0335 probable glycosyl transferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D BMS_0502 putative membrane protein K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D BMS_0355 putative LPS biosynthesis related glycosyltransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bmx01011]
D BMS_0629 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D BMS_0066 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D BMS_0065 murC; UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase) K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D BMS_0063 murD; putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BMS_2225 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D BMS_0060 murE; probable UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelateligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D BMS_1867 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BMS_2346 putative D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D BMS_2785 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D BMS_1643 murI; putative glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D BMS_2821 putative microcin immunity protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D BMS_0062 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase (UDP-MurNAc-pentapeptide phosphotransferase) K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D BMS_0427 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(penta peptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D BMS_1971 uppP; undecaprenyl-diphosphatase (Undecaprenyl pyrophosphate phosphatase) (Bacitracin resistance protein) K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D BMS_0537 putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D BMS_3348 putative peptidoglycan transglycosylase penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D BMS_3408 putative penicillin-binding protein K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4]
D BMS_2914 penicillin-binding protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D BMS_0059 ftsI; putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BMS_0103 putative penicillin-binding protein K05364 pbpA; penicillin-binding protein A
D BMS_2612 putative peptidoglycan biosynthesis-related K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BMS_2102 putative D-alanyl-D-alanine carboxypeptidase precursor K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D BMS_1930 putative biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D BMS_0851 putative membrane protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BMS_1586 putative penicillin-insensitive murein exported endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-]
D BMS_3404 putative soluble lytic murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D BMS_3205 putative transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D BMS_2397 putative membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D BMS_2974 putative membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D BMS_3432 putative membrane bound murein transglycosylase K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D BMS_0624 putative exported aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D BMS_0549 putative exported protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
C 01004 Lipid biosynthesis proteins [BR:bmx01004]
D BMS_2791 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D BMS_1327 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BMS_2790 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III (Beta-ketoacyl-ACP synthase III) (KAS III) K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D BMS_1444 putative 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BMS_2794 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D BMS_0467 probable short chain dehydrogenase/reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_1431 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_2792 fabG; 3-oxoacyl-[acyl-carrier protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D BMS_0580 fabZ; (3R)-hydroxymyristol-[acyl carrier protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BMS_1432 fabZ; (3R)-hydroxymyristol acyl carrier protein dehydrase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D BMS_1433 putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BMS_2055 fabI; putative enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D BMS_1717 putative 2-nitropropane dioxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D BMS_1350 putative acyl-CoA thioesterase precursor K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D BMS_1356 yciA; putative acyl-coA hydrolase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D BMS_2421 putative inner membrane fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D BMS_0949 putative hydroxylase K04712 DEGS; sphingolipid 4-desaturase/C4-monooxygenase [EC:1.14.19.17 1.14.18.5]
D BMS_0987 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D BMS_0149 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BMS_2863 fadD; long-chain-fatty-acid--CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BMS_2033 putative glycerol-3-phosphate acyltransferase K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]
D BMS_1700 putative acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bmx01008]
D BMS_1273 putative lipoprotein K21162 sgcE4; enediyne biosynthesis protein E4
C 01006 Prenyltransferases [BR:bmx01006]
D BMS_1259 ispA; geranyltranstransferase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D BMS_0233 uppS; undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D BMS_2755 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BMS_1660 menA; putative 1,4-dihydroxy-2-naphthoate octaprenyltransferase (ec 2.5.1.-) (dhna-octaprenyltransferase) K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D BMS_0218 putative protoheme IX farnesyltransferase (heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bmx01007]
D BMS_1670 lysS; Lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D BMS_1200 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BMS_1201 gltX; Glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D BMS_1202 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BMS_2994 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BMS_2626 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BMS_1250 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BMS_0934 metG; putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BMS_0693 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BMS_0250 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BMS_2339 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BMS_2682 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BMS_1835 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BMS_0446 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BMS_2944 glyQS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BMS_2447 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BMS_3324 proS; proline tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BMS_1866 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BMS_0445 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BMS_1903 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BMS_1902 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BMS_2649 putative aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_2692 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D BMS_1675 putative PLP-dependent aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D BMS_0246 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D BMS_1209 putative 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D BMS_2041 hemL; glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D BMS_0610 putative aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2294 dat; putative D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2509 ilvE; putative branched-chain amino acid transaminase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D BMS_2221 putative phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D BMS_3122 putative pilin glycosylation protein K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bmx00194]
D BMS_0207 putative ubiquinol-cytochrome C reductase iron-sulfur subunit K02636 petC; cytochrome b6-f complex iron-sulfur subunit [EC:7.1.1.6]
D BMS_3434 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D BMS_3435 atpD; ATP synthase beta chain K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D BMS_3436 atpG; putative ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D BMS_3437 atpA; ATP synthase F1 sector alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D BMS_3438 putative ATP synthase delta chain K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D BMS_3439 putative ATP synthase B chain K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BMS_3440 putative ATP synthase subunit B' K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D BMS_0010 atpE; ATP synthase C chain (lipid-binding protein) (dicyclohexylcarbodiimide-binding protein) K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D BMS_0009 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bmx03000]
D BMS_1919 modification methylase (cytosine-specific DNA methylase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BMS_0507 putative LysR-family transcriptional regulator K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D BMS_0499 oxyR; redox-sensitive transcriptional activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D BMS_0809 putative LysR-family regulatory protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D BMS_0840 putative LysR-family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D BMS_1020 putative LysR-family regulatory protein K21959 ftsR; LysR family transcriptional regulator, cell division regulator
D BMS_0817 putative TetR-family regulatory protein K19736 aefR; TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
D BMS_0864 putative TetR family reulatory protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D BMS_0043 AsnC-family transcriptional regulator K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D BMS_3070 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BMS_1632 putative MarR family transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D BMS_0468 putative transcriptional regulator K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR
D BMS_1007 putative MerR-family regulatory protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D BMS_1319 putative MerR-family transcriptional regulator K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D BMS_2614 putative MerR-family regulatory protein K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D BMS_2333 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D BMS_3366 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_1467 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_0199 putative transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_1538 putative cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_2764 conserved hypothetical protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D BMS_2119 putative DNA-binding protein K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D BMS_2486 conserved hypothetical protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D BMS_3027 putative iron-dependent regulatory protein K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D BMS_3222 putative biotin [acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D BMS_2731 putative response regulator in two-component regulatory system K02584 nifA; Nif-specific regulatory protein
D BMS_2061 putative proline dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D BMS_0952 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D BMS_1452 putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BMS_3442 putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BMS_3047 putative chromosome segregation protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BMS_2184 putative transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D BMS_1055 putative transcriptional regulator K07734 paiB; transcriptional regulator
D BMS_0622 dksA; putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D BMS_1856 dksA/traR C4-type zinc finger family protein K06204 dksA; RNA polymerase-binding transcription factor
D BMS_2210 putative DnaK suppressor family protein K06204 dksA; RNA polymerase-binding transcription factor
D BMS_1274 putative DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor
D BMS_2798 conserved hypothetical protein K07738 nrdR; transcriptional repressor NrdR
C 03021 Transcription machinery [BR:bmx03021]
D BMS_3274 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BMS_3310 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BMS_3309 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BMS_0148 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BMS_0404 rpoD; RNA polymerase sigma-70 factor K03086 rpoD; RNA polymerase primary sigma factor
D BMS_1506 rpoH; RNA polymerase sigma-32 factor K03089 rpoH; RNA polymerase sigma-32 factor
D BMS_2674 rpoN; RNA polymerase sigma-54 factor (sigma-N) K03092 rpoN; RNA polymerase sigma-54 factor
