+E Transcription factors KO #

  Transcription Factors - Brucella suis bv. 2 PT09143

% ! AEukaryotic type B Basic leucine zipper (bZIP) C AP-1(-like) components, Jun C AP-1(-like) components, Fos C AP-1(-like) components, Maf C AP-1(-like) components, NF-E2 C AP-1(-like) components, Fungal regulators C AP-1(-like) components, CRE-BP/ATF C CREB C C/EBP-like factors C bZIP/PAR C Plant bZIP factors C ZIP only B Basic helix-loop-helix (bHLH) C Ubiquitous (class A) factors C Myogenic transcription factors C Achaete-Scute C Tal/Twist/Atonal/Hen, Lymphoid factors C Tal/Twist/Atonal/Hen, Mesodermal Twist-like factors C Tal/Twist/Atonal/Hen, HEN C Tal/Twist/Atonal/Hen, Mesp C Tal/Twist/Atonal/Hen, Atonal C Tal/Twist/Atonal/Hen, Pancreatic factors C Hairy, Hairy/E(SPL) C Hairy, Fungal regulators C Factors with PAS domain C Yabby C INO C HLH domain only B Basic helix-loop-helix/leucine zipper (bHLH-ZIP) C Ubiquitous bHLH-ZIP factors C Cell cycle controlling factors, Myc C Cell cycle controlling factors, Mad/Max C Other bHLH-ZIP factors B Other basic domains C NF-1 C RF-X C AP-2 (bHSH) B Zinc finger C Cys4 thyroid hormone receptor-like C Cys4 hepatocyte nuclear factor 4-like C Cys4 estrogen receptor-like C Cys4 nerve growth factor IB-like C Cys4 Fushi tarazu-F1-like C Cys4 germ cell nuclear factor C Cys4 Knirps/DAX1-like C Cys4 GATA-factors C Cys2His2 SP/KLF family and related proteins C Cys2His2 GLI-like C Cys2His2 Snail C Cys2His2 BTB-ZF factors C Cys2His2 BED C Cys2His2 PRDM C Cys2His2 metabolic regulators in fungi C Cys2His2 others C Cys2HisCys zinc factors C Cys3His zinc factors C Cys2CysHis zinc factors C CXXC CpG-binding proteins C Cys6 metabolic regulators in fungi C Other zinc fingers B Helix-turn-helix C Homeo domain ANTP: HOXL C Homeo domain ANTP: NKL C Homeo domain Paired-related C Homeo domain LIM C Homeo domain POU C Homeo domain SINE C Homeo domain ZF C Homeo domain CUT C Homeo domain PROS C Homeo domain TALE C Homeo domain other C Fork head/winged helix developmental regulators C Fork head/winged helix tissue-specific regulators C Fork head/winged helix cell cycle-controlling factors, E2F C Fork head/winged helix cell cycle-controlling factors, DP C Fork head/winged helix other regulators C Heat shock factors C Tryptophan clusters Myb, Myb-factors C Tryptophan clusters Myb, Myb-like factors C Tryptophan clusters Ets-type C Tryptophan clusters interferon-regulating factors C TEA domain C ARID B beta-Scaffold factors with minor groove contacts C RHR (Rel homology region) Rel/Ankyrin C RHR (Rel homology region) Ankyrin only C RHR (Rel homology region) NF-AT C STAT C p53 C MADS-box regulators of differentiation, MEF-2 C MADS-box regulators of differentiation, Homeotic genes C MADS-box regulators of differentiation, Yeast regulators C MADS-box responders to external signals C SAND domain-containing proteins C TATA-binding proteins C HMG SOX C HMG TCF-1 C HMG2-related C UBF C Other HMG box factors C Heteromeric CCAAT factors C Grainyhead C Cold-shock domain factors, DbpA-like C Cold-shock domain factors, YB-1/DbpB-like C Cold-shock domain factors, FRG Y2-like C Runt C MYRF B Other transcription factors C HMGI(Y) C NUPR E Line #4 C Pocket domain Rb C Pocket domain CBP C T-box C DMRT C LRRFIP C TCP C AP2/ERF C WRKY C LOB C Copper-fist proteins fungal regulators C Others # AProkaryotic type B Helix-turn-helix C AraC family D BSPT1_II0580 Transcriptional regulator, AraC family K07506 K07506; AraC family transcriptional regulator D BSPT1_I1342 ADA regulatory protein / Methylated-DNA--protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D BSPT1_II0830 Methylated-DNA-protein-cysteine methyltransferase K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] C LysR family D BSPT1_I0622 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D BSPT1_II0849 Transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D BSPT1_II0311 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D BSPT1_II0647 Hydrogen peroxide-inducible genes activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D BSPT1_II0737 Transcriptional regulatory protein, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein C DeoR family D BSPT1_I0198 Glycerol-3-phosphate regulon repressor, DeoR family K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor C LacI family D BSPT1_I0204 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BSPT1_I1170 degA; putative Xylose regulator from LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BSPT1_I1865 Transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BSPT1_II0265 Maltose operon transcriptional repressor MalR, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor D BSPT1_II0225 Ribitol operon repressor K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor C GntR family D BSPT1_I0607 Transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D BSPT1_II0871 hutC; Histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D BSPT1_II0468 putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D BSPT1_II0856 putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family K24967 nagR; GntR family transcriptional regulator, N-acetylglucosamine utilization regulator D BSPT1_II1368 Transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D BSPT1_II0138 Glycolate utilization operon transcriptional activator GlcC