+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Bacillus subtilis subsp. subtilis 168

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D BSU15930 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C BSU25290 era; GTPase Era K03595 era; GTPase C BSU27920 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C BSU16600 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA C BSU24320 nusB; N utilization substance protein B K03625 nusB; transcription antitermination protein NusB C BSU01010 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D BSU30035 ytzG; 16S rRNA pseudouridine(516) synthase K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D BSU00420 ksgA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D BSU15740 rsmB; 16S rRNA m5C967 methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D BSU01060 ybxB; hypothetical protein K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D BSU25440 yqeU; ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D BSU41000 gidB; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D BSU15140 mraW; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D BSU00360 yabC; ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D BSU24260 yqxC; rRNA methyltransferase YqxC K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D BSU39010 yxjB; 23S rRNA (guanine-N(1)-)-methyltransferase YxjB K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D BSU00960 rlmB; 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D BSU40230 yydA; 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D BSU38360 ywbD; ribosomal RNA large subunit methyltransferase YwbD K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D BSU15750 yloN; 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D BSU24260 yqxC; rRNA methyltransferase YqxC K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D BSU06730 yefA; 23S rRNA (uracil-C(5))-methyltransferase RlmCD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D BSU08020 yfjO; RNA methyltransferase YfjO K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D BSU23160 rluB; ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D BSU15460 rluD; RNA pseudouridine synthase YlyB K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BSU11620 yjbO; RNA pseudouridine synthase YjbO K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D BSU09210 yhcT; RNA pseudouridine synthase YhcT K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C BSU05930 rimI; ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C BSU11890 yjcK; ribosomal-protein-alanine acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] C BSU04210 ydaF; ribosomal N-acetyltransferase YdaF K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] C BSU16020 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM C BSU25450 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] B rRNA processing factors C BSU15930 rnc; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] C BSU27390 yrrK; Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] C BSU00950 mrnC; mini-ribonuclease 3 K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-] B rRNA helicases C BSU39110 deaD; ATP-dependent RNA helicase DbpA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C BSU04580 cshA; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] C BSU25140 cshB; DEAD/DEAH box helicase K18692 cshB; ATP-dependent RNA helicase CshB [EC:5.6.2.7] B GTPases C BSU25290 era; GTPase Era K03595 era; GTPase C BSU15780 yloQ; ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C BSU22840 engA; GTPase Der K03977 engA; GTPase C BSU27920 obgE; GTPase ObgE K03979 obgE; GTPase [EC:3.6.5.-] C BSU16050 rbgA; ribosome biogenesis GTPase A K14540 rbgA; ribosome biogenesis GTPase A C BSU17430 ynbA; GTPase HflX K03665 hflX; GTPase C BSU25670 yqeH; hypothetical protein K06948 yqeH; 30S ribosome assembly GTPase B Other maturation factors C BSU36950 ywlC; tRNA threonylcarbamoyladenosine biosynthesis protein YwlC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C BSU27600 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C BSU16650 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C BSU16590 ylxS; ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP C BSU00030 yaaA; hypothetical protein K14761 rlbA; ribosome-associated protein C BSU25620 yqeL; hypothetical protein K09710 ybeB; ribosome-associated protein C BSU25320 yqfG; metalloprotease K07042 ybeY; probable rRNA maturation factor C BSU25650 yqeI; RNA-binding protein YqeI K07574 yhbY; RNA-binding protein C BSU35310 yvyD; sigma-54 modulation protein K05808 hpf; ribosome hibernation promoting factor C BSU40920 yyaF; GTP-dependent nucleic acid-binding protein EngD K06942 ychF; ribosome-binding ATPase C BSU15070 ylbN; hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024