+E Transcription factors KO #

  Transcription Factors - Bacillus subtilis subsp. spizizenii TU-B-10

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins D GYO_0220 modification methylase Bsu K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D GYO_0299 modification methylase Bsu K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D GYO_0355 ybbB; transcription factor, AraC family K21701 btr; AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon D GYO_0740 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator C LysR family D GYO_2217 HTH-type transcriptional regulator GltC K09681 gltC; LysR family transcriptional regulator, transcription activator of glutamate synthase operon D GYO_1231 HTH-type transcriptional regulator CitR K19242 citR; LysR family transcriptional regulator, repressor for citA D GYO_0577 YclA K21755 bsdA; LysR family transcriptional regulator, salicylic acid-responsive activator of bsdBCD D GYO_4151 YwfK K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon D GYO_2213 HTH-type transcriptional regulator GltR K21959 ftsR; LysR family transcriptional regulator, cell division regulator C DeoR family D GYO_1774 transcriptional regulator K03436 fruR2; DeoR family transcriptional regulator, fructose operon transcriptional repressor D GYO_4007 spoIIID; sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D D GYO_4384 DNA-binding protein iolR K06608 iolR; DeoR family transcriptional regulator, myo-inositol catabolism operon repressor D GYO_3993 transcriptional regulator K22103 glcR; DeoR family transcriptional regulator, carbon catabolite repression regulator D GYO_2789 CBS domain protein K23774 ccpN; DeoR family transcriptional regulator, catabolite repression regulator D GYO_0613 YcnK K21601 ycnK; DeoR family transcriptional regulator, copper-sensing transcriptional repressor C LacI family D GYO_3749 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GYO_3222 ccpA; catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GYO_3275 transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GYO_3950 ribose operon repressor K02529 galR; LacI family transcriptional regulator, galactose operon repressor D GYO_2437 HTH-type transcriptional regulator KdgR K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D GYO_1360 NTD biosynthesis operon regulator NtdR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D GYO_1546 transcriptional regulator K26609 exuR; LacI family transcriptional regulator, galacturonate utilization repressor C GntR family D GYO_3722 arabinose metabolism transcriptional repressor K02103 araR; GntR family transcriptional regulator, arabinose operon transcriptional repressor D GYO_1047 treR; trehalose operon repressor K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor D GYO_4420 transcriptional regulator, GntR family K03489 yydK; GntR family transcriptional regulator, transcriptional regulator of bglA D GYO_0843 transcriptional regulator K03492 gmuR; GntR family transcriptional regulator, regulator of glucomannan utilization D GYO_3556 HTH-type transcriptional regulator FrlR K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator D GYO_0435 transcriptional regulator K24966 gamR; GntR family transcriptional regulator, amino sugar utilization regulator D GYO_3840 transcriptional regulator K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D GYO_2038 UTRA domain protein K03710 K03710; GntR family transcriptional regulator D GYO_0449 YcbG K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D GYO_0605 transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D GYO_1237 YdeL K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D GYO_2288 transcriptional regulator, GntR family K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D GYO_0753 YdeL K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D GYO_0770 transcriptional regulator, GntR family K18907 norG; GntR family transcriptional regulator, regulator for abcA and norABC D GYO_3297 YtrA K07979 ytrA; GntR family transcriptional regulator D GYO_4408 gluconate operon transcriptional repressor K11476 gntR; GntR family transcriptional regulator, gluconate operon transcriptional repressor C TetR/AcrR family D GYO_3102 YsiA K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein D GYO_0716 TetR-family regulatory protein K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D GYO_0947 YezE K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D GYO_0469 transcriptional regulator, TetR family K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor D GYO_4399 transcriptional regulator K18939 lmrA; TetR/AcrR family transcriptional regulator, lmrAB and yxaGH operons repressor D GYO_2954 YrhI K22106 fatR; TetR/AcrR family transcriptional regulator, repressor of fatR-cypB operon C Lrp/AsnC family D GYO_0643 HTH-type transcriptional