D BMS_0566 RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D BMS_2439 hepA; RNA polymerase associated protein K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-]
D BMS_1861 nusA; transcription pausing; L factor K02600 nusA; transcription termination/antitermination protein NusA
D BMS_2799 putative N utilisation protein K03625 nusB; transcription antitermination protein NusB
D BMS_3316 nusG; putative transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D BMS_2446 putative two-component response regulator K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D BMS_2850 putative two-component system, sensor kinase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D BMS_1890 putative anit sigma factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D BMS_0622 dksA; putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D BMS_1856 dksA/traR C4-type zinc finger family protein K06204 dksA; RNA polymerase-binding transcription factor
D BMS_2210 putative DnaK suppressor family protein K06204 dksA; RNA polymerase-binding transcription factor
D BMS_1274 putative DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor
D BMS_0162 greA; transcription elongation factor greA K03624 greA; transcription elongation factor GreA
D BMS_2804 greA; transcription elongation factor K04760 greB; transcription elongation factor GreB
D BMS_0626 rho; putative transcription termination factor rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bmx03019]
D BMS_2716 rng; RNase G K08301 rng; ribonuclease G [EC:3.1.26.-]
D BMS_2016 rnc; Ribonuclease III (RNase III) K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BMS_0072 putative beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D BMS_3193 putative phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D BMS_0947 rhlE; putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D BMS_0967 putative ATP-dependent RNA helicase K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D BMS_0424 putative RNA helicase dead-box protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BMS_1370 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BMS_0896 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BMS_1644 eno; putative Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BMS_1508 pnpA; putative polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D BMS_0626 rho; putative transcription termination factor rho K03628 rho; transcription termination factor Rho
D BMS_3041 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D BMS_3243 dnaK; Chaperone protein dnaK (HSP70) K04043 dnaK; molecular chaperone DnaK
D BMS_0281 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BMS_3361 csrA; carbon storage regulator homolog K03563 csrA; carbon storage regulator
C 03041 Spliceosome [BR:bmx03041]
C 03011 Ribosome [BR:bmx03011]
D BMS_0587 rpsA; 30s ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D BMS_0229 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D BMS_3295 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D BMS_2299 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D BMS_3283 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D BMS_2713 putative 30S ribosomal protein S6 and S18 fusion K02990 RP-S6; small subunit ribosomal protein S6
D BMS_3307 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D BMS_3286 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D BMS_0142 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D BMS_3302 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D BMS_3275 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D BMS_3308 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D BMS_3276 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D BMS_3287 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D BMS_1507 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D BMS_2148 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D BMS_3292 rpsQ; putative 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D BMS_3297 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D BMS_2773 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D BMS_0690 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D BMS_3314 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D BMS_3298 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D BMS_3301 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D BMS_3300 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D BMS_3288 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D BMS_3285 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D BMS_2711 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D BMS_3313 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D BMS_3315 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D BMS_3312 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D BMS_0141 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D BMS_3291 rplN; putative 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D BMS_3281 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D BMS_3294 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D BMS_3273 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D BMS_3284 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D BMS_1894 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D BMS_2029 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D BMS_2980 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D BMS_3296 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D BMS_3299 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D BMS_3289 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D BMS_2981 rpmA; 50S ribosomal subunit protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D BMS_1033 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D BMS_3293 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D BMS_3282 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D BMS_1021 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D BMS_2789 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D BMS_1023 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D BMS_3450 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D BMS_2030 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D BMS_3277 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D BMS_1098 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D BMS_rRNA0001 BMS_rRNA0001 K01985 5SrRNA; 5S ribosomal RNA
D BMS_rRNA0002 BMS_rRNA0002 K01985 5SrRNA; 5S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bmx03009]
D BMS_2016 rnc; Ribonuclease III (RNase III) K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BMS_2015 era; GTP-binding protein K03595 era; GTPase
D BMS_2982 putative GTP-binding protein K03979 obgE; GTPase [EC:3.6.5.-]
D BMS_0622 dksA; putative DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
D BMS_1856 dksA/traR C4-type zinc finger family protein K06204 dksA; RNA polymerase-binding transcription factor
D BMS_2210 putative DnaK suppressor family protein K06204 dksA; RNA polymerase-binding transcription factor
D BMS_1274 putative DnaK suppressor protein homologue K06204 dksA; RNA polymerase-binding transcription factor
D BMS_1861 nusA; transcription pausing; L factor K02600 nusA; transcription termination/antitermination protein NusA
D BMS_2799 putative N utilisation protein K03625 nusB; transcription antitermination protein NusB
D BMS_3316 nusG; putative transcription antitermination protein K02601 nusG; transcription termination/antitermination protein NusG
D BMS_0723 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D BMS_2651 conserved hypothetical protein K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D BMS_2951 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BMS_0077 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D BMS_3444 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BMS_0057 mraW; putative S-adenosyl-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D BMS_1475 putative methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BMS_1889 putative corrin/porphyrin methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D BMS_1842 conserved hypothetical protein K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242]
D BMS_3088 putative RNA methyltransferase K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D BMS_3323 yacO; SpoU rRNA Methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D BMS_0102 rrmJ; 23S rRNA methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D BMS_0941 putative methyltransferase K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174]
D BMS_2984 ybeA; conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D BMS_0110 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D BMS_1014 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D BMS_2554 conserved hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D BMS_1610 conserved hypothetical protein K25136 rlmK; 23S rRNA (guanine2069-N7)-methyltransferase [EC:2.1.1.264]
D BMS_3036 conserved hypothetical protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D BMS_0882 conserved hypothetical protein K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]
D BMS_0863 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BMS_2742 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BMS_2353 conserved hypothetical protein K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D BMS_2963 putative 23S rRNA (uracil-5-)-methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D BMS_2458 putative pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BMS_0420 putative RNA pseudouridylate synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D BMS_0995 putative pseudouridylate synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D BMS_0994 putative pseudouridine Synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BMS_2875 rluD; putative ribosomal large subunit pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BMS_3057 putative ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BMS_2698 putative ribosomal large subunit pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D BMS_1863 putative acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D BMS_2137 putative ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D BMS_2413 putative ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D BMS_2477 putative ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D BMS_1897 rimM; 16S rRNA processing protein K02860 rimM; 16S rRNA processing protein RimM
D BMS_3203 radical SAM-superfamily protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D BMS_1169 conserved hypothetical protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor
D BMS_0076 putative ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D BMS_2716 rng; RNase G K08301 rng; ribonuclease G [EC:3.1.26.-]
D BMS_0625 putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D BMS_0424 putative RNA helicase dead-box protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D BMS_0652 engC; Probable GTPase engC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D BMS_2014 putative GTP-binding protein K03977 engA; GTPase
D BMS_0942 putative GTPase K14540 rbgA; ribosome biogenesis GTPase A
D BMS_0601 putative GTP-binding protein K03665 hflX; GTPase
D BMS_2778 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BMS_0492 relA; putative GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D BMS_1859 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D BMS_1862 yhbC; conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D BMS_2983 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D BMS_0572 ybeY; conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
D BMS_2673 putative sigma(54) modulation protein K05808 hpf; ribosome hibernation promoting factor
D BMS_3405 conserved hypothetical protein K06942 ychF; ribosome-binding ATPase
D BMS_2788 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:bmx03016]
D BMS_2086 putative poly(A) polymerase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D BMS_3324 proS; proline tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D BMS_0693 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D BMS_2339 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BMS_0934 metG; putative methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D BMS_1200 glnS; glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D BMS_1250 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BMS_2682 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BMS_0445 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D BMS_1835 asnS; asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D BMS_2944 glyQS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BMS_1866 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D BMS_2447 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D BMS_2626 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D BMS_0250 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D BMS_0446 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D BMS_1903 pheS; phenylalanyl-tRNA synthetase alpha chain K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D BMS_1902 pheT; phenylalanyl-tRNA synthetase beta chain K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D BMS_1202 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BMS_2994 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D BMS_2312 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D BMS_0630 putative nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BMS_1156 putative HIT-family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BMS_0406 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D BMS_0240 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BMS_2327 putative tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D BMS_1858 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D BMS_1190 truD; tRNA pseudouridine synthase D K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D BMS_2410 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_3052 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_2118 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_2778 conserved hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D BMS_2755 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D BMS_3446 putative tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D BMS_3445 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BMS_3449 rnpA; Ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D BMS_3221 rph; putative ribonuclease K00989 rph; ribonuclease PH [EC:2.7.7.56]
