+D GENES KO
#
KEGG Orthology (KO) - Burkholderia pseudomallei HBPUB10134a
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:bpsh00010]
D DR55_1906 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DR55_2528 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DR55_5776 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D DR55_1962 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DR55_322 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DR55_3400 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DR55_1564 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DR55_324 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DR55_638 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DR55_1615 histidine phosphatase super family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DR55_2251 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DR55_5237 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DR55_323 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DR55_2445 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DR55_2220 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DR55_3557 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DR55_2221 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_300 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DR55_5789 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_5817 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_2734 iron-containing alcohol dehydrogenase family protein K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DR55_899 zinc-binding dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DR55_374 cytochrome c family protein K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_1136 acoD; acetaldehyde dehydrogenase 2 K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D DR55_4964 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_4734 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_3216 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_1552 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D DR55_3862 HAD hydrolase, IA, variant 3 family protein K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10]
D DR55_1853 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DR55_3275 phosphoenolpyruvate carboxykinase family protein K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
C 00020 Citrate cycle (TCA cycle) [PATH:bpsh00020]
D DR55_231 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1]
D DR55_3553 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DR55_3542 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DR55_222 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DR55_3017 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DR55_3016 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_340 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DR55_341 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DR55_4838 succinate CoA transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D DR55_3550 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DR55_3551 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DR55_5469 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DR55_3548 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DR55_3549 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DR55_4967 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DR55_2044 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DR55_3546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DR55_3275 phosphoenolpyruvate carboxykinase family protein K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D DR55_2220 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DR55_3557 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DR55_2221 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:bpsh00030]
D DR55_2528 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DR55_1908 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DR55_1907 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D DR55_26 lactonase, 7-bladed beta-propeller family protein K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31]
D DR55_3516 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DR55_1459 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DR55_1563 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DR55_2357 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DR55_2358 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DR55_39 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D DR55_2976 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DR55_5103 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DR55_5769 deoC; deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D DR55_4482 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D DR55_2932 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D DR55_1853 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DR55_1658 phnN; phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23]
D DR55_557 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DR55_1584 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12]
D DR55_1585 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D DR55_4356 FAD binding domain protein K19813 gdh; glucose dehydrogenase [EC:1.1.5.9]
D DR55_5336 strictosidine synthase family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DR55_2693 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D DR55_2057 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D DR55_1587 carbohydrate kinase, thermoresistant glucokinase family protein K00851 idnK; gluconokinase [EC:2.7.1.12]
D DR55_2654 pfkB carbohydrate kinase family protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D DR55_2691 pfkB carbohydrate kinase family protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D DR55_322 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DR55_1962 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DR55_5776 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:bpsh00040]
D DR55_5933 cupin domain protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D DR55_4552 SAF domain protein K16849 uxaA1; altronate dehydratase small subunit [EC:4.2.1.7]
D DR55_4551 hypothetical protein K16850 uxaA2; altronate dehydratase large subunit [EC:4.2.1.7]
D DR55_3796 D-mannonate dehydratase K08323 rspA; mannonate dehydratase [EC:4.2.1.8]
D DR55_3798 mannitol dehydrogenase Rossmann domain protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D DR55_3795 zinc-binding dehydrogenase family protein K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380]
D DR55_5905 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DR55_1999 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DR55_1749 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3092 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3588 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_1459 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DR55_2888 hypothetical protein K24707 E2.7.1.16; ribulokinase [EC:2.7.1.16]
D DR55_5695 hypothetical protein K00854 xylB; xylulokinase [EC:2.7.1.17]
D DR55_4054 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D DR55_281 xylB; xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D DR55_302 hypothetical protein K00854 xylB; xylulokinase [EC:2.7.1.17]
D DR55_280 mannitol dehydrogenase Rossmann domain protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D DR55_4057 D-xylulose reductase K05351 E1.1.1.9; D-xylulose reductase [EC:1.1.1.9]
D DR55_1551 short chain dehydrogenase family protein K22185 xylB; D-xylose 1-dehydrogenase [EC:1.1.1.175]
D DR55_5018 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D DR55_5337 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D DR55_179 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:bpsh00051]
D DR55_293 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DR55_766 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DR55_1708 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DR55_5903 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DR55_489 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DR55_1853 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DR55_3581 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DR55_179 hypothetical protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D DR55_4547 short chain dehydrogenase family protein K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D DR55_4550 amidohydrolase family protein K07046 E3.1.1.120; L-fucono-1,5-lactonase [EC:3.1.1.120]
D DR55_4549 short chain dehydrogenase family protein K18335 E1.1.1.434; 2-dehydro-3-deoxy-L-fuconate 4-dehydrogenase [EC:1.1.1.434]
D DR55_4548 ureidoglycolate lyase K18336 lra6; 2,4-didehydro-3-deoxy-L-rhamnonate hydrolase [EC:3.7.1.26]
D DR55_5776 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D DR55_1962 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DR55_294 polS; sorbitol dehydrogenase K08261 E1.1.99.21; D-sorbitol dehydrogenase (acceptor) [EC:1.1.99.21]
D DR55_280 mannitol dehydrogenase Rossmann domain protein K00007 dalD; D-arabinitol 4-dehydrogenase [EC:1.1.1.11]
D DR55_322 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DR55_3400 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DR55_2728 dak; bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D DR55_4809 hypothetical protein K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D DR55_3579 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D DR55_1721 3-beta hydroxysteroid dehydrogenase/isomerase family protein K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D DR55_5103 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DR55_643 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
C 00052 Galactose metabolism [PATH:bpsh00052]
D DR55_1552 aldose 1-epimerase family protein K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D DR55_1849 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DR55_1749 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3092 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3588 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_1853 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DR55_1906 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DR55_5652 melibiase family protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D DR55_5776 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D DR55_292 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ
D DR55_3177 cytolethal distending toxin A/C family protein K04618 GAOA; galactose oxidase [EC:1.1.3.9]
D DR55_394 hypothetical protein K01684 dgoD; galactonate dehydratase [EC:4.2.1.6]
D DR55_1545 2-keto-3-deoxy-galactonokinase family protein K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58]
D DR55_1546 KDPG and KHG aldolase family protein K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21]
C 00053 Ascorbate and aldarate metabolism [PATH:bpsh00053]
D DR55_5905 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DR55_1999 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DR55_5336 strictosidine synthase family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_912 garL; 5-keto-4-deoxy-D-glucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20]
D DR55_4567 SMP-30/Gluconolaconase/LRE-like region family protein K13874 araB; L-arabinonolactonase [EC:3.1.1.15]
D DR55_5018 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D DR55_5337 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:bpsh00500]
D DR55_4808 lsdA; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D DR55_1749 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3092 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3588 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3614 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DR55_3697 bcsA; cellulose synthase catalytic subunit UDP-forming K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D DR55_4934 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D DR55_3196 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DR55_3195 treS; trehalose synthase K05343 treS; maltose alpha-D-glucosyltransferase / alpha-amylase [EC:5.4.99.16 3.2.1.1]
D DR55_5219 cga; glucoamylase K01178 SGA1; glucoamylase [EC:3.2.1.3]
D DR55_3199 malQ; 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D DR55_3194 alpha amylase, catalytic domain protein K16147 glgE; starch synthase (maltosyl-transferring) [EC:2.4.99.16]
D DR55_3197 glgX; glycogen debranching enzyme GlgX K01214 ISA; isoamylase [EC:3.2.1.68]
D DR55_3200 treY; malto-oligosyltrehalose synthase K06044 treY; (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase [EC:5.4.99.15]
D DR55_3198 treZ; malto-oligosyltrehalose trehalohydrolase K01236 treZ; maltooligosyltrehalose trehalohydrolase [EC:3.2.1.141]
D DR55_90 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D DR55_2109 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D DR55_2108 otsB; trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12]
D DR55_4679 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D DR55_1853 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DR55_1906 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DR55_2528 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DR55_293 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DR55_766 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:bpsh00520]
D DR55_2857 carbohydrate binding domain protein K01183 E3.2.1.14; chitinase [EC:3.2.1.14]
D DR55_3127 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DR55_2092 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DR55_580 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D DR55_581 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D DR55_584 nagA; N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D DR55_1185 putative N-acetylglucosamine kinase K18676 gspK; glucosamine kinase [EC:2.7.1.8]
D DR55_293 hypothetical protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DR55_766 pfkB carbohydrate kinase family protein K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D DR55_583 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_3288 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_5715 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_774 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_3239 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D DR55_773 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DR55_1612 anmK; anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D DR55_1986 gph; phosphoglycolate phosphatase, bacterial K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105]
D DR55_436 phosphotransferase enzyme family protein K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221]
D DR55_437 nucleotidyl transferase family protein K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99]
D DR55_1361 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DR55_4348 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DR55_252 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DR55_5708 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DR55_2587 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D DR55_2584 polysaccharide deacetylase family protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D DR55_5486 3-beta hydroxysteroid dehydrogenase/isomerase family protein K08678 UXS1; UDP-glucuronate decarboxylase [EC:4.1.1.35]
D DR55_1906 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DR55_1853 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DR55_1749 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3092 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3588 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_5905 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DR55_1999 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DR55_1849 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DR55_643 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DR55_2528 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DR55_1708 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DR55_5903 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DR55_489 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DR55_3581 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DR55_1721 3-beta hydroxysteroid dehydrogenase/isomerase family protein K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D DR55_3579 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D DR55_4931 perosamine synthetase domain protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D DR55_4934 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D DR55_4933 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D DR55_4932 ddhC; CDP-4-keto-6-deoxy-D-glucose-3-dehydrase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D DR55_189 2Fe-2S iron-sulfur cluster binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
C 00620 Pyruvate metabolism [PATH:bpsh00620]
D DR55_4964 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_4734 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_3216 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_2220 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DR55_3557 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DR55_2221 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5931 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D DR55_5789 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_5817 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_2734 iron-containing alcohol dehydrogenase family protein K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DR55_300 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DR55_899 zinc-binding dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DR55_374 cytochrome c family protein K22474 adhB; alcohol dehydrogenase (quinone), cytochrome c subunit [EC:1.1.5.5]
D DR55_5777 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DR55_5778 phosphate acetyl/butaryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DR55_5237 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DR55_323 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DR55_2338 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DR55_1533 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DR55_5164 biotin-requiring enzyme family protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DR55_1532 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DR55_5165 D-ala D-ala ligase family protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DR55_3573 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DR55_5572 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_1136 acoD; acetaldehyde dehydrogenase 2 K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-]
D DR55_4838 succinate CoA transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D DR55_3715 FMN-dependent dehydrogenase family protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D DR55_5604 nitronate monooxygenase family protein K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3]
D DR55_370 thiamine pyrophosphate enzyme, central domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D DR55_3634 thiamine pyrophosphate enzyme, central domain protein K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1]
D DR55_1784 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D DR55_3962 FAD binding domain protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D DR55_1676 FAD binding domain protein K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4]
D DR55_430 gloA; lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D DR55_3253 gloB; hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DR55_1224 metallo-beta-lactamase superfamily protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D DR55_751 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D DR55_2693 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D DR55_2057 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D DR55_1557 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DR55_1249 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DR55_3546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DR55_4967 hydrolyase, tartrate alpha subunit/fumarate, Fe-S type domain protein K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D DR55_2044 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D DR55_118 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D DR55_3275 phosphoenolpyruvate carboxykinase family protein K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32]
D DR55_2445 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DR55_2392 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_3408 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DR55_571 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:bpsh00630]
D DR55_2396 aceA; isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D DR55_4964 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_4734 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_3216 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_2392 aceB; malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D DR55_3546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DR55_231 citrate synthase family protein K01647 CS; citrate synthase [EC:2.3.3.1]
D DR55_3553 gltA; citrate (Si)-synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D DR55_3542 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_5819 phbB; acetoacetyl-CoA reductase family protein K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D DR55_2651 phbB-1; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D DR55_1675 FAD binding domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D DR55_1674 FAD binding domain protein K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14]
D DR55_1673 4Fe-4S binding domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D DR55_1000 catalase family protein K03781 katE; catalase [EC:1.11.1.6]
D DR55_5519 catalase family protein K03781 katE; catalase [EC:1.11.1.6]
D DR55_4340 catalase family protein K03781 katE; catalase [EC:1.11.1.6]
D DR55_751 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D DR55_2693 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D DR55_2057 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D DR55_2066 HAD hydrolase, IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DR55_1458 gph; phosphoglycolate phosphatase, bacterial K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D DR55_2184 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_2202 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_4881 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_1760 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DR55_4804 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DR55_1143 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DR55_1145 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_1144 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DR55_2568 gcl; glyoxylate carboligase K01608 gcl; tartronate-semialdehyde synthase [EC:4.1.1.47]
D DR55_2567 hyi; hydroxypyruvate isomerase K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22]
D DR55_2566 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D DR55_5238 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D DR55_2512 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D DR55_5360 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D DR55_1585 eda; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase family protein K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D DR55_4369 oxdD; oxalate decarboxylase oxdD K01569 oxdD; oxalate decarboxylase [EC:4.1.1.2]
D DR55_1979 NADH-dependent formate dehydrogenase delta subunit FdsD family protein K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D DR55_3604 Tat (twin-arginine translocation) pathway signal sequence domain protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DR55_3605 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DR55_1980 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DR55_3606 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DR55_1981 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region family protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DR55_3607 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D DR55_1982 thioredoxin-like [2Fe-2S] ferredoxin family protein K00127 fdoI; formate dehydrogenase subunit gamma
D DR55_3176 alpha/beta hydrolase fold family protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D DR55_272 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D DR55_534 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D DR55_4793 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D DR55_2182 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
C 00640 Propanoate metabolism [PATH:bpsh00640]
D DR55_4964 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_4734 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_3216 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_5777 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DR55_5778 phosphate acetyl/butaryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DR55_5457 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D DR55_5458 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D DR55_5459 bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DR55_2338 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DR55_1533 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DR55_5164 biotin-requiring enzyme family protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DR55_1532 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DR55_5165 D-ala D-ala ligase family protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DR55_3573 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DR55_5073 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D DR55_1869 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DR55_4603 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DR55_341 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DR55_340 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DR55_1085 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_4602 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_4733 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_5154 2-methylcitrate synthase/citrate synthase II family protein K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5]
D DR55_3543 prpD; 2-methylcitrate dehydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D DR55_5575 mmgE/PrpD family protein K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79]
D DR55_5153 acnD; 2-methylisocitrate dehydratase, Fe/S-dependent K20455 acnD; 2-methylcitrate dehydratase (2-methyl-trans-aconitate forming) [EC:4.2.1.117]
D DR55_5152 prpF; putative AcnD-accessory protein PrpF K09788 prpF; 2-methylaconitate isomerase [EC:5.3.3.-]
D DR55_5155 prpB; methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30]
D DR55_3441 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D DR55_4028 iron-containing alcohol dehydrogenase family protein K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-]
C 00650 Butanoate metabolism [PATH:bpsh00650]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_444 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DR55_2539 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DR55_663 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_3131 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D DR55_5931 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D DR55_5779 poly-beta-hydroxybutyrate polymerase family protein K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D DR55_2649 phbC; poly-beta-hydroxybutyrate polymerase K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304]
D DR55_28 phaZ; polyhydroxyalkanoate depolymerase, intracellular family protein K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D DR55_3193 esterase, PHB depolymerase family protein K05973 phaZ; poly(3-hydroxybutyrate) depolymerase [EC:3.1.1.75]
D DR55_5819 phbB; acetoacetyl-CoA reductase family protein K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D DR55_2651 phbB-1; acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36]
D DR55_5360 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83]
D DR55_3550 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DR55_3551 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DR55_5469 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DR55_3548 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DR55_3549 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DR55_5073 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D DR55_5074 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DR55_2769 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DR55_4838 succinate CoA transferase family protein K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18]
D DR55_3113 iron-containing alcohol dehydrogenase family protein K00043 gbd; 4-hydroxybutyrate dehydrogenase [EC:1.1.1.61]
D DR55_752 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DR55_3065 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D DR55_3064 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D DR55_4985 3-hydroxybutyrate dehydrogenase family protein K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D DR55_5354 3-hydroxybutyrate dehydrogenase family protein K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D DR55_1803 phaZ2; D-(-)-3-hydroxybutyrate oligomer hydrolase K07518 E3.1.1.22; hydroxybutyrate-dimer hydrolase [EC:3.1.1.22]
D DR55_5353 putative acetoacetate decarboxylase K01574 adc; acetoacetate decarboxylase [EC:4.1.1.4]
D DR55_4496 zinc-binding dehydrogenase family protein K18369 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D DR55_3413 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_4940 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_5856 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_1139 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_4434 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_3412 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DR55_1018 short chain dehydrogenase family protein K18009 budC; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304]
C 00660 C5-Branched dibasic acid metabolism [PATH:bpsh00660]
D DR55_3413 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_4940 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_5856 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_1139 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_4434 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_3412 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DR55_3633 hypothetical protein K18288 ict-Y; itaconate CoA-transferase [EC:2.8.3.-]
D DR55_341 sucC; succinate-CoA ligase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D DR55_340 sucD; succinate-CoA ligase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D DR55_3632 maoC like domain protein K18290 ich-Y; itaconyl-CoA hydratase [EC:4.2.1.56]
D DR55_3631 hpcH/HpaI aldolase/citrate lyase family protein K18292 E4.1.3.25; (S)-citramalyl-CoA lyase [EC:4.1.3.25]
D DR55_5928 demethylmenaquinone methyltransferase family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D DR55_3561 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DR55_3563 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DR55_3564 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:bpsh00562]
D DR55_747 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_5297 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_4576 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2983 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_3968 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2118 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2329 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DR55_3099 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D DR55_3100 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D DR55_3107 xylose isomerase-like TIM barrel family protein K03335 iolE; inosose dehydratase [EC:4.2.1.44]
D DR55_3106 thiamine pyrophosphate enzyme, central domain protein K03336 iolD; 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing) [EC:3.7.1.22]
D DR55_3108 kduI/IolB family protein K03337 iolB; 5-deoxy-glucuronate isomerase [EC:5.3.1.30]
D DR55_3105 pfkB carbohydrate kinase family protein K03338 iolC; 5-dehydro-2-deoxygluconokinase [EC:2.7.1.92]
D DR55_1085 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_4602 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_4733 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_3400 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:bpsh00190]
D DR55_3397 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D DR55_3396 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D DR55_1443 NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D DR55_3395 nuoC; dehydrogenase, subunit C family protein K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D DR55_3394 nuoD; NADH dehydrogenase (quinone), D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D DR55_3393 nuoE; NADH-quinone oxidoreductase, E subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D DR55_3392 nuoF; NADH oxidoreductase (quinone), F subunit K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D DR55_3391 nuoG; NADH dehydrogenase (quinone), G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D DR55_3390 NADH dehydrogenase family protein K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D DR55_3389 NADH-quinone oxidoreductase, chain I family protein K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D DR55_3388 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 family protein K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D DR55_3387 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L family protein K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D DR55_3386 proton-translocating NADH-quinone oxidoreductase, chain L family protein K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D DR55_3385 proton-translocating NADH-quinone oxidoreductase, chain M family protein K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D DR55_3384 proton-translocating NADH-quinone oxidoreductase, chain N family protein K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D DR55_3494 FAD dependent oxidoreductase family protein K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D DR55_3550 sdhA; succinate dehydrogenase, flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D DR55_3551 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DR55_5469 succinate dehydrogenase and fumarate reductase iron-sulfur family protein K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D DR55_3548 sdhC; succinate dehydrogenase, cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D DR55_3549 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D DR55_1379 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D DR55_1380 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DR55_1381 cytochrome C1 family protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D DR55_619 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DR55_2140 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D DR55_5841 cyoD; cytochrome o ubiquinol oxidase subunit IV K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV
D DR55_624 cytochrome c oxidase subunit III family protein K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D DR55_627 ctaD; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D DR55_3343 cytochrome C and Quinol oxidase polypeptide I family protein K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D DR55_5282 ctaD; cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D DR55_372 ctaD; cytochrome c oxidase, subunit I K15408 coxAC; cytochrome c oxidase subunit I+III [EC:7.1.1.9]
D DR55_628 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D DR55_2570 cytochrome C oxidase subunit II, periplasmic domain protein K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D DR55_371 coxB; cytochrome c oxidase, subunit II K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D DR55_3344 cytochrome C oxidase subunit II, periplasmic domain protein K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D DR55_626 cytochrome c oxidase assembly CtaG/Cox11 family protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D DR55_620 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DR55_2141 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D DR55_5840 cyoC; cytochrome o ubiquinol oxidase, subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III
D DR55_2142 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D DR55_5839 cyoB; cytochrome o ubiquinol oxidase, subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3]
D DR55_2143 cyoA; ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D DR55_5838 cyoA; ubiquinol oxidase, subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3]
D DR55_5123 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DR55_3898 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DR55_576 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DR55_5124 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DR55_3899 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DR55_577 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DR55_2707 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D DR55_579 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D DR55_1230 ph_c-552; cytochrome c K08738 CYC; cytochrome c
D DR55_163 cyt; cytochrome c-552 K08738 CYC; cytochrome c
D DR55_1107 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DR55_5787 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DR55_1109 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DR55_5780 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DR55_1108 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DR55_5788 ATP synthase family protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DR55_1106 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DR55_1110 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DR55_5781 ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DR55_1103 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DR55_5784 ATP synthase A chain family protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DR55_1105 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DR55_5786 ATP synthase delta (OSCP) subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DR55_1104 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DR55_5785 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DR55_111 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D DR55_3231 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DR55_4003 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms [PATH:bpsh00710]
D DR55_324 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DR55_1564 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DR55_322 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DR55_1962 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DR55_1563 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DR55_2357 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DR55_2358 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DR55_2976 rpiA; ribose 5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6]
D DR55_5103 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D DR55_3400 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DR55_1459 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D DR55_118 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D DR55_1557 malic enzyme, NAD binding domain protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DR55_1249 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D DR55_3546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:bpsh00680]
D DR55_4806 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D DR55_300 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DR55_299 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12]
D DR55_3604 Tat (twin-arginine translocation) pathway signal sequence domain protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DR55_3605 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DR55_1980 formate dehydrogenase, alpha subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D DR55_3606 fdxH; formate dehydrogenase, beta subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DR55_1981 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region family protein K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D DR55_3607 formate dehydrogenase, gamma subunit K00127 fdoI; formate dehydrogenase subunit gamma
D DR55_1982 thioredoxin-like [2Fe-2S] ferredoxin family protein K00127 fdoI; formate dehydrogenase subunit gamma
D DR55_1979 NADH-dependent formate dehydrogenase delta subunit FdsD family protein K00126 fdsD; formate dehydrogenase subunit delta [EC:1.17.1.9]
D DR55_1760 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DR55_4804 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DR55_2251 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DR55_118 phosphoenolpyruvate carboxylase family protein K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D DR55_3546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DR55_2728 dak; bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D DR55_322 fba; fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D DR55_1962 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DR55_5776 hexose kinase, 1-phosphofructokinase family protein K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11]
D DR55_5777 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D DR55_5778 phosphate acetyl/butaryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DR55_4964 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_4734 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_3216 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_2445 ppsA; phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2]
D DR55_638 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DR55_1615 histidine phosphatase super family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DR55_3352 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DR55_929 putative d-3-phosphoglycerate dehydrogenase oxidoreductase protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DR55_2361 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_1991 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_2658 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:bpsh00910]
D DR55_1589 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_2212 narK; nitrite transporter family protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_2213 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_4047 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_4173 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_2211 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DR55_4168 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DR55_2210 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DR55_4169 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DR55_2208 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DR55_4171 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DR55_568 molybdopterin oxidoreductase family protein K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-]
D DR55_566 nirB; nitrite reductase [NAD(P)H], large subunit K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4]
D DR55_567 nirD; nitrite reductase [NAD(P)H], small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4]
D DR55_4048 nirB; nitrite reductase [NAD(P)H], large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15]
D DR55_4049 nirD; nitrite reductase [NAD(P)H], small subunit K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15]
D DR55_3823 multicopper oxidase family protein K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D DR55_3787 nirK; nitrite reductase, copper-containing K00368 nirK; nitrite reductase (NO-forming) [EC:1.7.2.1]
D DR55_2169 cytochrome C and Quinol oxidase polypeptide I family protein K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D DR55_3824 cytochrome C and Quinol oxidase polypeptide I family protein K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D DR55_3826 norB; nitric oxide reductase domain protein K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5]
D DR55_2722 nosZ; nitrous-oxide reductase, TAT-dependent K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4]
D DR55_1216 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D DR55_758 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D DR55_2666 nitronate monooxygenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D DR55_2158 dihydroorotate dehydrogenase family protein K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D DR55_1591 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D DR55_2184 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_2202 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_4881 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_1343 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DR55_1344 gltD; glutamate synthase, NADH/NADPH, small subunit domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DR55_1566 cynS; cyanate hydratase K01725 cynS; cyanate lyase [EC:4.2.1.104]
D DR55_2838 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D DR55_713 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D DR55_3406 carbonic anhydrase family protein K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
D DR55_1567 cynT; carbonic anhydrase 1 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:bpsh00920]
D DR55_733 sbp; sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D DR55_2941 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DR55_2940 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DR55_2939 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DR55_2938 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DR55_3701 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D DR55_3703 binding--dependent transport system inner membrane component family protein K15552 tauC; taurine transport system permease protein
D DR55_3702 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D DR55_3700 taurine catabolism dioxygenase TauD, TfdA family protein K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D DR55_3350 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_4408 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_1037 bacterial extracellular solute-binding s, 3 family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_2926 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_2961 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DR55_2923 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DR55_1035 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DR55_2960 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DR55_2924 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DR55_1036 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DR55_2962 ssuD; alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34]
D DR55_3848 NADPH-dependent FMN reductase family protein K00299 ssuE; FMN reductase [EC:1.5.1.38]
D DR55_171 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D DR55_2363 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DR55_172 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DR55_2347 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DR55_2781 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DR55_2172 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DR55_5808 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DR55_173 adenylylsulfate reductase, thioredoxin dependent family protein K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D DR55_5429 molybdopterin oxidoreductase Fe4S4 domain protein K21307 soeA; sulfite dehydrogenase (quinone) subunit SoeA [EC:1.8.5.6]
D DR55_5428 4Fe-4S dicluster domain protein K21308 soeB; sulfite dehydrogenase (quinone) subunit SoeB
D DR55_5427 DMSO reductase anchor subunit family protein K21309 soeC; sulfite dehydrogenase (quinone) subunit SoeC
D DR55_4050 FAD binding domain protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D DR55_3811 flavodoxin family protein K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D DR55_3281 nitrite and sulphite reductase 4Fe-4S domain protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D DR55_175 nitrite and sulphite reductase 4Fe-4S domain protein K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2]
D DR55_2675 FAD dependent oxidoreductase family protein K17218 sqr; sulfide:quinone oxidoreductase [EC:1.8.5.4]
D DR55_3497 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DR55_2331 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DR55_5333 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DR55_3935 bacterial transferase hexapeptide family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DR55_894 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D DR55_3578 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D DR55_4726 sfnG; dimethyl sulfone monooxygenase SfnG K17228 sfnG; dimethylsulfone monooxygenase [EC:1.14.14.35]
D DR55_2538 AMP-binding enzyme family protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D DR55_4616 AMP-binding enzyme family protein K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44]
D DR55_2012 hypothetical protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
D DR55_445 hypothetical protein K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:bpsh00061]
D DR55_2338 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D DR55_1533 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DR55_5164 biotin-requiring enzyme family protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D DR55_1532 accC; acetyl-CoA carboxylase, biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DR55_5165 D-ala D-ala ligase family protein K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D DR55_3573 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D DR55_2077 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DR55_1176 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D DR55_2075 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DR55_3263 mdcH; malonate decarboxylase, epsilon subunit K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DR55_4868 pqsD; PQB biosynthetic 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DR55_2074 fabH; 3-oxoacyl-(Acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DR55_1175 fabH; 3-oxoacyl-(Acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DR55_1177 fabH; 3-oxoacyl-(Acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DR55_2078 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DR55_4032 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_3443 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_2076 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_4470 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_113 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_2435 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DR55_2375 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DR55_4625 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DR55_3131 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D DR55_1476 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_2990 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_5685 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_256 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:bpsh00071]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_443 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_444 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DR55_2539 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DR55_663 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DR55_480 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_5692 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_3375 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_597 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_5880 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_1011 hypothetical protein K00255 ACADL; long-chain-acyl-CoA dehydrogenase [EC:1.3.8.8]
D DR55_1771 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DR55_1476 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_2990 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_5685 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_256 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_2170 fatty acid desaturase family protein K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D DR55_4430 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D DR55_300 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DR55_5789 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_5817 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_2734 iron-containing alcohol dehydrogenase family protein K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis [PATH:bpsh00100]
D DR55_5128 squalene/phytoene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:bpsh00561]
D DR55_5238 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D DR55_2512 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_899 zinc-binding dehydrogenase family protein K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D DR55_2728 dak; bifunctional ATP-dependent dihydroxyacetone kinase/FAD-AMP lyase K00863 DAK; triose/dihydroxyacetone kinase / FAD-AMP lyase (cyclizing) [EC:2.7.1.28 2.7.1.29 4.6.1.15]
D DR55_5097 dak1 domain protein K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121]
D DR55_5096 dhaL; dihydroxyacetone kinase, L subunit K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121]
D DR55_406 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DR55_2073 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DR55_254 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DR55_1831 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DR55_428 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DR55_3420 prokaryotic diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D DR55_5406 lip; lipase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D DR55_3524 lipA; lipoyl synthase K01046 lip; triacylglycerol lipase [EC:3.1.1.3]
D DR55_2006 lipase family protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D DR55_5652 melibiase family protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:bpsh00564]
D DR55_634 NAD-dependent glycerol-3-phosphate dehydrogenase family protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D DR55_405 FAD dependent oxidoreductase family protein K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
D DR55_254 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DR55_1831 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DR55_428 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DR55_3420 prokaryotic diacylglycerol kinase family protein K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D DR55_747 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_5297 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_4576 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2983 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_3968 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2118 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_1340 ugpQ; glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D DR55_1439 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D DR55_1807 glycerophosphoryl diester phosphodiesterase family protein K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D DR55_1133 ethanolamine ammonia lyase large subunit family protein K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D DR55_1134 ethanolamine ammonia-lyase light chain family protein K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D DR55_1985 hypothetical protein K00570 pmtA; phosphatidylethanolamine/phosphatidyl-N-methylethanolamine N-methyltransferase [EC:2.1.1.17 2.1.1.71]
D DR55_2429 cytidylyltransferase family protein K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D DR55_3409 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DR55_3410 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DR55_5470 phosphatidylserine decarboxylase family protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D DR55_1555 phosphatidylglycerophosphatase A family protein K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D DR55_2410 cls; cardiolipin synthase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D DR55_447 phospholipase D family protein K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D DR55_5852 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-]
D DR55_2097 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