K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex C TetR/AcrR family D BSPT1_I1165 betI; HTH-type transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D BSPT1_I0311 ttgR; Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D BSPT1_I0301 Transcriptional regulator RutR of pyrimidine catabolism (TetR family) K09017 rutR; TetR/AcrR family transcriptional regulator D BSPT1_II0419 Transcriptional regulator YbiH, TetR family K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity C Lrp/AsnC family D BSPT1_I1606 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BSPT1_II0663 PutR, transcriptional activator of PutA and PutP K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D BSPT1_I0851 Transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D BSPT1_II1113 Transcriptional regulator, AsnC family K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D BSPT1_II0709 Transcriptional regulator, AsnC family K26601 azlB; Lrp/AsnC family transcriptional regulator, repressor for azl operon C LuxR family D BSPT1_II0087 transcriptional regulator, LuxR family K21697 vjbR; LuxR family transcriptional regulator, quorum-sensing system regulator VjbR C MarR family D BSPT1_II0697 Transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D BSPT1_II1227 Transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D BSPT1_II0826 Organic hydroperoxide resistance transcriptional regulator K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator C MerR family D BSPT1_I0219 Transcriptional regulator, MerR family K19591 cueR; MerR family transcriptional regulator, copper efflux regulator C Fur family D BSPT1_II1092 Manganese uptake regulation protein MUR K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D BSPT1_II1307 Zinc uptake regulation protein ZUR K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D BSPT1_I1988 Iron-responsive regulator Irr K09826 irr; Fur family transcriptional regulator, iron response regulator D BSPT1_I1346 fur; Iron-responsive regulator Irr K09826 irr; Fur family transcriptional regulator, iron response regulator C IclR family D BSPT1_II1079 Transcriptional regulator, IclR family K20539 blcR; IclR family transcriptional regulator, blcABC operon repressor C CRP/FNR family D BSPT1_I1064 fnrA; transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D BSPT1_II0264 transcriptional regulator, Crp/Fnr family K13642 ftrB; CRP/FNR family transcriptional regulator, transcriptional activator FtrB D BSPT1_II0245 Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family) K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator D BSPT1_II0224 Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family) K21564 nnrR; CRP/FNR family transcriptional regulator, nitrogen oxide reductase regulator C Rrf2 family D BSPT1_II0514 Iron-responsive repressor RirA K13772 rirA; Rrf2 family transcriptional regulator, iron-responsive regulator C ArsR family D BSPT1_I1622 Transcriptional regulator, ArsR family K22042 hlyU; ArsR family transcriptional regulator, virulence genes transcriptional regulator C XRE family D BSPT1_I0523 Transcriptional regulator, XRE family K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator D BSPT1_I1647 putative transcriptional regulator K07110 ramB; XRE family transcriptional regulator, fatty acid utilization regulator C PadR family C Other families D BSPT1_I0900 Biotin-protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] B Ribbon-helix-helix C CopG family D BSPT1_II0744 nikR; Nickel responsive regulator NikR K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator C Other families D BSPT1_II0662 Proline dehydrogenase / Delta-1-pyrroline-5-carboxylate dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] B Other transcription factors C BglG family C Others D BSPT1_II0238 Nitrous oxide reductase maturation protein NosR K19339 nosR; NosR/NirI family transcriptional regulator, nitrous oxide reductase regulator D BSPT1_I0131 FrmR: Negative transcriptional regulator of formaldehyde detoxification operon K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D BSPT1_I1841 Cell division protein BolA K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D BSPT1_I1872 Chromosome (plasmid) partitioning protein ParB / Stage 0 sporulation protein J K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BSPT1_II1392 Plasmid replication protein RepB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D BSPT1_II1199 CarD-like transcriptional regulator K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription D BSPT1_I0171 hrcA; Heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D BSPT1_I0209 Thiaminase II K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2] D BSPT1_II0567 Regulator of nucleoside diphosphate kinase K06140 rnk; regulator of nucleoside diphosphate kinase D BSPT1_I1237 UPF0301 protein YqgE K07735 algH; putative transcriptional regulator D BSPT1_I0678 C4-type zinc finger protein, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor D BSPT1_I0954 Ribonucleotide reductase transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D BSPT1_I0848 Exopolysacchride production negative regulator ExoR K25885 exoR; exopolysaccharide production negative regulator ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: May 8, 2024 #
Classification taken and modified from TRANSFAC 7.0