D BMS_2551 putative ATP-binding component of ABC transporter K06020 ettA; energy-dependent translational throttle protein EttA
D BMS_1670 lysS; Lysyl-tRNA synthetase K04566 lysK; lysyl-tRNA synthetase, class I [EC:6.1.1.6]
D BMS_1201 gltX; Glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D BMS_2325 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D BMS_2317 conserved hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D BMS_0046 putative nucleotide deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D BMS_3189 putative tRNA-dihydrouridine synthease K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D BMS_2157 dusB; tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D BMS_2665 putative radical SAM protein K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D BMS_0517 conserved hypothetical protein K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D BMS_1153 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D BMS_2425 conserved hypothetical protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D BMS_2426 yecP; conserved hypothetical protein K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D BMS_1313 protein Gid homolog K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D BMS_1896 trmD; tRNA(guanine-N1)methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D BMS_2750 trmH; tRNA (guanosine-2'-O-)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D BMS_1844 conserved hypothetical protein K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D BMS_2970 putative rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D BMS_2858 putative tRNA pseudouridylate synthase K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26]
D BMS_2458 putative pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
D BMS_1915 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BMS_1917 putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D BMS_3376 iscA; iron-sulfur cluster assembly protein K13628 iscA; iron-sulfur cluster assembly protein
D BMS_1568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D BMS_2513 putative transcriptional regulatory protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D BMS_2613 conserved hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D BMS_2203 putative radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D BMS_2143 conserved hypothetical protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D BMS_2501 yjeS; putative 4Fe-4S binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D BMS_1569 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BMS_2217 tgt; queuine tRNA-ribosyltransferase (tRNA-guanine transglycosylase) (Guanine insertion enzyme) K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D BMS_2409 thiI; thiamine biosynthesis protein thiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D BMS_1780 tilS; tRNA(Ile)-lysidine synthase (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D BMS_0236 putative glycoprotein endopeptidase K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D BMS_2121 putative ATP/GTP hydrolase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D BMS_2352 conserved hypothetical protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D BMS_1583 putative molybdopterin biosynthesis-related protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D BMS_1508 pnpA; putative polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bmx03012]
D BMS_0966 conserved hypothetical protein K03113 EIF1; translation initiation factor 1
D BMS_1860 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BMS_2031 infC; translation initiation factor if-3 K02520 infC; translation initiation factor IF-3
D BMS_0435 putative ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D BMS_2076 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D BMS_0230 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D BMS_3305 tuf1; elongation factor Tu (EF-Tu) K02358 tuf; elongation factor Tu
D BMS_3318 tuf2; elongation factor Tu (EF-Tu) K02358 tuf; elongation factor Tu
D BMS_3306 fusA; elongation factor G (EF-G) K02355 fusA; elongation factor G
D BMS_2092 fusA; Elongation factor G (EF-G) K02355 fusA; elongation factor G
D BMS_0627 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D BMS_0232 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D BMS_0628 putative methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D BMS_3406 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D BMS_3278 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D BMS_0134 efp; Elongation factor P (EF-P) K02356 efp; elongation factor P
D BMS_3197 poxA; putative lysyl-tRNA synthetase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-]
D BMS_3101 conserved hypothetical protein K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-]
D BMS_0574 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D BMS_1620 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D BMS_1618 putative peptidyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:bmx03110]
D BMS_2669 clpA; putative ATP-dependent Clp protease ATP-binding subunit K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D BMS_1537 clpB; ClpB protein (heat shock protein f84.1) K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D BMS_2640 clpX; ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D BMS_1278 htpG; chaperone protein (heat shock protein) K04079 HSP90A; molecular chaperone HtpG
D BMS_3243 dnaK; Chaperone protein dnaK (HSP70) K04043 dnaK; molecular chaperone DnaK
D BMS_0281 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BMS_3242 dnaJ; Chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D BMS_0259 putative chaperonin K04083 hslO; molecular chaperone Hsp33
D BMS_3244 grpE; Protein grpE (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D BMS_0280 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D BMS_1779 ftsH; cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D BMS_0009 atpB; ATP synthase A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D BMS_1598 p pilus assembly protein, chaperone papd. p pilus assembly protein, chaperone papd K07346 fimC; fimbrial chaperone protein
D BMS_0041 putative secreted protein K06006 cpxP; periplasmic protein CpxP/Spy
D BMS_1411 putative serine metalloprotease precursor K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D BMS_2097 putative serine metalloprotease precursor K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D BMS_1331 putative serine metalloprotease precursor K08651 E3.4.21.66; thermitase [EC:3.4.21.66]
D BMS_1772 putative serine metalloprotease precursor K14645 K14645; serine protease [EC:3.4.21.-]
D BMS_0656 ppiA; probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BMS_2435 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BMS_2917 putative peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D BMS_1850 putative FkbP-type peptidyl-prolyl cis-trans isomerase K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D BMS_1197 fklB; putative FkbP-type 22 kDa peptidyl-prolyl cis-trans isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8]
D BMS_1912 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D BMS_0969 putative peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D BMS_0985 ppiC; peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D BMS_0275 trxA; thioredoxin K03671 TXN; thioredoxin
D BMS_1394 putative thioredoxin K03671 TXN; thioredoxin
D BMS_1106 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2
D BMS_2288 conserved hypothetical protein K07390 grxD; monothiol glutaredoxin
D BMS_3272 putative thioredoxin protein K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:bmx04131]
D BMS_2185 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D BMS_3067 putative transmembrane protein K07192 FLOT; flotillin
D BMS_2883 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BMS_2502 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BMS_1278 htpG; chaperone protein (heat shock protein) K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:bmx04121]
C 03051 Proteasome [BR:bmx03051]
D BMS_1278 htpG; chaperone protein (heat shock protein) K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bmx03032]
D BMS_1852 rnhA; ribonuclease H (RNase H) K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D BMS_1919 modification methylase (cytosine-specific DNA methylase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BMS_2117 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BMS_1257 ihfA; integration host factor alpha-subunit (IHF-alpha) K04764 ihfA; integration host factor subunit alpha
D BMS_1577 ihfB; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D BMS_0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D BMS_1376 putative chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BMS_2710 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D BMS_0405 putative DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D BMS_2893 ssb; putative single strand binding protein K03111 ssb; single-strand DNA-binding protein
D BMS_2518 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BMS_0002 dnaN; putative DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BMS_1831 putative DNA polymerase-related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BMS_2721 putative DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_1335 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_0670 putative DNA polymerase III PolC-type alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_0050 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BMS_1893 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D BMS_0277 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BMS_3428 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BMS_0005 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BMS_1255 putative DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BMS_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BMS_1254 putative DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BMS_2585 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bmx03036]
D BMS_1919 modification methylase (cytosine-specific DNA methylase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BMS_2016 rnc; Ribonuclease III (RNase III) K03685 rnc; ribonuclease III [EC:3.1.26.3]
D BMS_3067 putative transmembrane protein K07192 FLOT; flotillin
D BMS_2117 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BMS_1257 ihfA; integration host factor alpha-subunit (IHF-alpha) K04764 ihfA; integration host factor subunit alpha
D BMS_1577 ihfB; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D BMS_0001 dnaA; Chromosomal replication initiator protein dnaA K02313 dnaA; chromosomal replication initiator protein
D BMS_1376 putative chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D BMS_2418 putative ferritin DPS-family DNA binding protein K04047 dps; starvation-inducible DNA-binding protein
D BMS_0840 putative LysR-family transcriptional regulator K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D BMS_3070 lrp; leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D BMS_3207 smc; chromosome partition protein K03529 smc; chromosome segregation protein
D BMS_0418 conserved hypothetical protein K05896 scpA; segregation and condensation protein A
D BMS_0419 putative segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D BMS_0068 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D BMS_2727 putative putrescine transport ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D BMS_0059 ftsI; putative penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D BMS_0228 ftsK; DNA translocase K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D BMS_0064 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
D BMS_0069 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D BMS_3235 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BMS_2916 mreC; rod shape-determining protein K03570 mreC; rod shape-determining protein MreC
D BMS_2913 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D BMS_1557 putative chromosome partitioning protein K03496 parA; chromosome partitioning protein