D DR55_747 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_5297 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_4576 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2983 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_3968 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2118 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 00600 Sphingolipid metabolism [PATH:bpsh00600]
D DR55_5696 putative sphingosine-1-phosphate lyase K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
D DR55_5700 putative sphingosine-1-phosphate lyase K01634 SGPL1; sphinganine-1-phosphate aldolase [EC:4.1.2.27]
D DR55_2122 glycosyl transferase 2 family protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D DR55_796 glycosyl transferase 2 family protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D DR55_5652 melibiase family protein K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D DR55_580 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:bpsh00592]
D DR55_443 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:bpsh01040]
D DR55_5681 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DR55_5684 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DR55_206 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DR55_2526 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DR55_439 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:bpsh00230]
D DR55_3382 NUDIX domain protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DR55_1853 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DR55_557 prs; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D DR55_3577 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DR55_3446 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D DR55_209 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DR55_23 purT; phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D DR55_2531 purL; phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D DR55_1701 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D DR55_319 purK; phosphoribosylaminoimidazole carboxylase, ATPase subunit K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D DR55_320 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D DR55_321 purC; phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D DR55_1588 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DR55_1621 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DR55_537 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DR55_2617 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DR55_2648 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DR55_1518 phosphoribosyl transferase domain protein K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D DR55_2455 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DR55_2625 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DR55_1938 rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D DR55_1791 xdhA; xanthine dehydrogenase, small subunit K13481 xdhA; xanthine dehydrogenase small subunit [EC:1.17.1.4]
D DR55_1792 xdhB; xanthine dehydrogenase, molybdopterin binding subunit K13482 xdhB; xanthine dehydrogenase large subunit [EC:1.17.1.4]
D DR55_1074 peptidase C26 family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DR55_2457 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DR55_1968 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3]
D DR55_1941 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D DR55_1523 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DR55_5447 ribonucleotide reductase, barrel domain protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DR55_4872 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DR55_1524 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DR55_2165 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DR55_1335 dgt; dGTPase family protein K01129 dgt; dGTPase [EC:3.1.5.1]
D DR55_1943 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DR55_3230 ppx/GppA phosphatase family protein K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D DR55_3056 RelA/SpoT family protein K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5]
D DR55_389 response regulator K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D DR55_2639 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DR55_1528 pfkB carbohydrate kinase family protein K00856 ADK; adenosine kinase [EC:2.7.1.20]
D DR55_3486 amn; AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4]
D DR55_1970 add; adenosine deaminase K21053 ade; adenine deaminase [EC:3.5.4.2]
D DR55_684 cpdB; 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D DR55_245 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DR55_3303 calcineurin-like phosphoesterase family protein K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]
D DR55_1832 apaH; apaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41]
D DR55_2347 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DR55_2781 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DR55_2172 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DR55_5808 cysC; adenylylsulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25]
D DR55_171 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D DR55_2363 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DR55_172 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DR55_2473 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D DR55_2468 uraD; OHCU decarboxylase K13485 PRHOXNB; 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [EC:4.1.1.97]
D DR55_2466 asp/Glu/Hydantoin racemase family protein K16841 hpxA; allantoin racemase [EC:5.1.99.3]
D DR55_2792 amidohydrolase family protein K01466 allB; allantoinase [EC:3.5.2.5]
D DR55_2467 polysaccharide deacetylase family protein K16842 hpxB; allantoinase [EC:3.5.2.5]
D DR55_1571 alc; allantoicase K01477 alc; allantoicase [EC:3.5.3.4]
D DR55_2469 alc; allantoicase K01477 alc; allantoicase [EC:3.5.3.4]
D DR55_1572 ureidoglycolate hydrolase family protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D DR55_2471 ureidoglycolate hydrolase family protein K01483 allA; ureidoglycolate lyase [EC:4.3.2.3]
D DR55_5603 ureidoglycolate lyase K16856 ugl; ureidoglycolate lyase [EC:4.3.2.3]
D DR55_1860 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DR55_1861 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DR55_1862 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D DR55_2838 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
C 00240 Pyrimidine metabolism [PATH:bpsh00240]
D DR55_3246 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DR55_3248 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DR55_4088 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DR55_1829 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DR55_1603 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DR55_1830 pyrC; dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D DR55_2971 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D DR55_1248 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D DR55_1553 pyrF; orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D DR55_2426 pyrH; UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D DR55_2625 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DR55_3451 maf; septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D DR55_2249 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D DR55_1994 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D DR55_2617 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DR55_3444 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D DR55_1828 phosphoribosyl transferase domain protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DR55_684 cpdB; 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase bifunctional periplasmic protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D DR55_5773 cdd; cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D DR55_4584 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D DR55_2165 nrdD; anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D DR55_129 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D DR55_1523 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DR55_5447 ribonucleotide reductase, barrel domain protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DR55_4872 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DR55_1524 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D DR55_2551 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D DR55_214 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DR55_5772 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4]
D DR55_2040 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DR55_4221 thymidylate synthase family protein K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DR55_56 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D DR55_2793 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D DR55_1759 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D DR55_4446 nitroreductase family protein K09019 rutE; 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:bpsh00250]
D DR55_203 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DR55_2563 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DR55_3973 iaaA; isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DR55_5199 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DR55_4673 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DR55_411 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DR55_2592 aminotransferase class-V family protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DR55_4238 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DR55_2813 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DR55_788 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DR55_125 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2807 ATP-grasp domain protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2812 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2366 D-ala D-ala ligase family protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2639 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D DR55_1588 purB; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D DR55_4088 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DR55_1829 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D DR55_5073 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D DR55_5074 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DR55_2769 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DR55_1343 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DR55_1344 gltD; glutamate synthase, NADH/NADPH, small subunit domain protein K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D DR55_1591 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D DR55_1117 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DR55_2184 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_2202 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_4881 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_3246 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D DR55_3248 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D DR55_4724 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D DR55_583 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_3288 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_5715 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_774 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_3577 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:bpsh00260]
D DR55_2340 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DR55_3566 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DR55_2593 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DR55_3484 thrB; homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39]
D DR55_2594 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D DR55_5121 ltaE; low specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D DR55_2806 ltaA; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D DR55_1760 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DR55_4804 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DR55_751 ghrA; glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81]
D DR55_2693 ghrB; glyoxylate/hydroxypyruvate reductase B K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D DR55_2057 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215]
D DR55_5238 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D DR55_2512 glycerate kinase family protein K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D DR55_638 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DR55_1615 histidine phosphatase super family protein K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DR55_3352 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DR55_929 putative d-3-phosphoglycerate dehydrogenase oxidoreductase protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DR55_2361 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_1991 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_2658 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D DR55_1759 ydfG; NADP-dependent 3-hydroxy acid dehydrogenase YdfG K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D DR55_5366 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DR55_5365 tdh; L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103]
D DR55_1143 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DR55_1145 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_1144 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D DR55_3409 pssA; CDP-diacylglycerol-serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D DR55_3924 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1]
D DR55_3925 betB; betaine aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8]
D DR55_4797 ring hydroxylating alpha subunit family protein K00479 gbcA; glycine betaine monooxygenase A [EC:1.14.13.251]
D DR55_4796 2Fe-2S iron-sulfur cluster binding domain protein K21832 gbcB; glycine betaine monooxygenase B [EC:1.14.13.251]
D DR55_4801 flavin oxidoreductase / NADH oxidase family protein K21833 dgcA; N,N-dimethylglycine/sarcosine dehydrogenase [EC:1.5.7.3]
D DR55_4800 4Fe-4S dicluster domain protein K21834 dgcB; N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
D DR55_4799 electron transfer flavodomain protein K25960 etfA; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit alpha
D DR55_4798 electron transfer flavodomain protein K25961 etfB; N,N-dimethylglycine/sarcosine catabolism electron transfer flavoprotein subunit beta
D DR55_3909 sarcosine oxidase, alpha subunit K00302 soxA; sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
D DR55_3907 sarcosine oxidase, beta subunit K00303 soxB; sarcosine oxidase, subunit beta [EC:1.5.3.24 1.5.3.1]
D DR55_3910 sarcosine oxidase, gamma subunit K00305 soxG; sarcosine oxidase, subunit gamma [EC:1.5.3.24 1.5.3.1]
D DR55_3908 soxD; subunit delta of sarcosine oxidase K00304 soxD; sarcosine oxidase, subunit delta [EC:1.5.3.24 1.5.3.1]
D DR55_3906 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DR55_1141 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DR55_4006 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DR55_460 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DR55_2484 psdht; phenylserine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DR55_465 putative D-serine deaminase (D-serine dehydratase) protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D DR55_5614 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D DR55_3572 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DR55_3570 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DR55_604 2,4-diaminobutyrate 4-transaminase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D DR55_3635 2,4-diaminobutyrate 4-transaminase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
C 00270 Cysteine and methionine metabolism [PATH:bpsh00270]
D DR55_2331 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DR55_5333 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DR55_3935 bacterial transferase hexapeptide family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DR55_2657 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DR55_699 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DR55_700 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DR55_1964 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D DR55_878 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DR55_1562 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D DR55_4176 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D DR55_4451 autoinducer synthetase family protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D DR55_4147 autoinducer synthetase family protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D DR55_3705 autoinducer synthetase family protein K20250 cciI; acyl homoserine lactone synthase [EC:2.3.1.184]
D DR55_3089 mtnN; MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D DR55_2648 hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D DR55_5534 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4984 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4531 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4423 aminotransferase class I and II family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D DR55_2101 GAF domain protein K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D DR55_525 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DR55_1211 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DR55_3956 1-aminocyclopropane-1-carboxylate deaminase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D DR55_2340 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DR55_3566 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DR55_2593 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DR55_894 metX; homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D DR55_5172 O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D DR55_3578 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D DR55_327 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_5929 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_645 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DR55_955 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DR55_644 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DR55_3497 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DR55_1902 pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family protein K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D DR55_4100 pyridoxal-phosphate dependent enzyme family protein K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D DR55_3546 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D DR55_3906 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DR55_1141 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D DR55_2003 cysM; cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D DR55_3352 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DR55_929 putative d-3-phosphoglycerate dehydrogenase oxidoreductase protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DR55_2361 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_1991 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_2808 pyridoxal-phosphate dependent enzyme family protein K22847 cysK2; S-sulfo-L-cysteine synthase (3-phospho-L-serine-dependent) [EC:2.8.5.1]
C 00280 Valine, leucine and isoleucine degradation [PATH:bpsh00280]
D DR55_327 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_5929 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_5457 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D DR55_5458 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D DR55_5459 bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_480 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_5692 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_3375 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_597 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_5880 hypothetical protein K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7]
D DR55_3828 hypothetical protein K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DR55_443 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D DR55_5467 ketopantoate reductase PanE/ApbA family protein K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D DR55_4732 mmsB; 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D DR55_1085 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_4602 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_4733 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_1869 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DR55_4603 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DR55_3831 D-ala D-ala ligase family protein K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4]
D DR55_3829 carboxyl transferase domain protein K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D DR55_3830 enoyl-CoA hydratase/isomerase family protein K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18]
D DR55_752 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DR55_3065 3-oxoacid CoA-transferase, A subunit K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D DR55_3064 3-oxoacid CoA-transferase, B subunit K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:bpsh00290]
D DR55_4006 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DR55_460 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DR55_2484 psdht; phenylserine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D DR55_3561 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D DR55_3563 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D DR55_3564 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D DR55_3413 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_4940 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_5856 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_1139 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_4434 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_3412 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DR55_3411 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DR55_5043 acetohydroxy acid isomeroreductase, catalytic domain protein K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DR55_162 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DR55_327 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_5929 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_2592 aminotransferase class-V family protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DR55_3408 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D DR55_571 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:bpsh00300]
D DR55_2593 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D DR55_2340 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DR55_3566 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DR55_739 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DR55_2263 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DR55_180 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DR55_1575 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D DR55_2414 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D DR55_190 argD; transaminase, acetylornithine/succinylornithine family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DR55_2415 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D DR55_2412 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DR55_880 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DR55_1325 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DR55_5045 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DR55_594 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DR55_50 aminotransferase class I and II family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D DR55_3808 aminotransferase class I and II family protein K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D DR55_1483 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DR55_1484 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:bpsh00310]
D DR55_3809 aldehyde dehydrogenase family protein K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D DR55_3016 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_1771 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_5041 prr; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D DR55_5074 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DR55_2769 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DR55_3122 coA-transferase III family protein K01041 gcdG; glutaryl-CoA transferase [EC:2.8.3.-]
D DR55_675 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DR55_4777 pyridine nucleotide-disulfide oxidoreductase family protein K26064 amaD; D-lysine oxidase
D DR55_5019 malate/L-lactate dehydrogenase family protein K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21]
D DR55_4394 ornithine cyclodeaminase/mu-crystallin family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_4217 taurine catabolism dioxygenase TauD, TfdA family protein K00471 BBOX1; gamma-butyrobetaine dioxygenase [EC:1.14.11.1]
C 00220 Arginine biosynthesis [PATH:bpsh00220]
D DR55_2837 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DR55_251 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D DR55_2813 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DR55_788 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DR55_125 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2807 ATP-grasp domain protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2812 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2366 D-ala D-ala ligase family protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_5166 allophanate hydrolase subunit 1 family protein K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D DR55_1860 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DR55_1861 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DR55_1862 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
D DR55_2836 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6]
D DR55_4724 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D DR55_2184 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_2202 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_4881 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_1591 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D DR55_2838 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2]
D DR55_2592 aminotransferase class-V family protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DR55_2195 argA; amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1]
D DR55_1498 argJ; glutamate N-acetyltransferase/amino-acid acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D DR55_891 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D DR55_1245 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D DR55_190 argD; transaminase, acetylornithine/succinylornithine family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DR55_2485 argE; acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:bpsh00330]
D DR55_4584 amidohydrolase family protein K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D DR55_128 hypothetical protein K01584 adiA; arginine decarboxylase [EC:4.1.1.19]
D DR55_4877 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D DR55_948 aguB; N-carbamoylputrescine amidase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D DR55_1562 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D DR55_4176 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D DR55_3822 hypothetical protein K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D DR55_2185 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D DR55_4882 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D DR55_5040 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D DR55_4467 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_5041 prr; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D DR55_962 speG; spermidine N(1)-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D DR55_3685 speB; agmatinase K12255 gbuA; guanidinobutyrase [EC:3.5.3.7]
D DR55_3426 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_5419 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_4425 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_1214 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_2132 aruF; arginine/ornithine succinyltransferase, alpha subunit K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D DR55_2133 astA; arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109]
D DR55_2135 astB; succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23]
D DR55_2131 astC; succinylornithine transaminase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D DR55_2134 astD; succinylglutamic semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71]
D DR55_2136 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96]
D DR55_4889 FAD dependent oxidoreductase family protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D DR55_3804 FAD binding domain protein K09471 puuB; gamma-glutamylputrescine oxidase [EC:1.4.3.-]
D DR55_4878 aldehyde dehydrogenase family protein K09472 puuC; 4-(gamma-glutamylamino)butanal dehydrogenase [EC:1.2.1.99]
D DR55_1671 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D DR55_1117 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DR55_1513 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DR55_1581 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D DR55_5160 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D DR55_675 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DR55_4394 ornithine cyclodeaminase/mu-crystallin family protein K19743 lhpI; 1-piperideine-2-carboxylate/1-pyrroline-2-carboxylate reductase [NAD(P)H] [EC:1.5.1.1]
C 00340 Histidine metabolism [PATH:bpsh00340]
D DR55_1362 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D DR55_2638 hisZ; ATP phosphoribosyltransferase, regulatory subunit K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D DR55_1371 hisE; phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D DR55_1370 phosphoribosyl-AMP cyclohydrolase family protein K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19]
D DR55_1368 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D DR55_1367 hisH; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D DR55_1369 hisF; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D DR55_1365 imidazoleglycerol-phosphate dehydratase family protein K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D DR55_2816 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_1364 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_560 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_1363 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D DR55_2787 aromatic amino acid lyase family protein K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D DR55_2176 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D DR55_2789 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D DR55_2178 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D DR55_2180 hutI; imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D DR55_2181 hutF; formiminoglutamate deiminase K05603 hutF; formimidoylglutamate deiminase [EC:3.5.3.13]
D DR55_2182 hutG; N-formylglutamate deformylase K01458 hutG; N-formylglutamate deformylase [EC:3.5.1.68]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_4634 egtD; dimethylhistidine N-methyltransferase K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:bpsh00350]
D DR55_2816 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_1364 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_560 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_5534 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4984 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4531 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_1252 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D DR55_1779 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D DR55_565 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D DR55_1780 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D DR55_695 fumarylacetoacetate (FAA) hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D DR55_3536 melO; tyrosinase K00505 TYR; tyrosinase [EC:1.14.18.1]
D DR55_4468 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D DR55_1021 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D DR55_300 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DR55_5789 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_5817 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_2734 iron-containing alcohol dehydrogenase family protein K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DR55_4655 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase K00455 hpaD; 3,4-dihydroxyphenylacetate 2,3-dioxygenase [EC:1.13.11.15]
D DR55_4656 hpaE; 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase K00151 hpaE; 5-carboxymethyl-2-hydroxymuconic-semialdehyde dehydrogenase [EC:1.2.1.60]
D DR55_4654 5-carboxymethyl-2-hydroxymuconate isomerase family protein K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10]
D DR55_4657 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D DR55_4658 hpaG; 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase K05921 hpaG; 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase [EC:4.1.1.68 5.3.3.-]
D DR55_4653 hpaH; 2-oxo-hepta-3-ene-1,7-dioic acid hydratase K02509 hpaH; 2-oxo-hept-3-ene-1,7-dioate hydratase [EC:4.2.1.-]
D DR55_4651 hpaI; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52]
D DR55_5074 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DR55_2769 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DR55_4313 fumarylacetoacetate (FAA) hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20]
C 00360 Phenylalanine metabolism [PATH:bpsh00360]
D DR55_1081 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D DR55_4468 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D DR55_1021 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D DR55_1463 paaF; phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D DR55_1464 paaD; phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D DR55_1261 phenylacetic acid catabolic family protein K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D DR55_1260 phenylacetic acid degradation B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D DR55_1259 phenylacetic acid catabolic family protein K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D DR55_1258 paaJ; phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D DR55_1257 2Fe-2S iron-sulfur cluster binding domain protein K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D DR55_1465 paaB; phenylacetate degradation putative enoyl-CoA hydratase PaaB K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_2816 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_1364 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_560 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_5534 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4984 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4531 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_5417 acetyltransferase domain protein K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D DR55_5416 acetyltransferase family protein K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-]
D DR55_1252 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D DR55_5208 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D DR55_2013 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D DR55_675 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DR55_1653 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D DR55_3426 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_5419 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_4425 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_1214 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_4442 rieske [2Fe-2S] domain protein K05710 hcaC; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin component
D DR55_4430 pyridine nucleotide-disulfide oxidoreductase family protein K00529 hcaD; 3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase component [EC:1.18.1.3]
D DR55_1776 FAD binding domain protein K05712 mhpA; 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
D DR55_5932 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D DR55_5931 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00380 Tryptophan metabolism [PATH:bpsh00380]
D DR55_274 kynA; tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D DR55_3176 alpha/beta hydrolase fold family protein K01432 AFMID; arylformamidase [EC:3.5.1.9]
D DR55_272 kynB; arylformamidase K07130 kynB; arylformamidase [EC:3.5.1.9]
D DR55_273 kynU; kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D DR55_3016 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_1771 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_3426 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_5419 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_4425 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_1214 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_5601 amidase family protein K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-]
D DR55_1000 catalase family protein K03781 katE; catalase [EC:1.11.1.6]
D DR55_5519 catalase family protein K03781 katE; catalase [EC:1.11.1.6]
D DR55_4340 catalase family protein K03781 katE; catalase [EC:1.11.1.6]
D DR55_1653 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:bpsh00400]
D DR55_3988 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DR55_1680 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DR55_1334 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D DR55_1534 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DR55_5007 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D DR55_5008 xylose isomerase-like TIM barrel family protein K26400 quiC1; 3-dehydroshikimate dehydratase [EC:4.2.1.118]
D DR55_5006 shikimate dehydrogenase substrate binding domain protein K25901 qsuD; quinate/shikimate dehydrogenase (NAD+) [EC:1.1.1.24]
D DR55_1540 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D DR55_1333 shikimate kinase family protein K00891 aroK; shikimate kinase [EC:2.7.1.71]
D DR55_409 EPSP synthase family protein K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DR55_410 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DR55_1993 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D DR55_3072 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D DR55_1457 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DR55_1456 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DR55_1455 trpD; anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D DR55_3569 N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D DR55_1454 indole-3-glycerol phosphate synthase family protein K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D DR55_3572 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D DR55_3570 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D DR55_1952 putative chorismate mutase K04093 pheA1; chorismate mutase [EC:5.4.99.5]
D DR55_1992 pheA; chorismate mutase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D DR55_1113 pheC; cyclohexadienyl dehydratase K01713 pheC; cyclohexadienyl dehydratase [EC:4.2.1.51 4.2.1.91]
D DR55_2816 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_1364 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_560 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_5534 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4984 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4531 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_1081 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:bpsh00410]
D DR55_142 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DR55_5073 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_5041 prr; gamma-aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19]
D DR55_141 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DR55_56 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D DR55_2793 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D DR55_1869 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DR55_4603 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DR55_1085 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_4602 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
D DR55_4733 mmsA; methylmalonate-semialdehyde dehydrogenase K00140 mmsA; malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
C 00430 Taurine and hypotaurine metabolism [PATH:bpsh00430]
D DR55_3995 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_668 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_401 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_3700 taurine catabolism dioxygenase TauD, TfdA family protein K03119 tauD; taurine dioxygenase [EC:1.14.11.17]
D DR55_4238 ald; alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D DR55_5778 phosphate acetyl/butaryl transferase family protein K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D DR55_5777 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:bpsh00440]
D DR55_4742 aepX; phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D DR55_4843 aepX; phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D DR55_4844 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D DR55_4743 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D DR55_4999 phnA; phosphonoacetate hydrolase K19670 phnA; phosphonoacetate hydrolase [EC:3.11.1.2]
D DR55_4745 phnY; putative phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]
D DR55_4998 phnY; putative phosphonoacetaldehyde dehydrogenase K00206 phnY; phosphonoacetaldehyde dehydrogenase [EC:1.2.1.-]
D DR55_4845 2-aminoethylphosphonate aminotransferase family protein K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D DR55_5004 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D DR55_1663 bacterial phosphonate metabolism family protein K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37]
D DR55_1661 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37]
D DR55_1662 phnH; phosphonate C-P lyase system protein PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37]
D DR55_1666 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37]
D DR55_1667 phnM; phosphonate metabolism protein PhnM K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63]
D DR55_1664 phnJ; protein phnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1]
C 00450 Selenocompound metabolism [PATH:bpsh00450]
D DR55_2657 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D DR55_699 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DR55_700 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DR55_1964 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D DR55_4423 aminotransferase class I and II family protein K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D DR55_2149 beta-eliminating lyase family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D DR55_3938 sufS; cysteine desulfurase, SufS family protein K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D DR55_1915 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D DR55_171 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D DR55_2363 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DR55_172 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DR55_5065 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D DR55_3609 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D DR55_133 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:bpsh00460]
D DR55_3614 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D DR55_3995 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_668 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_401 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_2563 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D DR55_3973 iaaA; isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DR55_1760 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DR55_4804 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:bpsh00470]
D DR55_2405 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DR55_4637 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DR55_675 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DR55_1490 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DR55_4724 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D DR55_4969 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DR55_1486 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DR55_465 putative D-serine deaminase (D-serine dehydratase) protein K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D DR55_5614 dsdA; D-serine ammonia-lyase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18]
D DR55_1902 pyridoxal phosphate-dependent enzyme, D-cysteine desulfhydrase family protein K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D DR55_4100 pyridoxal-phosphate dependent enzyme family protein K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15]
D DR55_880 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D DR55_1325 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DR55_5045 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DR55_594 hypothetical protein K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D DR55_5015 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D DR55_5012 FAD binding domain protein K22549 lhpC; D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
D DR55_5014 pyridine nucleotide-disulfide oxidoreductase family protein K21061 lhpB; D-hydroxyproline dehydrogenase subunit beta [EC:1.5.99.-]
D DR55_5013 2Fe-2S iron-sulfur cluster binding domain protein K22550 lhpD; D-hydroxyproline dehydrogenase subunit gamma
D DR55_5016 dihydrodipicolinate synthetase family protein K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D DR55_5018 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D DR55_5337 aldehyde dehydrogenase family protein K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D DR55_5208 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D DR55_2013 ketopantoate reductase PanE/ApbA family protein K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:bpsh00480]
D DR55_3995 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_668 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_401 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_422 chaC-like family protein K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7]
D DR55_832 hypothetical protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D DR55_5163 lamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D DR55_830 allophanate hydrolase subunit 1 family protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9]
D DR55_831 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9]
D DR55_1072 ybdK; carboxylate-amine ligase YbdK K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-]
D DR55_645 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DR55_955 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D DR55_644 gshB; glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3]
D DR55_166 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DR55_1965 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DR55_1414 peptidase M1 family protein K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DR55_2137 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_4711 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_3371 putative gst-related protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_3902 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_5765 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_1626 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_5357 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_825 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_789 gor; glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D DR55_222 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D DR55_3516 gnd; 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D DR55_1908 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DR55_2409 glutathione peroxidase family protein K00432 gpx; glutathione peroxidase [EC:1.11.1.9]
D DR55_1494 ahpC/TSA family protein K24138 prx3; glutaredoxin/glutathione-dependent peroxiredoxin [EC:1.11.1.25 1.11.1.27]
D DR55_1562 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
D DR55_4176 spermine/spermidine synthase family protein K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:bpsh00511]
D DR55_580 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D DR55_483 putative beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
C 00540 Lipopolysaccharide biosynthesis [PATH:bpsh00540]
D DR55_2436 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DR55_1730 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DR55_1495 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DR55_2434 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DR55_2332 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DR55_2437 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DR55_242 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DR55_1748 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DR55_539 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DR55_1746 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DR55_2250 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DR55_1747 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DR55_540 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DR55_244 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DR55_1856 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DR55_879 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DR55_3853 aspartyl/Asparaginyl beta-hydroxylase family protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D DR55_573 lipid A 3-O-deacylase family protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D DR55_1723 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DR55_1228 SIS domain protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DR55_2000 rfaE; bifunctional protein RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D DR55_1725 gmhB; D,D-heptose 1,7-bisphosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DR55_427 HAD hydrolase, family IIIA domain protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DR55_5475 HAD hydrolase, IA, variant 1 family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DR55_689 rfaE; bifunctional protein RfaE K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D DR55_2001 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D DR55_1722 D-glycero-D-manno-heptose 1-phosphate kinase K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D DR55_1724 nucleotidyl transferase family protein K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
D DR55_1854 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DR55_1930 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DR55_329 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DR55_11 glycosyltransferase 9 family protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:bpsh00541]
D DR55_1749 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3092 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_3588 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D DR55_1849 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D DR55_5905 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DR55_1999 nucleotide sugar dehydrogenase family protein K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D DR55_1834 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DR55_1833 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DR55_1835 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DR55_1836 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DR55_4934 rfbF; glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D DR55_4933 rfbG; CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D DR55_4932 ddhC; CDP-4-keto-6-deoxy-D-glucose-3-dehydrase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D DR55_189 2Fe-2S iron-sulfur cluster binding domain protein K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1]
D DR55_1708 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DR55_5903 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DR55_489 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
D DR55_3581 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D DR55_1721 3-beta hydroxysteroid dehydrogenase/isomerase family protein K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D DR55_3579 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22252 tld; GDP-6-deoxy-D-talose 4-dehydrogenase [EC:1.1.1.135]
D DR55_4931 perosamine synthetase domain protein K13010 per; perosamine synthetase [EC:2.6.1.102]
D DR55_773 glmU; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D DR55_5708 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:bpsh00550]
D DR55_1361 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DR55_4348 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DR55_252 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DR55_1489 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DR55_1486 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DR55_1483 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DR55_1490 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DR55_1484 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DR55_2428 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DR55_3212 bacitracin resistance BacA family protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DR55_1876 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DR55_5352 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DR55_1485 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DR55_1488 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DR55_1541 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DR55_5120 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_1328 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_5423 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_2482 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_4522 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DR55_909 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DR55_1482 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_4052 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_4073 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_676 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DR55_4053 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DR55_314 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
C 00552 Teichoic acid biosynthesis [PATH:bpsh00552]
D DR55_3212 bacitracin resistance BacA family protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DR55_1876 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DR55_5352 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:bpsh00543]
D DR55_1743 bacterial transferase hexapeptide family protein K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-]
D DR55_2331 cysE; serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DR55_5333 hypothetical protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D DR55_3935 bacterial transferase hexapeptide family protein K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:bpsh00730]
D DR55_3312 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D DR55_2403 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D DR55_1823 phosphomethylpyrimidine kinase family protein K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D DR55_4223 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D DR55_5608 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DR55_2232 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DR55_1348 FAD dependent oxidoreductase family protein K03153 thiO; glycine oxidase [EC:1.4.3.19]
D DR55_3502 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DR55_1350 thiazole biosynthesis ThiG family protein K03149 thiG; thiazole synthase [EC:2.8.1.10]
D DR55_4192 hydroxyethylthiazole kinase family protein K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D DR55_1351 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DR55_3465 thiamine monophosphate synthase/TENI family protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D DR55_1556 thiL; thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D DR55_2028 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DR55_724 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_725 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_245 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DR55_4224 bacterial extracellular solute-binding family protein K10811 E2.5.1.2; thiamine pyridinylase [EC:2.5.1.2]
C 00740 Riboflavin metabolism [PATH:bpsh00740]
D DR55_4206 GTP cyclohydrolase II family protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D DR55_4452 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D DR55_1894 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DR55_4202 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DR55_1896 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DR55_415 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12]