regulator lrpC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GYO_0715 transcriptional regulator, Lrp/AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GYO_0751 HTH-type transcriptional regulator LrpA K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GYO_0720 HTH-type transcriptional regulator LrpA K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GYO_3967 YwrC K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D GYO_0914 transcriptional regulator, asnc family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein C LuxR family D GYO_3087 germination protein gerE K01994 gerE; LuxR family transcriptional regulator, transcriptional regulator of spore coat protein D GYO_0870 tetratricopeptide repeat family K16247 gutR; LuxR family transcriptional regulator, glucitol operon activator C MarR family D GYO_4008 YwoH K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D GYO_1292 protease production regulatory protein hpr K09682 hpr; MarR family transcriptional regulator, protease production regulatory protein HPr D GYO_1695 YkvE K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D GYO_1658 YkoM K15973 mhqR; MarR family transcriptional regulator, 2-MHQ and catechol-resistance regulon repressor D GYO_1634 ohrR; organic hydroperoxide resistance transcriptional regulator OhrR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D GYO_2105 HTH-type transcriptional regulator GlnR K03713 glnR; MerR family transcriptional regulator, glutamine synthetase repressor D GYO_1247 HTH-type transcriptional regulator CueR K11923 cueR; MerR family transcriptional regulator, copper efflux regulator D GYO_2647 multidrug-efflux transporter 1 regulator K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene D GYO_2913 BmrR K19575 bmrR; MerR family transcriptional regulator, activator of bmr gene D GYO_4025 transcriptional regulator K21743 mta; MerR family transcriptional regulator, multidrug-efflux activator D GYO_2933 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator D GYO_1655 HTH-type transcriptional regulator TnrA K23776 tnrA; MerR family transcriptional regulator, global nitrogen regulator D GYO_1002 HTH-type transcriptional regulator YfmP K21902 yfmP; MerR family transcriptional regulator, repressor of the yfmOP operon C Fur family D GYO_2588 ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D GYO_2774 zur; Fur family metalloregulatory protein K02076 zurR; Fur family transcriptional regulator, zinc uptake regulator D GYO_1141 perR; PerR peroxide-sensing regulator K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator C IclR family C CRP/FNR family C Rrf2 family D GYO_1226 YhdE K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D GYO_2991 rrf2 family protein family protein K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor C ArsR family D GYO_0760 YdeT K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D GYO_2311 YozA K22043 czrA; ArsR family transcriptional regulator, zinc-responsive transcriptional repressor C XRE family D GYO_2721 sinR; HTH-type transcriptional regulator SinR K19449 sinR; XRE family transcriptional regulator, master regulator for biofilm formation D GYO_0820 transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D GYO_3772 slr; SinR-like transcription regulator K19417 slrR; XRE family transcriptional regulator, biofilm formation regulator C PadR family D GYO_1104 transcriptional regulator K26739 padR; PadR family transcriptional regulator, phenolic acid-responsive transcriptional regulator D GYO_3121 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator D GYO_4190 transcriptional regulator, PadR family K10947 K10947; PadR family transcriptional regulator C Other families D GYO_2712 transcriptional regulator mntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D GYO_1087 HTH-type transcriptional regulator GlvR K03481 glvR; RpiR family transcriptional regulator, glv operon transcriptional regulator D GYO_2471 birA; Biotin transcriptional regulator and biotin acetyl-CoA-carboxylase synthetase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D GYO_1363 oligopeptide ABC transporter, substrate-binding protein K11925 sgrR; SgrR family transcriptional regulator D GYO_3684 YvaO K22299 rghR; HTH-type transcriptional regulator, competence development regulator D GYO_3683 transcriptional repressor RghR K22299 rghR; HTH-type transcriptional regulator, competence development regulator D GYO_3385 YuaC K22109 gbsR; HTH-type transcriptional regulator, glycine betaine synthesis regulator D GYO_3702 conserved hypothetical protein K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator D GYO_3707 conserved hypothetical protein K22301 opcR; HTH-type transcriptional regulator, osmoprotectant uptake regulator D GYO_2948 YrhO K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator D GYO_1079 transcriptional regulator K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D GYO_3630 conserved hypothetical protein K26990 rsoA; sigma-O factor regulatory protein RsoA D GYO_3114 carbohydrate diacid regulator K02647 cdaR; carbohydrate diacid regulator D GYO_4444 arginine utilization regulatory protein RocR K06714 rocR; arginine utilization regulatory protein D GYO_0861 redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor D GYO_1971 codY; GTP-sensing transcriptional pleiotropic repressor CodY K03706 codY; transcriptional pleiotropic repressor D GYO_2258 transcription regulator, Cro/CI family -related protein K07727 K07727; putative transcriptional regulator D GYO_1176 conserved domain protein K07729 K07729; putative transcriptional regulator B Ribbon-helix-helix C CopG family D GYO_0686 antitoxin EndoAI K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C Other families B Other transcription factors C BglG family D GYO_2884 transcription antiterminator K03488 licT; beta-glucoside operon transcriptional antiterminator D GYO_4317 licT; transcription antiterminator LicT K03488 licT; beta-glucoside operon transcriptional antiterminator D GYO_4239 sacY; levansucrase and sucrase synthesis operon antiterminator K26931 sacY; levansucrase and sucrase synthesis operon transcriptional antiterminator D GYO_4197 sacPA operon antiterminator K26932 sacT; sacPA operon transcriptional antiterminator D GYO_1722 glcT; transcription antiterminator, GlcT K03480 glcT; transcriptional antiterminator D GYO_0634 HTH domain family K03483 mtlR; mannitol operon transcriptional activator D GYO_1503 HTH domain family K02538 manR; mannose operon transcriptional activator D GYO_4261 HTH domain family K03491 licR; probable licABCH operon transcriptional regulator C Others D GYO_3665 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D GYO_2889 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor D GYO_3535 purine catabolism regulatory protein K09684 pucR; PucR family transcriptional regulator, purine catabolism regulatory protein D GYO_0529 YcgP K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator D GYO_0046 abrB; transition state regulatory protein AbrB K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D GYO_1784 abh; putative transisition state regulator Abh K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes D GYO_0067 spoVT; sporulation transcriptional regulator SpoVT K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T D GYO_4511 spo0J; stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GYO_4514 protein YyaA K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D GYO_0733 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D GYO_1215 glpP; glycerol uptake operon antiterminator regulatory protein K02443 glpP; glycerol uptake operon antiterminator D GYO_2684 argR; arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D GYO_2113 xylose repressor K02565 nagC; N-acetylglucosamine repressor D GYO_2817 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D GYO_1470 tena/thi-4 family K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D GYO_1471 regulatory protein TenI K10810 tenI; thiazole tautomerase (transcriptional regulator TenI) [EC:5.3.99.10] D GYO_0109 transcriptional regulator CtsR K03708 ctsR; transcriptional regulator of stress and heat shock response D GYO_3849 conserved domain protein K03973 pspC; phage shock protein C D GYO_3719 cggR; central glycolytic gene regulator CggR K05311 cggR; central glycolytic genes regulator D GYO_4351 deoxyribonucleoside regulator K05346 deoR; deoxyribonucleoside regulator D GYO_1434 med; transcriptional activator protein med K05519 med; transcriptional activator of comK gene D GYO_2505 transcription attenuation protein mtrB K06285 mtrB; transcription attenuation protein (tryptophan RNA-binding attenuator protein) D GYO_1896 PyrR bifunctional protein K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D GYO_4148 rsfA; forespore-specific transcriptional regulator RsfA K06314 rsfA; prespore-specific regulator D GYO_1726 splA; negative regulator of the spore photoproduct lyase operon K06315 splA; transcriptional regulator of the spore photoproduct lyase operon D GYO_3506 negative regulator pai 2 K07734 paiB; transcriptional regulator D GYO_3150 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D GYO_4341 Hut operon positive regulatory protein K09683 hutP; hut operon positive regulatory protein D GYO_1344 comK; competence transcription factor ComK K02250 comK; competence protein ComK D GYO_1859 mraZ; MraZ protein K03925 mraZ; transcriptional regulator MraZ D GYO_3634 conserved hypothetical protein K26991 yvrL; membrane-bound negative regulator ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 5, 2024 #
Classification taken and modified from TRANSFAC 7.0