D BMS_3443 parA; putative ParA chromosome partitioning protein K03496 parA; chromosome partitioning protein
D BMS_2442 putative replication protein K03496 parA; chromosome partitioning protein
D BMS_3048 putative chromosome partitioning protein K03496 parA; chromosome partitioning protein
D BMS_1452 putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BMS_3442 putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BMS_3047 putative chromosome segregation protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BMS_3445 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D BMS_3444 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D BMS_1313 protein Gid homolog K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D BMS_1697 xerC; putative integrase/tyrosine recombinase K04763 xerD; integrase/recombinase XerD
D BMS_3402 putative ATP-binding Mrp family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D BMS_0485 engB; putative GTP-binding protein engB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bmx03400]
D BMS_2597 ogt; putative methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D BMS_2619 phr; putative deoxyribodipyrimidine photolyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D BMS_2321 ung; uracil-DNA glycosylase (UDG) K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D BMS_3163 mutY; putative A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D BMS_2607 putative endonuclease K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D BMS_3188 putative mutator protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D BMS_1509 putative deoxyuridine 5'triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D BMS_2830 tag; putative DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D BMS_1134 fpg; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D BMS_0958 exoA; putative exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D BMS_3385 putative endonuclease K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D BMS_0657 putative single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D BMS_3428 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D BMS_0277 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D BMS_0019 uvrA; UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A) K03701 uvrA; excinuclease ABC subunit A
D BMS_0143 putative excinuclease ABC subunit K03701 uvrA; excinuclease ABC subunit A
D BMS_2182 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D BMS_0546 uvrC; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D BMS_0195 pcrA; ATP-dependent DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BMS_1986 rep; Rep helicase, a single-stranded DNA-dependent ATPase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D BMS_3310 rpoB; DNA-directed RNA polymerase beta chain K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D BMS_3309 rpoC; DNA-directed RNA polymerase beta' chain K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D BMS_3274 rpoA; DNA-directed RNA polymerase alpha chain K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D BMS_0148 rpoZ; DNA-directed RNA polymerase omega chain K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D BMS_0023 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D BMS_2677 mutS; putative DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D BMS_0105 putative DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D BMS_2754 mutL; putative DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL
D BMS_2723 xseA; putative exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D BMS_3350 xseB; putative exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D BMS_2518 dnaE; DNA polymerase III alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D BMS_0002 dnaN; putative DNA polymerase III, beta chain K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D BMS_1831 putative DNA polymerase-related protein K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D BMS_2721 putative DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_1335 conserved hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_0670 putative DNA polymerase III PolC-type alpha subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D BMS_0050 dnaX; DNA polymerase III, tau subunit K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D BMS_2893 ssb; putative single strand binding protein K03111 ssb; single-strand DNA-binding protein
D BMS_0155 recA; recombinase A K03553 recA; recombination protein RecA
D BMS_3340 ruvA; holliday junction DNA helicase ruvA K03550 ruvA; holliday junction DNA helicase RuvA
D BMS_3339 ruvB; holliday junction DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D BMS_3341 ruvC; putative crossover Holliday junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D BMS_2625 putative primosomal protein n'(replication factor Y) K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D BMS_1834 putative exonuclease K03546 sbcC; DNA repair protein SbcC/Rad50
D BMS_1833 putative exonuclease K03547 sbcD; DNA repair protein SbcD/Mre11
D BMS_3425 sms; putative DNA repair protein K04485 radA; DNA repair protein RadA/Sms
D BMS_0003 putative DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D BMS_0161 putative ATP-dependent DNA helicase K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D BMS_0052 recR; recombination protein K06187 recR; recombination protein RecR
D BMS_0085 recN; putative DNA repair protein K03631 recN; DNA repair protein RecN (Recombination protein N)
D BMS_0970 putative DEAD box helicase family protein K19789 radD; DNA repair protein RadD
D BMS_0005 gyrA; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BMS_1255 putative DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D BMS_0004 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BMS_1254 putative DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D BMS_2585 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D BMS_2117 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D BMS_1257 ihfA; integration host factor alpha-subunit (IHF-alpha) K04764 ihfA; integration host factor subunit alpha
D BMS_1577 ihfB; integration host factor beta-subunit K05788 ihfB; integration host factor subunit beta
D BMS_1370 putative ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BMS_0896 recQ; ATP-dependent DNA helicase K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D BMS_1650 dinB; DNA polymerase IV (Pol IV) K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D BMS_1796 umuC; putative DNA repair protein K03502 umuC; DNA polymerase V
D BMS_1795 umuD; SOS mutagenesis; error-prone repair; processed to UmuD'; forms complex with UmuC K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D BMS_1651 dinR; DNA damage-inducible lexA repressor (SOS regulatory protein) K01356 lexA; repressor LexA [EC:3.4.21.88]
D BMS_2689 polB; DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7]
D BMS_0154 putative regulatory protein K03565 recX; regulatory protein
D BMS_2284 putative exonuclease K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D BMS_1694 nrdL; putative ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D BMS_1695 nrdM; putative ribonucleoside-diphosphate reductase small chain subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bmx03029]
D BMS_1860 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D BMS_2031 infC; translation initiation factor if-3 K02520 infC; translation initiation factor IF-3
D BMS_0230 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D BMS_3305 tuf1; elongation factor Tu (EF-Tu) K02358 tuf; elongation factor Tu
D BMS_3318 tuf2; elongation factor Tu (EF-Tu) K02358 tuf; elongation factor Tu
D BMS_3306 fusA; elongation factor G (EF-G) K02355 fusA; elongation factor G
D BMS_2092 fusA; Elongation factor G (EF-G) K02355 fusA; elongation factor G
D BMS_3020 putative helicase K17675 SUPV3L1; ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:5.6.2.6]
D BMS_1997 putative beta-lactamase family protein K16639 LACTB2; endoribonuclease LACTB2 [EC:3.1.27.-]
D BMS_2015 era; GTP-binding protein K03595 era; GTPase
D BMS_1202 tyrS; putative tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D BMS_2339 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D BMS_2682 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D BMS_2944 glyQS; Glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D BMS_1250 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D BMS_2893 ssb; putative single strand binding protein K03111 ssb; single-strand DNA-binding protein
D BMS_0140 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D BMS_0577 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D BMS_3243 dnaK; Chaperone protein dnaK (HSP70) K04043 dnaK; molecular chaperone DnaK
D BMS_3244 grpE; Protein grpE (HSP-70 cofactor) K03687 GRPE; molecular chaperone GrpE
D BMS_0281 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BMS_0280 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D BMS_3242 dnaJ; Chaperone protein K03686 dnaJ; molecular chaperone DnaJ
D BMS_2410 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_3052 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_2118 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_2288 conserved hypothetical protein K07390 grxD; monothiol glutaredoxin
D BMS_1239 putative nitrogen fixation-related protein K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D BMS_3402 putative ATP-binding Mrp family protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D BMS_0218 putative protoheme IX farnesyltransferase (heme O synthase) K02257 COX10; heme o synthase [EC:2.5.1.141]
D BMS_0217 putative cytochrome oxidase assembly protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D BMS_3448 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BMS_0223 putative exported protein K07152 SCO1; protein SCO1
D BMS_1278 htpG; chaperone protein (heat shock protein) K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bmx02000]
D BMS_2945 putative ABC transport system, ATP-binding protein K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D BMS_1923 putative ABC transporter, ATP-binding/permease protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D BMS_2506 putative ABC transport system, membrane protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D BMS_1922 putative ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D BMS_2505 putative ABC transporter, ATP-binding/permease protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D BMS_2590 ABC transporter ATP-binding protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D BMS_0645 uup; putative ABC transport system, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D BMS_0510 modA; molybdate-binding periplasmic protein precursor K02020 modA; molybdate transport system substrate-binding protein
D BMS_0511 modB; molybdenum transport system permease protein K02018 modB; molybdate transport system permease protein
D BMS_0512 modC; molybdenum transport ATP-binding protein ModC K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D BMS_0225 putative iron-uptake ABC transport system periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D BMS_1118 putative D-ribose-binding protein precursor K10439 rbsB; ribose transport system substrate-binding protein
D BMS_2781 putative membrane protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D BMS_2783 putative membrane protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D BMS_2782 putative ABC transport ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D BMS_2384 pstS; phosphate-binding periplasmic protein K02040 pstS; phosphate transport system substrate-binding protein
D BMS_2385 pstC; putative phosphate transport system permease K02037 pstC; phosphate transport system permease protein
D BMS_2386 pstA; phosphate transport system permease protein K02038 pstA; phosphate transport system permease protein
D BMS_2387 pstB; phosphate import ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D BMS_1959 putative lipoprotein K02044 phnD; phosphonate transport system substrate-binding protein
D BMS_1961 putative binding-protein-dependent transport system membrane component K02042 phnE; phosphonate transport system permease protein
D BMS_1960 putative ABC transport ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D BMS_1317 aapJ; General L-amino acid substrate binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein
D BMS_1680 putative extracellular ligand-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D BMS_1679 putative transport system permease protein K01997 livH; branched-chain amino acid transport system permease protein
D BMS_1678 putative transport system permease protein K01998 livM; branched-chain amino acid transport system permease protein