D DR55_1893 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D DR55_1895 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D DR55_210 ribF; riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D DR55_2760 flavin reductase like domain protein K23462 tgnA; flavin-dependent trigonelline monooxygenase, reductase component [EC:1.5.1.36]
D DR55_3848 NADPH-dependent FMN reductase family protein K00299 ssuE; FMN reductase [EC:1.5.1.38]
D DR55_1783 bluB; 5,6-dimethylbenzimidazole synthase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79]
D DR55_4192 hydroxyethylthiazole kinase family protein K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D DR55_3382 NUDIX domain protein K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D DR55_1427 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:bpsh00750]
D DR55_266 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D DR55_2119 pyridoxal kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D DR55_2361 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_1991 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_433 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D DR55_2090 pdxJ; pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D DR55_2594 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:bpsh00760]
D DR55_203 nadB; L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D DR55_4433 hypothetical protein K06989 nadX; aspartate dehydrogenase [EC:1.4.1.21]
D DR55_205 nadA; quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D DR55_204 nadC; nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D DR55_377 hypothetical protein K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DR55_2054 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D DR55_2617 surE; 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D DR55_3448 cytidylyltransferase family protein K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D DR55_3792 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D DR55_107 nadE; NH(3)-dependent NAD(+) synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D DR55_1554 ygaD; protein YgaD K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D DR55_2540 isochorismatase family protein K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D DR55_1686 ATP-NAD kinase family protein K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D DR55_1630 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D DR55_1631 hypothetical protein K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1]
D DR55_1632 NAD(P) transhydrogenase beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1]
D DR55_5074 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D DR55_2769 gabD; succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:bpsh00770]
D DR55_3413 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_4940 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_5856 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_1139 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_4434 thiamine pyrophosphate enzyme, central domain protein K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D DR55_3412 ilvN; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D DR55_3411 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DR55_5043 acetohydroxy acid isomeroreductase, catalytic domain protein K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D DR55_162 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D DR55_1695 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D DR55_235 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D DR55_276 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D DR55_2510 2-dehydropantoate 2-reductase family protein K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D DR55_141 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D DR55_687 coaX; pantothenate kinase, type III family protein K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D DR55_213 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D DR55_562 coaD; pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D DR55_1503 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D DR55_2091 acpS; holo-[acyl-carrier-protein] synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D DR55_2175 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D DR55_5465 4'-phosphopantetheinyl transferase superfamily protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D DR55_327 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_5929 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_56 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D DR55_2793 amidase, hydantoinase/carbamoylase family protein K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D DR55_142 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:bpsh00780]
D DR55_630 methyltransferase domain protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D DR55_2078 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DR55_4032 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_3443 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_2076 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_4470 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_113 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_2435 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DR55_2375 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DR55_4625 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DR55_719 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DR55_1731 cys/Met metabolism PLP-dependent enzyme family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DR55_718 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DR55_720 bioD; dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D DR55_721 bioB; biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D DR55_686 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:bpsh00785]
D DR55_671 lipB; lipoyl(octanoyl) transferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D DR55_670 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2220 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DR55_3557 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1]
D DR55_2221 aceF; dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D DR55_3017 sucA; oxoglutarate dehydrogenase (succinyl-transferring), E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D DR55_3016 sucB; dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D DR55_5457 bkdA1; 2-oxoisovalerate dehydrogenase subunit alpha K00166 BCKDHA; 2-oxoisovalerate dehydrogenase E1 component subunit alpha [EC:1.2.4.4]
D DR55_5458 bkdA2; 2-oxoisovalerate dehydrogenase subunit beta K00167 BCKDHB; 2-oxoisovalerate dehydrogenase E1 component subunit beta [EC:1.2.4.4]
D DR55_5459 bkdB; lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex K09699 DBT; 2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]
D DR55_1143 gcvP; glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D DR55_1145 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DR55_1144 gcvH; glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:bpsh00790]
D DR55_3760 GTP cyclohydrolase I family protein K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DR55_5331 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DR55_4041 GTP cyclohydrolase I family protein K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D DR55_3503 folE2; GTP cyclohydrolase folE2 K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D DR55_724 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_725 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_448 NUDIX domain protein K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67]
D DR55_3911 FolB domain protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D DR55_771 FolB domain protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D DR55_1697 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D DR55_3240 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D DR55_2034 dihydrofolate reductase family protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DR55_3574 folC; bifunctional FolC family protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D DR55_4206 GTP cyclohydrolase II family protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D DR55_4452 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D DR55_1894 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D DR55_1694 pabB; aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D DR55_913 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DR55_1080 pcbd1; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D DR55_1081 phhA; phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D DR55_5332 short chain dehydrogenase family protein K03793 PTR1; pteridine reductase [EC:1.5.1.33]
D DR55_914 radical SAM superfamily protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DR55_915 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DR55_461 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DR55_2063 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DR55_334 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DR55_2597 moaE family protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DR55_2031 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DR55_2595 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DR55_2061 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D DR55_4076 mobA-like NTP transferase domain protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76]
D DR55_2062 mobA; molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:bpsh00670]
D DR55_2034 dihydrofolate reductase family protein K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D DR55_2217 tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D DR55_1760 beta-eliminating lyase family protein K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DR55_4804 glyA2; serine hydroxymethyltransferase 2 K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D DR55_209 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D DR55_1621 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DR55_2586 formyl transferase family protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DR55_923 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DR55_1145 gcvT; glycine cleavage system T protein K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D DR55_699 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DR55_700 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DR55_2040 thyA; thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DR55_4221 thymidylate synthase family protein K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D DR55_534 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D DR55_4793 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D DR55_1213 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D DR55_828 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:bpsh00860]
D DR55_2382 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DR55_1431 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D DR55_5565 aminotransferase class-III family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DR55_1897 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DR55_1318 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DR55_117 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D DR55_1114 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D DR55_3447 coproporphyrinogen III oxidase family protein K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D DR55_2155 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D DR55_1873 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D DR55_4007 FAD binding domain protein K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D DR55_1582 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D DR55_1688 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D DR55_116 uroporphyrinogen-III synthase HemD family protein K13543 hemDX; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D DR55_170 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D DR55_619 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DR55_620 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DR55_169 cbiX family protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D DR55_2855 cobI; precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D DR55_2853 cobG; precorrin-3B synthase K02229 cobG; precorrin-3B synthase [EC:1.14.13.83]
D DR55_2856 cobJ; precorrin-3B C17-methyltransferase K13541 cbiGH-cobJ; cobalt-precorrin 5A hydrolase / cobalt-factor III methyltransferase / precorrin-3B C17-methyltransferase [EC:3.7.1.12 2.1.1.272 2.1.1.131]
D DR55_2849 cobM; precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D DR55_2869 cobalamin synthesis G family protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D DR55_2850 precorrin-6x reductase CbiJ/CobK family protein K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D DR55_2851 cbiD; cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D DR55_2852 cbiT; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196]
D DR55_2854 precorrin-8X methylmutase family protein K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D DR55_2871 cobB/CobQ-like glutamine amidotransferase domain protein K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D DR55_2866 cobN; cobaltochelatase, CobN subunit K02230 cobN; cobaltochelatase CobN [EC:6.6.1.2]
D DR55_1677 cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DR55_2870 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DR55_145 cobQ; cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D DR55_147 cobD; cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DR55_2025 cobD/Cbib family protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D DR55_148 threonine-phosphate decarboxylase K02225 cobC1; cobalamin biosynthesis protein CobC
D DR55_146 cobinamide kinase / cobinamide phosphate guanyltransferase family protein K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D DR55_152 cobalamin-5-phosphate synthase family protein K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D DR55_153 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D DR55_151 cobC; alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D DR55_2865 AAA domain family protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
D DR55_1219 pyridoxamine 5'-phosphate oxidase family protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
D DR55_4968 bfr; bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:bpsh00130]
D DR55_45 UTRA domain protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D DR55_5620 chorismate lyase family protein K03181 ubiC; chorismate lyase [EC:4.1.3.40]
D DR55_1657 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DR55_1889 ubiD; ubiD decarboxylase family protein K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D DR55_1427 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DR55_1448 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
D DR55_1987 ubiG; 3-demethylubiquinone-9 3-O-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64]
D DR55_1624 ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-]
D DR55_456 ubiquinone/menaquinone biosynthesis methyltransferase family protein K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D DR55_1478 ubiquinone biosynthesis COQ7 family protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60]
D DR55_4769 isochorismate synthase family protein K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2]
D DR55_5174 NADPH-dependent FMN reductase family protein K00355 NQO1; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D DR55_3077 wrbA; quinone oxidoreductase, type IV K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D DR55_1246 flavodoxin family protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D DR55_3201 putative tryptophan repressor binding protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]
D DR55_1252 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:bpsh00900]
D DR55_3502 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D DR55_2430 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D DR55_2488 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D DR55_555 ispE; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D DR55_2489 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D DR55_2628 ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D DR55_5568 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DR55_198 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1427 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DR55_3501 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D DR55_1509 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DR55_2428 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DR55_2029 peptidase M48 family protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis [PATH:bpsh00909]
D DR55_5128 squalene/phytoene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D DR55_5386 shc; squalene-hopene cyclase K06045 shc; squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:5.4.99.17 4.2.1.129]
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:bpsh00906]
D DR55_2497 hpnD; squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:bpsh00903]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_469 alpha/beta hydrolase fold family protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation [PATH:bpsh00907]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DR55_5691 short chain dehydrogenase family protein K13774 atuB; citronellol/citronellal dehydrogenase
D DR55_5689 hypothetical protein K11731 atuD; citronellyl-CoA dehydrogenase [EC:1.3.99.-]
D DR55_5687 D-ala D-ala ligase family protein K13777 atuF; geranyl-CoA carboxylase alpha subunit [EC:6.4.1.5]
D DR55_5690 carboxyl transferase domain protein K13778 atuC; geranyl-CoA carboxylase beta subunit [EC:6.4.1.5]
D DR55_5688 enoyl-CoA hydratase/isomerase family protein K13779 atuE; isohexenylglutaconyl-CoA hydratase [EC:4.2.1.57]
D DR55_752 HMGL-like family protein K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D DR55_443 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D DR55_1563 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DR55_2357 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D DR55_2358 hypothetical protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D DR55_5720 FAD dependent oxidoreductase family protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
D DR55_4322 FAD binding domain protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
C 00253 Tetracycline biosynthesis
D DR55_5720 FAD dependent oxidoreductase family protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
D DR55_4322 FAD binding domain protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
C 00523 Polyketide sugar unit biosynthesis [PATH:bpsh00523]
D DR55_1834 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DR55_1833 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DR55_1835 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DR55_1836 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D DR55_1840 3-beta hydroxysteroid dehydrogenase/isomerase family protein K17947 wbiB; dTDP-L-rhamnose 4-epimerase [EC:5.1.3.25]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:bpsh01053]
D DR55_4769 isochorismate synthase family protein K01851 pchA; salicylate biosynthesis isochorismate synthase [EC:5.4.4.2]
D DR55_4768 pchB; salicylate biosynthesis protein pchB K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21]
D DR55_4766 AMP-binding enzyme family protein K12238 pchD; salicylate---[aryl-carrier protein] ligase [EC:6.2.1.61]
D DR55_4764 amino acid adenylation domain protein K12239 pchE; L-cysteine---[L-cysteinyl-carrier protein] ligase PchE [EC:6.2.1.69]
D DR55_4763 amino acid adenylation domain protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D DR55_4762 thiazolinyl imide reductase family protein K12241 pchG; pyochelin biosynthesis protein PchG
C 01055 Biosynthesis of vancomycin group antibiotics
D DR55_1833 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:bpsh00946]
D DR55_3614 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids [PATH:bpsh00996]
D DR55_4562 P-hydroxycinnamoyl CoA hydratase/lyase K18383 ferB; feruloyl-CoA hydratase/lyase [EC:4.1.2.61]
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis [PATH:bpsh00311]
D DR55_4511 cys/Met metabolism PLP-dependent enzyme family protein K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
D DR55_364 penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D DR55_2802 penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D DR55_5161 penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D DR55_4388 bla; beta-lactamase Toho-1 K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:bpsh00332]
D DR55_1513 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D DR55_1581 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:bpsh00261]
D DR55_4020 mbtH; protein mbtH K05375 mbtH; MbtH protein
D DR55_2884 mbtH-like family protein K05375 mbtH; MbtH protein
D DR55_2818 mbtH-like family protein K05375 mbtH; MbtH protein
D DR55_171 cysN; sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D DR55_2363 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DR55_172 cysD; sulfate adenylyltransferase, small subunit K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D DR55_2340 aspartate kinase domain protein K00928 lysC; aspartate kinase [EC:2.7.2.4]
D DR55_3566 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D DR55_739 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DR55_2263 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DR55_180 dihydrodipicolinate synthetase family protein K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D DR55_1575 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:bpsh00521]
D DR55_1906 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
D DR55_1853 phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III family protein K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D DR55_2329 inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D DR55_3099 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D DR55_3100 hypothetical protein K00010 iolG; myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]
D DR55_1834 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DR55_1833 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D DR55_1835 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D DR55_1836 rfbD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D DR55_1906 glk; glucokinase K00845 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:bpsh00525]
D DR55_1834 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D DR55_1833 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:bpsh00401]
D DR55_2816 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_1364 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_560 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_5534 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4984 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4531 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
C 00404 Staurosporine biosynthesis [PATH:bpsh00404]
D DR55_5722 prnA; tryptophan halogenase K14266 prnA; tryptophan 7-halogenase [EC:1.14.19.9]
D DR55_5721 prnA; tryptophan halogenase K19981 prnB; monodechloroaminopyrrolnitrin synthase
D DR55_5720 FAD dependent oxidoreductase family protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
D DR55_4322 FAD binding domain protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
D DR55_5719 rieske [2Fe-2S] domain protein K19982 prnD; aminopyrrolnitrin oxygenase [EC:1.14.13.-]
C 00405 Phenazine biosynthesis [PATH:bpsh00405]
D DR55_5621 FAD binding domain protein K20940 phzS; 5-methylphenazine-1-carboxylate 1-monooxygenase [EC:1.14.13.218]
D DR55_1457 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DR55_1456 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DR55_4867 metallo-beta-lactamase superfamily protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
C 00333 Prodigiosin biosynthesis
D DR55_2075 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DR55_3263 mdcH; malonate decarboxylase, epsilon subunit K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DR55_4032 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_3443 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_2076 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_4470 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_113 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_2375 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DR55_4625 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:bpsh00998]
D DR55_2077 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D DR55_1176 phosphopantetheine attachment site family protein K02078 acpP; acyl carrier protein
D DR55_4742 aepX; phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D DR55_4843 aepX; phosphoenolpyruvate phosphomutase K01841 pepM; phosphoenolpyruvate phosphomutase [EC:5.4.2.9]
D DR55_4844 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
D DR55_4743 aepY; phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:bpsh00999]
D DR55_878 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D DR55_1540 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D DR55_3614 hypothetical protein K05349 bglX; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites [PATH:bpsh00997]
D DR55_5202 pyoverdine/dityrosine biosynthesis family protein K22952 pvcA; L-tyrosine isonitrile synthase [EC:4.1.99.24]
D DR55_5201 pvcB; paerucumarin biosynthesis protein PvcB K22874 pvcB; L-tyrosine isonitrile desaturase/decarboxylase [EC:1.14.20.9 1.14.20.10]
D DR55_5200 hypothetical protein K25524 pvcC; paerucumarin biosynthesis protein PvcC [EC:1.14.-.-]
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:bpsh00362]
D DR55_5831 benA; benzoate 1,2-dioxygenase, large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D DR55_5830 benB; benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D DR55_5829 benC; benzoate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D DR55_5828 short chain dehydrogenase family protein K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D DR55_5843 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D DR55_5844 muconate and chloromuconate cycloisomerases family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D DR55_5842 catC; muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4]
D DR55_5325 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24]
D DR55_5328 pcaI; 3-oxoadipate CoA-transferase subunit A K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6]
D DR55_5327 pcaJ; 3-oxoadipate CoA-transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6]
D DR55_443 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D DR55_1466 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D DR55_5081 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D DR55_5932 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D DR55_5931 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
D DR55_3470 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DR55_3980 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D DR55_3981 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
D DR55_5326 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
D DR55_2604 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D DR55_4396 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D DR55_5324 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D DR55_5393 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
D DR55_5928 demethylmenaquinone methyltransferase family protein K10218 ligK; 4-hydroxy-4-methyl-2-oxoglutarate aldolase [EC:4.1.3.17]
D DR55_5329 pobA; P-hydroxybenzoate hydroxylase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
D DR55_444 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DR55_2539 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DR55_663 enoyl-CoA hydratase/isomerase family protein K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D DR55_1771 glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:bpsh00627]
D DR55_5761 ethA; FAD-containing monooxygenase EthA K10215 ethA; monooxygenase [EC:1.14.13.-]
D DR55_3426 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_5419 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_4425 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_1214 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_5572 acyP; acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D DR55_278 mdlC; benzoylformate decarboxylase K01576 mdlC; benzoylformate decarboxylase [EC:4.1.1.7]
D DR55_277 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D DR55_1427 polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylase family protein K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D DR55_4871 AMP-binding enzyme family protein K08295 abmG; 2-aminobenzoate-CoA ligase [EC:6.2.1.32]
D DR55_5847 ring hydroxylating alpha subunit family protein K16319 andAc; anthranilate 1,2-dioxygenase large subunit [EC:1.14.12.1]
D DR55_5848 ring hydroxylating beta subunit K16320 andAd; anthranilate 1,2-dioxygenase small subunit [EC:1.14.12.1]
D DR55_5849 ndoA; naphthalene 1,2-dioxygenase system ferredoxin subunit K18248 andAb; anthranilate 1,2-dioxygenase ferredoxin component
D DR55_5850 NAD(P)-binding family protein K18249 andAa; anthranilate 1,2-dioxygenase ferredoxin reductase component [EC:1.18.1.-]
D DR55_4561 aldehyde dehydrogenase family protein K21802 vdh; vanillin dehydrogenase [EC:1.2.1.67]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
C 00364 Fluorobenzoate degradation [PATH:bpsh00364]
D DR55_5831 benA; benzoate 1,2-dioxygenase, large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D DR55_5830 benB; benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D DR55_5829 benC; benzoate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D DR55_5828 short chain dehydrogenase family protein K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D DR55_5843 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D DR55_1215 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DR55_3496 chlorophyllase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DR55_5844 muconate and chloromuconate cycloisomerases family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
C 00625 Chloroalkane and chloroalkene degradation [PATH:bpsh00625]
D DR55_5789 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_5817 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_2734 iron-containing alcohol dehydrogenase family protein K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DR55_300 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
D DR55_112 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_2665 aldehyde dehydrogenase family protein K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D DR55_4806 fdhA; formaldehyde dehydrogenase, glutathione-independent K00148 fdhA; glutathione-independent formaldehyde dehydrogenase [EC:1.2.1.46]
D DR55_757 alpha/beta hydrolase fold family protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
D DR55_1436 HAD hydrolase, IA, variant 3 family protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D DR55_5867 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D DR55_2393 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:bpsh00361]
D DR55_5843 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D DR55_1215 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DR55_3496 chlorophyllase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DR55_5844 muconate and chloromuconate cycloisomerases family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D DR55_1436 HAD hydrolase, IA, variant 3 family protein K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D DR55_5867 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D DR55_2393 dehII; haloacid dehalogenase, type II K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D DR55_757 alpha/beta hydrolase fold family protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3]
C 00623 Toluene degradation [PATH:bpsh00623]
D DR55_277 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D DR55_5843 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1]
D DR55_5844 muconate and chloromuconate cycloisomerases family protein K01856 catB; muconate cycloisomerase [EC:5.5.1.1]
D DR55_1215 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D DR55_3496 chlorophyllase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation [PATH:bpsh00622]
D DR55_277 aldehyde dehydrogenase family protein K00141 xylC; benzaldehyde dehydrogenase (NAD) [EC:1.2.1.28]
D DR55_5831 benA; benzoate 1,2-dioxygenase, large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-]
D DR55_5830 benB; benzoate 1,2-dioxygenase, small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-]
D DR55_5829 benC; benzoate 1,2-dioxygenase electron transfer component K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-]
D DR55_5828 short chain dehydrogenase family protein K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-]
D DR55_3470 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DR55_5932 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D DR55_5931 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
D DR55_443 acetyl-CoA C-acetyltransferase family protein K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:bpsh00643]
D DR55_4468 feaB; phenylacetaldehyde dehydrogenase K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D DR55_1021 aldehyde dehydrogenase family protein K00146 feaB; phenylacetaldehyde dehydrogenase [EC:1.2.1.39]
D DR55_1779 hmgA; homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D DR55_565 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2]
D DR55_1780 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D DR55_695 fumarylacetoacetate (FAA) hydrolase family protein K16171 faaH; fumarylacetoacetate (FAA) hydrolase [EC:3.7.1.2]
D DR55_3426 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_5419 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_4425 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D DR55_1214 amidase family protein K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00791 Atrazine degradation [PATH:bpsh00791]
D DR55_5825 isochorismatase family protein K23359 biuH; biuret amidohydrolase [EC:3.5.1.84]
D DR55_5166 allophanate hydrolase subunit 1 family protein K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D DR55_1860 ureC; urease, alpha subunit K01428 ureC; urease subunit alpha [EC:3.5.1.5]
D DR55_1861 ureB; urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5]
D DR55_1862 ureA; urease, gamma subunit K01430 ureA; urease subunit gamma [EC:3.5.1.5]
C 00930 Caprolactam degradation [PATH:bpsh00930]
D DR55_5874 thiJ/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D DR55_2170 fatty acid desaturase family protein K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D DR55_5336 strictosidine synthase family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DR55_469 alpha/beta hydrolase fold family protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
D DR55_1468 enoyl-CoA hydratase/isomerase family protein K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17]
D DR55_1009 enoyl-CoA hydratase/isomerase family protein K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
C 00363 Bisphenol degradation
D DR55_4607 hypothetical protein K05913 dad; 2,4'-dihydroxyacetophenone dioxygenase [EC:1.13.11.41]
C 00621 Dioxin degradation [PATH:bpsh00621]
D DR55_3470 tautomerase enzyme family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D DR55_5932 dmpG; 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D DR55_5931 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10]
C 00626 Naphthalene degradation [PATH:bpsh00626]
D DR55_5789 zinc-binding dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_5817 zinc-binding alcohol dehydrogenase family protein K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1]
D DR55_2734 iron-containing alcohol dehydrogenase family protein K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1]
D DR55_300 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
D DR55_3980 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3]
D DR55_3981 pcaH; protocatechuate 3,4-dioxygenase, beta subunit K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3]
C 00365 Furfural degradation
C 00984 Steroid degradation [PATH:bpsh00984]
D DR55_5452 FAD dependent oxidoreductase family protein K03333 choD; cholesterol oxidase [EC:1.1.3.6]
D DR55_4337 rieske [2Fe-2S] domain protein K15982 kshA; 3-ketosteroid 9alpha-monooxygenase subunit A [EC:1.14.15.30]
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:bpsh03020]
D DR55_1280 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DR55_1281 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DR55_1314 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DR55_1942 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D DR55_4479 DEAD_2 family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:bpsh03010]
D DR55_1995 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DR55_2424 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DR55_1294 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DR55_1313 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DR55_1305 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DR55_2574 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DR55_1284 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DR55_1302 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8
D DR55_1607 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9
D DR55_1287 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DR55_1312 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DR55_1283 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DR55_1311 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DR55_1301 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D DR55_3403 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DR55_2018 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DR55_1297 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DR55_2576 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DR55_1292 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DR55_249 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DR55_3506 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DR55_1183 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DR55_1277 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DR55_1291 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DR55_1288 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DR55_1289 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DR55_1300 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5
D DR55_1303 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DR55_1279 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DR55_2577 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DR55_1278 ribosomal L10 family protein K02864 RP-L10; large subunit ribosomal protein L10
D DR55_1276 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DR55_1606 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DR55_1298 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DR55_1307 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DR55_1295 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DR55_1315 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DR55_1304 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DR55_2021 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DR55_3051 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DR55_1510 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DR55_1293 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DR55_1290 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DR55_1299 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DR55_558 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D DR55_1511 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DR55_201 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DR55_1296 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DR55_1306 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DR55_2607 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DR55_2072 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DR55_202 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DR55_978 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DR55_3052 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DR55_1310 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DR55_1263 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_1469 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_4996 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_3362 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_1473 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_4992 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_3358 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_1267 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_1268 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_1474 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_4991 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_3357 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:bpsh00970]
D DR55_1231 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_2383 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_1265 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_3360 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_4994 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_1471 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_3211 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_1153 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_72 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_1944 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_1945 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_2051 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DR55_2052 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DR55_2385 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DR55_2524 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DR55_2387 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DR55_4330 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DR55_2100 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DR55_556 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DR55_2384 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DR55_2386 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DR55_1878 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DR55_2098 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DR55_2099 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DR55_1270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DR55_2956 tRNA-His K14226 tRNA-His; tRNA His
D DR55_1264 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DR55_3361 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DR55_1470 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DR55_4995 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DR55_3398 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_4563 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_2981 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_2980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_177 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_2498 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_1751 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DR55_932 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DR55_348 tRNA-Met K14230 tRNA-Met; tRNA Met
D DR55_2214 tRNA-Met K14230 tRNA-Met; tRNA Met
D DR55_2967 tRNA-Met K14230 tRNA-Met; tRNA Met
D DR55_3510 tRNA-Met K14230 tRNA-Met; tRNA Met
D DR55_916 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DR55_3044 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DR55_1508 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DR55_3223 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DR55_4961 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DR55_1921 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DR55_1936 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DR55_2341 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DR55_1384 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DR55_1271 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DR55_1961 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DR55_1273 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DR55_1269 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DR55_2517 tRNA-Val K14237 tRNA-Val; tRNA Val
D DR55_2189 tRNA-Val K14237 tRNA-Val; tRNA Val
D DR55_3055 tRNA-Val K14237 tRNA-Val; tRNA Val
D DR55_5706 tRNA-Val K14237 tRNA-Val; tRNA Val
D DR55_2382 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DR55_904 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DR55_1973 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DR55_903 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DR55_905 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DR55_3124 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DR55_3121 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DR55_449 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DR55_425 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DR55_426 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DR55_3054 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DR55_1920 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DR55_3609 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D DR55_2336 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DR55_133 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DR55_2586 formyl transferase family protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DR55_923 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D DR55_3091 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DR55_1578 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DR55_4517 tRNA synthetases class I (C) catalytic domain protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DR55_3965 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DR55_211 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DR55_2240 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DR55_702 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DR55_1516 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DR55_2629 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DR55_3050 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DR55_3049 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DR55_1613 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DR55_2261 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DR55_5872 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:bpsh03060]
D DR55_1308 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DR55_1274 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DR55_3399 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DR55_1646 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D DR55_1645 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D DR55_1647 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DR55_976 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DR55_1497 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DR55_635 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DR55_1519 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DR55_564 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DR55_1374 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D DR55_1375 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D DR55_1376 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D DR55_2086 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DR55_212 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:bpsh04122]
D DR55_5608 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DR55_2232 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DR55_3497 rhodanese-like domain protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D DR55_3098 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DR55_1628 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DR55_2597 moaE family protein K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D DR55_2063 moaA; molybdenum cofactor biosynthesis protein A K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D DR55_2596 moaD; molybdopterin converting factor, subunit 1 K03636 moaD; sulfur-carrier protein
D DR55_640 thiF family protein K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80]
D DR55_334 moaC; molybdenum cofactor biosynthesis protein C K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D DR55_2031 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D DR55_1349 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
C 03050 Proteasome
C 03018 RNA degradation [PATH:bpsh03018]
D DR55_1515 NUDIX domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D DR55_2064 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D DR55_2251 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DR55_3402 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DR55_398 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DR55_20 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DR55_2979 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DR55_1282 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DR55_2611 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DR55_1692 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DR55_4874 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_1822 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_2994 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DR55_2633 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DR55_3231 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DR55_4003 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DR55_1698 pcnB; poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:bpsh03030]
D DR55_3256 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_1951 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_17 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DR55_2613 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DR55_2552 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DR55_1580 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DR55_165 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DR55_980 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DR55_2578 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DR55_3508 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DR55_530 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D DR55_3255 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DR55_2438 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DR55_3493 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DR55_2419 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:bpsh03410]
D DR55_31 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DR55_1452 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DR55_551 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DR55_552 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DR55_2337 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D DR55_956 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D DR55_1184 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DR55_5497 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DR55_2401 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DR55_901 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DR55_2205 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DR55_3493 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DR55_2242 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DR55_2419 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:bpsh03420]
D DR55_2487 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DR55_5307 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DR55_532 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DR55_4983 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D DR55_2096 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D DR55_3090 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DR55_3493 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DR55_2419 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DR55_4479 DEAD_2 family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:bpsh03430]
D DR55_2269 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DR55_1704 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL
D DR55_3090 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DR55_241 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DR55_3500 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DR55_2242 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DR55_530 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D DR55_17 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DR55_980 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DR55_2613 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DR55_1580 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DR55_2552 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DR55_3256 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_1951 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_165 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DR55_2419 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DR55_2313 D12 class N6 adenine-specific DNA methyltransferase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:bpsh03440]
D DR55_2242 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DR55_530 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D DR55_2089 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DR55_2615 recR; recombination protein RecR K06187 recR; recombination protein RecR
D DR55_344 recA; protein RecA K03553 recA; recombination protein RecA
D DR55_3493 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DR55_1619 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DR55_1618 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DR55_1620 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DR55_1650 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DR55_3320 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D DR55_3321 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D DR55_3319 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DR55_17 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DR55_980 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DR55_2613 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DR55_1580 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DR55_2552 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DR55_3256 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_1951 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_165 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DR55_1115 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DR55_2575 putative primosomal replication protein n K02686 priB; primosomal replication protein N
C 03450 Non-homologous end-joining [PATH:bpsh03450]
D DR55_5521 Ku protein K10979 ku; DNA end-binding protein Ku
D DR55_5522 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:bpsh03250]
D DR55_2334 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:bpsh02010]
D DR55_733 sbp; sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D DR55_2941 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DR55_2940 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DR55_2939 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DR55_2938 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DR55_3701 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D DR55_3703 binding--dependent transport system inner membrane component family protein K15552 tauC; taurine transport system permease protein
D DR55_3702 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D DR55_3350 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_4408 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_1037 bacterial extracellular solute-binding s, 3 family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_2926 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_2961 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DR55_2923 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DR55_1035 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DR55_2960 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DR55_2924 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DR55_1036 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DR55_3476 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DR55_1793 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein
D DR55_3475 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D DR55_3474 ABC transporter family protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DR55_4646 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D DR55_3325 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D DR55_4647 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D DR55_3326 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D DR55_4648 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DR55_3327 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DR55_946 bacterial extracellular solute-binding family protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DR55_5291 bacterial extracellular solute-binding family protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DR55_945 binding--dependent transport system inner membrane component family protein K11070 potC; spermidine/putrescine transport system permease protein
D DR55_5292 binding--dependent transport system inner membrane component family protein K11070 potC; spermidine/putrescine transport system permease protein
D DR55_944 binding--dependent transport system inner membrane component family protein K11071 potB; spermidine/putrescine transport system permease protein
D DR55_5293 binding--dependent transport system inner membrane component family protein K11071 potB; spermidine/putrescine transport system permease protein
D DR55_2670 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D DR55_4883 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D DR55_2673 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D DR55_4886 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D DR55_2672 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein
D DR55_4885 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein
D DR55_2671 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D DR55_4884 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D DR55_5003 phnS; 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D DR55_5000 phnV; 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D DR55_5001 phnU; 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D DR55_5002 phnT; 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D DR55_3852 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DR55_4785 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DR55_4790 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DR55_4795 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DR55_3850 choW; choline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D DR55_3849 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DR55_2829 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D DR55_2830 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D DR55_2833 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D DR55_2831 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D DR55_5648 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_287 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_4056 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_1912 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_291 bacterial extracellular solute-binding family protein K10227 smoE; polyol transport system substrate-binding protein
D DR55_290 binding--dependent transport system inner membrane component family protein K10228 smoF; polyol transport system permease protein
D DR55_289 binding--dependent transport system inner membrane component family protein K10229 smoG; polyol transport system permease protein
D DR55_1356 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DR55_5409 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DR55_1354 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DR55_681 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DR55_1353 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DR55_683 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DR55_1357 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D DR55_1352 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DR55_682 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DR55_1909 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D DR55_1910 binding--dependent transport system inner membrane component family protein K17316 gtsB; glucose/mannose transport system permease protein
D DR55_1911 binding--dependent transport system inner membrane component family protein K17317 gtsC; glucose/mannose transport system permease protein
D DR55_4300 ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit K10439 rbsB; ribose transport system substrate-binding protein
D DR55_2892 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_5224 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_2936 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_4555 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_4302 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_2890 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_5223 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_4303 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_2934 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_4301 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DR55_5222 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DR55_2891 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DR55_2935 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DR55_1548 periplasmic binding s and sugar binding domain of LacI family protein K10537 araF; L-arabinose transport system substrate-binding protein
D DR55_1550 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein
D DR55_1549 ABC transporter family protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D DR55_5100 periplasmic binding s and sugar binding domain of LacI family protein K17205 xltC; putative xylitol transport system substrate-binding protein
D DR55_5101 branched-chain amino acid transport system / permease component family protein K17206 xltB; putative xylitol transport system permease protein
D DR55_5102 ABC transporter family protein K17207 xltA; putative xylitol transport system ATP-binding protein
D DR55_1336 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D DR55_1337 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D DR55_1338 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D DR55_1339 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D DR55_3238 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D DR55_3237 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D DR55_3236 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D DR55_3235 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DR55_1669 phnD; phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D DR55_1670 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D DR55_1668 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D DR55_5087 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D DR55_1123 bacterial extracellular solute-binding s, 3 family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D DR55_2138 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D DR55_103 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein
D DR55_4350 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein
D DR55_2128 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein
D DR55_102 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D DR55_4351 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D DR55_2127 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D DR55_104 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_4349 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_2129 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_101 lysine-arginine-ornithine-binding periplasmic family protein K10014 hisJ; histidine transport system substrate-binding protein
D DR55_5388 bacterial extracellular solute-binding s, 3 family protein K10036 glnH; glutamine transport system substrate-binding protein
D DR55_5389 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein
D DR55_5390 ABC transporter family protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_1592 gltI; glutamate/aspartate periplasmic-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D DR55_1594 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D DR55_1593 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D DR55_1595 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D DR55_1905 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DR55_2972 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DR55_1904 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein
D DR55_2973 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein
D DR55_1903 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_3404 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1089 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1093 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1217 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1022 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1118 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_4776 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_2115 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_4537 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_2845 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1090 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_1094 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_1023 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_3111 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_4775 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_196 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_1095 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_3110 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_4774 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_1024 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_195 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_1091 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_1087 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_1025 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_4773 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_194 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_4772 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_3109 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_1026 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_193 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_1088 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_1096 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_614 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DR55_5091 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DR55_5034 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D DR55_2009 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DR55_5031 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein
D DR55_2008 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein
D DR55_5032 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D DR55_2007 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D DR55_1868 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein
D DR55_1867 urtB; urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D DR55_1866 urtC; urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D DR55_1865 urtD; urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D DR55_1864 urtE; urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D DR55_5586 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DR55_5587 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein
D DR55_5588 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D DR55_5589 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D DR55_5590 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DR55_709 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DR55_840 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DR55_839 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein
D DR55_838 binding--dependent transport system inner membrane component family protein K12370 dppC; dipeptide transport system permease protein
D DR55_837 hypothetical protein K12371 dppD; dipeptide transport system ATP-binding protein
D DR55_836 hypothetical protein K12372 dppF; dipeptide transport system ATP-binding protein
D DR55_3975 bacterial extracellular solute-binding s, 5 Middle family protein K13889 gsiB; glutathione transport system substrate-binding protein
D DR55_3976 binding--dependent transport system inner membrane component family protein K13890 gsiC; glutathione transport system permease protein
D DR55_3977 gsiD; glutathione transport system permease protein gsiD K13891 gsiD; glutathione transport system permease protein
D DR55_3974 nikE; nickel import ATP-binding protein NikE K13892 gsiA; glutathione transport system ATP-binding protein
D DR55_2376 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D DR55_2377 binding--dependent transport system inner membrane component family protein K13894 yejB; microcin C transport system permease protein
D DR55_2378 binding--dependent transport system inner membrane component family protein K13895 yejE; microcin C transport system permease protein
D DR55_2379 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D DR55_2879 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D DR55_2881 fecCD transport family protein K23228 fhuB; ferric hydroxamate transport system permease protein
D DR55_2882 putative siderophore transport system ATP-binding protein YusV K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D DR55_1712 chain length determinant family protein K10107 kpsE; capsular polysaccharide transport system permease protein
D DR55_1713 ABC-2 type transporter family protein K09688 kpsM; capsular polysaccharide transport system permease protein
D DR55_1714 ABC transporter family protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D DR55_1837 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DR55_1838 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DR55_2947 ABC-2 type transporter, NodJ family protein K09694 nodJ; lipooligosaccharide transport system permease protein
D DR55_2946 nodI; nodulation ABC transporter NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D DR55_2244 liporeleasing system, transmembrane , LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D DR55_2245 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DR55_167 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D DR55_168 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D DR55_543 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DR55_2719 ABC-2 transporter family protein K19341 nosY; Cu-processing system permease protein
D DR55_2720 ABC transporter family protein K19340 nosF; Cu-processing system ATP-binding protein
D DR55_16 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DR55_3999 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D DR55_1410 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D DR55_438 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D DR55_2777 ABC transporter family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DR55_4728 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DR55_2877 cyclic peptide transporter family protein K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D DR55_1347 ABC transporter family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:bpsh02060]
D DR55_641 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DR55_4177 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr
D DR55_642 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr
D DR55_581 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D DR55_643 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DR55_582 ptsP; phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D DR55_547 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:bpsh03070]
D DR55_3996 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_1409 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_3728 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D DR55_3678 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D DR55_3885 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D DR55_3646 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D DR55_3878 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D DR55_3653 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D DR55_3871 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D DR55_3654 type III secretion , HrpO family protein K03227 yscS; type III secretion protein S
D DR55_3870 type III secretion , HrpO family protein K03227 yscS; type III secretion protein S
D DR55_3641 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D DR55_3883 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D DR55_3649 type III secretion , YscU/HrpY family protein K03229 yscU; type III secretion protein U
D DR55_3875 flhB HrpN YscU SpaS family protein K03229 yscU; type III secretion protein U
D DR55_3733 invA; invasion protein invA K03230 yscV; type III secretion protein V
D DR55_3650 type III secretion , HrcV family protein K03230 yscV; type III secretion protein V
D DR55_3874 type III secretion , HrcV family protein K03230 yscV; type III secretion protein V
D DR55_3643 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D DR55_3881 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D DR55_3738 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D DR55_3652 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D DR55_3872 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D DR55_3644 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L
D DR55_3880 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L
D DR55_1066 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D DR55_1063 type IV pilus biogenesis family protein K02452 gspC; general secretion pathway protein C
D DR55_1064 gspF; type II secretion system protein F K02455 gspF; general secretion pathway protein F
D DR55_1062 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D DR55_1061 gspH; type II secretion system protein H K02457 gspH; general secretion pathway protein H
D DR55_1060 gspI; type II secretion system protein I K02458 gspI; general secretion pathway protein I
D DR55_1059 putative general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D DR55_1058 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K
D DR55_1057 gspL; type II secretion system protein L K02461 gspL; general secretion pathway protein L
D DR55_1056 type II secretion system (T2SS), M family protein K02462 gspM; general secretion pathway protein M
D DR55_1065 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DR55_3673 type II/IV secretion system family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DR55_1646 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D DR55_1645 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D DR55_1274 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DR55_3399 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DR55_1308 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DR55_1647 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DR55_976 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DR55_1497 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DR55_564 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DR55_635 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DR55_1519 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DR55_1374 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D DR55_1375 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D DR55_1376 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D DR55_4828 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_4829 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_4376 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5639 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5666 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5181 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_3770 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5261 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_3167 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_4079 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5290 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_4834 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_5191 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_1398 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_3775 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_5267 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_4823 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_5192 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_1394 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_5625 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_5266 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_3762 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D DR55_5195 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_1406 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_5628 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_4820 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_5263 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_3763 type IV/VI secretion system , DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D DR55_5194 type VI secretion system OmpA/MotB family protein K11892 impK; type VI secretion system protein ImpK
D DR55_1392 type IV/VI secretion system , DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D DR55_5627 type VI secretion system OmpA/MotB family protein K11892 impK; type VI secretion system protein ImpK
D DR55_4821 type IV/VI secretion system , DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D DR55_5264 type VI secretion system OmpA/MotB family protein K11892 impK; type VI secretion system protein ImpK
D DR55_5271 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D DR55_4830 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_1402 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_5638 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_5188 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_3771 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_5250 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:bpsh02020]
D DR55_3232 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DR55_3233 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DR55_3666 hypothetical protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DR55_724 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_725 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_3238 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D DR55_97 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DR55_2492 putative oxidative stress related two component system, sensor kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DR55_98 hypothetical protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DR55_2493 ompR; transcriptional regulatory protein ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DR55_2083 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_311 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_3117 PDZ domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_3335 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D DR55_3336 MMPL family protein K07788 mdtB; multidrug efflux pump
D DR55_3337 acrB/AcrD/AcrF family protein K07789 mdtC; multidrug efflux pump
D DR55_4294 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_5734 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_4618 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_4293 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D DR55_5735 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D DR55_778 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D DR55_777 heavy metal efflux pump, CzcA family protein K07787 cusA; copper/silver efflux system protein
D DR55_1750 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D DR55_1190 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D DR55_1191 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D DR55_1182 hypothetical protein K02406 fliC; flagellin
D DR55_1210 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA
D DR55_1192 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DR55_3435 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D DR55_3434 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DR55_3438 kdpA; K+-transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit
D DR55_3437 kdpB; K+-transporting ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6]
D DR55_3436 kdpC; K+-transporting ATPase, C subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit
D DR55_1034 his Kinase A domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D DR55_4644 HAMP domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D DR55_4645 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D DR55_1033 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D DR55_620 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DR55_4808 lsdA; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D DR55_979 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DR55_2905 efflux transporter, RND family, MFP subunit K18094 mexX; membrane fusion protein, multidrug efflux system
D DR55_2904 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18095 mexY; multidrug efflux pump
D DR55_4380 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DR55_3545 hpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D DR55_5577 hpcH/HpaI aldolase/citrate lyase family protein K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34]
D DR55_2207 GAF domain protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D DR55_2206 bacterial regulatory s, luxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DR55_5410 bacterial regulatory s, luxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DR55_2211 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DR55_4168 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DR55_2210 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DR55_4169 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DR55_2208 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DR55_4171 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DR55_2209 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D DR55_4170 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW
D DR55_3920 response regulator K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D DR55_2749 hpt domain protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D DR55_5249 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D DR55_3135 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DR55_2748 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DR55_5241 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DR55_5247 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DR55_4165 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D DR55_850 bacterial regulatory s, luxR family protein K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D DR55_2139 fatty acid desaturase family protein K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D DR55_3137 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_3140 fimbrial family protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_122 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_121 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_3142 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_3141 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_2739 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_3139 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_123 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_2899 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_3138 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D DR55_124 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D DR55_2900 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_2740 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_5273 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_5245 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_2922 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_3008 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_5548 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_5549 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_2920 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DR55_3005 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DR55_5545 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DR55_2919 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D DR55_3004 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D DR55_5544 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D DR55_2917 cobQ/CobB/MinD/ParA nucleotide binding domain protein K02282 cpaE; pilus assembly protein CpaE
D DR55_3003 response regulator K02282 cpaE; pilus assembly protein CpaE
D DR55_5539 cobQ/CobB/MinD/ParA nucleotide binding domain protein K02282 cpaE; pilus assembly protein CpaE
D DR55_2916 ABC transporter family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DR55_3002 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DR55_5538 ABC transporter family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DR55_3001 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D DR55_5537 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D DR55_2915 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D DR55_2914 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D DR55_3000 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D DR55_5536 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D DR55_2999 tetratricopeptide repeat family protein K27079 tadD; tight adherence protein D
D DR55_2997 tad-like Flp pilus-assembly family protein K27080 tadG; tight adherence protein G
D DR55_3495 tad-like Flp pilus-assembly family protein K27080 tadG; tight adherence protein G
D DR55_2422 glnD; protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D DR55_106 glnB; nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D DR55_2203 sensory box protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DR55_2204 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D DR55_2184 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_2202 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_4881 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_918 HAMP domain protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DR55_917 bacterial regulatory , Fis family protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_5303 his Kinase A domain protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D DR55_656 his Kinase A domain protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D DR55_655 AAA domain family protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D DR55_5302 bacterial regulatory , Fis family protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D DR55_1570 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D DR55_657 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D DR55_5515 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DR55_545 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DR55_338 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D DR55_1198 cheR methyltransferase, all-alpha domain protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DR55_4614 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_4890 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_3087 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_5792 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_5807 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_616 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_4074 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_1163 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_2824 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_2931 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_763 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_1197 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_5146 tsr; methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_4403 methyl-accepting chemotaxis (MCP) signaling domain protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_387 sensory box protein K03776 aer; aerotaxis receptor
D DR55_5080 sensory box protein K03776 aer; aerotaxis receptor
D DR55_1196 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D DR55_2823 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D DR55_1195 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DR55_1194 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DR55_1201 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DR55_1200 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DR55_5863 tetratricopeptide repeat family protein K13486 wspC; chemotaxis protein methyltransferase WspC
D DR55_5861 hypothetical protein K13487 wspA; methyl-accepting chemotaxis protein WspA
D DR55_5862 cheW-like domain protein K13488 wspB; chemotaxis-related protein WspB
D DR55_5864 cheW-like domain protein K13489 wspD; chemotaxis-related protein WspD
D DR55_5865 cheW-like domain protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D DR55_5866 cheB methylesterase family protein K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D DR55_1595 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D DR55_1594 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D DR55_1593 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D DR55_1592 gltI; glutamate/aspartate periplasmic-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D DR55_237 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DR55_4724 glsA; glutaminase A K01425 glsA; glutaminase [EC:3.5.1.2]
D DR55_889 his Kinase A domain protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D DR55_888 bacterial regulatory , Fis family protein K15012 regA; two-component system, response regulator RegA
D DR55_1379 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D DR55_1380 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DR55_1381 cytochrome C1 family protein K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D DR55_1230 ph_c-552; cytochrome c K08738 CYC; cytochrome c
D DR55_163 cyt; cytochrome c-552 K08738 CYC; cytochrome c
D DR55_5123 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DR55_3898 bacterial Cytochrome Ubiquinol Oxidase family protein K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DR55_576 cydA; cytochrome d ubiquinol oxidase subunit 1 K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D DR55_5124 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DR55_3899 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DR55_577 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D DR55_2707 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D DR55_579 cyd operon protein YbgT K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7]
D DR55_3996 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_1409 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_1738 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DR55_474 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DR55_1711 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DR55_5907 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DR55_5906 wzb; low molecular weight protein-tyrosine-phosphatase wzb K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D DR55_1739 low molecular weight phosphotyrosine phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D DR55_2230 low molecular weight phosphotyrosine phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D DR55_1740 exopolysaccharide transport family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DR55_5752 cobQ/CobB/MinD/ParA nucleotide binding domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DR55_5908 capsular exopolysaccharide family domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DR55_5708 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D DR55_4451 autoinducer synthetase family protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D DR55_4147 autoinducer synthetase family protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D DR55_4449 sigma-70, region 4 family protein K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D DR55_4306 RNA polymerase sigma factor, sigma-70 family protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D DR55_4305 fecR family protein K07165 fecR; transmembrane sensor
D DR55_821 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D DR55_1379 petA; ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:bpsh02024]
D DR55_2994 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DR55_2633 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DR55_1457 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D DR55_1456 glutamine amidotransferase of anthranilate synthase/aminodeoxychorismate synthase family protein K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D DR55_4867 metallo-beta-lactamase superfamily protein K20257 pqsE; 2-aminobenzoylacetyl-CoA thioesterase [EC:3.1.2.32]
D DR55_4451 autoinducer synthetase family protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D DR55_4147 autoinducer synthetase family protein K13061 rhlI; acyl homoserine lactone synthase [EC:2.3.1.184]
D DR55_3927 alpha/beta hydrolase family protein K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D DR55_4816 alpha/beta hydrolase family protein K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D DR55_3928 hypothetical protein K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D DR55_4815 hypothetical protein K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D DR55_3930 rhamnosyltransferase family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D DR55_4813 rhamnosyltransferase family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D DR55_4770 peptidase M23 family protein K08642 lasA; LasA protease [EC:3.4.24.-]
D DR55_3988 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DR55_1680 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D DR55_1750 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D DR55_1190 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D DR55_1191 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D DR55_3434 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DR55_5108 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_3529 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_950 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_2764 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_3298 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_5107 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_5110 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_3531 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_2766 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_3299 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_3301 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_3530 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DR55_2765 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DR55_5109 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DR55_3528 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DR55_2767 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DR55_3302 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DR55_3404 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1089 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1093 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1217 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1022 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1118 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_4776 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_2115 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_4537 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_2845 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1090 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_1094 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_1023 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_3111 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_4775 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_196 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_1095 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_3110 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_4774 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_1024 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_195 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_1091 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_1087 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_1025 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_4773 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_194 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_4772 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_3109 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_1026 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_193 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_1088 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_1096 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_4449 sigma-70, region 4 family protein K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D DR55_3705 autoinducer synthetase family protein K20250 cciI; acyl homoserine lactone synthase [EC:2.3.1.184]
D DR55_3706 bacterial regulatory s, luxR family protein K19731 cciR; LuxR family transcriptional regulator, quorum-sensing system regulator CciR
D DR55_3720 thermolysin metallopeptidase, catalytic domain protein K20273 zmpA; zinc metalloprotease ZmpA
D DR55_4787 peptidase propeptide and YPEB domain protein K20274 zmpB; zinc metalloprotease ZmpB
D DR55_736 inclusion body family protein K20275 aidA; nematocidal protein AidA
D DR55_1476 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_2990 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_5685 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_256 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_237 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DR55_295 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D DR55_3334 bacterial transcriptional regulator family protein K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
D DR55_4206 GTP cyclohydrolase II family protein K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D DR55_4452 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D DR55_4205 WD domain, G-beta repeat family protein K20332 toxC; toxoflavin biosynthesis protein ToxC
D DR55_4203 sulfatase-modifying factor enzyme 1 family protein K20333 toxD; toxoflavin biosynthesis protein ToxD
D DR55_4202 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DR55_1896 ribD; riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D DR55_4209 efflux transporter, RND family, MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D DR55_4208 acrB/AcrD/AcrF family protein K18307 mexI; multidrug efflux pump
D DR55_2903 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_4207 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_304 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_5797 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_5586 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DR55_5587 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein
D DR55_5588 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D DR55_5589 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D DR55_5590 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DR55_4370 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DR55_4381 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DR55_4382 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DR55_4383 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DR55_4384 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DR55_4385 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DR55_976 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DR55_4359 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D DR55_5736 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D DR55_1274 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DR55_3399 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DR55_1308 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DR55_1647 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DR55_1497 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DR55_564 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DR55_635 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DR55_1519 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DR55_747 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_5297 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_4576 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2983 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_3968 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2118 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:bpsh02030]
D DR55_4614 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_4890 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_3087 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_5792 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_5807 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_616 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_4074 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_1163 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_2824 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_2931 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_763 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_1197 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_5146 tsr; methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_4403 methyl-accepting chemotaxis (MCP) signaling domain protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_387 sensory box protein K03776 aer; aerotaxis receptor
D DR55_5080 sensory box protein K03776 aer; aerotaxis receptor
D DR55_4300 ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit K10439 rbsB; ribose transport system substrate-binding protein
D DR55_2892 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_5224 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_2936 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_4555 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_709 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DR55_840 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DR55_1195 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DR55_1196 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D DR55_2823 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D DR55_1194 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DR55_1201 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DR55_4523 cheC-like family protein K03410 cheC; chemotaxis protein CheC
D DR55_5382 cheC-like family protein K03410 cheC; chemotaxis protein CheC
D DR55_1202 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D DR55_1200 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DR55_1199 cheD chemotactic sensory transduction family protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D DR55_1198 cheR methyltransferase, all-alpha domain protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DR55_860 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DR55_1046 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DR55_1045 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DR55_1192 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DR55_1193 motB; motility protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:bpsh02040]
D DR55_858 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DR55_859 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DR55_860 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DR55_861 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D DR55_862 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DR55_863 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D DR55_864 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK
D DR55_1047 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D DR55_1046 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DR55_1045 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DR55_1044 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D DR55_1043 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DR55_1042 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DR55_1041 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DR55_1207 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DR55_1206 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DR55_820 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DR55_819 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DR55_818 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DR55_817 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DR55_816 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE
D DR55_815 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D DR55_814 flgF; flagellar basal-body rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG
D DR55_813 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D DR55_812 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D DR55_811 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D DR55_809 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DR55_808 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D DR55_1182 hypothetical protein K02406 fliC; flagellin
D DR55_4475 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2
D DR55_1181 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2
D DR55_857 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D DR55_856 flagellar FliT family protein K02423 fliT; flagellar protein FliT
D DR55_1180 flagellar FliT family protein K02423 fliT; flagellar protein FliT
D DR55_1192 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DR55_1193 motB; motility protein B K02557 motB; chemotaxis protein MotB
D DR55_821 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D DR55_822 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D DR55_1905 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DR55_2972 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DR55_3509 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D DR55_521 RNA polymerase sigma factor, sigma-70 family protein K03086 rpoD; RNA polymerase primary sigma factor
D DR55_954 RNA polymerase sigma factor, sigma-70 family protein K03086 rpoD; RNA polymerase primary sigma factor
D DR55_1750 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D DR55_1190 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D DR55_1191 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D DR55_5515 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DR55_545 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DR55_1210 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D DR55_2251 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:bpsh04980]
D DR55_1677 cob(I)alamin adenosyltransferase, putative K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D DR55_699 homocysteine S-methyltransferase family protein K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D DR55_700 metH; methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:bpsh01501]
D DR55_4789 gram-negative porin family protein K08720 ompU; outer membrane protein OmpU
D DR55_896 major Facilitator Superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D DR55_3127 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DR55_2092 hypothetical protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D DR55_5586 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DR55_5587 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein
D DR55_5588 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D DR55_5589 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D DR55_5590 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DR55_4388 bla; beta-lactamase Toho-1 K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D DR55_2906 putative transcriptional regulator domain protein K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D DR55_2905 efflux transporter, RND family, MFP subunit K18094 mexX; membrane fusion protein, multidrug efflux system
D DR55_2904 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18095 mexY; multidrug efflux pump
D DR55_306 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system
D DR55_305 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D DR55_2903 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_4207 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_304 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_5797 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_3996 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_1409 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_5120 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_1328 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_5423 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_2482 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_909 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DR55_1482 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_4052 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_4073 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_5732 penicillin binding transpeptidase domain protein K19209 blaOXA-42; beta-lactamase class D OXA-42 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:bpsh01502]
D DR55_4380 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DR55_1490 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DR55_2405 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DR55_4637 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DR55_1484 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D DR55_1485 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DR55_1488 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:bpsh01503]
D DR55_2587 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53]
D DR55_2584 polysaccharide deacetylase family protein K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-]
D DR55_261 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DR55_2083 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_311 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_3117 PDZ domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_704 dsbA; disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D DR55_2334 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DR55_306 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system
D DR55_305 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D DR55_3996 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_1409 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_2436 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:bpsh01000]
C 01001 Protein kinases [BR:bpsh01001]
D DR55_3688 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DR55_1740 exopolysaccharide transport family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DR55_5752 cobQ/CobB/MinD/ParA nucleotide binding domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DR55_5908 capsular exopolysaccharide family domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DR55_3232 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DR55_97 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DR55_2492 putative oxidative stress related two component system, sensor kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DR55_4294 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_5734 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_4618 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_3435 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D DR55_1034 his Kinase A domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D DR55_4644 HAMP domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D DR55_4721 his Kinase A domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DR55_312 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DR55_3815 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DR55_4663 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DR55_2207 GAF domain protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D DR55_3920 response regulator K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D DR55_2749 hpt domain protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D DR55_5249 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D DR55_5411 histidine kinase family protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D DR55_2203 sensory box protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DR55_918 HAMP domain protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DR55_5303 his Kinase A domain protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D DR55_656 his Kinase A domain protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D DR55_4525 PAS fold family protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DR55_3625 his Kinase A domain protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DR55_1195 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DR55_5865 cheW-like domain protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D DR55_889 his Kinase A domain protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:bpsh01009]