D BMS_1677 putative transport ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D BMS_1676 putative ATP-binding ABC transporter protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D BMS_0410 putative exported protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_1213 putative amino acid ABC transport system, periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_1214 putative amino acid ABC transport system, periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_1979 putative exported protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_2680 conserved hypothetical protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_2098 putative amino acid ABC transport system, periplasmic protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_2841 putative exported protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_2094 putative ABC transport system, exported protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_2589 putative exported protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_2835 putative exported protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_1962 putative exported protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_1716 putative ABC transporter protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D BMS_2374 dppA; periplasmic dipeptide transport protein precursor K12368 dppA; dipeptide transport system substrate-binding protein
D BMS_2375 dppB; putative dipeptide transport system permease protein K12369 dppB; dipeptide transport system permease protein
D BMS_2376 dppC; putative didpeptide permease component of ABC transporter K12370 dppC; dipeptide transport system permease protein
D BMS_2377 dppD; putative dipeptide ABC transporter component K12371 dppD; dipeptide transport system ATP-binding protein
D BMS_2378 dppF; dipeptide transport ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein
D BMS_0075 putative periplasmic substrate-binding transport protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BMS_3174 putative peptide-binding exported protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BMS_0153 putative extracellular solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BMS_3003 putative ABC transport system solute-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D BMS_3002 putative ABC transporter, permease protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BMS_3232 oppB_1; oligopeptide permease K02033 ABC.PE.P; peptide/nickel transport system permease protein
D BMS_3231 putative dipeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BMS_3001 putative oligopeptide transport system permease protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D BMS_0503 putative ATP-binding component of ABC transporter K02031 ddpD; peptide/nickel transport system ATP-binding protein
D BMS_0300 ABC transport system, substrate-binding lipoprotein K13893 yejA; microcin C transport system substrate-binding protein
D BMS_0301 putative ABC transport system, membrane protein K13894 yejB; microcin C transport system permease protein
D BMS_0302 putative ABC transport system, membrane protein K13895 yejE; microcin C transport system permease protein
D BMS_0819 hmuT; hemin-binding periplasmic protein K25132 hmuT; heme transport system substrate-binding protein
D BMS_0820 hmuU; transmembrane permease component of haem ABC transporter K25133 hmuU; heme transport system permease protein
D BMS_0821 putative ABC transport, ATP-binding protein K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D BMS_2526 btuF; putative vitamin B12-binding protein precursor K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D BMS_0291 putative transport system lipoprotein K25034 btuF; cobalamin transport system substrate-binding protein
D BMS_0293 putative iron ABC transporter, permease protein K25027 btuC; cobalamin transport system permease protein
D BMS_0292 putative iron(III) transport system, ATP-binding protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D BMS_0914 putative ABC transporter, substrate-binding lipoprotein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D BMS_0912 putative ABC transport system, ATP-binding protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D BMS_0913 putative ABC transport system, ATP-binding protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D BMS_3142 putative polysaccharide export ABC transporter permease protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D BMS_2967 putative permease K07091 lptF; lipopolysaccharide export system permease protein
D BMS_3415 putative transport-related membrane protein K11720 lptG; lipopolysaccharide export system permease protein
D BMS_2675 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D BMS_0709 putative membrane protein K25151 gldF; gliding motility-associated transport system permease protein
D BMS_0708 putative ABC transporter ATP-binding protein K25152 gldA; gliding motility-associated transport system ATP-binding protein
D BMS_0710 putative membrane protein K25153 gldG; gliding motility-associatede transport system auxiliary component
D BMS_1820 putative membrane protein K09808 lolC_E; lipoprotein-releasing system permease protein
D BMS_0576 ABC transporter ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D BMS_2727 putative putrescine transport ATP-binding protein K09812 ftsE; cell division transport system ATP-binding protein
D BMS_2324 putative ABC transporter, permease protein K25154 evrC; viologen exporter family transport system permease protein
D BMS_2323 putative ABC transporter, permease protein K25155 evrB; viologen exporter family transport system permease protein
D BMS_2322 putative ABC transporter, ATP-binding protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D BMS_3068 putative ABC transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D BMS_3141 putative O-antigen export ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BMS_0124 putative pilus-related ABC transporter ATP-binding subunit K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BMS_1357 putative ABC transporter, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BMS_3069 ABC transport system, ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D BMS_1352 putative ABC transport system, membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BMS_0575 putative ABC transport system, membrane protein K02004 ABC.CD.P; putative ABC transport system permease protein
D BMS_1351 putative ABC transport system, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D BMS_1242 putative ABC transport system, ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein
D BMS_1004 putative transmembrane transport efflux protein K26939 norM; MATE family, multidrug efflux pump
D BMS_1342 norM; putative multidrug resistance protein NorM (Na(+)/drug antiporter) K26939 norM; MATE family, multidrug efflux pump
D BMS_2277 putative DNA-damage inducible membrane protein K26937 dinF; MATE family, multidrug efflux pump
D BMS_0739 putative drug/sodium antiporter K26937 dinF; MATE family, multidrug efflux pump
D BMS_2842 bcr; putative bicyclomycin resistance protein (probable transporter) K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D BMS_1147 araJ; transmembrane efflux protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D BMS_1712 putative cation efflux transmembrane transport protein K10716 kch; voltage-gated potassium channel
D BMS_2280 putative transport-related membrane protein K10716 kch; voltage-gated potassium channel
D BMS_1054 putative membrane protein K10716 kch; voltage-gated potassium channel
D BMS_0738 putative glutathione S transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D BMS_1178 putative glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D BMS_0114 putative membrane protein (von Willebrand factor type A) K07114 yfbK; Ca-activated chloride channel homolog
D BMS_0115 putative membrane protein (von Willebrand factor type A) K07114 yfbK; Ca-activated chloride channel homolog
D BMS_2997 yfbK; hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D BMS_0284 putative transport-related transmembrane protein K03442 mscS; small conductance mechanosensitive channel
D BMS_0455 putative transport-related inner membrane protein K03442 mscS; small conductance mechanosensitive channel
D BMS_1536 putative membrane protein K16052 ynaI; MscS family membrane protein
D BMS_2757 putative magnesium binding ptotein K06213 mgtE; magnesium transporter
D BMS_2700 motA; putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D BMS_2699 motB; putative sodium-driven polar flagellar protein K02557 motB; chemotaxis protein MotB
D BMS_2394 putative transport-related protein K03561 exbB; biopolymer transport protein ExbB
D BMS_0273 putative transport related membrane protein K03561 exbB; biopolymer transport protein ExbB
D BMS_1026 putative biopolymer transport protein K03561 exbB; biopolymer transport protein ExbB
D BMS_1382 putative motility membrane protein K03561 exbB; biopolymer transport protein ExbB
D BMS_1027 putative biopolymer transport protein K03559 exbD; biopolymer transport protein ExbD
D BMS_2395 putative transport-related membrane protein K03559 exbD; biopolymer transport protein ExbD
D BMS_2735 tolQ; TolQ protein K03562 tolQ; biopolymer transport protein TolQ
D BMS_2734 exbD; putative biopolymer transport protein K03560 tolR; biopolymer transport protein TolR
D BMS_0835 putative transmembrane magnesium and cobalt transporter protein K03284 corA; magnesium transporter
D BMS_3185 putative modulator of ions transport K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BMS_1696 putative transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BMS_1158 putative exported protein K11929 phoE; outer membrane pore protein E
D BMS_0289 putative vitamin B12 receptor protein K16092 btuB; vitamin B12 transporter
D BMS_2065 putative outer membrane protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D BMS_0523 putative TonB-dependent outer membrane receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D BMS_0999 putative outer membrane protein K15725 czcC; outer membrane protein, heavy metal efflux system
D BMS_2839 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BMS_0140 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D BMS_0577 putative outer membrane protein K07277 SAM50; outer membrane protein insertion porin family
D BMS_2009 putative exported protein K17713 bamB; outer membrane protein assembly factor BamB
D BMS_3364 putative comtepence-related protein K05807 bamD; outer membrane protein assembly factor BamD
D BMS_0139 putative membrane protein K09800 tamB; translocation and assembly module TamB
D BMS_1882 putative organic solvent tolerance protein precursor K04744 lptD; LPS-assembly protein
D BMS_0997 putative cation efflux system protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D BMS_0843 probable metal transporter K07238 TC.ZIP; zinc transporter, ZIP family
D BMS_1001 czcA; putative cation efflux system protein K15726 czcA; heavy metal efflux system protein
D BMS_1764 putative cation efflux system protein K07787 cusA; copper/silver efflux system protein
D BMS_0453 probable membrane protein K18138 acrB; multidrug efflux pump
D BMS_0818 putative integral membrane protein K03297 emrE; small multidrug resistance pump
D BMS_0839 putative molecular chaperone K11741 sugE; quaternary ammonium compound-resistance protein SugE
D BMS_2302 rarD; putative chloramphenicol resistance membrane protein K05786 rarD; chloramphenicol-sensitive protein RarD
D BMS_1093 putative membrane protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D BMS_1669 putative choline transport membrane protein K02168 betT; choline/glycine/proline betaine transport protein
D BMS_0718 putative sodium/calcium exchanger protein K07301 yrbG; cation:H+ antiporter
D BMS_0905 putP; high affinity proline permease K11928 putP; sodium/proline symporter
D BMS_0315 putative transmembrane Na+/H+ antiporter K03315 nhaC; Na+:H+ antiporter, NhaC family
D BMS_1183 putative Na+/H+ exchanger K11105 cvrA; potassium/hydrogen antiporter
D BMS_2962 cation transport protein K03498 trkH; trk/ktr system potassium uptake protein
D BMS_2961 putative potassium transporter K03499 trkA; trk/ktr system potassium uptake protein
D BMS_0282 putative transport-related, membrane protein K03281 clcA; chloride channel protein, CIC family
D BMS_1070 putative voltage gated chloride channel membrane protein K03281 clcA; chloride channel protein, CIC family
D BMS_2474 putative integral membrane transport protein K03321 TC.SULP; sulfate permease, SulP family
D BMS_0702 putative C4-dicarboxylate transporter, large subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D BMS_0701 putative ABC transport system, membrane protein K21394 yiaM; TRAP-type transport system small permease protein
D BMS_0700 putative ABC transporter periplasmic solute-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein
D BMS_1631 putative transmembrane Na+/Pi-cotransporter K03324 yjbB; phosphate:Na+ symporter
D BMS_2037 putative putative Na+/Pi-cotransporter protein K03324 yjbB; phosphate:Na+ symporter
D BMS_2490 arsB; putative arsenical pump transmembrane protein K03325 ACR3; arsenite transporter
D BMS_0537 putative membrane protein K03980 murJ; putative peptidoglycan lipid II flippase
D BMS_0841 yggA; putative LysE type translocator K06895 lysE; L-lysine exporter family protein LysE/ArgO
D BMS_3365 putative membrane protein K03548 perM; putative permease
D BMS_2101 putative membrane protein K05595 marC; multiple antibiotic resistance protein
D BMS_0064 ftsW; cell division protein K03588 ftsW; cell division protein FtsW
D BMS_0854 putative membrane protein K15383 K15383; MtN3 and saliva related transmembrane protein