D DR55_1211 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DR55_46 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG
D DR55_2658 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:bpsh01002]
D DR55_212 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D DR55_1504 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DR55_2921 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DR55_3007 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DR55_5547 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DR55_1074 peptidase C26 family protein K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DR55_2457 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D DR55_2183 peptidase C26 family protein K07010 K07010; putative glutamine amidotransferase
D DR55_4880 peptidase C26 family protein K07010 K07010; putative glutamine amidotransferase
D DR55_3999 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D DR55_1410 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D DR55_3577 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D DR55_1343 glutamine amidotransferases class-II family protein K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D DR55_583 SIS domain protein K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_3288 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_5715 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_774 glmS; glutamine-fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D DR55_5199 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DR55_4673 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DR55_411 asnB; asparagine synthase K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D DR55_466 intracellular protease, PfpI family protein K05520 yhbO; deglycase [EC:3.5.1.124]
D DR55_5874 thiJ/PfpI family protein K18199 inhA; cyclohexyl-isocyanide hydratase [EC:4.2.1.103]
D DR55_2444 hypothetical protein K25587 E3.4.17.25; glutathione-S-conjugate glycine hydrolase [EC:3.4.17.25]
D DR55_5869 CAAX protease self-immunity family protein K07052 K07052; CAAX protease family protein
D DR55_4314 CAAX protease self-immunity family protein K07052 K07052; CAAX protease family protein
D DR55_1965 pepN; aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DR55_1414 peptidase M1 family protein K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D DR55_2216 peptidase M3 family protein K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D DR55_4152 peptidase M3 family protein K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D DR55_3720 thermolysin metallopeptidase, catalytic domain protein K20273 zmpA; zinc metalloprotease ZmpA
D DR55_4787 peptidase propeptide and YPEB domain protein K20274 zmpB; zinc metalloprotease ZmpB
D DR55_4509 collagenase family protein K01387 colA; microbial collagenase [EC:3.4.24.3]
D DR55_4684 collagenase family protein K01387 colA; microbial collagenase [EC:3.4.24.3]
D DR55_4380 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DR55_1407 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D DR55_166 hypothetical protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D DR55_4803 membrane dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D DR55_2412 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D DR55_5085 amidohydrolase family protein K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D DR55_5214 amidohydrolase family protein K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D DR55_4770 peptidase M23 family protein K08642 lasA; LasA protease [EC:3.4.24.-]
D DR55_2423 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DR55_2368 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D DR55_3355 metallopeptidase M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DR55_1434 metallopeptidase M24 family protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DR55_1625 hypothetical protein K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D DR55_4788 peptidase M20/M25/M40 family protein K05994 E3.4.11.10; bacterial leucyl aminopeptidase [EC:3.4.11.10]
D DR55_3241 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DR55_4213 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DR55_2029 peptidase M48 family protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DR55_921 peptidase M48 family protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D DR55_333 peptidase M48 family protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-]
D DR55_2431 rseP; RIP metalloprotease RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D DR55_3979 D-aminopeptidase family protein K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D DR55_2608 glucose-regulated metallo-peptidase M90 family protein K09933 mtfA; MtfA peptidase
D DR55_4593 peptidase S58 family protein K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D DR55_3978 peptidase S58 family protein K01266 dmpA; D-aminopeptidase [EC:3.4.11.19]
D DR55_2083 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_311 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_3117 PDZ domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_1377 peptidase Do family protein K04772 degQ; serine protease DegQ [EC:3.4.21.-]
D DR55_4359 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D DR55_5736 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D DR55_3933 hypothetical protein K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D DR55_676 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DR55_4053 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DR55_2224 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D DR55_4899 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D DR55_80 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D DR55_314 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D DR55_2514 clpP; ATP-dependent Clp endopeptidase, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D DR55_4696 hydrolase CocE/NonD family protein K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D DR55_5737 hydrolase CocE/NonD family protein K01281 pepX; X-Pro dipeptidyl-peptidase [EC:3.4.14.11]
D DR55_844 AAA domain family protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DR55_2516 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D DR55_2942 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D DR55_2086 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D DR55_5160 pip; prolyl aminopeptidase K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D DR55_2006 lipase family protein K01054 MGLL; acylglycerol lipase [EC:3.1.1.23]
D DR55_639 hypothetical protein K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D DR55_364 penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D DR55_2802 penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D DR55_5161 penicillin amidase family protein K01434 pac; penicillin G amidase [EC:3.5.1.11]
D DR55_2068 clp protease family protein K04773 sppA; protease IV [EC:3.4.21.-]
D DR55_2441 pcp; pseudomonalisin K05998 E3.4.21.100; pseudomonalisin [EC:3.4.21.100]
D DR55_3532 pcp; pseudomonalisin K05998 E3.4.21.100; pseudomonalisin [EC:3.4.21.100]
D DR55_5757 pcp; pseudomonalisin K05999 E3.4.21.101; xanthomonalisin [EC:3.4.21.101]
D DR55_3713 scpA; kumamolisin K08677 kscP; kumamolisin [EC:3.4.21.123]
D DR55_2463 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D DR55_886 hslV; ATP-dependent protease HslVU, peptidase subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D DR55_3973 iaaA; isoaspartyl peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D DR55_3995 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_668 ggt; gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_401 gamma-glutamyltranspeptidase family protein K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D DR55_2160 peptidase U32 family protein K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV
D DR55_2159 hypothetical protein K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU
D DR55_2033 modulator of DNA gyrase family protein K03592 pmbA; PmbA protein
D DR55_1681 modulator of DNA gyrase family protein K03568 tldD; TldD protein
D DR55_81 ecotin family protein K08276 eco; ecotin
D DR55_4521 MG2 domain protein K06894 yfhM; alpha-2-macroglobulin
D DR55_2636 hflC; HflC protein K04087 hflC; modulator of FtsH protease HflC
D DR55_2635 hflK; HflK protein K04088 hflK; modulator of FtsH protease HflK
C 01003 Glycosyltransferases [BR:bpsh01003]
D DR55_2122 glycosyl transferase 2 family protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D DR55_796 glycosyl transferase 2 family protein K00720 UGCG; ceramide glucosyltransferase [EC:2.4.1.80]
D DR55_3697 bcsA; cellulose synthase catalytic subunit UDP-forming K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12]
D DR55_1541 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DR55_4522 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DR55_5120 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_1328 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_5423 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_2482 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_3927 alpha/beta hydrolase family protein K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D DR55_4816 alpha/beta hydrolase family protein K18100 rhlA; rhamnosyltransferase subunit A [EC:2.4.1.-]
D DR55_3928 hypothetical protein K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D DR55_4815 hypothetical protein K18101 rhlB; rhamnosyltransferase subunit B [EC:2.4.1.-]
D DR55_4808 lsdA; levansucrase K00692 sacB; levansucrase [EC:2.4.1.10]
D DR55_90 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
D DR55_2109 otsA; alpha,alpha-trehalose-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:bpsh01005]
D DR55_2436 lpxA; acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D DR55_2437 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D DR55_1730 UDP-3-O-acyl N-acetylglycosamine deacetylase family protein K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DR55_1495 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D DR55_2434 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D DR55_2332 lpxH; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D DR55_242 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D DR55_879 bacterial lipid A biosynthesis acyltransferase family protein K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D DR55_3853 aspartyl/Asparaginyl beta-hydroxylase family protein K12979 lpxO; beta-hydroxylase [EC:1.14.11.-]
D DR55_1856 glycosyl transferases group 1 family protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D DR55_573 lipid A 3-O-deacylase family protein K12976 pagL; lipid A 3-O-deacylase [EC:3.1.1.-]
D DR55_1746 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DR55_2250 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D DR55_244 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D DR55_1747 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DR55_540 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D DR55_1748 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DR55_539 sugar isomerase, KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D DR55_2000 rfaE; bifunctional protein RfaE K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D DR55_689 rfaE; bifunctional protein RfaE K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D DR55_1854 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DR55_1930 rfaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D DR55_329 rfaF; lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D DR55_11 glycosyltransferase 9 family protein K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D DR55_1723 gmhA; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DR55_1228 SIS domain protein K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D DR55_1725 gmhB; D,D-heptose 1,7-bisphosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DR55_427 HAD hydrolase, family IIIA domain protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DR55_5475 HAD hydrolase, IA, variant 1 family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D DR55_2001 rfaD; ADP-glyceromanno-heptose 6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D DR55_3930 rhamnosyltransferase family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D DR55_4813 rhamnosyltransferase family protein K12990 rfbF; rhamnosyltransferase [EC:2.4.1.-]
D DR55_5553 glycosyl transferase 2 family protein K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:bpsh01011]
D DR55_1361 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DR55_4348 EPSP synthase family protein K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D DR55_252 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D DR55_1489 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D DR55_1486 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D DR55_1483 murE; UDP-N-acetylmuramyl-tripeptide synthetase family protein K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D DR55_1490 D-alanine--D-alanine ligase family protein K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D DR55_2405 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DR55_4637 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D DR55_4969 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D DR55_2463 LD-carboxypeptidase family protein K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D DR55_1485 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D DR55_1488 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D DR55_3212 bacitracin resistance BacA family protein K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DR55_1876 uppP; undecaprenyl-diphosphatase UppP K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DR55_5352 PAP2 superfamily protein K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D DR55_248 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D DR55_5120 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_1328 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_5423 penicillin binding transpeptidase domain protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_2482 penicillin-binding , 1A family protein K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D DR55_4522 pbpC; penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D DR55_909 mrdA; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D DR55_1482 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_4052 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_4073 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_676 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DR55_4053 D-alanyl-D-alanine carboxypeptidase family protein K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D DR55_314 dacB; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-]
D DR55_2224 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D DR55_4899 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D DR55_80 D-alanyl-D-alanine carboxypeptidase family protein K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-]
D DR55_1541 mtgA; monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D DR55_4380 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DR55_1407 D-alanyl-D-alanine carboxypeptidase family protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D DR55_827 transglycosylase SLT domain protein K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DR55_1462 mltA specific insert domain protein K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29]
D DR55_2004 mltB; lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D DR55_3252 lysM domain protein K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D DR55_2550 yceG-like family protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D DR55_1225 rlpA; rare lipoA family protein K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D DR55_261 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DR55_2977 amiD; N-acetylmuramoyl-L-alanine amidase AmiD K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DR55_1522 N-acetylmuramoyl-L-alanine amidase family protein K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:bpsh01004]
D DR55_2075 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DR55_3263 mdcH; malonate decarboxylase, epsilon subunit K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D DR55_4868 pqsD; PQB biosynthetic 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DR55_2074 fabH; 3-oxoacyl-(Acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DR55_1175 fabH; 3-oxoacyl-(Acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DR55_1177 fabH; 3-oxoacyl-(Acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D DR55_2078 fabF; beta-ketoacyl-acyl-carrier-protein synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D DR55_4032 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_3443 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_2076 fabG; 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_4470 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_113 short chain dehydrogenase family protein K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D DR55_2435 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D DR55_2375 fabI; enoyl-[acyl-carrier-protein] reductase [NADH] K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DR55_4625 short chain dehydrogenase family protein K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D DR55_3131 NAD(P)H binding domain of trans-2-enoyl-CoA reductase family protein K00209 fabV; enoyl-[acyl-carrier protein] reductase / trans-2-enoyl-CoA reductase (NAD+) [EC:1.3.1.9 1.3.1.44]
D DR55_2526 GDSL-like Lipase/Acylhydrolase family protein K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]
D DR55_439 thioesterase superfamily protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D DR55_5681 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DR55_5684 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DR55_206 fatty acid desaturase family protein K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D DR55_2139 fatty acid desaturase family protein K10255 FAD6; acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]
D DR55_4964 acs; acetate--CoA ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_4734 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_3216 AMP-binding enzyme family protein K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D DR55_1476 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_2990 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_5685 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_256 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_1111 AMP-binding enzyme family protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D DR55_2826 AMP-binding enzyme family protein K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D DR55_2073 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D DR55_254 plsY; acyl-phosphate glycerol 3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D DR55_1831 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D DR55_428 acyltransferase family protein K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:bpsh01008]
D DR55_4020 mbtH; protein mbtH K05375 mbtH; MbtH protein
D DR55_2884 mbtH-like family protein K05375 mbtH; MbtH protein
D DR55_2818 mbtH-like family protein K05375 mbtH; MbtH protein
D DR55_4766 AMP-binding enzyme family protein K12238 pchD; salicylate---[aryl-carrier protein] ligase [EC:6.2.1.61]
D DR55_4764 amino acid adenylation domain protein K12239 pchE; L-cysteine---[L-cysteinyl-carrier protein] ligase PchE [EC:6.2.1.69]
D DR55_4763 amino acid adenylation domain protein K12240 pchF; L-cysteine---[L-cysteinyl-carrier protein] ligase PchF [EC:6.2.1.69]
D DR55_5720 FAD dependent oxidoreductase family protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
D DR55_4322 FAD binding domain protein K14257 ctcP; tetracycline 7-halogenase / FADH2 O2-dependent halogenase [EC:1.14.19.49 1.14.19.-]
D DR55_4144 cytC3; cytC3 K15650 cmaB; non-haem Fe2+, alpha-ketoglutarate-dependent halogenase
D DR55_5926 cytC3; cytC3 K15650 cmaB; non-haem Fe2+, alpha-ketoglutarate-dependent halogenase
D DR55_5048 fabD; malonyl CoA-acyl carrier protein transacylase K15327 pksC; polyketide biosynthesis malonyl-CoA-[acyl-carrier-protein] transacylase
D DR55_4335 pksF; polyketide biosynthesis malonyl-ACP decarboxylase PksF K00646 pksF; malonyl-[acp] decarboxylase [EC:4.1.1.124]
D DR55_4334 acpK; polyketide biosynthesis acyl-carrier-protein AcpK K15337 acpK; polyketide biosynthesis acyl carrier protein
D DR55_4331 pksG; polyketide biosynthesis 3-hydroxy-3-methylglutaryl-ACP synthase pksG K15311 pksG; 3-carboxymethyl-3-hydroxy-acyl-[acp] synthase [EC:2.3.3.22]
D DR55_4332 putative polyketide biosynthesis enoyl-CoA hydratase pksH K15312 pksH; 3-carboxymethyl-3-hydroxy-acyl-[acp] dehydratase [EC:4.2.1.181]
D DR55_4333 putative polyketide biosynthesis enoyl-CoA isomerase pksI K15313 pksI; 4-carboxy-3-alkylbut-2-enoyl-[acp] decarboxylase [EC:4.1.1.125]
D DR55_4762 thiazolinyl imide reductase family protein K12241 pchG; pyochelin biosynthesis protein PchG
D DR55_4767 rifR; rifR K12242 pchC; pyochelin biosynthesis protein PchC
D DR55_4511 cys/Met metabolism PLP-dependent enzyme family protein K04127 cefD; isopenicillin-N epimerase [EC:5.1.1.17]
C 01006 Prenyltransferases [BR:bpsh01006]
D DR55_3501 polyprenyl synthetase family protein K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]
D DR55_1509 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D DR55_2428 uppS; di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D DR55_5128 squalene/phytoene synthase family protein K00801 FDFT1; farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
D DR55_2497 hpnD; squalene synthase HpnD K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D DR55_1703 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DR55_1657 ubiA; 4-hydroxybenzoate polyprenyl transferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D DR55_619 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:bpsh01007]
D DR55_2382 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DR55_3124 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DR55_19 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D DR55_1613 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DR55_2261 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DR55_5872 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DR55_2336 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DR55_702 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DR55_133 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DR55_3965 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DR55_211 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DR55_3091 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DR55_1578 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DR55_4517 tRNA synthetases class I (C) catalytic domain protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DR55_2240 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DR55_449 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DR55_2629 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DR55_425 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DR55_426 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DR55_1920 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DR55_1516 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DR55_3054 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DR55_3121 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DR55_3050 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DR55_3049 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DR55_2592 aminotransferase class-V family protein K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D DR55_5534 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4984 aminotransferase class I and II family protein K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_4531 tyrB; aromatic-amino-acid aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57]
D DR55_3370 beta-eliminating lyase family protein K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D DR55_1122 cys/Met metabolism PLP-dependent enzyme family protein K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D DR55_2415 dapC; succinyldiaminopimelate transaminase K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17]
D DR55_2816 aminotransferase class I and II family protein K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_1364 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_560 hisC; histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D DR55_5366 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D DR55_719 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DR55_1731 cys/Met metabolism PLP-dependent enzyme family protein K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D DR55_1869 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DR55_4603 aminotransferase class-III family protein K00822 E2.6.1.18; beta-alanine--pyruvate transaminase [EC:2.6.1.18]
D DR55_190 argD; transaminase, acetylornithine/succinylornithine family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D DR55_2131 astC; succinylornithine transaminase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81]
D DR55_5073 gabT; 4-aminobutyrate transaminase K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19]
D DR55_604 2,4-diaminobutyrate 4-transaminase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D DR55_3635 2,4-diaminobutyrate 4-transaminase family protein K00836 ectB; diaminobutyrate-2-oxoglutarate transaminase [EC:2.6.1.76]
D DR55_2185 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D DR55_4882 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D DR55_5040 aminotransferase K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D DR55_4467 aminotransferase class-III family protein K12256 spuC; putrescine---pyruvate transaminase [EC:2.6.1.113]
D DR55_718 bioA; adenosylmethionine-8-amino-7-oxononanoate transaminase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D DR55_5565 aminotransferase class-III family protein K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DR55_1897 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D DR55_675 aminotransferase class IV family protein K00824 dat; D-alanine transaminase [EC:2.6.1.21]
D DR55_327 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_5929 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D DR55_1694 pabB; aminodeoxychorismate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D DR55_4845 2-aminoethylphosphonate aminotransferase family protein K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D DR55_5004 phnW; 2-aminoethylphosphonate--pyruvate transaminase K03430 phnW; 2-aminoethylphosphonate-pyruvate transaminase [EC:2.6.1.37]
D DR55_2361 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_1991 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D DR55_4931 perosamine synthetase domain protein K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:bpsh00194]
D DR55_1110 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DR55_5781 ATP synthase, Delta/Epsilon chain, beta-sandwich domain protein K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D DR55_1109 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DR55_5780 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D DR55_1108 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DR55_5788 ATP synthase family protein K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D DR55_1107 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DR55_5787 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D DR55_1106 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D DR55_1105 atpF; ATP synthase F0, B subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DR55_5786 ATP synthase delta (OSCP) subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D DR55_1104 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DR55_5785 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D DR55_1103 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DR55_5784 ATP synthase A chain family protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DR55_1102 ATP synthase I chain family protein K02116 atpI; ATP synthase protein I
D DR55_5782 F0F1-ATPase subunit family protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:bpsh03000]
D DR55_525 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DR55_1137 helix-turn-helix domain protein K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator
D DR55_4765 helix-turn-helix domain protein K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D DR55_1787 helix-turn-helix domain protein K07506 K07506; AraC family transcriptional regulator
D DR55_957 ada; bifunctional transcriptional activator/DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D DR55_4702 helix-turn-helix domain protein K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA
D DR55_4786 helix-turn-helix domain protein K17736 cdhR; AraC family transcriptional regulator, carnitine catabolism transcriptional activator
D DR55_2130 argR; transcriptional regulator K21825 argR; AraC family transcriptional regulator, L-arginine-responsive activator
D DR55_4805 helix-turn-helix domain protein K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D DR55_3851 helix-turn-helix domain protein K21826 gbdR; AraC family transcriptional regulator, glycine betaine-responsive activator
D DR55_4387 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DR55_673 gcvA; glycine cleavage system transcriptional activator K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DR55_806 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DR55_5605 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DR55_4746 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DR55_5617 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DR55_5111 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DR55_5231 bacterial regulatory helix-turn-helix , lysR family protein K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator
D DR55_3982 pcaQ; pca operon transcription factor PcaQ K02623 pcaQ; LysR family transcriptional regulator, pca operon transcriptional activator
D DR55_1963 bacterial regulatory helix-turn-helix , lysR family protein K03576 metR; LysR family transcriptional regulator, regulator for metE and metH
D DR55_5705 bacterial regulatory helix-turn-helix , lysR family protein K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA
D DR55_1651 bacterial regulatory helix-turn-helix , lysR family protein K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D DR55_5122 argP; transcriptional regulator, ArgP family protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D DR55_5341 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D DR55_1568 cynR; HTH-type transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator
D DR55_176 bacterial regulatory helix-turn-helix , lysR family protein K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator
D DR55_2937 bacterial regulatory helix-turn-helix , lysR family protein K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator
D DR55_5086 bacterial regulatory helix-turn-helix , lysR family protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D DR55_5213 bacterial regulatory helix-turn-helix , lysR family protein K14057 abgR; LysR family transcriptional regulator, regulator of abg operon
D DR55_5359 dmlR; HTH-type transcriptional regulator DmlR K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D DR55_384 lysR substrate binding domain protein K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA
D DR55_5060 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D DR55_3285 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D DR55_363 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D DR55_1590 bacterial regulatory helix-turn-helix , lysR family protein K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
D DR55_4604 bacterial regulatory helix-turn-helix , lysR family protein K21699 bauR; LysR family transcriptional regulator, transcriptional activator for bauABCD operon
D DR55_5845 bacterial regulatory helix-turn-helix , lysR family protein K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D DR55_5833 benM; HTH-type transcriptional regulator BenM K21757 benM; LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
D DR55_402 hypothetical protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D DR55_3801 hypothetical protein K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
D DR55_4807 bacterial regulatory s, lacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DR55_2933 periplasmic binding s and sugar binding domain of LacI family protein K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D DR55_2694 periplasmic binding s and sugar binding domain of LacI family protein K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor
D DR55_1660 phnF; phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein
D DR55_2177 hutC; histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor
D DR55_585 UTRA domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D DR55_229 UTRA domain protein K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator
D DR55_3547 gntR-family transcriptional regulator K03710 K03710; GntR family transcriptional regulator
D DR55_3952 UTRA domain protein K03710 K03710; GntR family transcriptional regulator
D DR55_1569 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DR55_5027 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DR55_3861 bacterial regulatory s, gntR family protein K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D DR55_4850 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DR55_3290 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DR55_4092 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DR55_3527 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DR55_5072 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DR55_3203 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DR55_4620 aminotransferase class I and II family protein K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D DR55_2768 bacterial regulatory s, gntR family protein K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
D DR55_2757 bacterial regulatory s, gntR family protein K23466 tgnR; GntR family transcriptional regulator, trigonelline degradation regulator
D DR55_3926 betI; transcriptional repressor BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes
D DR55_307 ttgR; HTH-type transcriptional regulator ttgR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor
D DR55_893 bacterial regulatory s, tetR family protein K05501 slmA; TetR/AcrR family transcriptional regulator
D DR55_5083 bacterial regulatory s, tetR family protein K09017 rutR; TetR/AcrR family transcriptional regulator
D DR55_4629 bacterial regulatory s, tetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D DR55_2369 bacterial regulatory s, tetR family protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D DR55_2906 putative transcriptional regulator domain protein K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D DR55_5693 bacterial regulatory s, tetR family protein K22108 kstR2; TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
D DR55_756 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_1253 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_2014 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_3289 asnC-type helix-turn-helix domain protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_1082 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_3558 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_4424 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_270 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_3711 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_4533 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_1222 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_3328 asnC family protein K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
D DR55_745 asnC family protein K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon
D DR55_4449 sigma-70, region 4 family protein K19666 solR; LuxR family transcriptional regulator, quorum-sensing system regulator SolR
D DR55_3706 bacterial regulatory s, luxR family protein K19731 cciR; LuxR family transcriptional regulator, quorum-sensing system regulator CciR
D DR55_5437 bacterial regulatory s, luxR family protein K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein
D DR55_3481 ohrR; transcriptional regulator OhrR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D DR55_4990 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D DR55_2610 merR regulatory family protein K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon
D DR55_1573 ferric uptake regulator family protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D DR55_295 ferric uptake regulator family protein K09823 zur; Fur family transcriptional regulator, zinc uptake regulator
D DR55_5082 beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family protein K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein
D DR55_3334 bacterial transcriptional regulator family protein K20329 qsmR; IclR family transcriptional regulator, positive regulator for flagellar biogenesis
D DR55_237 cyclic nucleotide-binding domain protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D DR55_5340 cyclic nucleotide-binding domain protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DR55_5818 cyclic nucleotide-binding domain protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DR55_4164 cyclic nucleotide-binding domain protein K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D DR55_2157 cyclic nucleotide-binding domain protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D DR55_2231 iscR; iron-sulfur cluster assembly transcription factor IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D DR55_2599 Rrf2 family protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D DR55_2145 Rrf2 family protein K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D DR55_3845 helix-turn-helix domain protein K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D DR55_1016 transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator
D DR55_1583 SIS domain protein K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator
D DR55_686 biotin--[acetyl-CoA-carboxylase] ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D DR55_1622 bacterial regulatory , Fis family protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D DR55_5156 prpR; propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein
D DR55_1934 transcriptional regulator, XRE family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D DR55_3689 helix-turn-helix family protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D DR55_4754 AAA domain family protein K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
D DR55_5236 cdaR; carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator
D DR55_3473 molybdenum-pterin binding domain protein K02019 modE; molybdate transport system regulatory protein
D DR55_2679 cro/C1-type HTH DNA-binding domain protein K07727 K07727; putative transcriptional regulator
D DR55_1117 delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D DR55_2714 4Fe-4S binding domain protein K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator
D DR55_2534 bolA-like family protein K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator
D DR55_1100 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DR55_5373 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DR55_1687 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D DR55_1013 paaX-like family protein K02616 paaX; phenylacetic acid degradation operon negative regulatory protein
D DR55_4456 hypothetical protein K06140 rnk; regulator of nucleoside diphosphate kinase
D DR55_1828 phosphoribosyl transferase domain protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D DR55_2270 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein
D DR55_971 prophage CP4-57 regulatory family protein K07733 alpA; prophage regulatory protein
D DR55_3291 putative FMN-binding domain protein K07734 paiB; transcriptional regulator
D DR55_1826 hypothetical protein K07735 algH; putative transcriptional regulator
D DR55_885 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DR55_1761 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR
D DR55_1479 mraZ family protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:bpsh03021]
D DR55_4479 DEAD_2 family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D DR55_1314 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DR55_1280 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DR55_1281 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DR55_1942 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DR55_3509 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D DR55_521 RNA polymerase sigma factor, sigma-70 family protein K03086 rpoD; RNA polymerase primary sigma factor
D DR55_954 RNA polymerase sigma factor, sigma-70 family protein K03086 rpoD; RNA polymerase primary sigma factor
D DR55_2620 rpoS; RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor
D DR55_2080 rpoE; RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DR55_1001 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DR55_3414 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DR55_4 RNA polymerase sigma-70 factor, family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DR55_4011 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DR55_4310 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DR55_5308 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DR55_5378 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DR55_2572 RNA polymerase sigma factor, sigma-70 family protein K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D DR55_4306 RNA polymerase sigma factor, sigma-70 family protein K23514 fecI; RNA polymerase sigma-19 factor, ECF subfamily
D DR55_574 rpoH; alternative sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor
D DR55_5515 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DR55_545 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D DR55_1210 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA
D DR55_3028 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D DR55_1892 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DR55_1275 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DR55_1382 hypothetical protein K03599 sspA; stringent starvation protein A
D DR55_1383 stringent starvation B family protein K03600 sspB; stringent starvation protein B
D DR55_2081 hypothetical protein K03597 rseA; sigma-E factor negative regulatory protein RseA
D DR55_2082 mucB/RseB family protein K03598 rseB; sigma-E factor negative regulatory protein RseB
D DR55_885 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DR55_3245 greA; transcription elongation factor GreA domain protein K03624 greA; transcription elongation factor GreA
D DR55_1946 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB
D DR55_2611 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:bpsh03019]
D DR55_2064 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D DR55_3452 ribonuclease, Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D DR55_2087 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DR55_2979 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DR55_1558 ribonuclease family protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D DR55_2030 exonuclease family protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D DR55_398 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DR55_20 hypothetical protein K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D DR55_1282 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DR55_2251 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DR55_3402 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D DR55_2611 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D DR55_1692 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DR55_4874 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_1822 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_2994 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DR55_2633 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DR55_3231 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D DR55_4003 ppk2; polyphosphate kinase 2 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D DR55_1698 pcnB; poly(A) polymerase family protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D DR55_1515 NUDIX domain protein K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D DR55_2390 RraA family protein K02553 rraA; regulator of ribonuclease activity A
D DR55_549 P-loop ATPase family protein K06958 rapZ; RNase adapter protein RapZ
D DR55_2196 hrpA; ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6]
C 03041 Spliceosome
C 03011 Ribosome [BR:bpsh03011]
D DR55_1995 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D DR55_2424 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D DR55_1294 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D DR55_1313 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D DR55_1305 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D DR55_2574 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D DR55_1284 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D DR55_1302 ribosomal S8 family protein K02994 RP-S8; small subunit ribosomal protein S8
D DR55_1607 ribosomal S9/S16 family protein K02996 RP-S9; small subunit ribosomal protein S9
D DR55_1287 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D DR55_1312 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D DR55_1283 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D DR55_1311 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D DR55_1301 ribosomal S14p/S29e family protein K02954 RP-S14; small subunit ribosomal protein S14
D DR55_3403 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D DR55_2018 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D DR55_1297 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D DR55_2576 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D DR55_1292 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D DR55_249 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D DR55_3506 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DR55_1183 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D DR55_1277 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D DR55_1291 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D DR55_1288 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D DR55_1289 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D DR55_1300 ribosomal L5 family protein K02931 RP-L5; large subunit ribosomal protein L5
D DR55_1303 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D DR55_2577 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D DR55_1278 ribosomal L10 family protein K02864 RP-L10; large subunit ribosomal protein L10
D DR55_1276 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D DR55_1279 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D DR55_1606 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D DR55_1298 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D DR55_1307 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D DR55_1295 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D DR55_1315 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D DR55_1304 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D DR55_2021 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D DR55_3051 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D DR55_1510 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D DR55_1293 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D DR55_1290 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D DR55_1299 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D DR55_1511 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D DR55_201 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D DR55_1296 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D DR55_1306 rpmD; ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D DR55_2607 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D DR55_2072 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D DR55_202 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D DR55_978 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D DR55_3052 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D DR55_1310 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D DR55_558 ribosomal protein L25, Ctc-form K02897 RP-L25; large subunit ribosomal protein L25
D DR55_1268 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_1474 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_4991 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_3357 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_1263 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_1469 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_4996 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_3362 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_1473 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_4992 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_3358 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_1267 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:bpsh03009]
D DR55_2087 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DR55_2030 exonuclease family protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D DR55_2088 era; GTP-binding protein Era K03595 era; GTPase
D DR55_1512 cgtA; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D DR55_885 dksA; RNA polymerase-binding protein DksA K06204 dksA; RNA polymerase-binding transcription factor
D DR55_3028 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D DR55_1892 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D DR55_1275 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
D DR55_186 pseudouridine synthase family protein K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D DR55_432 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D DR55_920 sun; ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DR55_208 ubiE/COQ5 methyltransferase family protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D DR55_563 RNA methyltransferase, RsmD family K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D DR55_1560 RNA methyltransferase, RsmE family protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D DR55_1098 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DR55_1480 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D DR55_1226 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DR55_2069 tetrapyrrole (Corrin/Porphyrin) Methylases family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D DR55_2978 RNA 2'-O ribose methyltransferase substrate binding family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D DR55_3242 ftsJ-like methyltransferase family protein K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D DR55_3450 rlmH; rRNA large subunit m3Psi methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D DR55_883 met-10+ like-family protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D DR55_4987 ribosomal RNA small subunit methyltransferase D, RsmJ family protein K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266]
D DR55_1635 THUMP domain protein K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D DR55_2626 rlmN; 23S rRNA methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D DR55_2623 rumA; 23S rRNA (uracil-5-)-methyltransferase RumA K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D DR55_3030 pseudouridine synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D DR55_2065 pseudouridine synthase, RluA family protein K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D DR55_2647 pseudouridine synthase, RluA family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D DR55_223 pseudouridine synthase family protein K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D DR55_2421 pseudouridine synthase family protein K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D DR55_2400 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D DR55_2019 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D DR55_2653 rimO; ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D DR55_1531 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D DR55_2411 prmB; (glutamine-N5) methyltransferase, ribosomal protein L3-specific K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298]
D DR55_2266 cupin superfamily protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47]
D DR55_2064 ribonuclease, Rne/Rng family domain protein K08300 rne; ribonuclease E [EC:3.1.26.12]
D DR55_3452 ribonuclease, Rne/Rng family domain protein K08301 rng; ribonuclease G [EC:3.1.26.-]
D DR55_1827 hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D DR55_5218 hypothetical protein K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D DR55_2028 rsgA; ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D DR55_2632 engA; ribosome-associated GTPase EngA K03977 engA; GTPase
D DR55_2634 hflX; GTP-binding protein HflX K03665 hflX; GTPase
D DR55_318 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DR55_1943 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D DR55_3026 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D DR55_3029 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D DR55_2046 S4 domain protein K14761 rlbA; ribosome-associated protein
D DR55_3449 oligomerization domain protein K09710 ybeB; ribosome-associated protein
D DR55_421 putative rRNA maturation factor YbeY K07042 ybeY; probable rRNA maturation factor
D DR55_2032 hypothetical protein K09889 yjgA; ribosome-associated protein
D DR55_546 raiA; ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
D DR55_1445 50S ribosome-binding GTPase family protein K06942 ychF; ribosome-binding ATPase
D DR55_2071 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:bpsh03016]
D DR55_4725 ribonuclease T2 family protein K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D DR55_1558 ribonuclease family protein K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24]
D DR55_824 poly A polymerase head domain protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D DR55_2382 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DR55_1516 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D DR55_3965 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DR55_211 ileS; isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D DR55_1578 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DR55_4517 tRNA synthetases class I (C) catalytic domain protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DR55_133 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D DR55_3124 glnS; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D DR55_702 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DR55_2240 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D DR55_449 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DR55_3121 alaS; alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D DR55_3054 thrS; threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D DR55_1920 serS; serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D DR55_2336 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D DR55_3091 valS; valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D DR55_2629 hisS; histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D DR55_3050 pheS; phenylalanine--tRNA ligase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D DR55_3049 pheT; phenylalanine--tRNA ligase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D DR55_1613 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DR55_2261 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DR55_5872 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D DR55_1614 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D DR55_3428 threonyl and Alanyl tRNA synthetase second additional domain protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D DR55_3963 threonyl and Alanyl tRNA synthetase second additional domain protein K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
D DR55_1373 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DR55_5851 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DR55_1877 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D DR55_3568 truA; tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D DR55_3025 truB; tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D DR55_5608 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DR55_2232 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DR55_318 tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D DR55_1703 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D DR55_974 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D DR55_1097 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DR55_5065 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D DR55_977 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D DR55_1939 rph; ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D DR55_1539 RNB domain protein K01147 rnb; exoribonuclease II [EC:3.1.13.1]
D DR55_1346 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D DR55_1437 ccmA; heme ABC exporter, ATP-binding protein CcmA K06020 ettA; energy-dependent translational throttle protein EttA
D DR55_425 glyQ; glycine--tRNA ligase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D DR55_426 glyS; glycine--tRNA ligase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D DR55_19 gluQ; glutamyl-queuosine tRNA(Asp) synthetase K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-]
D DR55_4286 aminoacyl-tRNA editing domain protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D DR55_2462 cytidine and deoxycytidylate deaminase zinc-binding region family protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D DR55_2954 dusA; tRNA dihydrouridine synthase A family protein K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-]
D DR55_1623 TIM-barrel , nifR3 family protein K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D DR55_419 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D DR55_3463 methyltransferase domain protein K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D DR55_2330 RNA methyltransferase, TrmH , group 1 family protein K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-]
D DR55_2020 trmD; tRNA (guanine(37)-N(1))-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D DR55_632 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D DR55_2439 spoU rRNA Methylase family protein K03437 spoU; RNA methyltransferase, TrmH family
D DR55_1628 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D DR55_772 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D DR55_3098 sulfurtransferase TusA family protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
D DR55_2234 iscA; iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein
D DR55_2549 aminomethyltransferase folate-binding domain protein K06980 ygfZ; tRNA-modifying protein YgfZ
D DR55_1070 mnmC; tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D DR55_1649 queA; tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D DR55_915 queC; queuosine biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D DR55_913 queD; queuosine biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D DR55_914 radical SAM superfamily protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D DR55_461 queF; 7-cyano-7-deazaguanine reductase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D DR55_259 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D DR55_383 selU; tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D DR55_1648 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D DR55_2339 tilS; tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D DR55_2399 yeaZ; tRNA threonylcarbamoyl adenosine modification protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D DR55_3504 tRNA threonylcarbamoyl adenosine modification protein YgjD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D DR55_260 tRNA threonylcarbamoyl adenosine modification protein YjeE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D DR55_265 thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D DR55_2979 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D DR55_3402 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:bpsh03012]
D DR55_3027 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DR55_3053 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DR55_2408 ABC transporter family protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D DR55_2425 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DR55_1272 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DR55_1286 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DR55_225 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DR55_1285 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DR55_3610 selB; selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D DR55_1430 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D DR55_2427 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D DR55_1429 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D DR55_559 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D DR55_1309 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DR55_69 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D DR55_2094 efp; translation elongation factor P K02356 efp; elongation factor P
D DR55_2241 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D DR55_3318 RF-1 domain protein K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:bpsh03110]
D DR55_218 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D DR55_2600 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D DR55_2515 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D DR55_887 hslU; ATP-dependent protease HslVU, ATPase subunit K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D DR55_46 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG
D DR55_1692 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DR55_2236 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA
D DR55_1423 hsp70 family protein K04046 yegD; hypothetical chaperone protein
D DR55_4874 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_1822 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_1693 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DR55_2235 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D DR55_2254 hsp33 family protein K04083 hslO; molecular chaperone Hsp33
D DR55_1690 grpE family protein K03687 GRPE; molecular chaperone GrpE
D DR55_1599 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D DR55_5440 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D DR55_3277 hsp20/alpha crystallin family protein K13993 HSP20; HSP20 family protein
D DR55_1689 S4 domain protein K04762 hslR; ribosome-associated heat shock protein Hsp15
D DR55_1598 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D DR55_1821 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES
D DR55_4875 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES
D DR55_2083 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_311 peptidase Do family protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_3117 PDZ domain protein K04771 degP; serine protease Do [EC:3.4.21.107]
D DR55_3241 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DR55_4213 hflB; ATP-dependent metallopeptidase HflB family protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D DR55_1103 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DR55_5784 ATP synthase A chain family protein K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D DR55_2739 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_3139 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_123 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_2899 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_635 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DR55_2699 LTXXQ motif family protein K06006 cpxP; periplasmic protein CpxP/Spy
D DR55_2106 hypothetical protein K09796 pccA; periplasmic copper chaperone A
D DR55_4359 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D DR55_5736 subtilase family protein K14645 K14645; serine protease [EC:3.4.21.-]
D DR55_580 chb; chitobiase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D DR55_2334 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DR55_2333 cyp18; peptidyl-prolyl cis-trans isomerase cyp18 K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D DR55_2525 PPIC-type PPIASE domain protein K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D DR55_5915 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8]
D DR55_199 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D DR55_2268 FKBP-type peptidyl-prolyl cis-trans isomerase family protein K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D DR55_2533 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D DR55_4172 PPIC-type PPIASE domain protein K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D DR55_434 PPIC-type PPIASE domain protein K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D DR55_2612 trxA; thioredoxin K03671 TXN; thioredoxin
D DR55_5285 thioredoxin family protein K03671 TXN; thioredoxin
D DR55_264 trxA; thioredoxin K05838 ybbN; putative thioredoxin
D DR55_636 grxC; glutaredoxin 3 K03676 grxC; glutaredoxin 3
D DR55_1428 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D DR55_704 dsbA; disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15]
D DR55_1972 disulfide bond formation DsbB family protein K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9]
D DR55_1449 DSBA-like thioredoxin domain protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DR55_1317 cytochrome C biogenesis transmembrane region family protein K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:bpsh04131]
D DR55_2625 nucleoside diphosphate kinase family protein K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D DR55_1967 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D DR55_1564 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DR55_638 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D DR55_5237 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DR55_323 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DR55_46 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system
C 03051 Proteasome [BR:bpsh03051]
D DR55_46 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:bpsh03032]
D DR55_3255 RNase H family protein K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D DR55_525 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DR55_1069 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D DR55_3048 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DR55_1996 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DR55_979 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DR55_2578 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D DR55_3508 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D DR55_530 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D DR55_17 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DR55_980 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DR55_165 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DR55_1580 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DR55_2552 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DR55_3256 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_1951 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_2613 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DR55_2438 ribonuclease HII family protein K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D DR55_3493 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DR55_2419 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DR55_2313 D12 class N6 adenine-specific DNA methyltransferase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DR55_1700 hda; DnaA regulatory inactivator Hda K10763 hda; DnaA-homolog protein
D DR55_1989 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DR55_981 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DR55_62 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DR55_63 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DR55_927 topB; DNA topoisomerase III family protein K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:bpsh03036]
D DR55_525 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DR55_2087 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D DR55_3146 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_3181 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_1188 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_1220 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_3746 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_4489 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_5305 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_5597 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_4236 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_2752 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_5240 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_4543 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_1069 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D DR55_3048 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DR55_1996 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DR55_979 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D DR55_1655 ferritin-like domain protein K04047 dps; starvation-inducible DNA-binding protein
D DR55_1622 bacterial regulatory , Fis family protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D DR55_2994 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DR55_2633 hfq; RNA chaperone Hfq K03666 hfq; host factor-I protein
D DR55_5122 argP; transcriptional regulator, ArgP family protein K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D DR55_5341 transcriptional regulator, LysR family K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor
D DR55_756 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_1253 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_2014 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_3289 asnC-type helix-turn-helix domain protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_1082 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_3558 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_4424 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_270 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_3711 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_4533 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_1222 asnC family protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D DR55_2417 smc; chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D DR55_140 scpA/B family protein K05896 scpA; segregation and condensation protein A
D DR55_3031 scpB; segregation and condensation protein B K06024 scpB; segregation and condensation protein B
D DR55_1492 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DR55_2252 septum formation initiator family protein K05589 ftsB; cell division protein FtsB
D DR55_1482 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_4052 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_4073 penicillin binding transpeptidase domain protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D DR55_25 ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DR55_1916 ftsK/SpoIIIE family protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D DR55_1481 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL
D DR55_1491 cell division FtsQ family protein K03589 ftsQ; cell division protein FtsQ
D DR55_1487 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DR55_1493 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DR55_157 cell division ZapA family protein K09888 zapA; cell division protein ZapA
D DR55_1502 hypothetical protein K18778 zapD; cell division protein ZapD
D DR55_3014 AFG1-like ATPase family protein K06916 zapE; cell division protein ZapE
D DR55_261 N-acetylmuramoyl-L-alanine amidase family protein K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DR55_306 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system
D DR55_1924 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D DR55_1925 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D DR55_1926 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D DR55_893 bacterial regulatory s, tetR family protein K05501 slmA; TetR/AcrR family transcriptional regulator
D DR55_906 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DR55_4719 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DR55_907 mreC; rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D DR55_908 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D DR55_910 mrdB; rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D DR55_4274 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DR55_1099 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DR55_143 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DR55_5374 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DR55_1100 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DR55_5373 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DR55_62 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DR55_63 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DR55_1097 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D DR55_1098 gidB; 16S rRNA (guanine(527)-N(7))-methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D DR55_882 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D DR55_257 xerD; tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D DR55_1154 phage integrase family protein K04763 xerD; integrase/recombinase XerD
D DR55_131 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DR55_1319 ysxC; ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:bpsh03400]
D DR55_258 methylated-DNA-[]-cysteine S-methyltransferase family protein K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D DR55_2171 FAD binding domain of DNA photolyase family protein K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D DR55_1452 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D DR55_551 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D DR55_31 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D DR55_4479 DEAD_2 family protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D DR55_1500 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DR55_4219 NUDIX domain protein K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D DR55_214 dut; dUTP diphosphatase family protein K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D DR55_957 ada; bifunctional transcriptional activator/DNA repair enzyme Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63]
D DR55_5497 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DR55_2401 uracil-DNA glycosylase, 4 family protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D DR55_2337 hhH-GPD superbase excision DNA repair family protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D DR55_956 hypothetical protein K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
D DR55_1184 methyladenine glycosylase family protein K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D DR55_552 mutM; formamidopyrimidine-DNA glycosylase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D DR55_901 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DR55_2205 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D DR55_2242 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D DR55_2419 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D DR55_3493 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D DR55_5307 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DR55_532 uvrA; excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D DR55_4983 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D DR55_2096 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C
D DR55_3090 hypothetical protein K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D DR55_1280 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D DR55_1281 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D DR55_1314 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D DR55_1942 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D DR55_2487 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D DR55_2269 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D DR55_1704 mutL; DNA mismatch repair MutL family protein K03572 mutL; DNA mismatch repair protein MutL
D DR55_241 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D DR55_3500 xseB; exodeoxyribonuclease VII, small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D DR55_17 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D DR55_980 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D DR55_165 DNA polymerase III chi subunit, HolC family protein K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7]
D DR55_1580 holA; DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D DR55_2552 holB; DNA polymerase III, delta' subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D DR55_3256 dnaQ; DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_1951 exonuclease, DNA polymerase III, epsilon subunit family domain protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D DR55_2613 dnaX; DNA polymerase III, subunit gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D DR55_530 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D DR55_2313 D12 class N6 adenine-specific DNA methyltransferase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DR55_3320 recB; exodeoxyribonuclease V, beta subunit K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D DR55_3321 recC; exodeoxyribonuclease V, gamma subunit K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]
D DR55_3319 recD; exodeoxyribonuclease V, alpha subunit K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D DR55_344 recA; protein RecA K03553 recA; recombination protein RecA
D DR55_1619 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D DR55_1618 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D DR55_1620 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D DR55_1115 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D DR55_2575 putative primosomal replication protein n K02686 priB; primosomal replication protein N
D DR55_2406 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D DR55_1650 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D DR55_2089 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D DR55_2615 recR; recombination protein RecR K06187 recR; recombination protein RecR
D DR55_1685 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D DR55_5521 Ku protein K10979 ku; DNA end-binding protein Ku
D DR55_5522 ligD; DNA ligase D K01971 ligD; bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
D DR55_1989 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D DR55_981 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D DR55_1069 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D DR55_1622 bacterial regulatory , Fis family protein K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein
D DR55_3048 ihfA; integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha
D DR55_1996 ihfB; integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta
D DR55_1282 recQ; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D DR55_3146 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_3181 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_1188 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_1220 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_3746 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_4489 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_5305 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_5597 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_4236 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_2752 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_5240 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_4543 H-NS histone family protein K03746 hns; DNA-binding protein H-NS
D DR55_2215 hypothetical protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D DR55_2942 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D DR55_610 putative cell division inhibitor protein K14160 imuA; protein ImuA
D DR55_609 impB/mucB/samB family protein K14161 imuB; protein ImuB
D DR55_608 dnaE; DNA polymerase III, alpha subunit K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D DR55_343 recX family protein K03565 recX; regulatory protein
D DR55_4898 PHP domain protein K02347 polX; DNA polymerase (family X)
D DR55_1150 hypothetical protein K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4]
D DR55_2645 DEAD_2 family protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D DR55_3992 DEAD/H associated family protein K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D DR55_1523 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DR55_5447 ribonucleotide reductase, barrel domain protein K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DR55_4872 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D DR55_1524 ribonucleotide reductase, small chain family protein K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:bpsh03029]
D DR55_1380 hypothetical protein K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D DR55_3027 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D DR55_3053 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D DR55_2425 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D DR55_1272 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DR55_1286 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DR55_225 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DR55_1285 fusA; translation elongation factor G K02355 fusA; elongation factor G
D DR55_2088 era; GTP-binding protein Era K03595 era; GTPase
D DR55_1613 tyrS; tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D DR55_1578 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DR55_4517 tRNA synthetases class I (C) catalytic domain protein K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D DR55_449 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D DR55_702 argS; arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D DR55_904 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DR55_1973 amidase family protein K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D DR55_903 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D DR55_905 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D DR55_530 ssb; single-stranded DNA-binding family protein K03111 ssb; single-strand DNA-binding protein
D DR55_2432 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D DR55_1692 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DR55_1690 grpE family protein K03687 GRPE; molecular chaperone GrpE
D DR55_4874 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_1822 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_1598 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D DR55_1821 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES
D DR55_4875 chaperonin 10 Kd subunit K04078 groES; chaperonin GroES
D DR55_1693 dnaJ; chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D DR55_5608 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DR55_2232 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DR55_2235 hscB; Fe-S protein assembly co-chaperone HscB K04082 hscB; molecular chaperone HscB
D DR55_1428 grxD; monothiol glutaredoxin, Grx4 family K07390 grxD; monothiol glutaredoxin
D DR55_131 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D DR55_619 cyoE; protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141]
D DR55_626 cytochrome c oxidase assembly CtaG/Cox11 family protein K02258 COX11; cytochrome c oxidase assembly protein subunit 11
D DR55_620 cytochrome oxidase assembly family protein K02259 COX15; heme a synthase [EC:1.17.99.9]
D DR55_976 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DR55_622 SURF1 family protein K14998 SURF1; surfeit locus 1 family protein
D DR55_618 redoxin family protein K07152 SCO1; protein SCO1
D DR55_3620 SCO1/SenC family protein K07152 SCO1; protein SCO1
D DR55_2107 ahpC/TSA family protein K07152 SCO1; protein SCO1
D DR55_3785 redoxin family protein K07152 SCO1; protein SCO1
D DR55_741 ahpC/TSA family protein K07152 SCO1; protein SCO1
D DR55_46 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:bpsh02000]
D DR55_16 msbA; lipid A export permease/ATP-binding protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D DR55_3999 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D DR55_1410 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D DR55_438 ABC transporter family protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter
D DR55_4760 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DR55_5875 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DR55_2110 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DR55_5472 ABC transporter family protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D DR55_2777 ABC transporter family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DR55_4728 ABC transporter family protein K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D DR55_2877 cyclic peptide transporter family protein K06160 pvdE; putative pyoverdin transport system ATP-binding/permease protein
D DR55_1347 ABC transporter family protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein
D DR55_64 ccmA; heme ABC exporter, ATP-binding protein CcmA K15738 uup; ABC transport system ATP-binding/permease protein
D DR55_733 sbp; sulfate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein
D DR55_2941 sulfate ABC transporter, sulfate-binding family protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D DR55_2940 cysT; sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D DR55_2939 cysW; sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D DR55_2938 cysA; sulfate ABC transporter, ATP-binding family protein K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D DR55_3476 modA; molybdate ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D DR55_1793 bacterial extracellular solute-binding family protein K02020 modA; molybdate transport system substrate-binding protein
D DR55_3475 modB; molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D DR55_3474 ABC transporter family protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D DR55_3701 tauA; taurine ABC transporter, periplasmic binding protein K15551 tauA; taurine transport system substrate-binding protein
D DR55_3703 binding--dependent transport system inner membrane component family protein K15552 tauC; taurine transport system permease protein
D DR55_3702 ABC transporter family protein K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7]
D DR55_3350 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_4408 ABC transporter, substrate-binding , aliphatic sulfonates family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_1037 bacterial extracellular solute-binding s, 3 family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_2926 NMT1-like family protein K15553 ssuA; sulfonate transport system substrate-binding protein
D DR55_2961 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DR55_2923 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DR55_1035 binding--dependent transport system inner membrane component family protein K15554 ssuC; sulfonate transport system permease protein
D DR55_2960 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DR55_2924 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DR55_1036 ABC transporter family protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D DR55_4646 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D DR55_3325 bacterial extracellular solute-binding family protein K02012 afuA; iron(III) transport system substrate-binding protein
D DR55_4647 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D DR55_3326 binding--dependent transport system inner membrane component family protein K02011 afuB; iron(III) transport system permease protein
D DR55_4648 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DR55_3327 ABC transporter family protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D DR55_946 bacterial extracellular solute-binding family protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DR55_5291 bacterial extracellular solute-binding family protein K11069 potD; spermidine/putrescine transport system substrate-binding protein
D DR55_945 binding--dependent transport system inner membrane component family protein K11070 potC; spermidine/putrescine transport system permease protein
D DR55_5292 binding--dependent transport system inner membrane component family protein K11070 potC; spermidine/putrescine transport system permease protein
D DR55_944 binding--dependent transport system inner membrane component family protein K11071 potB; spermidine/putrescine transport system permease protein
D DR55_5293 binding--dependent transport system inner membrane component family protein K11071 potB; spermidine/putrescine transport system permease protein
D DR55_2670 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D DR55_4883 bacterial extracellular solute-binding family protein K11073 potF; putrescine transport system substrate-binding protein
D DR55_2673 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D DR55_4886 binding--dependent transport system inner membrane component family protein K11074 potI; putrescine transport system permease protein
D DR55_2672 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein
D DR55_4885 binding--dependent transport system inner membrane component family protein K11075 potH; putrescine transport system permease protein
D DR55_2671 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D DR55_4884 polyamine ABC transporter, ATP-binding family protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16]
D DR55_5108 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_3529 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_950 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_2764 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_3298 bacterial extracellular solute-binding family protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D DR55_5107 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_5110 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_3531 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_2766 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_3299 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_3301 binding--dependent transport system inner membrane component family protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D DR55_3530 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DR55_2765 binding--dependent transport system inner membrane component family protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D DR55_5109 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DR55_3528 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DR55_2767 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DR55_3302 ABC transporter family protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D DR55_5003 phnS; 2-aminoethylphosphonate ABC transporter, 2-aminoethylphosphonate binding protein K11081 phnS; 2-aminoethylphosphonate transport system substrate-binding protein
D DR55_5000 phnV; 2-aminoethylphosphonate ABC transport system, membrane component PhnV K11082 phnV; 2-aminoethylphosphonate transport system permease protein
D DR55_5001 phnU; 2-aminoethylphosphonate ABC transporter, permease protein K11083 phnU; 2-aminoethylphosphonate transport system permease protein
D DR55_5002 phnT; 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT K11084 phnT; 2-aminoethylphosphonate transport system ATP-binding protein
D DR55_3852 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DR55_4785 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DR55_4790 choX; choline ABC transporter, periplasmic binding family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DR55_4795 substrate binding domain of ABC-type glycine betaine transport system family protein K02002 proX; glycine betaine/proline transport system substrate-binding protein
D DR55_3850 choW; choline ABC transporter, permease protein K02001 proW; glycine betaine/proline transport system permease protein
D DR55_3849 proV; glycine betaine/L-proline transport ATP binding subunit K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9]
D DR55_2829 substrate binding domain of ABC-type glycine betaine transport system family protein K05845 opuC; osmoprotectant transport system substrate-binding protein
D DR55_2830 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D DR55_2833 binding--dependent transport system inner membrane component family protein K05846 opuBD; osmoprotectant transport system permease protein
D DR55_2831 ABC transporter family protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D DR55_94 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D DR55_380 binding--dependent transport system inner membrane component family protein K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D DR55_93 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D DR55_381 ABC transporter family protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D DR55_5648 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_287 ABC transporter family protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_4056 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_1912 ABC transporter family protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_1909 putative sugar-binding periplasmic protein K17315 gtsA; glucose/mannose transport system substrate-binding protein
D DR55_1910 binding--dependent transport system inner membrane component family protein K17316 gtsB; glucose/mannose transport system permease protein
D DR55_1911 binding--dependent transport system inner membrane component family protein K17317 gtsC; glucose/mannose transport system permease protein
D DR55_1548 periplasmic binding s and sugar binding domain of LacI family protein K10537 araF; L-arabinose transport system substrate-binding protein
D DR55_1550 branched-chain amino acid transport system / permease component family protein K10538 araH; L-arabinose transport system permease protein
D DR55_1549 ABC transporter family protein K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12]
D DR55_4300 ABC sugar (Ribose) transporter, periplasmic substrate-binding subunit K10439 rbsB; ribose transport system substrate-binding protein
D DR55_2892 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_5224 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_2936 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_4555 periplasmic binding s and sugar binding domain of LacI family protein K10439 rbsB; ribose transport system substrate-binding protein
D DR55_4302 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_2890 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_5223 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_4303 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_2934 branched-chain amino acid transport system / permease component family protein K10440 rbsC; ribose transport system permease protein
D DR55_4301 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DR55_5222 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DR55_2891 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DR55_2935 ABC transporter family protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7]
D DR55_5100 periplasmic binding s and sugar binding domain of LacI family protein K17205 xltC; putative xylitol transport system substrate-binding protein
D DR55_5101 branched-chain amino acid transport system / permease component family protein K17206 xltB; putative xylitol transport system permease protein
D DR55_5102 ABC transporter family protein K17207 xltA; putative xylitol transport system ATP-binding protein
D DR55_1336 bacterial extracellular solute-binding family protein K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D DR55_1337 binding--dependent transport system inner membrane component family protein K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D DR55_1338 binding--dependent transport system inner membrane component family protein K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D DR55_1339 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10]
D DR55_291 bacterial extracellular solute-binding family protein K10227 smoE; polyol transport system substrate-binding protein
D DR55_290 binding--dependent transport system inner membrane component family protein K10228 smoF; polyol transport system permease protein
D DR55_289 binding--dependent transport system inner membrane component family protein K10229 smoG; polyol transport system permease protein
D DR55_2660 hypothetical protein K02069 STAR2; UDP-glucose/iron transport system permease protein
D DR55_2661 ABC transporter family protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D DR55_1354 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DR55_681 mce related family protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D DR55_1353 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DR55_683 hypothetical protein K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D DR55_1352 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DR55_682 ABC transporter family protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D DR55_680 hypothetical protein K18480 linN; cholesterol transport system auxiliary component
D DR55_1356 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DR55_5409 putative signal peptide protein K07323 mlaC; phospholipid transport system substrate-binding protein
D DR55_1357 STAS domain protein K07122 mlaB; phospholipid transport system transporter-binding protein
D DR55_5649 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D DR55_4060 bacterial extracellular solute-binding family protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D DR55_5650 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D DR55_4059 binding--dependent transport system inner membrane component family protein K02025 ABC.MS.P; multiple sugar transport system permease protein
D DR55_5651 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D DR55_4058 binding--dependent transport system inner membrane component family protein K02026 ABC.MS.P1; multiple sugar transport system permease protein
D DR55_3102 periplasmic binding s and sugar binding domain of LacI family protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D DR55_4072 periplasmic binding s and sugar binding domain of LacI family protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein
D DR55_3103 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D DR55_4553 branched-chain amino acid transport system / permease component family protein K02057 ABC.SS.P; simple sugar transport system permease protein
D DR55_3104 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_4554 ABC transporter family protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-]
D DR55_3238 pstS; phosphate ABC transporter, phosphate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein
D DR55_3237 pstC; phosphate ABC transporter, permease protein PstC K02037 pstC; phosphate transport system permease protein
D DR55_3236 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein
D DR55_3235 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D DR55_1669 phnD; phosphonate ABC transporter, periplasmic phosphonate binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D DR55_1670 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein
D DR55_1668 phnC; phosphonate ABC transporter, ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D DR55_5087 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D DR55_1123 bacterial extracellular solute-binding s, 3 family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D DR55_2138 lysine-arginine-ornithine-binding periplasmic family protein K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein
D DR55_103 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein
D DR55_4350 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein
D DR55_2128 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10015 hisM; histidine transport system permease protein
D DR55_102 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D DR55_4351 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D DR55_2127 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10016 hisQ; histidine transport system permease protein
D DR55_104 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_4349 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_2129 ABC transporter family protein K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_101 lysine-arginine-ornithine-binding periplasmic family protein K10014 hisJ; histidine transport system substrate-binding protein
D DR55_5388 bacterial extracellular solute-binding s, 3 family protein K10036 glnH; glutamine transport system substrate-binding protein
D DR55_5389 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10037 glnP; glutamine transport system permease protein
D DR55_5390 ABC transporter family protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_1592 gltI; glutamate/aspartate periplasmic-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein
D DR55_1594 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10002 gltK; glutamate/aspartate transport system permease protein
D DR55_1593 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10003 gltJ; glutamate/aspartate transport system permease protein
D DR55_1595 ABC transporter family protein K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1]
D DR55_1905 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DR55_2972 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DR55_1904 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein
D DR55_2973 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K10009 tcyB; L-cystine transport system permease protein
D DR55_1903 ABC transporter family protein K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1]
D DR55_3404 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1089 branched-chain amino acid ABC transporter, periplasmic branched-chain amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1093 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1217 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1022 periplasmic binding domain protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1118 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_4776 braC; leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_2115 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_4537 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_2845 receptor ligand binding region family protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D DR55_1090 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_1094 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_1023 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_3111 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_4775 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_196 branched-chain amino acid transport system / permease component family protein K01997 livH; branched-chain amino acid transport system permease protein
D DR55_1095 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_3110 branched-chain amino acid transport system / permease component family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_4774 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_1024 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_195 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_1091 branched-chain amino acid transport system / permease component family protein K01998 livM; branched-chain amino acid transport system permease protein
D DR55_1087 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_1025 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_4773 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_194 ABC transporter family protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D DR55_4772 livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_3109 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_1026 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_193 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_1088 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_1096 ABC transporter family protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D DR55_614 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DR55_5091 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DR55_5034 NLPA lipofamily protein K02073 metQ; D-methionine transport system substrate-binding protein
D DR55_2009 lipo, YaeC family protein K02073 metQ; D-methionine transport system substrate-binding protein
D DR55_5031 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein
D DR55_2008 binding--dependent transport system inner membrane component family protein K02072 metI; D-methionine transport system permease protein
D DR55_5032 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D DR55_2007 ABC transporter family protein K02071 metN; D-methionine transport system ATP-binding protein
D DR55_1868 periplasmic binding domain protein K11959 urtA; urea transport system substrate-binding protein
D DR55_1867 urtB; urea ABC transporter, permease protein UrtB K11960 urtB; urea transport system permease protein
D DR55_1866 urtC; urea ABC transporter, permease protein UrtC K11961 urtC; urea transport system permease protein
D DR55_1865 urtD; urea ABC transporter, ATP-binding protein UrtD K11962 urtD; urea transport system ATP-binding protein
D DR55_1864 urtE; urea ABC transporter, ATP-binding protein UrtE K11963 urtE; urea transport system ATP-binding protein
D DR55_613 ABC transporter substrate binding family protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D DR55_612 branched-chain amino acid transport system / permease component family protein K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D DR55_611 ABC transporter family protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D DR55_2910 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DR55_3597 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DR55_3602 bacterial extracellular solute-binding s, 3 family protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D DR55_2908 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D DR55_2909 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02029 ABC.PA.P; polar amino acid transport system permease protein
D DR55_3600 amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D DR55_5586 bacterial extracellular solute-binding s, 5 Middle family protein K15580 oppA; oligopeptide transport system substrate-binding protein
D DR55_5587 binding--dependent transport system inner membrane component family protein K15581 oppB; oligopeptide transport system permease protein
D DR55_5588 binding--dependent transport system inner membrane component family protein K15582 oppC; oligopeptide transport system permease protein
D DR55_5589 hypothetical protein K15583 oppD; oligopeptide transport system ATP-binding protein
D DR55_5590 hypothetical protein K10823 oppF; oligopeptide transport system ATP-binding protein
D DR55_709 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DR55_840 bacterial extracellular solute-binding s, 5 Middle family protein K12368 dppA; dipeptide transport system substrate-binding protein
D DR55_839 binding--dependent transport system inner membrane component family protein K12369 dppB; dipeptide transport system permease protein
D DR55_838 binding--dependent transport system inner membrane component family protein K12370 dppC; dipeptide transport system permease protein
D DR55_837 hypothetical protein K12371 dppD; dipeptide transport system ATP-binding protein
D DR55_836 hypothetical protein K12372 dppF; dipeptide transport system ATP-binding protein
D DR55_3975 bacterial extracellular solute-binding s, 5 Middle family protein K13889 gsiB; glutathione transport system substrate-binding protein
D DR55_3976 binding--dependent transport system inner membrane component family protein K13890 gsiC; glutathione transport system permease protein
D DR55_3977 gsiD; glutathione transport system permease protein gsiD K13891 gsiD; glutathione transport system permease protein
D DR55_3974 nikE; nickel import ATP-binding protein NikE K13892 gsiA; glutathione transport system ATP-binding protein
D DR55_4370 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DR55_4381 bacterial extracellular solute-binding s, 5 Middle family protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D DR55_4382 binding--dependent transport system inner membrane component family protein K02033 ABC.PE.P; peptide/nickel transport system permease protein
D DR55_4383 binding--dependent transport system inner membrane component family protein K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D DR55_4384 ABC transporter family protein K02031 ddpD; peptide/nickel transport system ATP-binding protein
D DR55_4385 ABC transporter family protein K02032 ddpF; peptide/nickel transport system ATP-binding protein
D DR55_2376 bacterial extracellular solute-binding s, 5 Middle family protein K13893 yejA; microcin C transport system substrate-binding protein
D DR55_2377 binding--dependent transport system inner membrane component family protein K13894 yejB; microcin C transport system permease protein
D DR55_2378 binding--dependent transport system inner membrane component family protein K13895 yejE; microcin C transport system permease protein
D DR55_2379 nikE; nickel import ATP-binding protein NikE K13896 yejF; microcin C transport system ATP-binding protein
D DR55_2879 periplasmic binding family protein K23227 fhuD; ferric hydroxamate transport system substrate-binding protein
D DR55_2881 fecCD transport family protein K23228 fhuB; ferric hydroxamate transport system permease protein
D DR55_2882 putative siderophore transport system ATP-binding protein YusV K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16]
D DR55_5115 hmuT; hemin-binding periplasmic protein hmuT K25132 hmuT; heme transport system substrate-binding protein
D DR55_5117 fecCD transport family protein K25133 hmuU; heme transport system permease protein
D DR55_5118 hmuV; hemin import ATP-binding protein HmuV K10834 hmuV; heme transport system ATP-binding protein [EC:7.6.2.5]
D DR55_1797 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DR55_149 periplasmic binding family protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D DR55_1798 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D DR55_154 fecCD transport family protein K02015 ABC.FEV.P; iron complex transport system permease protein
D DR55_1796 ABC transporter family protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D DR55_296 periplasmic solute binding family protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein
D DR55_298 ABC 3 transport family protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein
D DR55_297 ABC transporter family protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein
D DR55_1713 ABC-2 type transporter family protein K09688 kpsM; capsular polysaccharide transport system permease protein
D DR55_1712 chain length determinant family protein K10107 kpsE; capsular polysaccharide transport system permease protein
D DR55_1714 ABC transporter family protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D DR55_1837 ABC-2 type transporter family protein K09690 wzm; homopolymeric O-antigen transport system permease protein
D DR55_1838 ABC transporter family protein K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D DR55_167 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D DR55_168 putative permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D DR55_543 ABC transporter family protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D DR55_2947 ABC-2 type transporter, NodJ family protein K09694 nodJ; lipooligosaccharide transport system permease protein
D DR55_2946 nodI; nodulation ABC transporter NodI K09695 nodI; lipooligosaccharide transport system ATP-binding protein
D DR55_2719 ABC-2 transporter family protein K19341 nosY; Cu-processing system permease protein
D DR55_2720 ABC transporter family protein K19340 nosF; Cu-processing system ATP-binding protein
D DR55_2244 liporeleasing system, transmembrane , LolC/E family protein K09808 lolC_E; lipoprotein-releasing system permease protein
D DR55_2245 lolD; liporeleasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D DR55_602 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DR55_1359 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DR55_5794 yhhJ; inner membrane transport permease yhhJ K01992 ABC-2.P; ABC-2 type transport system permease protein
D DR55_2725 ABC-2 type transporter family protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D DR55_601 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DR55_1358 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DR55_2724 ABC transporter family protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D DR55_3430 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DR55_5401 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DR55_5801 ftsX-like permease family protein K02004 ABC.CD.P; putative ABC transport system permease protein