D BMS_1199 putative exported TonB protein K03832 tonB; periplasmic protein TonB
D BMS_0729 pal; peptidoglycan-associated lipoprotein precursor K03640 pal; peptidoglycan-associated lipoprotein
D BMS_2733 putative membrane protein K03646 tolA; colicin import membrane protein
D BMS_2732 putative periplasmic TolB protein K03641 tolB; TolB protein
D BMS_0866 putative cytochrome c biogenesis-related protein K06196 ccdA; cytochrome c-type biogenesis protein
D BMS_1765 putative metal transport-related, exported protein K07798 cusB; membrane fusion protein, copper/silver efflux system
D BMS_0269 feoB; ferrous iron transport protein K04759 feoB; ferrous iron transport protein B
D BMS_1951 putative cation transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D BMS_1362 putative cell division-related protein K07274 mipA; MipA family protein
D BMS_2107 putative membrane protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:bmx02044]
D BMS_2839 putative outer membrane efflux protein K12340 tolC; outer membrane protein
D BMS_1270 putative general secretion pathway protein D K02453 gspD; general secretion pathway protein D
D BMS_1268 gspF; general secretion pathway protein F K02455 gspF; general secretion pathway protein F
D BMS_1267 gspG; putative general secretion pathway export protein G K02456 gspG; general secretion pathway protein G
D BMS_1262 putative membrane protein K02461 gspL; general secretion pathway protein L
D BMS_0126 pilD; putative type IV prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D BMS_0122 pilE; pilin K02650 pilA; type IV pilus assembly protein PilA
D BMS_0119 pilF; type IV pilus assembly protein K02652 pilB; type IV pilus assembly protein PilB
D BMS_0121 pilG; pilus-assembly protein K02653 pilC; type IV pilus assembly protein PilC
D BMS_0127 putative pilus assembly protein K02662 pilM; type IV pilus assembly protein PilM
D BMS_0128 putative pilus assembly protein K02663 pilN; type IV pilus assembly protein PilN
D BMS_0131 putative pilus assembly protein K02666 pilQ; type IV pilus assembly protein PilQ
D BMS_0120 pilT; putative twitching mobility protein K02669 pilT; twitching motility protein PilT
D BMS_2405 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D BMS_3065 putative twitching mobility protein K02669 pilT; twitching motility protein PilT
D BMS_0174 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D BMS_0178 cpaB; putative pilus assembly-related protein K02279 cpaB; pilus assembly protein CpaB
D BMS_0179 cpaC; putative pilus assembly-related protein K02280 cpaC; pilus assembly protein CpaC
D BMS_0180 tadA; putative pilus assembly-related protein K02282 cpaE; pilus assembly protein CpaE
D BMS_1635 cpaF; putative tight adherance flp pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D BMS_1415 putative bacterial secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D BMS_0181 tadB; putative pilus assembly-related protein K12510 tadB; tight adherence protein B
D BMS_3229 putative membrane protein K12511 tadC; tight adherence protein C
D BMS_0172 putative pilus-related subunit K02651 flp; pilus assembly protein Flp/PilA
D BMS_2686 putative membrane protein K02221 yggT; YggT family protein
D BMS_0533 putative deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D BMS_0563 flhA; putative flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D BMS_0562 flhB; flagellar biosynthetic protein K02401 flhB; flagellar biosynthesis protein FlhB
D BMS_2929 fliF; flagellar basal-body M-ring protein K02409 fliF; flagellar M-ring protein FliF
D BMS_2927 fliH; putative flagellar assembly-related protein K02411 fliH; flagellar assembly protein FliH
D BMS_2926 fliI; putative flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D BMS_0557 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D BMS_0559 fliP; flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D BMS_0560 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D BMS_0561 fliR; putative flagellar export protein K02421 fliR; flagellar biosynthesis protein FliR
D BMS_2549 putative TadA-like protein K03196 virB11; type IV secretion system protein VirB11 [EC:7.4.2.8]
D BMS_1598 p pilus assembly protein, chaperone papd. p pilus assembly protein, chaperone papd K07346 fimC; fimbrial chaperone protein
D BMS_1492 secA; preprotein translocase SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D BMS_1572 secD; protein-export membrane protein K03072 secD; preprotein translocase subunit SecD
D BMS_3317 putative preprotein translocase subunit K03073 secE; preprotein translocase subunit SecE
D BMS_1573 secF; protein-export membrane protein K03074 secF; preprotein translocase subunit SecF
D BMS_2886 secG; protein-export membrane protein K03075 secG; preprotein translocase subunit SecG
D BMS_3280 secY; putative preprotein translocase SecY subunit K03076 secY; preprotein translocase subunit SecY
D BMS_2155 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D BMS_3196 ftsY; cell division protein K03110 ftsY; fused signal recognition particle receptor
D BMS_1570 putative preprotein translocase YajC subunit K03210 yajC; preprotein translocase subunit YajC
D BMS_3448 oxaA; membrane protein OxaA K03217 yidC; YidC/Oxa1 family membrane protein insertase
D BMS_1571 putative secreted protein K03116 tatA; sec-independent protein translocase protein TatA
D BMS_2144 tatA; putative Sec-independent protein translocase protein tatA/E homolog K03116 tatA; sec-independent protein translocase protein TatA
D BMS_2240 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:bmx02042]
D BMS_3185 putative modulator of ions transport K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BMS_1696 putative transmembrane protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D BMS_0621 putative membrane protein K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:bmx02022]
D BMS_2390 two-component sensor kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BMS_2057 putative sensor kinase protein K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D BMS_2389 phoB; phosphate regulon transcriptional regulatory protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D BMS_0431 putative positive response regulator for pho regulon, sensor is PhoR (or CreC) K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D BMS_2056 two-component response regulator K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D BMS_0403 putative two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D BMS_2826 putative two-component system response regulator K11624 ydfI; two-component system, NarL family, response regulator YdfI
D BMS_3382 ntrC; nitrogen regulation protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D BMS_2128 putative transcriptional regulatory protein K07713 zraR; two-component system, NtrC family, response regulator HydG
D BMS_3201 putative response regulator in two-component regulatory system K07714 atoC; two-component system, NtrC family, response regulator AtoC
D BMS_0088 putative two-component sensor kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D BMS_2637 cheA; chemotaxis two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BMS_2364 putative regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_0188 cheY; chemotaxis protein cheY homologue K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_1535 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2170 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2846 putative chemotaxis protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2347 putative chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2062 putative two-component system, response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2632 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BMS_0504 putative two-component system, response regulator K13589 cpdR; two-component system, cell cycle response regulator CpdR
D BMS_0680 putative two component system, histidine kinase K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D BMS_0681 putative two-component response regulator transcriptional regulatory protein K15012 regA; two-component system, response regulator RegA
D BMS_2866 putative histidine kinase/response regulator fusion protein K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3]
D BMS_1309 putative two component system histidine kinase/response regulator fusion protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:bmx02035]
D BMS_2637 cheA; chemotaxis two-component sensor kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D BMS_1082 cheW; putative chemotaxis protein K03408 cheW; purine-binding chemotaxis protein CheW
D BMS_2636 cheW; positive regulator of CheA protein activity K03408 cheW; purine-binding chemotaxis protein CheW
D BMS_2172 conserved hypothetical protein K03409 cheX; chemotaxis protein CheX
D BMS_1081 cheD; putative methylation of MCP proteins-related protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D BMS_1080 cheR; putative chemotaxis protein methyltransferase K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BMS_2633 putative chemotactic response, glutamate methyltransferase fusion protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D BMS_2632 cheB; chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D BMS_2364 putative regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_0188 cheY; chemotaxis protein cheY homologue K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_1535 putative chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2170 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2846 putative chemotaxis protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2347 putative chemotaxis regulatory protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_2062 putative two-component system, response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D BMS_0294 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1182 putative methyl-accepting chemotaxis citrate transducer K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1079 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1091 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_1224 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_2634 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_3330 putative methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D BMS_2927 fliH; putative flagellar assembly-related protein K02411 fliH; flagellar assembly protein FliH
D BMS_2926 fliI; putative flagellum-specific ATP synthase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D BMS_2925 hypothetical protein K02413 fliJ; flagellar protein FliJ
D BMS_0559 fliP; flagellar biosynthesis protein K02419 fliP; flagellar biosynthesis protein FliP
D BMS_0560 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D BMS_0561 fliR; putative flagellar export protein K02421 fliR; flagellar biosynthesis protein FliR
D BMS_0563 flhA; putative flagellar biosynthesis protein K02400 flhA; flagellar biosynthesis protein FlhA
D BMS_0562 flhB; flagellar biosynthetic protein K02401 flhB; flagellar biosynthesis protein FlhB
D BMS_2928 fliG; flagellar motor switch protein K02410 fliG; flagellar motor switch protein FliG
D BMS_0556 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D BMS_0557 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D BMS_2929 fliF; flagellar basal-body M-ring protein K02409 fliF; flagellar M-ring protein FliF
D BMS_3355 flgI; Flagellar P-ring protein precursor (Basal body P-ring protein) K02394 flgI; flagellar P-ring protein FlgI
D BMS_3354 hypothetical protein K02393 flgH; flagellar L-ring protein FlgH
D BMS_0555 fliL; putative flagellar protein K02415 fliL; flagellar protein FliL
D BMS_1286 putative flagellar transmembrane protein K02415 fliL; flagellar protein FliL
D BMS_2930 fliE; flagellar hook-basal body complex protein fliE K02408 fliE; flagellar hook-basal body complex protein FliE
D BMS_2932 flgB; flagellar basal-body rod protein K02387 flgB; flagellar basal-body rod protein FlgB
D BMS_2931 flgC; flagellar basal-body rod protein K02388 flgC; flagellar basal-body rod protein FlgC
D BMS_2922 putative basal-body rod modification protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D BMS_3351 flgG2; putative flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D BMS_3352 flgG; flagellar basal-body rod protein K02392 flgG; flagellar basal-body rod protein FlgG
D BMS_1525 putative flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D BMS_2920 flgE; putative flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D BMS_3359 flgK; putative flagellar hook-associated protein 1 K02396 flgK; flagellar hook-associated protein 1
D BMS_3360 flgL; putative flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D BMS_0081 fliC1; putative flagellin FliC K02406 fliC; flagellin
D BMS_0082 fliC2; fliC2 K02406 fliC; flagellin
D BMS_0168 fliC3; flagellin subunit K02406 fliC; flagellin
D BMS_0169 fliC4; flagellin subunit K02406 fliC; flagellin
D BMS_2167 fliC5; putative flagellin subunit K02406 fliC; flagellin
D BMS_0096 putative flagellar hook associated protein K02407 fliD; flagellar hook-associated protein 2
D BMS_0095 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D BMS_0566 RNA polymerase sigma factor WhiG K02405 fliA; RNA polymerase sigma factor FliA