D DR55_5400 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DR55_2527 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DR55_5802 ABC transporter family protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D DR55_2151 sufC; FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D DR55_762 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D DR55_2605 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D DR55_2045 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D DR55_3218 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D DR55_3717 sugar (and other) transporter family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D DR55_5304 sugar (and other) transporter family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D DR55_2927 MFS transporter, metabolite:H+ symporter family protein K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D DR55_3258 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D DR55_5084 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D DR55_4077 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D DR55_5020 sugar (and other) transporter family protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D DR55_2988 sugar (and other) transporter family protein K08178 JEN; MFS transporter, SHS family, lactate transporter
D DR55_3800 sugar (and other) transporter family protein K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D DR55_5005 major Facilitator Superfamily protein K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter
D DR55_275 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D DR55_3617 putative 4-hydroxybenzoate transporter transmembrane protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D DR55_5323 MFS transporter, aromatic acid:H+ symporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D DR55_1778 sugar (and other) transporter family protein K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter
D DR55_4559 sugar (and other) transporter family protein K05819 mhpT; MFS transporter, AAHS family, 3-hydroxyphenylpropionic acid transporter
D DR55_2847 major Facilitator Superfamily protein K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D DR55_1589 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_2212 narK; nitrite transporter family protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_2213 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_4047 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_4173 major Facilitator Superfamily protein K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter
D DR55_2404 major Facilitator Superfamily protein K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter
D DR55_896 major Facilitator Superfamily protein K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG
D DR55_4019 sugar (and other) transporter family protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D DR55_4849 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D DR55_1900 drug resistance transporter, Bcr/CflA subfamily protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D DR55_1782 sugar (and other) transporter family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D DR55_417 sugar (and other) transporter family protein K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D DR55_3023 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DR55_3133 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DR55_1051 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DR55_3929 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DR55_4814 drug resistance MFS transporter, drug:H+ antiporter-2 family protein K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D DR55_5021 major Facilitator Superfamily protein K08166 mmr; MFS transporter, DHA2 family, methylenomycin A resistance protein
D DR55_87 lacY proton/sugar symporter family protein K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein
D DR55_3088 major Facilitator Superfamily protein K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein
D DR55_871 sugar (and other) transporter family protein K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D DR55_3921 sugar (and other) transporter family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D DR55_3817 sugar (and other) transporter family protein K08369 ydjE; MFS transporter, putative metabolite:H+ symporter
D DR55_641 ptsP; phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D DR55_4177 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr
D DR55_642 phosphocarrier, HPr family protein K02784 ptsH; phosphocarrier protein HPr
D DR55_582 ptsP; phosphoenolpyruvate-protein phosphotransferase K23993 fruB; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.202]
D DR55_581 nagE; PTS system, N-acetylglucosamine-specific IIBC component K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193]
D DR55_643 PTS system fructose IIA component family protein K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D DR55_547 ptsN; PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D DR55_1187 MIP channel s family protein K06188 aqpZ; aquaporin Z
D DR55_407 MIP channel s family protein K02440 glpF; glycerol uptake facilitator
D DR55_4398 trkA-N domain protein K10716 kch; voltage-gated potassium channel
D DR55_730 putative inward rectifier potassium channel K08715 IRPC; inward rectifier potassium channel
D DR55_646 amt; ammonium transporter family protein K03320 amt; ammonium transporter, Amt family
D DR55_2137 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_4711 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_3371 putative gst-related protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_3902 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_5765 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_1626 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_5357 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_825 hypothetical protein K00799 GST; glutathione S-transferase [EC:2.5.1.18]
D DR55_1382 hypothetical protein K03599 sspA; stringent starvation protein A
D DR55_2624 inhibitor of apoptosis-promoting Bax1 family protein K19416 yccA; modulator of FtsH protease
D DR55_2479 mscL; large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D DR55_2713 mechanosensitive ion channel family protein K05802 mscK; potassium-dependent mechanosensitive channel
D DR55_1706 mechanosensitive ion channel family protein K03442 mscS; small conductance mechanosensitive channel
D DR55_1192 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DR55_1193 motB; motility protein B K02557 motB; chemotaxis protein MotB
D DR55_1576 motA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D DR55_4972 motA/TolQ/ExbB proton channel family protein K03561 exbB; biopolymer transport protein ExbB
D DR55_1577 biopolymer transport ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD
D DR55_4973 biopolymer transport ExbD/TolR family protein K03559 exbD; biopolymer transport protein ExbD
D DR55_1757 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ
D DR55_1756 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR
D DR55_2708 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D DR55_4064 corA-like Mg2+ transporter family protein K16074 zntB; zinc transporter
D DR55_1882 crcB-like family protein K06199 crcB; fluoride exporter
D DR55_4366 bestrophin, RFP-TM, chloride channel family protein K08994 yneE; ion channel-forming bestrophin family protein
D DR55_1507 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DR55_3466 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DR55_4789 gram-negative porin family protein K08720 ompU; outer membrane protein OmpU
D DR55_1404 ompA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DR55_1988 ompA family protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D DR55_3138 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D DR55_124 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D DR55_2900 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_2740 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_5273 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_5245 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_4372 autotransporter beta-domain protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D DR55_4087 TonB-dependent siderophore receptor family protein K16090 fiu; catecholate siderophore receptor
D DR55_155 tonB dependent receptor family protein K16092 btuB; vitamin B12 transporter
D DR55_4759 fptA; fe(3+)-pyochelin receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid
D DR55_5113 TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D DR55_3523 TonB-dependent copper receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DR55_1955 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DR55_5888 tonB dependent receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DR55_1795 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DR55_4304 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DR55_2873 TonB-dependent siderophore receptor family protein K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D DR55_4290 czcC; cobalt-zinc-cadmium resistance protein CzcC K15725 czcC; outer membrane protein, heavy metal efflux system
D DR55_3996 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_1409 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_5055 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18903 oprC; outer membrane protein, multidrug efflux system
D DR55_2903 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_4207 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_304 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_5797 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_3134 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18904 nodT; outer membrane protein, multidrug efflux system
D DR55_1738 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DR55_474 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DR55_1711 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DR55_5907 polysaccharide biosynthesis/export family protein K01991 wza; polysaccharide biosynthesis/export protein
D DR55_795 carbohydrate-selective porin, OprB family protein K07267 oprB; porin
D DR55_2432 yaeT; outer membrane assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D DR55_2631 yfgL; outer membrane assembly lipoprotein YfgL K17713 bamB; outer membrane protein assembly factor BamB
D DR55_3041 nlpB/DapX lipofamily protein K07287 bamC; outer membrane protein assembly factor BamC
D DR55_2264 nlpB/DapX lipofamily protein K07287 bamC; outer membrane protein assembly factor BamC
D DR55_2646 yfiO; outer membrane assembly lipoYfiO family protein K05807 bamD; outer membrane protein assembly factor BamD
D DR55_1574 smpA / OmlA family protein K06186 bamE; outer membrane protein assembly factor BamE
D DR55_138 surface antigen variable number repeat family protein K07278 tamA; translocation and assembly module TamA
D DR55_136 hypothetical protein K09800 tamB; translocation and assembly module TamB
D DR55_5278 coiled stalk of trimeric autotransporter adhesin family protein K21449 ata; trimeric autotransporter adhesin
D DR55_4544 coiled stalk of trimeric autotransporter adhesin family protein K21449 ata; trimeric autotransporter adhesin
D DR55_3184 coiled stalk of trimeric autotransporter adhesin family protein K21449 ata; trimeric autotransporter adhesin
D DR55_542 lptA; lipopolysaccharide transport periplasmic protein LptA K09774 lptA; lipopolysaccharide export system protein LptA
D DR55_541 lipopolysaccharide-assembly, LptC-related family protein K11719 lptC; lipopolysaccharide export system protein LptC
D DR55_435 organic solvent tolerance family protein K04744 lptD; LPS-assembly protein
D DR55_1579 lipopolysaccharide-assembly family protein K03643 lptE; LPS-assembly lipoprotein
D DR55_3693 cellulose synthase operon C family protein K20543 bcsC; cellulose synthase operon protein C
D DR55_3744 bipB; translocator protein BipB K13285 sipB; invasin B
D DR55_3747 type III effector protein IpaD/SipD/SspD K13287 sipD; invasin D
D DR55_423 transporter associated domain protein K06189 corC; hemolysin (HlyC) family protein
D DR55_1049 lrgA family protein K06518 cidA; holin-like protein
D DR55_5822 lysP; lysine-specific permease K11733 lysP; lysine-specific permease
D DR55_4532 amino acid permease family protein K11734 aroP; aromatic amino acid transport protein AroP
D DR55_1441 gabP; GABA permease K11735 gabP; GABA permease
D DR55_3323 amino acid permease family protein K16234 hutT; histidine transporter
D DR55_4215 arcD; arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D DR55_2835 arcD; arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease
D DR55_1132 eat; ethanolamine permease K16238 eat; ethanolamine permease
D DR55_3991 amino acid permease family protein K16263 yjeH; amino acid efflux transporter
D DR55_4292 czcA; cobalt-zinc-cadmium resistance protein CzcA K15726 czcA; heavy metal efflux system protein
D DR55_777 heavy metal efflux pump, CzcA family protein K07787 cusA; copper/silver efflux system protein
D DR55_5057 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18902 bpeF; multidrug efflux pump
D DR55_4208 acrB/AcrD/AcrF family protein K18307 mexI; multidrug efflux pump
D DR55_2683 acrB/AcrD/AcrF family protein K18303 mexK; multidrug efflux pump
D DR55_2904 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18095 mexY; multidrug efflux pump
D DR55_305 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D DR55_3336 MMPL family protein K07788 mdtB; multidrug efflux pump
D DR55_3337 acrB/AcrD/AcrF family protein K07789 mdtC; multidrug efflux pump
D DR55_2965 small Multidrug Resistance family protein K03297 emrE; small multidrug resistance pump
D DR55_3432 sugE; quaternary ammonium compound-resistance protein sugE K11741 sugE; quaternary ammonium compound-resistance protein SugE
D DR55_262 eamA-like transporter family protein K15268 eamA; O-acetylserine/cysteine efflux transporter
D DR55_5573 eamA-like transporter family protein K05786 rarD; chloramphenicol-sensitive protein RarD
D DR55_3257 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein
D DR55_1586 transporter, gluconate:H+ symporter family protein K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D DR55_5023 glcA; glycolate permease glcA K03303 lutP; lactate permease
D DR55_3971 transporter, betaine/carnitine/choline transporter family protein K02168 betT; choline/glycine/proline betaine transport protein
D DR55_4316 sodium/calcium exchanger family protein K07300 chaA; Ca2+:H+ antiporter
D DR55_4962 putative sodium:solute symporter, subfamily protein K14393 actP; cation/acetate symporter
D DR55_658 transporter, solute:sodium symporter family protein K14393 actP; cation/acetate symporter
D DR55_1570 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D DR55_657 dicarboxylate symporter family protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D DR55_5855 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D DR55_728 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter
D DR55_5523 sodium/hydrogen exchanger family protein K24160 NHA1; sodium/hydrogen antiporter
D DR55_538 trkA-N domain protein K03455 KEA1_2_3; K+:H+ antiporter
D DR55_4070 ketopantoate reductase PanE/ApbA family protein K26735 KEA4_5_6; K+:H+ antiporter
D DR55_2731 sodium/hydrogen exchanger family protein K26731 CHX; K+:H+ antiporter
D DR55_4149 sodium/hydrogen exchanger family protein K26731 CHX; K+:H+ antiporter
D DR55_4328 sodium/hydrogen exchanger family protein K26731 CHX; K+:H+ antiporter
D DR55_4586 permease for cytosine/purine, uracil, thiamine, allantoin family protein K10974 codB; cytosine permease
D DR55_807 putative pyrimidine permease RutG K09016 rutG; putative pyrimidine permease RutG
D DR55_303 putative purine permease ygfU K24206 uacT; uric acid transporter
D DR55_3453 pbuX; xanthine permease family protein K16345 xanP; xanthine permease XanP
D DR55_1969 putative adenine permease PurP K06901 pbuG; adenine/guanine/hypoxanthine permease
D DR55_4751 permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D DR55_38 benzoate transporter family protein K05782 benE; benzoate membrane transport protein
D DR55_2686 CBS domain protein K03281 clcA; chloride channel protein, CIC family
D DR55_4579 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D DR55_4320 CBS domain protein K03281 clcA; chloride channel protein, CIC family
D DR55_1928 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D DR55_5868 voltage gated chloride channel family protein K03281 clcA; chloride channel protein, CIC family
D DR55_54 chromate transporter family protein K07240 chrA; chromate transporter
D DR55_238 chr; chromate transporter, chromate ion transporter family protein K07240 chrA; chromate transporter
D DR55_5313 chr; chromate transporter, chromate ion transporter family protein K07240 chrA; chromate transporter
D DR55_804 chromate transporter family protein K07240 chrA; chromate transporter
D DR55_805 chromate transporter family protein K07240 chrA; chromate transporter
D DR55_2868 hoxN; high-affinity nickel transport protein K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein
D DR55_2985 sulfate transporter family protein K03321 TC.SULP; sulfate permease, SulP family
D DR55_3148 metal ion transporter, metal ion family protein K03322 mntH; manganese transport protein
D DR55_2669 metal ion transporter, metal ion family protein K03322 mntH; manganese transport protein
D DR55_4368 mntH; manganese transport protein mntH K03322 mntH; manganese transport protein
D DR55_3842 arsB; arsenical-resistance protein K03325 ACR3; arsenite transporter
D DR55_248 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D DR55_4190 membrane transport family protein K24180 mleP; malate permease and related proteins
D DR55_5051 membrane transport family protein K24180 mleP; malate permease and related proteins
D DR55_2641 kup; potassium uptake protein K03549 kup; KUP system potassium uptake protein
D DR55_5342 lysE type translocator family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D DR55_1888 lysE type translocator family protein K06895 lysE; L-lysine exporter family protein LysE/ArgO
D DR55_1170 lysE type translocator family protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D DR55_1239 lysE type translocator family protein K05834 rhtB; homoserine/homoserine lactone efflux protein
D DR55_847 lysE type translocator family protein K05835 rhtC; threonine efflux protein
D DR55_3247 lysE type translocator family protein K11250 leuE; leucine efflux protein
D DR55_744 azlC family protein K26605 azlC; branched chain amino acid efflux pump
D DR55_326 azlC family protein K26605 azlC; branched chain amino acid efflux pump
D DR55_325 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump
D DR55_743 branched-chain amino acid transport family protein K26606 azlD; branched chain amino acid efflux pump
D DR55_1366 marC integral membrane family protein K05595 marC; multiple antibiotic resistance protein
D DR55_4315 marC integral membrane family protein K05595 marC; multiple antibiotic resistance protein
D DR55_1487 ftsW; cell division protein FtsW K03588 ftsW; cell division protein FtsW
D DR55_1967 hypothetical protein K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family
D DR55_4980 iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter
D DR55_5729 iron permease FTR1 family protein K07243 FTR; high-affinity iron transporter
D DR55_4982 fe2+ transport family protein K07230 p19; periplasmic iron binding protein
D DR55_335 hypothetical protein K03832 tonB; periplasmic protein TonB
D DR55_4971 hypothetical protein K03832 tonB; periplasmic protein TonB
D DR55_1933 hypothetical protein K03832 tonB; periplasmic protein TonB
D DR55_1753 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein
D DR55_1755 tolA; protein TolA K03646 tolA; colicin import membrane protein
D DR55_1754 tolB; Tol-Pal system beta propeller repeat protein TolB K03641 tolB; TolB protein
D DR55_3269 mdcA; malonate decarboxylase, alpha subunit K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187]
D DR55_3268 mdcC; malonate decarboxylase acyl carrier protein K13931 mdcC; malonate decarboxylase delta subunit
D DR55_2211 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DR55_4168 nitrate reductase, alpha subunit K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-]
D DR55_2210 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DR55_4169 narH; nitrate reductase, beta subunit K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-]
D DR55_2208 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DR55_4171 narI; respiratory nitrate reductase, gamma subunit K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-]
D DR55_3022 efflux pump membrane family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D DR55_3132 efflux transporter, RND family, MFP subunit K03543 emrA; membrane fusion protein, multidrug efflux system
D DR55_3932 hlyD secretion family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D DR55_4810 hlyD secretion family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D DR55_4291 czcB; cobalt-zinc-cadmium resistance protein CzcB K15727 czcB; membrane fusion protein, heavy metal efflux system
D DR55_778 efflux transporter, RND family, MFP subunit K07798 cusB; membrane fusion protein, copper/silver efflux system
D DR55_2778 type I secretion membrane fusion , HlyD family protein K12542 lapC; membrane fusion protein, adhesin transport system
D DR55_4001 hlyD secretion family protein K13408 cvaA; membrane fusion protein
D DR55_1411 hlyD secretion family protein K13408 cvaA; membrane fusion protein
D DR55_5058 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D DR55_4209 efflux transporter, RND family, MFP subunit K18306 mexH; membrane fusion protein, multidrug efflux system
D DR55_2905 efflux transporter, RND family, MFP subunit K18094 mexX; membrane fusion protein, multidrug efflux system
D DR55_306 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system
D DR55_3335 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D DR55_4727 efflux transporter, RND family, MFP subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system
D DR55_1740 exopolysaccharide transport family protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DR55_5752 cobQ/CobB/MinD/ParA nucleotide binding domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DR55_5908 capsular exopolysaccharide family domain protein K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D DR55_4089 entericidin EcnA/B family protein K16348 ecnB; entericidin B
D DR55_3562 entericidin EcnA/B family protein K16348 ecnB; entericidin B
D DR55_3896 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D DR55_5142 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D DR55_4448 mgtC family protein K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
D DR55_2473 uraH; hydroxyisourate hydrolase K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
D DR55_4891 copper resistance D family protein K07245 pcoD; copper resistance protein D
D DR55_395 copper resistance D family protein K07245 pcoD; copper resistance protein D
D DR55_4892 copC domain protein K07156 copC; copper resistance protein C
D DR55_185 copC domain protein K07156 copC; copper resistance protein C
D DR55_4661 mltA-interacting MipA family protein K07274 mipA; MipA family protein
C 02044 Secretion system [BR:bpsh02044]
D DR55_3996 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_1409 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_2777 ABC transporter family protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB
D DR55_2778 type I secretion membrane fusion , HlyD family protein K12542 lapC; membrane fusion protein, adhesin transport system
D DR55_4001 hlyD secretion family protein K13408 cvaA; membrane fusion protein
D DR55_1411 hlyD secretion family protein K13408 cvaA; membrane fusion protein
D DR55_3999 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D DR55_1410 ABC transporter family protein K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
D DR55_1063 type IV pilus biogenesis family protein K02452 gspC; general secretion pathway protein C
D DR55_1066 gspD; type II secretion system protein D K02453 gspD; general secretion pathway protein D
D DR55_1065 gspE; type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DR55_3673 type II/IV secretion system family protein K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D DR55_1064 gspF; type II secretion system protein F K02455 gspF; general secretion pathway protein F
D DR55_1062 gspG; type II secretion system protein G K02456 gspG; general secretion pathway protein G
D DR55_1061 gspH; type II secretion system protein H K02457 gspH; general secretion pathway protein H
D DR55_1060 gspI; type II secretion system protein I K02458 gspI; general secretion pathway protein I
D DR55_1059 putative general secretion pathway protein J K02459 gspJ; general secretion pathway protein J
D DR55_1058 type II secretion system (T2SS), K family protein K02460 gspK; general secretion pathway protein K
D DR55_1057 gspL; type II secretion system protein L K02461 gspL; general secretion pathway protein L
D DR55_1056 type II secretion system (T2SS), M family protein K02462 gspM; general secretion pathway protein M
D DR55_1055 type II secretion system (T2SS), N family protein K02463 gspN; general secretion pathway protein N
D DR55_1504 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DR55_338 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D DR55_1506 type II/IV secretion system family protein K02652 pilB; type IV pilus assembly protein PilB
D DR55_1505 type II secretion system (T2SS), F family protein K02653 pilC; type IV pilus assembly protein PilC
D DR55_1766 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D DR55_1332 pilQ; type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D DR55_3668 type II/IV secretion system family protein K02669 pilT; twitching motility protein PilT
D DR55_1764 putative prepilin-type cleavage/methylation-like protein K02672 pilW; type IV pilus assembly protein PilW
D DR55_1762 type II transport GspH family protein K08084 fimT; type IV fimbrial biogenesis protein FimT
D DR55_3836 tash protein pest motif family protein K08086 fimV; pilus assembly protein FimV
D DR55_3841 schwannomin-interacting 1 family protein K08086 fimV; pilus assembly protein FimV
D DR55_2921 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DR55_3007 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DR55_5547 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DR55_2920 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DR55_3005 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DR55_5545 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DR55_2919 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D DR55_3004 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D DR55_5544 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D DR55_2917 cobQ/CobB/MinD/ParA nucleotide binding domain protein K02282 cpaE; pilus assembly protein CpaE
D DR55_3003 response regulator K02282 cpaE; pilus assembly protein CpaE
D DR55_5539 cobQ/CobB/MinD/ParA nucleotide binding domain protein K02282 cpaE; pilus assembly protein CpaE
D DR55_2916 ABC transporter family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DR55_3002 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DR55_5538 ABC transporter family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DR55_3001 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D DR55_5537 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D DR55_2915 type II secretion system (T2SS), F family protein K12510 tadB; tight adherence protein B
D DR55_2914 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D DR55_3000 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D DR55_5536 type II secretion system (T2SS), F family protein K12511 tadC; tight adherence protein C
D DR55_2999 tetratricopeptide repeat family protein K27079 tadD; tight adherence protein D
D DR55_2997 tad-like Flp pilus-assembly family protein K27080 tadG; tight adherence protein G
D DR55_3495 tad-like Flp pilus-assembly family protein K27080 tadG; tight adherence protein G
D DR55_2922 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_3008 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_5548 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_5549 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_1884 YGGT family protein K02221 yggT; YggT family protein
D DR55_2002 helix-hairpin-helix motif family protein K02237 comEA; competence protein ComEA
D DR55_2602 helix-hairpin-helix motif family protein K02237 comEA; competence protein ComEA
D DR55_2247 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D DR55_3678 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D DR55_3885 type III secretion outer membrane pore, YscC/HrcC family K03219 yscC; type III secretion protein C
D DR55_3656 putative transmembrane protein K03220 yscD; type III secretion protein D
D DR55_3868 putative transmembrane protein K03220 yscD; type III secretion protein D
D DR55_3728 eprI; type III secretion apparatus needle protein K03221 yscF; type III secretion protein F
D DR55_3646 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D DR55_3878 type III secretion apparatus lipoprotein, YscJ/HrcJ family K03222 yscJ; type III secretion protein J
D DR55_3644 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L
D DR55_3880 type III secretion apparatus protein, HrpE/YscL family K03223 yscL; type III secretion protein L
D DR55_3643 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D DR55_3881 type III secretion apparatus H+-transporting two-sector ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8]
D DR55_3738 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D DR55_3652 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D DR55_3872 epaO; type III secretion apparatus protein, YscQ/HrcQ family K03225 yscQ; type III secretion protein Q
D DR55_3653 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D DR55_3871 epaP; type III secretion apparatus protein, YscR/HrcR family K03226 yscR; type III secretion protein R
D DR55_3654 type III secretion , HrpO family protein K03227 yscS; type III secretion protein S
D DR55_3870 type III secretion , HrpO family protein K03227 yscS; type III secretion protein S
D DR55_3641 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D DR55_3883 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K03228 yscT; type III secretion protein T
D DR55_3649 type III secretion , YscU/HrpY family protein K03229 yscU; type III secretion protein U
D DR55_3875 flhB HrpN YscU SpaS family protein K03229 yscU; type III secretion protein U
D DR55_3733 invA; invasion protein invA K03230 yscV; type III secretion protein V
D DR55_3650 type III secretion , HrcV family protein K03230 yscV; type III secretion protein V
D DR55_3874 type III secretion , HrcV family protein K03230 yscV; type III secretion protein V
D DR55_3731 type III secretion outer membrane pore, YscC/HrcC family K22504 invG; type III secretion system outer membrane ring protein
D DR55_3726 type III secretion apparatus lipoprotein, YscJ/HrcJ family K22505 prgK; type III secretion system inner membrane ring protein
D DR55_3735 putative ATP synthase SpaL K22506 spaL; type III secretion system ATPase [EC:7.4.2.8]
D DR55_3739 epaP; type III secretion apparatus protein, YscR/HrcR family K22507 spaP; type III secretion system export apparatus protein
D DR55_3740 type III secretion , HrpO family protein K22508 spaQ; type III secretion system export apparatus protein
D DR55_3741 epaR; type III secretion apparatus protein SpaR/YscT/HrcT K22509 spaR; type III secretion system export apparatus protein
D DR55_3742 spaS; surface presentation of antigens protein spaS K22510 spaS; type III secretion system export apparatus switch protein
D DR55_3732 type III secretion regulator YopN/LcrE/InvE/MxiC K22511 invE; type III secretion system protein
D DR55_3876 type III secretion protein HrpB1/HrpK K18373 hrpB1; type III secretion protein HrpB1
D DR55_3648 type III secretion protein HrpB1/HrpK K18373 hrpB1; type III secretion protein HrpB1
D DR55_3663 bacterial type III secretion family protein K18373 hrpB1; type III secretion protein HrpB1
D DR55_3647 type III secretion protein HrpB2 K18374 hrpB2; type III secretion inner rod protein HrpB2
D DR55_3877 type III secretion protein HrpB2 K18374 hrpB2; type III secretion inner rod protein HrpB2
D DR55_3655 hypothetical protein K18379 hpaA; type III secretion regulatory protein HpaA
D DR55_3651 type III secretion protein HpaP K18381 hpaC; type III secretion control protein HpaP
D DR55_3734 invasion B family protein K22512 spaK; type III secretion system chaperone
D DR55_3729 eprH; type III secretion apparatus protein PrgH/EprH K22488 prgH; type III secretion system protein
D DR55_3727 type III secretion needle MxiH like family protein K22487 prgJ; type III secretion system protein
D DR55_1207 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DR55_1206 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DR55_854 flhB HrpN YscU SpaS family protein K04061 flhB2; flagellar biosynthesis protein
D DR55_859 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DR55_861 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D DR55_862 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DR55_1045 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DR55_1044 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D DR55_1043 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DR55_1042 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DR55_1041 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DR55_1449 DSBA-like thioredoxin domain protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D DR55_4372 autotransporter beta-domain protein K12685 ssp; subtilase-type serine protease [EC:3.4.21.-]
D DR55_3762 hypothetical protein K11891 impL; type VI secretion system protein ImpL
D DR55_5195 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_1406 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_5628 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_4820 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_5263 intracellular multiplication and macrophage-killing family protein K11891 impL; type VI secretion system protein ImpL
D DR55_3763 type IV/VI secretion system , DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D DR55_5194 type VI secretion system OmpA/MotB family protein K11892 impK; type VI secretion system protein ImpK
D DR55_1392 type IV/VI secretion system , DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D DR55_5627 type VI secretion system OmpA/MotB family protein K11892 impK; type VI secretion system protein ImpK
D DR55_4821 type IV/VI secretion system , DotU family domain protein K11892 impK; type VI secretion system protein ImpK
D DR55_5264 type VI secretion system OmpA/MotB family protein K11892 impK; type VI secretion system protein ImpK
D DR55_5271 hypothetical protein K11892 impK; type VI secretion system protein ImpK
D DR55_3764 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D DR55_5193 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D DR55_1393 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D DR55_5626 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D DR55_4822 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D DR55_5265 hypothetical protein K11893 impJ; type VI secretion system protein ImpJ
D DR55_4831 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D DR55_1401 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D DR55_5183 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D DR55_3772 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D DR55_5255 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D DR55_5637 hypothetical protein K11895 impH; type VI secretion system protein ImpH
D DR55_3174 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D DR55_4832 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D DR55_365 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D DR55_1400 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D DR55_5636 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D DR55_5184 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D DR55_3773 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D DR55_5254 hypothetical protein K11896 impG; type VI secretion system protein ImpG
D DR55_4833 25-like lysozyme family protein K11897 impF; type VI secretion system protein ImpF
D DR55_1399 25-like lysozyme family protein K11897 impF; type VI secretion system protein ImpF
D DR55_5635 25-like lysozyme family protein K11897 impF; type VI secretion system protein ImpF
D DR55_5185 25-like lysozyme family protein K11897 impF; type VI secretion system protein ImpF
D DR55_5253 25-like lysozyme family protein K11897 impF; type VI secretion system protein ImpF
D DR55_4835 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D DR55_5190 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D DR55_1397 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D DR55_5633 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D DR55_3776 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D DR55_5268 hypothetical protein K11900 impC; type VI secretion system protein ImpC
D DR55_5189 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D DR55_1396 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D DR55_5632 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D DR55_3777 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D DR55_5269 hypothetical protein K11901 impB; type VI secretion system protein ImpB
D DR55_4837 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D DR55_1403 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D DR55_5631 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D DR55_5182 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D DR55_5256 hypothetical protein K11902 impA; type VI secretion system protein ImpA
D DR55_4834 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_5191 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_1398 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_3775 type VI secretion system effector, Hcp1 family protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_5267 hypothetical protein K11903 hcp; type VI secretion system secreted protein Hcp
D DR55_4828 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_4829 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_4376 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5639 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5666 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5181 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_3770 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5261 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_3167 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_4079 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_5290 Rhs element Vgr family protein K11904 vgrG; type VI secretion system secreted protein VgrG
D DR55_3774 25-like lysozyme family protein K11905 K11905; type VI secretion system protein
D DR55_4823 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_5192 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_1394 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_5625 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_5266 type VI secretion lipofamily protein K11906 vasD; type VI secretion system protein VasD
D DR55_4830 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_1402 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_5638 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_5188 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_3771 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_5250 clpV; type VI secretion ATPase, ClpV1 family K11907 vasG; type VI secretion system protein VasG
D DR55_3780 hypothetical protein K11910 vasJ; type VI secretion system protein VasJ
D DR55_1405 hypothetical protein K11890 impM; type VI secretion system protein ImpM
D DR55_5629 hypothetical protein K11890 impM; type VI secretion system protein ImpM
D DR55_5186 impE family protein K11898 impE; type VI secretion system protein ImpE
D DR55_5252 impE family protein K11898 impE; type VI secretion system protein ImpE
D DR55_2898 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_2901 fimA; type-1 fimbrial protein, A chain K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_2738 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_2741 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_5272 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_5275 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_2739 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_3139 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_123 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_2899 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_3138 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D DR55_124 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D DR55_2900 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_2740 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_5273 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_5245 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_3137 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_3140 fimbrial family protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_122 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_121 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_3142 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_3141 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_1497 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D DR55_635 secB; protein-export chaperone SecB K03071 secB; preprotein translocase subunit SecB
D DR55_1646 secD; export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D DR55_1274 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D DR55_1645 secF; export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D DR55_3399 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D DR55_1308 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D DR55_1519 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D DR55_564 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D DR55_1647 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D DR55_976 yidC; membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D DR55_1374 tatA; twin arginine-targeting translocase, TatA/E family protein K03116 tatA; sec-independent protein translocase protein TatA
D DR55_1375 tatB; twin arginine-targeting protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB
D DR55_1376 tatC; twin arginine-targeting protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:bpsh02042]
D DR55_4128 RHS repeat-associated core domain protein K11021 tccC; insecticidal toxin complex protein TccC
D DR55_4130 RHS repeat-associated core domain protein K11021 tccC; insecticidal toxin complex protein TccC
D DR55_1507 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DR55_3466 transporter associated domain protein K03699 tlyC; magnesium and cobalt exporter, CNNM family
D DR55_4536 channel , hemolysin III family protein K11068 hlyIII; hemolysin III
D DR55_747 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_5297 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_4576 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2983 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_3968 phosphoesterase family protein K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_2118 phospholipase C, phosphocholine-specific K01114 plc; phospholipase C [EC:3.1.4.3]
D DR55_4509 collagenase family protein K01387 colA; microbial collagenase [EC:3.4.24.3]
D DR55_4684 collagenase family protein K01387 colA; microbial collagenase [EC:3.4.24.3]
C 02022 Two-component system [BR:bpsh02022]
D DR55_3232 phoR; phosphate regulon sensor kinase PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D DR55_3233 phoB; phosphate regulon transcriptional regulatory protein PhoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DR55_3666 hypothetical protein K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D DR55_97 HAMP domain protein K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DR55_2492 putative oxidative stress related two component system, sensor kinase K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3]
D DR55_98 hypothetical protein K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DR55_2493 ompR; transcriptional regulatory protein ompR K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR
D DR55_4294 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_5734 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_4618 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_4293 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D DR55_5735 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D DR55_3435 universal stress family protein K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D DR55_3434 kdpE; KDP operon transcriptional regulatory protein kdpE K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D DR55_1034 his Kinase A domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D DR55_4644 HAMP domain protein K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3]
D DR55_4645 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D DR55_1033 hypothetical protein K07774 tctD; two-component system, OmpR family, response regulator TctD
D DR55_4721 his Kinase A domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DR55_312 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DR55_3815 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DR55_4663 HAMP domain protein K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D DR55_4723 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D DR55_3814 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D DR55_4662 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D DR55_345 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D DR55_4707 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D DR55_4688 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D DR55_1078 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D DR55_3779 hypothetical protein K02483 K02483; two-component system, OmpR family, response regulator
D DR55_313 response regulator K02483 K02483; two-component system, OmpR family, response regulator
D DR55_2207 GAF domain protein K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3]
D DR55_2206 bacterial regulatory s, luxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DR55_5410 bacterial regulatory s, luxR family protein K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL
D DR55_3920 response regulator K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3]
D DR55_2749 hpt domain protein K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D DR55_5249 response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3]
D DR55_3135 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DR55_2748 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DR55_5241 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DR55_5247 bacterial regulatory s, luxR family protein K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB
D DR55_4165 response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D DR55_850 bacterial regulatory s, luxR family protein K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY
D DR55_5411 histidine kinase family protein K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D DR55_2203 sensory box protein K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D DR55_2204 ntrC; nitrogen regulation protein NR K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D DR55_918 HAMP domain protein K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D DR55_917 bacterial regulatory , Fis family protein K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D DR55_5303 his Kinase A domain protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D DR55_656 his Kinase A domain protein K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3]
D DR55_655 AAA domain family protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D DR55_5302 bacterial regulatory , Fis family protein K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
D DR55_4525 PAS fold family protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DR55_3625 his Kinase A domain protein K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D DR55_1195 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DR55_1194 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DR55_1201 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DR55_1200 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DR55_5865 cheW-like domain protein K13490 wspE; two-component system, chemotaxis family, sensor histidine kinase and response regulator WspE
D DR55_5866 cheB methylesterase family protein K13491 wspF; two-component system, chemotaxis family, response regulator WspF [EC:3.1.1.61]
D DR55_889 his Kinase A domain protein K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
D DR55_888 bacterial regulatory , Fis family protein K15012 regA; two-component system, response regulator RegA
D DR55_4042 NMT1-like family protein K22067 nasS; two-component system, oxyanion-binding sensor
D DR55_4043 response regulator K07183 nasT; two-component system, response regulator / RNA-binding antiterminator
C 02035 Bacterial motility proteins [BR:bpsh02035]
D DR55_1195 cheW-like domain protein K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D DR55_1196 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D DR55_2823 cheW-like domain protein K03408 cheW; purine-binding chemotaxis protein CheW
D DR55_4523 cheC-like family protein K03410 cheC; chemotaxis protein CheC
D DR55_5382 cheC-like family protein K03410 cheC; chemotaxis protein CheC
D DR55_1199 cheD chemotactic sensory transduction family protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D DR55_1198 cheR methyltransferase, all-alpha domain protein K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D DR55_1200 cheB methylesterase family protein K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D DR55_1194 response regulator K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DR55_1201 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D DR55_1202 cheZ; protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ
D DR55_4614 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_4890 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_3087 hypothetical protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_5792 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_5807 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_616 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_4074 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_1163 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_2824 methyl-accepting chemotaxis (MCP) signaling domain protein K03406 mcp; methyl-accepting chemotaxis protein
D DR55_2931 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_763 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_1197 hypothetical protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_5146 tsr; methyl-accepting chemotaxis protein I K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_4403 methyl-accepting chemotaxis (MCP) signaling domain protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor
D DR55_387 sensory box protein K03776 aer; aerotaxis receptor
D DR55_5080 sensory box protein K03776 aer; aerotaxis receptor
D DR55_861 flagellar assembly FliH family protein K02411 fliH; flagellar assembly protein FliH
D DR55_862 fliI; flagellar protein export ATPase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D DR55_863 fliJ; flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D DR55_1044 fliO; flagellar biosynthetic protein FliO K02418 fliO; flagellar protein FliO/FliZ
D DR55_1043 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D DR55_1042 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D DR55_1041 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D DR55_1207 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D DR55_1206 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D DR55_860 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D DR55_1046 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D DR55_1045 fliN; flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D DR55_859 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D DR55_812 flagellar P-ring family protein K02394 flgI; flagellar P-ring protein FlgI
D DR55_820 flgA; flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D DR55_813 flagellar L-ring family protein K02393 flgH; flagellar L-ring protein FlgH
D DR55_1047 flagellar basal body-associated FliL family protein K02415 fliL; flagellar protein FliL
D DR55_858 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D DR55_864 flagellar hook-length control FliK family protein K02414 fliK; flagellar hook-length control protein FliK
D DR55_819 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D DR55_818 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D DR55_817 hypothetical protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D DR55_815 flgF; flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D DR55_814 flgF; flagellar basal-body rod protein FlgF K02392 flgG; flagellar basal-body rod protein FlgG
D DR55_811 flgJ; flagellar rod assembly protein/muramidase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D DR55_816 flagellar hook-basal body family protein K02390 flgE; flagellar hook protein FlgE
D DR55_809 flgK; flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D DR55_808 flgL; flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D DR55_822 flgN family protein K02399 flgN; flagellar biosynthesis protein FlgN
D DR55_1182 hypothetical protein K02406 fliC; flagellin
D DR55_4475 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2
D DR55_1181 flagellar hook-associated family protein K02407 fliD; flagellar hook-associated protein 2
D DR55_857 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D DR55_856 flagellar FliT family protein K02423 fliT; flagellar protein FliT
D DR55_1180 flagellar FliT family protein K02423 fliT; flagellar protein FliT
D DR55_1750 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D DR55_1190 flagellar transcriptional activator family protein K02403 flhD; flagellar transcriptional activator FlhD
D DR55_1191 flhC; flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC
D DR55_1210 RNA polymerase sigma factor, FliA/WhiG family protein K02405 fliA; RNA polymerase sigma factor FliA
D DR55_1192 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA
D DR55_1193 motB; motility protein B K02557 motB; chemotaxis protein MotB
D DR55_1905 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DR55_2972 bacterial extracellular solute-binding s, 3 family protein K02424 tcyA; L-cystine transport system substrate-binding protein
D DR55_821 flgM; flagellar biosynthesis anti-sigma factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D DR55_1208 flhF; flagellar biosynthesis protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D DR55_1209 cobQ/CobB/MinD/ParA nucleotide binding domain protein K04562 flhG; flagellar biosynthesis protein FlhG
D DR55_3668 type II/IV secretion system family protein K02669 pilT; twitching motility protein PilT
D DR55_338 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D DR55_1506 type II/IV secretion system family protein K02652 pilB; type IV pilus assembly protein PilB
D DR55_1505 type II secretion system (T2SS), F family protein K02653 pilC; type IV pilus assembly protein PilC
D DR55_1504 type IV leader peptidase family protein K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D DR55_1332 pilQ; type IV pilus secretin PilQ family protein K02666 pilQ; type IV pilus assembly protein PilQ
D DR55_1764 putative prepilin-type cleavage/methylation-like protein K02672 pilW; type IV pilus assembly protein PilW
D DR55_1766 hypothetical protein K02655 pilE; type IV pilus assembly protein PilE
D DR55_2922 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_3008 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_5548 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_5549 flp/Fap pilin component family protein K02651 flp; pilus assembly protein Flp/PilA
D DR55_2921 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DR55_3007 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DR55_5547 type IV leader peptidase family protein K02278 cpaA; prepilin peptidase CpaA [EC:3.4.23.43]
D DR55_2920 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DR55_3005 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DR55_5545 cpaB; Flp pilus assembly protein CpaB K02279 cpaB; pilus assembly protein CpaB
D DR55_2919 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D DR55_3004 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D DR55_5544 bacterial type II and III secretion system family protein K02280 cpaC; pilus assembly protein CpaC
D DR55_2917 cobQ/CobB/MinD/ParA nucleotide binding domain protein K02282 cpaE; pilus assembly protein CpaE
D DR55_3003 response regulator K02282 cpaE; pilus assembly protein CpaE
D DR55_5539 cobQ/CobB/MinD/ParA nucleotide binding domain protein K02282 cpaE; pilus assembly protein CpaE
D DR55_2916 ABC transporter family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DR55_3002 type II/IV secretion system family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DR55_5538 ABC transporter family protein K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D DR55_2898 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_2901 fimA; type-1 fimbrial protein, A chain K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_2738 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_2741 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_5272 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_5275 fimbrial family protein K07345 fimA; major type 1 subunit fimbrin (pilin)
D DR55_2739 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_3139 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_123 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_2899 hypothetical protein K07346 fimC; fimbrial chaperone protein
D DR55_3138 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D DR55_124 outer membrane usher family protein K07347 fimD; outer membrane usher protein
D DR55_2900 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_2740 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_5273 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_5245 hypothetical protein K07347 fimD; outer membrane usher protein
D DR55_3137 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_3140 fimbrial family protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_122 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_121 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_3142 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
D DR55_3141 spore Coat Protein U domain protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:bpsh04812]
D DR55_906 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DR55_4719 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DR55_3745 type III secretion target, IpaC/SipC family protein K13286 sipC; invasin C
D DR55_1493 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DR55_1492 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D DR55_1924 minC; septum site-determining protein MinC K03610 minC; septum site-determining protein MinC
D DR55_1925 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D DR55_1926 minE; cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D DR55_4274 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DR55_1099 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DR55_143 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DR55_5374 cobQ/CobB/MinD/ParA nucleotide binding domain protein K03496 parA; chromosome partitioning protein
D DR55_1100 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D DR55_5373 ParB/RepB/Spo0J family partition domain protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:bpsh04147]
D DR55_46 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K04079 HSP90A; molecular chaperone HtpG
D DR55_2251 eno; phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D DR55_1564 gap; glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D DR55_324 phosphoglycerate kinase family protein K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D DR55_5237 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DR55_323 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D DR55_2334 cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD family protein K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D DR55_4803 membrane dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D DR55_4874 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_1822 groL; chaperonin GroL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D DR55_1692 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D DR55_2528 phosphoglucose isomerase family protein K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D DR55_5336 strictosidine synthase family protein K01053 gnl; gluconolactonase [EC:3.1.1.17]
D DR55_2455 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D DR55_1272 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DR55_1286 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D DR55_1373 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DR55_5851 HIT domain protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D DR55_762 sodium Bile acid symporter family protein K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7
D DR55_1476 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_2990 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_5685 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_256 AMP-binding enzyme family protein K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D DR55_714 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1010 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2541 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2650 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_2655 acetyl-CoA C-acetyltransferase family protein K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D DR55_1211 ahcY; adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D DR55_245 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D DR55_537 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D DR55_125 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2807 ATP-grasp domain protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2812 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2366 D-ala D-ala ligase family protein K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D DR55_2813 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DR55_788 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D DR55_1780 fahA; fumarylacetoacetase K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D DR55_1962 fructose-1-6-bisphosphatase family protein K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D DR55_3196 glgB; 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D DR55_406 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D DR55_2184 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_2202 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_4881 glutamine synthetase, catalytic domain protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D DR55_1318 delta-aminolevulinic acid dehydratase family protein K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D DR55_1252 hppD; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D DR55_1080 pcbd1; pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D DR55_724 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_725 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_3352 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DR55_929 putative d-3-phosphoglycerate dehydrogenase oxidoreductase protein K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D DR55_1621 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D DR55_2029 peptidase M48 family protein K06013 STE24; STE24 endopeptidase [EC:3.4.24.84]
D DR55_3015 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2222 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_5460 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D DR55_2011 electron transfer flavoFAD-binding domain protein K03522 fixB; electron transfer flavoprotein alpha subunit
D DR55_1591 glu/Leu/Phe/Val dehydrogenase, dimerization domain protein K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]
D DR55_1908 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D DR55_3400 tpiA; triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D DR55_638 gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:bpsh02048]
D DR55_2313 D12 class N6 adenine-specific DNA methyltransferase family protein K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D DR55_3571 DNA methylase family protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D DR55_4253 DNA methylase family protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D DR55_525 C-5 cytosine-specific DNA methylase family protein K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DR55_1029 DEAD/DEAH box helicase family protein K01156 res; type III restriction enzyme [EC:3.1.21.5]
D DR55_1030 DNA methylase family protein K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DR55_4953 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D DR55_3688 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DR55_3689 helix-turn-helix family protein K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
D DR55_5306 hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
D DR55_1934 transcriptional regulator, XRE family K13655 mqsA; HTH-type transcriptional regulator / antitoxin MqsA
D DR55_1493 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D DR55_906 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DR55_4719 cell shape determining , MreB/Mrl family protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DR55_62 parC; DNA topoisomerase IV, A subunit K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DR55_63 parE; DNA topoisomerase IV, B subunit K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DR55_2382 gltX; glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D DR55_3552 flavinator of succinate dehydrogenase family protein K09159 cptB; antitoxin CptB
D DR55_5608 beta-eliminating lyase family protein K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D DR55_2232 iscS; cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:bpsh01504]
D DR55_5732 penicillin binding transpeptidase domain protein K19209 blaOXA-42; beta-lactamase class D OXA-42 [EC:3.5.2.6]
D DR55_5095 acetyltransferase family protein K18816 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D DR55_4019 sugar (and other) transporter family protein K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein
D DR55_4388 bla; beta-lactamase Toho-1 K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D DR55_4294 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_5734 heavy metal sensor kinase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_4618 histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3]
D DR55_4293 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D DR55_5735 response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
D DR55_4380 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D DR55_306 mexA; multidrug resistance protein mexA K03585 acrA; membrane fusion protein, multidrug efflux system
D DR55_305 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18138 acrB; multidrug efflux pump
D DR55_2903 oprM; outer membrane protein oprM K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_4207 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_304 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_5797 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18139 oprM; outer membrane protein, multidrug efflux system
D DR55_2683 acrB/AcrD/AcrF family protein K18303 mexK; multidrug efflux pump
D DR55_2906 putative transcriptional regulator domain protein K18129 mexZ; TetR/AcrR family transcriptional regulator, mexXY operon repressor
D DR55_2905 efflux transporter, RND family, MFP subunit K18094 mexX; membrane fusion protein, multidrug efflux system
D DR55_2904 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18095 mexY; multidrug efflux pump
D DR55_4990 cueR; Cu(I)-responsive transcriptional regulator K19591 cueR; MerR family transcriptional regulator, copper efflux regulator
D DR55_3996 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_1409 outer membrane efflux family protein K12340 tolC; outer membrane protein
D DR55_5060 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D DR55_3285 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D DR55_363 bacterial regulatory helix-turn-helix , lysR family protein K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC
D DR55_5058 efflux transporter, RND family, MFP subunit K18901 bpeE; membrane fusion protein, multidrug efflux system
D DR55_5057 RND transporter, hydrophobe/amphiphile efflux-1 family protein K18902 bpeF; multidrug efflux pump
D DR55_5055 efflux transporter, outer membrane factor (OMF) lipo, NodT family protein K18903 oprC; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins [BR:bpsh00536]
D DR55_77 hypothetical protein K15125 fhaB; filamentous hemagglutinin
D DR55_3541 hypothetical protein K15125 fhaB; filamentous hemagglutinin
D DR55_5671 hypothetical protein K15125 fhaB; filamentous hemagglutinin
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:bpsh00537]
D DR55_724 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_725 alkaline phosphatase family protein K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D DR55_4679 trehalase family protein K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D DR55_4803 membrane dipeptidase family protein K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins [BR:bpsh03200]
D DR55_2312 bacteriophage Rz lysis family protein K14744 rzpD; prophage endopeptidase [EC:3.4.-.-]
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:bpsh03100]
D DR55_1231 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_2383 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_1265 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_3360 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_4994 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_1471 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D DR55_3211 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_1153 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_72 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_1944 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_1945 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D DR55_2051 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DR55_2052 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D DR55_2385 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DR55_2524 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DR55_2387 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D DR55_4330 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DR55_2100 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D DR55_556 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D DR55_2384 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DR55_2386 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D DR55_1878 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DR55_2098 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DR55_2099 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DR55_1270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D DR55_2956 tRNA-His K14226 tRNA-His; tRNA His
D DR55_1264 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DR55_3361 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DR55_1470 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DR55_4995 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D DR55_3398 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_4563 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_2981 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_2980 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_177 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_2498 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D DR55_1751 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DR55_932 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D DR55_348 tRNA-Met K14230 tRNA-Met; tRNA Met
D DR55_2214 tRNA-Met K14230 tRNA-Met; tRNA Met
D DR55_2967 tRNA-Met K14230 tRNA-Met; tRNA Met
D DR55_3510 tRNA-Met K14230 tRNA-Met; tRNA Met
D DR55_916 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D DR55_3044 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DR55_1508 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DR55_3223 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D DR55_4961 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DR55_1921 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DR55_1936 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DR55_2341 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D DR55_1384 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DR55_1271 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DR55_1961 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D DR55_1273 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D DR55_1269 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D DR55_2517 tRNA-Val K14237 tRNA-Val; tRNA Val
D DR55_2189 tRNA-Val K14237 tRNA-Val; tRNA Val
D DR55_3055 tRNA-Val K14237 tRNA-Val; tRNA Val
D DR55_5706 tRNA-Val K14237 tRNA-Val; tRNA Val
D DR55_1263 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_1469 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_4996 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_3362 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D DR55_1473 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_4992 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_3358 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_1267 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D DR55_1268 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_1474 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_4991 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D DR55_3357 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D DR55_4472 aldo/keto reductase family protein K05882 E1.1.1.91; aryl-alcohol dehydrogenase (NADP+) [EC:1.1.1.91]
D DR55_4783 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D DR55_3274 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein K17735 lcdH; carnitine 3-dehydrogenase [EC:1.1.1.108]
D DR55_5571 3-beta hydroxysteroid dehydrogenase/isomerase family protein K00091 E1.1.1.219; dihydroflavonol-4-reductase [EC:1.1.1.219]
D DR55_5206 short chain dehydrogenase family protein K16216 yueD; benzil reductase ((S)-benzoin forming) [EC:1.1.1.320]
D DR55_3855 3-beta hydroxysteroid dehydrogenase/isomerase family protein K22025 denD; D-erythronate 2-dehydrogenase [EC:1.1.1.410]
D DR55_3860 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411]
D DR55_874 aldo/keto reductase family protein K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D DR55_2889 zinc-binding dehydrogenase family protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D DR55_5098 zinc-binding dehydrogenase family protein K23271 eltD; erythritol/L-threitol dehydrogenase [EC:1.1.1.-]
D DR55_1162 berberine and berberine like family protein K26080 E1.1.3.29; N-acylhexosamine oxidase [EC:1.1.3.29]
D DR55_4357 membrane bound FAD containing D-sorbitol dehydrogenase family protein K23274 fdhS; fructose 5-dehydrogenase small subunit [EC:1.1.5.14]
D DR55_867 aldehyde dehydrogenase family protein K00154 E1.2.1.68; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]
D DR55_2762 aldehyde dehydrogenase family protein K23463 tgnC; (Z)-2-((N-methylformamido)methylene)-5-hydroxybutyrolactone dehydrogenase [EC:1.2.1.-]
D DR55_729 hypothetical protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D DR55_1250 hypothetical protein K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8]
D DR55_5837 flavin oxidoreductase / NADH oxidase family protein K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D DR55_4194 flavin oxidoreductase / NADH oxidase family protein K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34]
D DR55_4030 zinc-binding dehydrogenase family protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D DR55_2545 zinc-binding dehydrogenase family protein K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-]
D DR55_4670 [2Fe-2S] binding domain protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16]
D DR55_4671 molybdopterin-binding domain of aldehyde dehydrogenase family protein K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16]
D DR55_3071 FAD binding domain protein K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1]
D DR55_5435 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D DR55_5198 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D DR55_3440 zinc-binding dehydrogenase family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D DR55_3401 NAD(P)H quinone oxidoreductase, PIG3 family protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D DR55_1451 NADPH-dependent FMN reductase family protein K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D DR55_4861 ahpF; alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-]
D DR55_3538 cytochrome c family protein K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2]
D DR55_269 msrA; peptide-methionine (S)-S-oxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D DR55_2536 msrB; peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D DR55_1611 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D DR55_2843 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D DR55_1610 hypothetical protein K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-]
D DR55_1323 oxidoreductase molybdopterin binding domain protein K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D DR55_4577 cytochrome c family protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D DR55_3129 cytochrome c family protein K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D DR55_5513 manganese containing catalase family protein K07217 ydbD; manganese catalase [EC:1.11.1.6]
D DR55_4907 cpo; non-heme chloroperoxidase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10]
D DR55_2583 redoxin family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DR55_3339 redoxin family protein K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DR55_1529 ahpC/TSA family protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DR55_1770 hypothetical protein K24158 prx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D DR55_4860 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D DR55_3480 peroxiredoxin, Ohr subfamily protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D DR55_2490 alkylhydroperoxidase AhpD family core domain protein K04756 ahpD; lipoyl-dependent peroxiredoxin subunit D [EC:1.11.1.28]
D DR55_2491 redoxin family protein K24126 ahpC; lipoyl-dependent peroxiredoxin subunit C [EC:1.11.1.28]
D DR55_5876 Dyp-type peroxidase family protein K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-]
D DR55_4921 cupin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DR55_100 cupin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DR55_4975 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DR55_2103 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D DR55_4686 putative alkylsulfatase K22303 atsK; alkyl sulfatase [EC:1.14.11.77]
D DR55_4085 2OG-Fe(II) oxygenase superfamily protein K07336 K07336; PKHD-type hydroxylase [EC:1.14.11.-]
D DR55_1678 hmp; flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D DR55_2874 FAD-NAD(P)-binding family protein K10531 pvdA; L-ornithine N5-monooxygenase [EC:1.14.13.195 1.14.13.196]
D DR55_4664 FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D DR55_5033 FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family protein K20938 ladA; long-chain alkane monooxygenase [EC:1.14.14.28]
D DR55_2761 luciferase-like monooxygenase family protein K23464 tgnB; flavin-dependent trigonelline monooxygenase, oxygenase component [EC:1.14.14.-]
D DR55_4894 multicopper oxidase family protein K22348 moxA; manganese oxidase [EC:1.16.3.3]
D DR55_2372 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D DR55_848 fpr; ferredoxin--NADP reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D DR55_5376 arsC; arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D DR55_3843 low molecular weight phosphotyrosine phosphatase family protein K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D DR55_4180 NADH-Ubiquinone/plastoquinone (complex I), various chains family protein K12137 hyfB; hydrogenase-4 component B [EC:1.-.-.-]
D DR55_4182 putative membrane protein K12140 hyfE; hydrogenase-4 component E [EC:1.-.-.-]
D DR55_4183 NADH-Ubiquinone/plastoquinone (complex I), various chains family protein K12141 hyfF; hydrogenase-4 component F [EC:1.-.-.-]
D DR55_1871 met-10+ like-family protein K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DR55_2618 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D DR55_267 methyltransferase domain protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D DR55_5682 methyltransferase small domain protein K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D DR55_2815 methyltransferase small domain protein K16215 mrsA; 2-ketoarginine methyltransferase [EC:2.1.1.243]
D DR55_2803 carbamoyltransferase family protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D DR55_5477 carbamoyltransferase family protein K00612 nodU; carbamoyltransferase [EC:2.1.3.-]
D DR55_4420 arylamine N-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118]
D DR55_424 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D DR55_2532 acetyltransferase family protein K03824 yhbS; putative acetyltransferase [EC:2.3.1.-]
D DR55_2969 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D DR55_2970 hypothetical protein K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D DR55_5487 glycosyl transferases group 1 family protein K15521 mshA; D-inositol-3-phosphate glycosyltransferase [EC:2.4.1.250]
D DR55_3264 mdcB; triphosphoribosyl-dephospho-CoA synthase MdcB K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52]
D DR55_5385 hpnD; squalene synthase HpnD K21678 hpnD; presqualene diphosphate synthase [EC:2.5.1.103]
D DR55_160 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D DR55_2723 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DR55_3810 apbE family protein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D DR55_3859 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217]
D DR55_2440 kinase/pyrophosphorylase family protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D DR55_1684 glutamate-ammonia ligase adenylyltransferase family protein K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D DR55_514 reverse transcriptase family protein K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D DR55_3265 mdcG; malonate decarboxylase holo-[acyl-carrier-protein] synthase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66]
D DR55_2537 hypothetical protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D DR55_5630 tyrosine kinase family protein K08282 E2.7.11.1; non-specific serine/threonine protein kinase [EC:2.7.11.1]
D DR55_712 isocitrate dehydrogenase kinase/phosphatase family protein K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-]
D DR55_548 hprK; HPr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D DR55_2616 coA-transferase III family protein K07749 frc; formyl-CoA transferase [EC:2.8.3.16]
D DR55_4632 alpha/beta hydrolase fold family protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D DR55_633 macro domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D DR55_4782 hypothetical protein K27492 cdhB; betainyl-CoA thioesterase [EC:3.1.2.33]
D DR55_1758 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DR55_3069 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DR55_3112 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D DR55_2258 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D DR55_3222 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D DR55_4791 betC; choline-sulfatase K01133 betC; choline-sulfatase [EC:3.1.6.6]
D DR55_2554 hydrolase, TatD family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DR55_2246 tatD related DNase family protein K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D DR55_3692 glycosyl hydrolases 8 family protein K20542 bcsZ; endoglucanase [EC:3.2.1.4]
D DR55_2311 phage lysozyme family protein K01185 E3.2.1.17; lysozyme [EC:3.2.1.17]
D DR55_5898 N-acetylmuramoyl-L-alanine amidase family protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DR55_3784 N-acetylmuramoyl-L-alanine amidase family protein K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D DR55_463 amidohydrolase family protein K06015 E3.5.1.81; N-acyl-D-amino-acid deacylase [EC:3.5.1.81]
D DR55_2420 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DR55_924 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D DR55_1682 carbon-nitrogen hydrolase family protein K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128]
D DR55_2759 phospholipase/Carboxylesterase family protein K23465 tgnD; (E)-2-((N-methylformamido)methylene)succinate hydrolase [EC:3.5.1.-]
D DR55_2474 amidohydrolase family protein K18456 E3.5.4.32; 8-oxoguanine deaminase [EC:3.5.4.32]
D DR55_5533 endoribonuclease L-PSP family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D DR55_1453 CYTH domain protein K18446 ygiF; triphosphatase [EC:3.6.1.25]
D DR55_2070 maf; septum formation protein Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-]
D DR55_749 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D DR55_5431 serine hydrolase family protein K07002 RBBP9; serine hydrolase [EC:3.-.-.-]
D DR55_3267 mdcD; malonate decarboxylase, beta subunit K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87]
D DR55_3266 mdcE; malonate decarboxylase, gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87]
D DR55_3858 hypothetical protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104]
D DR55_2529 hydroxyethylthiazole kinase family protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D DR55_1887 pyridoxal-phosphate dependent enzyme family protein K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16]
D DR55_4546 hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D DR55_3856 xylose isomerase-like TIM barrel family protein K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35]
D DR55_1119 AMP-binding enzyme family protein K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D DR55_4560 AMP-binding enzyme family protein K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34]
D DR55_494 bacteriocin biosynthesis cyclodehydratase domain protein K24411 patD; oxazoline/thiazoline synthase [EC:6.2.2.2 6.2.2.3]
D DR55_1537 mpl; L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D DR55_30 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D DR55_784 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
D DR55_4227 HAD ATPase, P-type, IC family protein K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D DR55_1128 cadA; cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D DR55_4361 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14]
C 99981 Carbohydrate metabolism
D DR55_5026 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D DR55_2227 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D DR55_5025 iron-sulfur cluster-binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D DR55_2228 4Fe-4S binding domain protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D DR55_2055 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
D DR55_5024 hypothetical protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D DR55_441 formate dehydrogenase family accessory protein FdhD K02379 fdhD; FdhD protein
D DR55_2237 fdx; ferredoxin, 2Fe-2S type, ISC system K04755 fdx; ferredoxin, 2Fe-2S
D DR55_2053 4Fe-4S binding domain protein K05524 fdxA; ferredoxin
D DR55_2371 fdxA; ferredoxin-1 K05524 fdxA; ferredoxin
D DR55_2148 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D DR55_2233 iscU; FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins
D DR55_4677 cytochrome c oxidase subunit III family protein K02164 norE; nitric oxide reductase NorE protein
D DR55_2010 electron transfer flavodomain protein K03521 fixA; electron transfer flavoprotein beta subunit
D DR55_2476 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
D DR55_1120 hypothetical protein K09456 aidB; putative acyl-CoA dehydrogenase
D DR55_866 hypothetical protein K09456 aidB; putative acyl-CoA dehydrogenase
D DR55_4329 fabD; malonyl CoA-acyl carrier protein transacylase K15355 K15355; malonyl CoA-acyl carrier protein transacylase
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D DR55_959 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K08234 yaeR; glyoxylase I family protein
D DR55_1672 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D DR55_1997 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D DR55_1998 tetratricopeptide repeat family protein K19804 lapB; lipopolysaccharide assembly protein B
D DR55_797 membrane family protein K07027 K07027; glycosyltransferase 2 family protein
D DR55_3691 bacterial cellulose synthase subunit K20541 bcsB; cellulose synthase operon protein B
C 99987 Cofactor metabolism
D DR55_2867 cobW; cobalamin biosynthesis protein CobW K02234 cobW; cobalamin biosynthesis protein CobW
D DR55_115 tetratricopeptide repeat family protein K02498 hemY; HemY protein
D DR55_453 ubiB; 2-polyprenylphenol 6-hydroxylase K03688 ubiB; ubiquinone biosynthesis protein
D DR55_454 SCP-2 sterol transfer family protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ
D DR55_648 membrane fusogenic activity family protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK
D DR55_2161 SCP-2 sterol transfer family protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT
D DR55_2864 von Willebrand factor type A domain protein K13580 K13580; magnesium chelatase subunit ChlD-like protein
C 99988 Secondary metabolism
D DR55_5379 NADPH-dependent FMN reductase family protein K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D DR55_144 doxX family protein K15977 K15977; putative oxidoreductase
D DR55_4354 yphA; inner membrane protein yphA K15977 K15977; putative oxidoreductase
D DR55_2798 TQO small subunit DoxD family protein K15977 K15977; putative oxidoreductase
D DR55_5022 yphA; inner membrane protein yphA K15977 K15977; putative oxidoreductase
D DR55_2859 phospholipase/Carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D DR55_1950 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein
D DR55_3912 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein
D DR55_1424 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein
D DR55_220 'Cold-shock' DNA-binding domain protein K03704 cspA; cold shock protein
D DR55_647 nitrogen regulatory P-II family protein K04752 glnK; nitrogen regulatory protein P-II 2
D DR55_2642 S1 RNA binding domain protein K06959 tex; protein Tex
C 99974 Translation
D DR55_5795 ccmA; heme ABC exporter, ATP-binding protein CcmA K13926 rbbA; ribosome-dependent ATPase
D DR55_5820 metallo-beta-lactamase superfamily protein K07576 K07576; metallo-beta-lactamase family protein
C 99975 Protein processing
D DR55_219 ATP-dependent Clp protease adaptor ClpS family protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D DR55_2513 tig; trigger factor K03545 tig; trigger factor
D DR55_1324 ferric reductase like transmembrane component family protein K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D DR55_3608 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein
D DR55_1859 hypothetical protein K03187 ureE; urease accessory protein
D DR55_1858 ureF family protein K03188 ureF; urease accessory protein
D DR55_1857 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein
D DR55_1863 ureD urease accessory family protein K03190 ureD; urease accessory protein
D DR55_2448 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D DR55_649 sigma-54 interaction domain protein K07391 comM; magnesium chelatase family protein
D DR55_4371 2OG-Fe(II) oxygenase superfamily protein K07394 K07394; SM-20-related protein
D DR55_4473 putative dSBA oxidoreductase K07396 K07396; putative protein-disulfide isomerase
D DR55_1605 osmC-like family protein K07397 yhfA; putative redox protein
D DR55_5878 osmC-like family protein K07397 yhfA; putative redox protein
D DR55_1321 resB-like family protein K07399 resB; cytochrome c biogenesis protein
D DR55_1971 xdhC; xanthine dehydrogenase accessory protein XdhC K07402 xdhC; xanthine dehydrogenase accessory factor
D DR55_852 xdhC and CoxI family protein K07402 xdhC; xanthine dehydrogenase accessory factor
D DR55_4737 hypothetical protein K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D DR55_200 DNA repair RadC family protein K03630 radC; DNA repair protein RadC
D DR55_2058 rmuC family protein K09760 rmuC; DNA recombination protein RmuC
D DR55_1227 hypothetical protein K07460 yraN; putative endonuclease
D DR55_110 hypothetical protein K07461 K07461; putative endonuclease
D DR55_925 dprA; DNA protecting protein DprA K04096 smf; DNA processing protein
D DR55_1918 sigma-54 interaction domain protein K07478 ycaJ; putative ATPase
D DR55_973 hypothetical protein K06919 K06919; putative DNA primase/helicase
D DR55_2283 virulence-associated E family protein K06919 K06919; putative DNA primase/helicase
D DR55_2621 DNA polymerase family B, exonuclease domain protein K07501 K07501; 3'-5' exonuclease
D DR55_516 transposase family protein K07483 K07483; transposase
D DR55_5615 transposase family protein K07483 K07483; transposase
D DR55_665 transposase family protein K07483 K07483; transposase
D DR55_938 transposase family protein K07483 K07483; transposase
D DR55_2116 transposase family protein K07483 K07483; transposase
D DR55_4083 transposase family protein K07483 K07483; transposase
D DR55_5655 putative transposase K07484 K07484; transposase
D DR55_4135 putative transposase K07484 K07484; transposase
D DR55_2026 transposase family protein K07485 K07485; transposase
D DR55_5662 transposase family protein K07485 K07485; transposase
D DR55_1342 transposase IS200 like family protein K07491 rayT; REP-associated tyrosine transposase
D DR55_3033 hypothetical protein K07492 K07492; putative transposase
D DR55_5716 transposase, Mutator family protein K07493 K07493; putative transposase
D DR55_3152 transposase, Mutator family protein K07493 K07493; putative transposase
D DR55_4084 transposase, Mutator family protein K07493 K07493; putative transposase
D DR55_1388 integrase core domain protein K07497 K07497; putative transposase
D DR55_351 integrase core domain protein K07497 K07497; putative transposase
D DR55_4124 transposase family protein K07497 K07497; putative transposase
D DR55_4123 integrase core domain protein K07497 K07497; putative transposase
D DR55_4118 transposase family protein K07497 K07497; putative transposase
D DR55_4119 integrase core domain protein K07497 K07497; putative transposase
D DR55_4951 transposase family protein K07497 K07497; putative transposase
D DR55_352 putative transposase K07497 K07497; putative transposase
D DR55_1387 transposase family protein K07497 K07497; putative transposase
D DR55_3158 integrase core domain protein K07497 K07497; putative transposase
D DR55_5723 transposase family protein K07497 K07497; putative transposase
D DR55_515 integrase core domain protein K07497 K07497; putative transposase
D DR55_5616 integrase core domain protein K07497 K07497; putative transposase
D DR55_666 integrase core domain protein K07497 K07497; putative transposase
D DR55_4116 integrase core domain protein K07497 K07497; putative transposase
D DR55_4133 integrase core domain protein K07497 K07497; putative transposase
D DR55_4947 integrase core domain protein K07497 K07497; putative transposase
D DR55_4952 integrase core domain protein K07497 K07497; putative transposase
D DR55_937 integrase core domain protein K07497 K07497; putative transposase
D DR55_2117 integrase core domain protein K07497 K07497; putative transposase
D DR55_5673 transposase IS66 family protein K07498 K07498; putative transposase
C 99979 Viral proteins
C 99998 Others
D DR55_2481 pspA/IM30 family protein K03969 pspA; phage shock protein A
D DR55_2614 DNA-binding protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D DR55_1947 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family
D DR55_2820 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family
D DR55_4588 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family
D DR55_4598 gram-negative porin family protein K03285 TC.GBP; general bacterial porin, GBP family
D DR55_4491 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family
D DR55_1232 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family
D DR55_217 amino acid permease family protein K03293 TC.AAT; amino acid transporter, AAT family
D DR55_851 amino acid permease family protein K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D DR55_2345 MMPL family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D DR55_5584 dtpA; dipeptide and tripeptide permease A K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D DR55_2580 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D DR55_3709 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D DR55_41 putative membrane protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D DR55_5054 dicarboxylate symporter family protein K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family
D DR55_1345 agcS; amino acid carrier family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D DR55_3513 permease for cytosine/purine, uracil, thiamine, allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D DR55_2465 permease for cytosine/purine, uracil, thiamine, allantoin family protein K03457 TC.NCS1; nucleobase:cation symporter-1, NCS1 family
D DR55_5768 nucleoside transporter, NupC family protein K03317 TC.CNT; concentrative nucleoside transporter, CNT family
D DR55_1852 polysaccharide biosynthesis family protein K03328 TC.PST; polysaccharide transporter, PST family
D DR55_491 polysaccharide biosynthesis family protein K03328 TC.PST; polysaccharide transporter, PST family
C 99978 Cell growth
D DR55_2535 ispZ; intracellular septation protein A K06190 ispZ; intracellular septation protein
D DR55_2928 spoVR like family protein K06415 spoVR; stage V sporulation protein R
C 99993 Cell motility
D DR55_4699 hypothetical protein K07343 tfoX; DNA transformation protein and related proteins
D DR55_5274 hypothetical protein K15540 ecpD; chaperone protein EcpD
C 99995 Signaling proteins
D DR55_4235 proQ/FINO family protein K03607 proQ; ProP effector
D DR55_5562 carbon starvation CstA family protein K06200 cstA; carbon starvation protein
D DR55_3019 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D DR55_4318 CBS domain protein K07168 K07168; CBS domain-containing membrane protein
D DR55_5623 FHA domain protein K07169 K07169; FHA domain-containing protein
D DR55_420 phoH-like family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D DR55_2582 phoH-like family protein K07175 phoH2; PhoH-like ATPase
D DR55_2930 hypothetical protein K07180 prkA; serine protein kinase
D DR55_253 hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D DR55_1917 lolA; outer membrane lipocarrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D DR55_554 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB
D DR55_1355 vacJ like lipofamily protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D DR55_5394 vacJ like lipofamily protein K04754 mlaA; phospholipid-binding lipoprotein MlaA
D DR55_1527 glycine zipper 2TM domain protein K06077 slyB; outer membrane lipoprotein SlyB
D DR55_2433 outer membrane family protein K06142 hlpA; outer membrane protein
D DR55_3519 lysM domain protein K06194 nlpD; lipoprotein NlpD
D DR55_4389 lysM domain protein K06194 nlpD; lipoprotein NlpD
D DR55_2619 lysM domain protein K06194 nlpD; lipoprotein NlpD
D DR55_3214 lysM domain protein K12943 ygeR; lipoprotein YgeR
D DR55_1726 capsule polysaccharide biosynthesis family protein K07265 kpsS; capsular polysaccharide export protein
D DR55_1742 capsule polysaccharide biosynthesis family protein K07265 kpsS; capsular polysaccharide export protein
D DR55_1709 capsule polysaccharide biosynthesis family protein K07266 kpsC; capsular polysaccharide export protein
D DR55_1242 ompW family protein K07275 ompW; outer membrane protein
D DR55_2667 ompW family protein K07275 ompW; outer membrane protein
D DR55_1341 ompW family protein K07275 ompW; outer membrane protein
D DR55_1815 ompW family protein K07275 ompW; outer membrane protein
D DR55_2662 asmA family protein K07290 yhjG; AsmA family protein
D DR55_5796 efflux transporter, RND family, MFP subunit K01993 ABC-2.TX; HlyD family secretion protein
D DR55_5803 hlyD secretion family protein K02005 ABC.CD.TX; HlyD family secretion protein
D DR55_3123 glycine zipper 2TM domain protein K04062 osmB; osmotically inducible lipoprotein OsmB
D DR55_3313 glycine zipper 2TM domain protein K04062 osmB; osmotically inducible lipoprotein OsmB
D DR55_4622 smpA / OmlA family protein K04064 osmE; osmotically inducible lipoprotein OsmE
D DR55_2627 helix-turn-helix domain protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D DR55_3234 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein
D DR55_4970 BFD-like [2Fe-2S] binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D DR55_1316 cutA1 divalent ion tolerance family protein K03926 cutA; periplasmic divalent cation tolerance protein
D DR55_722 cutC family protein K06201 cutC; copper homeostasis protein
D DR55_1665 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein
D DR55_1460 apaG; protein ApaG K06195 apaG; ApaG protein
D DR55_1327 cyaY; iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY
D DR55_2721 nosD; nitrous oxide reductase maturation NosD family protein K07218 nosD; nitrous oxidase accessory protein
D DR55_5114 hemin-degrading HemS.ChuX domain protein K07225 hmuS; putative hemin transport protein
D DR55_2153 nnrS family protein K07234 K07234; uncharacterized protein involved in response to NO
D DR55_2718 nosL family protein K19342 nosL; copper chaperone NosL
B
B 09194 Poorly characterized
C 99996 General function prediction only
D DR55_3576 colicin V production family protein K03558 cvpA; membrane protein required for colicin V production
D DR55_1638 mce related family protein K06192 pqiB; paraquat-inducible protein B
D DR55_2104 acetyltransferase family protein K02348 elaA; ElaA protein
D DR55_5488 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein
D DR55_1802 BON domain protein K04065 osmY; hyperosmotically inducible periplasmic protein
D DR55_984 DEAD/DEAH box helicase family protein K06877 K06877; DEAD/DEAH box helicase domain-containing protein
D DR55_2598 bacterial-like globin family protein K06886 glbN; hemoglobin
D DR55_3429 bacterial-like globin family protein K06886 glbN; hemoglobin
D DR55_4720 surface antigen variable number repeat family protein K07001 K07001; NTE family protein
D DR55_691 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D DR55_2381 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D DR55_5355 patatin-like phospholipase family protein K07001 K07001; NTE family protein
D DR55_1608 iron-sulfur cluster assembly accessory family protein K15724 erpA; iron-sulfur cluster insertion protein
D DR55_2152 sufB; FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D DR55_2150 sufD; FeS assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D DR55_3076 yihY; YihY family inner membrane domain protein K07058 K07058; membrane protein
D DR55_3593 yihY; YihY family inner membrane domain protein K07058 K07058; membrane protein
D DR55_376 phosphoribosyl transferase domain protein K07100 K07100; putative phosphoribosyl transferase
D DR55_378 dienelactone hydrolase K07100 K07100; putative phosphoribosyl transferase
D DR55_18 rhodanese-like domain protein K07146 K07146; UPF0176 protein
D DR55_40 3-demethylubiquinone-9 3-methyltransferase family protein K04750 phnB; PhnB protein
D DR55_4712 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K04750 phnB; PhnB protein
D DR55_4978 hypothetical protein K11477 glcG; glc operon protein GlcG
D DR55_2880 fhuF; siderophore-iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF
D DR55_2105 cytochrome c oxidase caa3 assembly factor family protein K02351 K02351; putative membrane protein
D DR55_783 lemA family protein K03744 lemA; LemA protein
D DR55_2049 creA family protein K05805 creA; CreA protein
D DR55_3575 sporulation related domain protein K03749 dedD; DedD protein
D DR55_1705 hypothetical protein K03975 dedA; membrane-associated protein
D DR55_1639 paraquat-inducible A family protein K03808 pqiA; paraquat-inducible protein A
D DR55_1640 paraquat-inducible A family protein K03808 pqiA; paraquat-inducible protein A
D DR55_1212 hypothetical protein K08972 K08972; putative membrane protein
D DR55_2113 hypothetical protein K08983 K08983; putative membrane protein
D DR55_5310 hypothetical protein K08995 K08995; putative membrane protein
D DR55_5493 hypothetical protein K08995 K08995; putative membrane protein
D DR55_716 putative protein YchJ K09858 K09858; SEC-C motif domain protein
D DR55_802 phnA Zinc-Ribbon family protein K06193 phnA; protein PhnA
C 99997 Function unknown
D DR55_2555 ankyrin repeat family protein K06867 K06867; uncharacterized protein
D DR55_782 TLP18.3, Psb32 and MOLO-1 founding s of phosphatase family protein K06872 K06872; uncharacterized protein
D DR55_5634 hypothetical protein K06887 K06887; uncharacterized protein
D DR55_1020 hypothetical protein K06893 K06893; uncharacterized protein
D DR55_5233 snoaL-like domain protein K06893 K06893; uncharacterized protein
D DR55_2297 25-like lysozyme family protein K06903 W; Bacteriophage baseplate protein W
D DR55_4251 25-like lysozyme family protein K06903 W; Bacteriophage baseplate protein W
D DR55_2309 phage late control D family protein K06905 D; Bacteriophage probable baseplate hub protein
D DR55_4241 phage late control D family protein K06905 D; Bacteriophage probable baseplate hub protein
D DR55_2307 phage P2 GpU family protein K06906 gpU; phage tail protein
D DR55_4242 phage P2 GpU family protein K06906 gpU; phage tail protein
D DR55_2302 phage tail sheath family protein K06907 FI; Bacteriophage tail sheath protein
D DR55_4246 phage tail sheath family protein K06907 FI; Bacteriophage tail sheath protein
D DR55_2303 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D DR55_4245 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein
D DR55_1499 ATPase associated with various cellular activities family protein K06923 K06923; uncharacterized protein
D DR55_1112 coA binding domain protein K06929 K06929; uncharacterized protein
D DR55_754 hypothetical protein K06938 K06938; uncharacterized protein
D DR55_2668 hypothetical protein K06938 K06938; uncharacterized protein
D DR55_1874 putative protein YeiW K06940 K06940; uncharacterized protein
D DR55_1521 hypothetical protein K06950 K06950; uncharacterized protein
D DR55_5090 zinc carboxypeptidase family protein K06987 K06987; uncharacterized protein
D DR55_3595 succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein
D DR55_750 glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein K06991 K06991; uncharacterized protein
D DR55_4565 cupin domain protein K06995 K06995; uncharacterized protein
D DR55_1634 glyoxalase-like domain protein K06996 K06996; uncharacterized protein
D DR55_1538 alpha/beta hydrolase family protein K07000 K07000; uncharacterized protein
D DR55_5395 MMPL family protein K07003 K07003; uncharacterized protein
D DR55_5893 endonuclease/Exonuclease/phosphatase family protein K07004 K07004; uncharacterized protein
D DR55_4619 pyridoxamine 5'-phosphate oxidase family protein K07005 K07005; uncharacterized protein
D DR55_5767 pyridoxamine 5'-phosphate oxidase family protein K07006 K07006; uncharacterized protein
D DR55_677 prolyl oligopeptidase family protein K07018 K07018; uncharacterized protein
D DR55_331 alpha/beta hydrolase fold family protein K07019 K07019; uncharacterized protein
D DR55_5446 AAA domain protein K07028 K07028; uncharacterized protein
D DR55_4486 putative metal-dependent hydrolase family protein K07044 K07044; uncharacterized protein
D DR55_4741 putative metal-dependent hydrolase family protein K07044 K07044; uncharacterized protein
D DR55_5917 putative metal-dependent hydrolase family protein K07044 K07044; uncharacterized protein
D DR55_5821 putative metal-dependent hydrolase family protein K07044 K07044; uncharacterized protein
D DR55_4069 putative metal-dependent hydrolase family protein K07044 K07044; uncharacterized protein
D DR55_4412 putative metal-dependent hydrolase family protein K07044 K07044; uncharacterized protein
D DR55_5680 amidohydrolase family protein K07045 K07045; uncharacterized protein
D DR55_2949 putative permease family protein K07089 K07089; uncharacterized protein
D DR55_2674 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D DR55_4747 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D DR55_1805 sulfite exporter TauE/SafE family protein K07090 K07090; uncharacterized protein
D DR55_3333 hypothetical protein K07093 K07093; uncharacterized protein
D DR55_4447 calcineurin-like phosphoesterase family protein K07098 K07098; uncharacterized protein
D DR55_2640 phosphoribosyl transferase domain protein K07101 K07101; uncharacterized protein
D DR55_3942 sulfur transport family protein K07112 K07112; uncharacterized protein
D DR55_3943 sulfur transport family protein K07112 K07112; uncharacterized protein
D DR55_1076 SET domain protein K07117 K07117; uncharacterized protein
D DR55_3330 NAD dependent epimerase/dehydratase family protein K07118 K07118; uncharacterized protein
D DR55_4086 sel1 repeat family protein K07126 K07126; uncharacterized protein
D DR55_4642 MOSC domain protein K07140 K07140; MOSC domain-containing protein
D DR55_550 ATP-dependent protease La domain protein K07157 K07157; uncharacterized protein
D DR55_224 hypothetical protein K09005 K09005; uncharacterized protein
D DR55_3507 yqey-like family protein K09117 K09117; uncharacterized protein
D DR55_1237 thiS family protein K09122 K09122; uncharacterized protein
D DR55_4287 hypothetical protein K09129 K09129; uncharacterized protein
D DR55_674 hypothetical protein K09158 K09158; uncharacterized protein
D DR55_2790 hypothetical protein K09703 K09703; uncharacterized protein
D DR55_3433 hypothetical protein K09712 K09712; uncharacterized protein
D DR55_2709 YCII-related domain protein K09780 K09780; uncharacterized protein
D DR55_2929 hypothetical protein K09786 K09786; uncharacterized protein
D DR55_243 hypothetical protein K09791 K09791; uncharacterized protein
D DR55_2450 rnfH Ubiquitin family protein K09801 K09801; uncharacterized protein
D DR55_4955 hypothetical protein K09803 K09803; uncharacterized protein
D DR55_1637 hypothetical protein K09857 K09857; uncharacterized protein
D DR55_3368 hypothetical protein K09861 K09861; uncharacterized protein
D DR55_1501 hypothetical protein K09862 K09862; uncharacterized protein
D DR55_3903 hypothetical protein K09915 K09915; uncharacterized protein
D DR55_108 acetyltransferase domain protein K09919 K09919; uncharacterized protein
D DR55_881 hypothetical protein K09921 K09921; uncharacterized protein
D DR55_1990 hypothetical protein K09924 K09924; uncharacterized protein
D DR55_4681 winged helix DNA-binding domain protein K09927 K09927; uncharacterized protein
D DR55_2800 hypothetical protein K09930 K09930; uncharacterized protein
D DR55_5346 xylose isomerase-like TIM barrel family protein K09930 K09930; uncharacterized protein
D DR55_2637 hypothetical protein K09937 K09937; uncharacterized protein
D DR55_853 pepSY-associated TM helix family protein K09939 K09939; uncharacterized protein
D DR55_1419 hypothetical protein K09941 K09941; uncharacterized protein
D DR55_4419 glycolipid-binding family protein K09957 K09957; uncharacterized protein
D DR55_5362 hypothetical protein K09958 K09958; uncharacterized protein
D DR55_3286 hypothetical protein K09965 K09965; uncharacterized protein
D DR55_835 traB family protein K09973 K09973; uncharacterized protein
D DR55_2179 hutD family protein K09975 K09975; uncharacterized protein
D DR55_2402 hypothetical protein K09977 K09977; uncharacterized protein
D DR55_5702 hypothetical protein K09981 K09981; uncharacterized protein
D DR55_2460 hypothetical protein K09983 K09983; uncharacterized protein
D DR55_2878 hypothetical protein K09983 K09983; uncharacterized protein
D DR55_37 VWA domain containing CoxE-like family protein K09989 K09989; uncharacterized protein
D DR55_3708 2OG-Fe(II) oxygenase superfamily protein K09990 K09990; uncharacterized protein
D DR55_2579 hypothetical protein K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 26, 2024