D BMS_2700 motA; putative chemotaxis MotA protein K02556 motA; chemotaxis protein MotA
D BMS_2699 motB; putative sodium-driven polar flagellar protein K02557 motB; chemotaxis protein MotB
D BMS_3362 conserved hypothetical protein K13626 fliW; flagellar assembly factor FliW
D BMS_3357 flgM; putative flagella-related protein K02398 flgM; negative regulator of flagellin synthesis FlgM
D BMS_0565 minD; septum site-determining protein K04562 flhG; flagellar biosynthesis protein FlhG
D BMS_2873 putative flagellar number regulator K04562 flhG; flagellar biosynthesis protein FlhG
D BMS_0120 pilT; putative twitching mobility protein K02669 pilT; twitching motility protein PilT
D BMS_2405 pilT; twitching motility protein K02669 pilT; twitching motility protein PilT
D BMS_3065 putative twitching mobility protein K02669 pilT; twitching motility protein PilT
D BMS_0122 pilE; pilin K02650 pilA; type IV pilus assembly protein PilA
D BMS_0119 pilF; type IV pilus assembly protein K02652 pilB; type IV pilus assembly protein PilB
D BMS_0121 pilG; pilus-assembly protein K02653 pilC; type IV pilus assembly protein PilC
D BMS_0126 pilD; putative type IV prepilin signal peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D BMS_0131 putative pilus assembly protein K02666 pilQ; type IV pilus assembly protein PilQ
D BMS_0128 putative pilus assembly protein K02663 pilN; type IV pilus assembly protein PilN
D BMS_0127 putative pilus assembly protein K02662 pilM; type IV pilus assembly protein PilM
D BMS_0172 putative pilus-related subunit K02651 flp; pilus assembly protein Flp/PilA
D BMS_0174 putative membrane protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D BMS_0178 cpaB; putative pilus assembly-related protein K02279 cpaB; pilus assembly protein CpaB
D BMS_0179 cpaC; putative pilus assembly-related protein K02280 cpaC; pilus assembly protein CpaC
D BMS_0180 tadA; putative pilus assembly-related protein K02282 cpaE; pilus assembly protein CpaE
D BMS_1635 cpaF; putative tight adherance flp pilus assembly protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D BMS_1415 putative bacterial secretion system protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D BMS_1598 p pilus assembly protein, chaperone papd. p pilus assembly protein, chaperone papd K07346 fimC; fimbrial chaperone protein
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bmx04812]
D BMS_3235 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BMS_0069 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D BMS_0068 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D BMS_1557 putative chromosome partitioning protein K03496 parA; chromosome partitioning protein
D BMS_3443 parA; putative ParA chromosome partitioning protein K03496 parA; chromosome partitioning protein
D BMS_2442 putative replication protein K03496 parA; chromosome partitioning protein
D BMS_3048 putative chromosome partitioning protein K03496 parA; chromosome partitioning protein
D BMS_1452 putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BMS_3442 putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D BMS_3047 putative chromosome segregation protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bmx04147]
D BMS_1278 htpG; chaperone protein (heat shock protein) K04079 HSP90A; molecular chaperone HtpG
D BMS_1644 eno; putative Enolase (2-phosphoglycerate dehydratase) (2-phospho-D-glycerate hydro-lyase) K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D BMS_2883 gap; glyceraldehyde 3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D BMS_2502 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D BMS_0656 ppiA; probable peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BMS_2435 ppiA; peptidyl-prolyl cis-trans isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D BMS_3067 putative transmembrane protein K07192 FLOT; flotillin
D BMS_0281 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D BMS_3243 dnaK; Chaperone protein dnaK (HSP70) K04043 dnaK; molecular chaperone DnaK
D BMS_2752 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D BMS_2523 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BMS_2034 putative inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D BMS_3305 tuf1; elongation factor Tu (EF-Tu) K02358 tuf; elongation factor Tu
D BMS_3318 tuf2; elongation factor Tu (EF-Tu) K02358 tuf; elongation factor Tu
D BMS_0630 putative nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BMS_1156 putative HIT-family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D BMS_0149 putative long-chain fatty-acid CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BMS_2863 fadD; long-chain-fatty-acid--CoA-ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D BMS_1367 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_1822 putative thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_2765 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D BMS_3034 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D BMS_3279 adk; putative adenylate kinase (ATP-AMP transphosphorylase) K00939 adk; adenylate kinase [EC:2.7.4.3]
D BMS_3012 metC; cystathionine beta-lyase K01758 CTH; cystathionine gamma-lyase [EC:4.4.1.1]
D BMS_3424 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D BMS_2227 glnA; glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D BMS_1528 hemB; delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D BMS_1999 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D BMS_1625 putative dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D BMS_1913 phoB; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D BMS_2245 putative dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D BMS_1608 purH; putative bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D BMS_2595 putative integral membrane zinc-metalloprotease K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D BMS_0671 putative dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_2256 lpdA; putative dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D BMS_3398 etfA; electron transfer flavoprotein alpha-subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D BMS_3045 gdhA; glutamate dehydrogenase K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D BMS_2885 tpiA; triosephosphate isomerase (TIM) (Triose-phosphate isomerase) K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D BMS_2617 putative exported protein K03098 APOD; apolipoprotein D and lipocalin family protein
C 02048 Prokaryotic defense system [BR:bmx02048]
D BMS_2208 hypothetical protein K19046 casB; CRISPR system Cascade subunit CasB
D BMS_0792 putative type I restriction enzyme K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D BMS_0791 putative type I restriction enzyme specificity protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D BMS_0790 putative type I restriction enzyme modification protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D BMS_1714 putative methylase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D BMS_1919 modification methylase (cytosine-specific DNA methylase) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D BMS_0069 ftsZ; cell division protein K03531 ftsZ; cell division protein FtsZ
D BMS_3235 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D BMS_2410 iscS; putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_3052 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D BMS_2118 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:bmx04090]
C 01504 Antimicrobial resistance genes [BR:bmx01504]
D BMS_0403 putative two-component response regulator K18344 vanRB; two-component system, OmpR family, response regulator VanR
D BMS_0851 putative membrane protein K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D BMS_0453 probable membrane protein K18138 acrB; multidrug efflux pump
D BMS_2839 putative outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bmx00537]
D BMS_1913 phoB; alkaline phosphatase III precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bmx03100]
D BMS_tRNA0005 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BMS_tRNA0014 tRNA-Ala; tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D BMS_tRNA0003 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BMS_tRNA0013 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BMS_tRNA0022 tRNA-Arg; tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D BMS_tRNA0035 tRNA-Asn; tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D BMS_tRNA0024 tRNA-Asp; tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D BMS_tRNA0016 tRNA-Cys; tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D BMS_tRNA0036 tRNA-Gln; tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D BMS_tRNA0010 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BMS_tRNA0012 tRNA-Glu; tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D BMS_tRNA0032 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BMS_tRNA0019 tRNA-Gly; tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D BMS_tRNA0026 tRNA-His; tRNA-His K14226 tRNA-His; tRNA His
D BMS_tRNA0006 tRNA-Ile; tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D BMS_tRNA0025 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BMS_tRNA0018 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BMS_tRNA0015 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BMS_tRNA0008 tRNA-Leu; tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D BMS_tRNA0009 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BMS_tRNA0011 tRNA-Lys; tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D BMS_tRNA0027 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D BMS_tRNA0007 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D BMS_tRNA0017 tRNA-Met; tRNA-Met K14230 tRNA-Met; tRNA Met
D BMS_tRNA0020 tRNA-Phe; tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D BMS_tRNA0029 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BMS_tRNA0028 tRNA-Pro; tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D BMS_tRNA0001 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BMS_tRNA0002 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BMS_tRNA0004 tRNA-Ser; tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D BMS_tRNA0034 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BMS_tRNA0031 tRNA-Thr; tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D BMS_tRNA0030 tRNA-Trp; tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D BMS_tRNA0033 tRNA-Tyr; tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D BMS_tRNA0023 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D BMS_tRNA0021 tRNA-Val; tRNA-Val K14237 tRNA-Val; tRNA Val
D BMS_rRNA0001 BMS_rRNA0001 K01985 5SrRNA; 5S ribosomal RNA
D BMS_rRNA0002 BMS_rRNA0002 K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D BMS_1438 putative cholesterol dehydrogenase K22320 oleD; 2-alkyl-3-oxoalkanoate reductase [EC:1.1.1.412]
D BMS_0891 putative exported protein K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D BMS_1998 conserved hypothetical protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D BMS_1520 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D BMS_0451 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D BMS_0454 msrB; peptide methionine sulfoxide reductase msrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D BMS_0439 putative oxidoreductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D BMS_0838 putative glutathione S-transferase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D BMS_1219 putative cytochrome C peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D BMS_0884 cytochrome C551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D BMS_0159 putative alpha/beta hydrolase fold family protein K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D BMS_2593 bcp; bacterioferritin comigratory protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D BMS_1519 ahpC; alkyl hydroperoxide reductase C subunit K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D BMS_0895 conserved hypothetical protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D BMS_2485 hmpA; putative flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D BMS_1229 putative arsenate oxidoreductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D BMS_2491 arsC; putative arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D BMS_1473 putative methylase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D BMS_3253 putative carbamoyltransferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D BMS_3147 putative transferase K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D BMS_0904 putative acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264]
D BMS_0617 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D BMS_0846 putative acyltransferase K22617 olsA; lyso-ornithine lipid O-acyltransferase [EC:2.3.1.270]
D BMS_2247 putative leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D BMS_1349 putative membrane protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D BMS_1441 putative 3-oxoacyl-[acyl-carrier-protein] synthase III protein K22317 oleA; acyl-CoA:acyl-CoA alkyltransferase [EC:2.3.3.20]
D BMS_1728 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D BMS_0649 conserved hypothetical protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25]
D BMS_2978 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D BMS_2454 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D BMS_1898 fosB; putative fosfomycin resistance protein K11210 fosB; metallothiol transferase [EC:2.5.1.-]
D BMS_2260 apbE; thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D BMS_2756 ydiA; conserved hypothetical protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D BMS_0777 reverse transcriptase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D BMS_2126 putative membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D BMS_0544 putative phosphoenolpyruvate-utilizing enzyme K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D BMS_1422 conserved hypothetical protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D BMS_2373 putative endonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D BMS_0683 putative endonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D BMS_1325 putative endonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D BMS_2878 putative Sec-independent TAT-related transport membrane protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BMS_2351 putative tatD-related DNAse protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D BMS_3417 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BMS_2806 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D BMS_1010 putative polysaccharide deacetylase family protein K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D BMS_2955 conserved hypothetical protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D BMS_1685 maf; putative MAF-like septum formation protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D BMS_0111 putative ATPase K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D BMS_1347 putative regulatory protein K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D BMS_1440 putative haloalkane dehalogenase K22318 oleB; cis-3-alkyl-4-acyloxetan-2-one decarboxylase [EC:4.1.1.114]
D BMS_0542 putative AMP ligase K25044 oleBC; cis-3-alkyl-4-acyloxetan-2-one decarboxylase / olefin beta-lactone synthetase [EC:4.1.1.114 6.1.3.1]
D BMS_2122 putative YjeF-related sugar kinase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D BMS_0226 putative peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8]
D BMS_3379 putative methylmalonyl CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D BMS_1439 putative acyl-CoA ligase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D BMS_2939 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D BMS_2274 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D BMS_2273 nqrB; NADH-ubiquinone oxidoreductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D BMS_2272 nqrC; Na+-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D BMS_2271 nqrD; Na+-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D BMS_2270 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D BMS_2269 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
C 99981 Carbohydrate metabolism
D BMS_1011 sfsA; sugar fermentation stimulation protein homolog K06206 sfsA; sugar fermentation stimulation protein A
C 99982 Energy metabolism
D BMS_2511 conserved hypothetical protein K05337 fer; ferredoxin
D BMS_2918 fdxD; putative ferredoxin K05337 fer; ferredoxin
D BMS_2242 hypothetical protein K13819 K13819; NifU-like protein
D BMS_2249 putative iron-sulfur binding protein K15831 hycF; formate hydrogenlyase subunit 6
D BMS_3397 etfB; putative electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D BMS_0248 putative sulfate transport protein K06203 cysZ; CysZ protein
D BMS_2136 putative lipoprotein K14054 mpaA; murein peptide amidase A
D BMS_1853 conserved hypothetical protein K14054 mpaA; murein peptide amidase A
D BMS_1549 putative alanine racemase K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D BMS_0927 putative membrane protein K07027 K07027; glycosyltransferase 2 family protein
D BMS_2957 putative membrane protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D BMS_0166 putative ubiquinone biosynthesis protein K03688 ubiB; ubiquinone biosynthesis protein
C 99988 Secondary metabolism
D BMS_0993 putative reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D BMS_1031 putative exported protein K22390 ACP7; acid phosphatase type 7
D BMS_1727 putative transmembrane DoxX protein K15977 K15977; putative oxidoreductase
D BMS_1097 estB; carboxylesterase K06999 K06999; phospholipase/carboxylesterase
D BMS_2606 putative hydrolase K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D BMS_0946 cspE; cold shock-like protein K03704 cspA; cold shock protein
D BMS_1814 putative transcriptional accessory protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D BMS_2670 clpS; ATP-dependent Clp protease adaptor protein clpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D BMS_0241 tig; trigger factor K03545 tig; trigger factor
D BMS_0721 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D BMS_0874 putative oxygenase K07394 K07394; SM-20-related protein
D BMS_2855 putative dehydrogenase accessory protein K07402 xdhC; xanthine dehydrogenase accessory factor
D BMS_1460 putative membrane protein K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D BMS_1094 putative DNA recombination protein K09760 rmuC; DNA recombination protein RmuC
D BMS_0779 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family
D BMS_2865 yhbQ; conserved hypothetical protein K07461 K07461; putative endonuclease
D BMS_0689 putative AAA family ATPase protein K07478 ycaJ; putative ATPase
C 99979 Viral proteins
C 99998 Others
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D BMS_1303 putative amino acid transporter transmembrane protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D BMS_3025 putative membrane protein K03301 TC.AAA; ATP:ADP antiporter, AAA family
D BMS_0498 putative sodium:solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D BMS_1773 putative membrane protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D BMS_2717 probable Na+ dependent nucleoside transporter K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D BMS_0476 putative membrane transport protein K03319 TC.DASS; divalent anion:Na+ symporter, DASS family
C 99978 Cell growth
D BMS_2695 putative intracellular septation protein K06190 ispZ; intracellular septation protein
D BMS_1502 conserved hypothetical protein K06415 spoVR; stage V sporulation protein R
C 99993 Cell motility
D BMS_2565 putative lipoprotein K07337 K07337; penicillin-binding protein activator
D BMS_0054 mglA; putative mutual gliding-motility protein MglA K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
D BMS_0434 typA; GTP-binding protein K06207 typA; GTP-binding protein
D BMS_2646 putative phosphate starvation-inducible protein K07175 phoH2; PhoH-like ATPase
D BMS_3056 conserved hypothetical protein K07180 prkA; serine protein kinase
D BMS_1500 putative protein kinase K07180 prkA; serine protein kinase
C 99992 Structural proteins
D BMS_0578 putative exported protein K06142 hlpA; outer membrane protein
D BMS_0283 putative exported protein K07283 ydiY; putative salt-induced outer membrane protein
D BMS_2451 putative membrane protein K11744 tqsA; AI-2 transport protein TqsA
D BMS_2966 putative membrane protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D BMS_2388 phoU; phosphate transport system protein K02039 phoU; phosphate transport system protein
D BMS_2139 putative bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin
D BMS_2604 putative apaG protein (cation efflux-associated) K06195 apaG; ApaG protein
D BMS_0925 putative exported protein K07222 K07222; putative flavoprotein involved in K+ transport
D BMS_1220 putative exported protein K07231 K07231; putative iron-regulated protein
D BMS_1193 putative membrane protein K07234 K07234; uncharacterized protein involved in response to NO
B
B 09194 Poorly characterized
C 99996 General function prediction only
D BMS_1333 putative globin K06886 glbN; hemoglobin
D BMS_1243 putative ABC transportsystem, membrane protein K09014 sufB; Fe-S cluster assembly protein SufB
D BMS_1241 conserved hypothetical protein K09015 sufD; Fe-S cluster assembly protein SufD
D BMS_0959 putative tRNA-processing ribonuclease K07058 K07058; membrane protein
D BMS_2054 putative ribonuclease K07058 K07058; membrane protein
D BMS_2687 putative transport-related membrane protein K07058 K07058; membrane protein
D BMS_0965 putative membrane protein K07113 fxsA; UPF0716 protein FxsA
D BMS_1527 putative SufE Fe/S-cluster-related protein K02426 sufE; cysteine desulfuration protein SufE
D BMS_2489 arsH; putative NADPH-dependent FMN reductase arsenical resistance protein K11811 arsH; arsenical resistance protein ArsH
D BMS_2584 putative membrane protein K08974 K08974; putative membrane protein
D BMS_0213 putative membrane protein K08976 K08976; putative membrane protein
D BMS_0745 putative membrane protein K08987 K08987; putative membrane protein
D BMS_2275 conserved hypothetical protein K09858 K09858; SEC-C motif domain protein
D BMS_0852 phnA; putative phosphonoacetate hydrolase K06193 phnA; protein PhnA
C 99997 Function unknown
D BMS_0879 putative ankyrin repeat-containing exported protein K06867 K06867; uncharacterized protein
D BMS_2899 putative hydrolase K06885 K06885; uncharacterized protein
D BMS_2729 putative phosphohydrolase K06885 K06885; uncharacterized protein
D BMS_1909 conserved hypothetical protein K06888 K06888; uncharacterized protein
D BMS_0464 putative membrane protein K06889 K06889; uncharacterized protein
D BMS_0725 yfhR; putative lipoprotein K06889 K06889; uncharacterized protein
D BMS_3217 conserved hypothetical lipoprotein K06889 K06889; uncharacterized protein
D BMS_2481 putative transmembrane protein K06890 K06890; uncharacterized protein
D BMS_1108 conserved hypothetical protein K06934 K06934; uncharacterized protein
D BMS_0646 hypothetical protein K06940 K06940; uncharacterized protein
D BMS_2147 conserved hypothetical protein K06960 K06960; uncharacterized protein
D BMS_2358 putative peptidase K06978 K06978; uncharacterized protein
D BMS_0509 conserved hypothetical protein K06987 K06987; uncharacterized protein
D BMS_1748 putative conserved hypothetical protein K06987 K06987; uncharacterized protein
D BMS_2414 conserved hypothetical protein K06987 K06987; uncharacterized protein
D BMS_2476 conserved hypothetical protein K06987 K06987; uncharacterized protein
D BMS_1005 putative integral membrane protein K07003 K07003; uncharacterized protein
D BMS_1343 putative integral membrane protein K07003 K07003; uncharacterized protein
D BMS_0501 putative hydrolase K07019 K07019; uncharacterized protein
D BMS_2338 conserved hypothetical protein K07020 K07020; uncharacterized protein
D BMS_2615 conserved hypothetical protein K07071 K07071; uncharacterized protein
D BMS_1173 putative integral membrane protein K07090 K07090; uncharacterized protein
D BMS_0881 hypothetical integral membrane protein K07090 K07090; uncharacterized protein
D BMS_2811 putative integral membrane protein K07090 K07090; uncharacterized protein
D BMS_1067 putative membrane protein K07090 K07090; uncharacterized protein
D BMS_0889 putative membrane protein K07112 K07112; uncharacterized protein
D BMS_0890 putative membrane protein K07112 K07112; uncharacterized protein
D BMS_2479 conserved hypothetical protein K07117 K07117; uncharacterized protein
D BMS_2480 conserved hypothetical protein K07117 K07117; uncharacterized protein
D BMS_3209 putative exported beta-lactamase K07126 K07126; uncharacterized protein
D BMS_1965 conserved hypothetical protein K07137 K07137; uncharacterized protein
D BMS_2871 putative ATP-dependent protease K07157 K07157; uncharacterized protein
D BMS_2714 putative protease K07157 K07157; uncharacterized protein
D BMS_3161 conserved hypothetical protein K07164 K07164; uncharacterized protein
D BMS_2611 conserved hypothetical protein K08998 K08998; uncharacterized protein
D BMS_3228 putative putative secreted protein K09005 K09005; uncharacterized protein
D BMS_2683 conserved hypothetical protein K09005 K09005; uncharacterized protein
D BMS_0930 conserved hypothetical protein K09117 K09117; uncharacterized protein
D BMS_0696 conserved hypothetical protein K09131 K09131; uncharacterized protein
D BMS_1585 conserved hypothetical protein K09160 K09160; uncharacterized protein
D BMS_0247 hypothetical protein K09763 K09763; uncharacterized protein
D BMS_2815 yaiI; conserved hypothetical protein K09768 K09768; uncharacterized protein
D BMS_1501 putative stress response protein K09786 K09786; uncharacterized protein
D BMS_2427 putative membrane protein K09790 K09790; uncharacterized protein
D BMS_1397 putative membrane protein K09792 K09792; uncharacterized protein
D BMS_2259 putative periplasmic protein K05952 K05952; uncharacterized protein
D BMS_0898 conserved hypothetical protein K00243 K00243; uncharacterized protein
D BMS_1839 yaaA; Hypothetical UPF0246 protein yaaA K09861 K09861; uncharacterized protein
D BMS_0611 yacG; conserved hypothetical protein K09862 K09862; uncharacterized protein
D BMS_0986 yecM; conserved hypothetical protein K09907 K09907; uncharacterized protein
D BMS_2429 conserved hypothetical protein K09919 K09919; uncharacterized protein
!
#
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 29, 2024