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Transfer RNA Biogenesis - Castor canadensis (American beaver)
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AEukaryotic type
B 5'processing factors
C Ribonucrease P
D 109703452 Pop1; ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]
D 109693088 Pop4; ribonuclease P protein subunit p29 isoform X1 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5]
D 109696170 Pop5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]
D 109699985 Rpp30; ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]
D 109700200 Rpp21; ribonuclease P protein subunit p21 isoform X1 K03540 RPR2; ribonuclease P protein subunit RPR2 [EC:3.1.26.5]
D 109697259 Rpp14; ribonuclease P protein subunit p14 K14529 RPP14; ribonuclease P protein subunit RPP14 [EC:3.1.26.5]
D 109698084 Pop7; ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5]
D 109694121 Rpp25; ribonuclease P protein subunit p25 K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 109694680 Rpp25l; ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]
D 109691350 Rpp38; LOW QUALITY PROTEIN: ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5]
D 109698943 Rpp40; ribonuclease P protein subunit p40 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
D 109698731 LOW QUALITY PROTEIN: ribonuclease P protein subunit p40-like K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5]
B 3'processing and CCA adding factors
C 3'processing factors
D 109687031 Elac1; zinc phosphodiesterase ELAC protein 1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109687619 Elac2; zinc phosphodiesterase ELAC protein 2 isoform X1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109699529 Rnaset2; ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
D 109685056 pentatricopeptide repeat-containing protein 1, mitochondrial-like isoform X1 K17710 PTCD1; pentatricopeptide repeat domain-containing protein 1
C CCA adding factors
D 109701112 Trnt1; CCA tRNA nucleotidyltransferase 1, mitochondrial K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonuclease complex
D 109694951 Tsen2; tRNA-splicing endonuclease subunit Sen2 isoform X1 K15322 TSEN2; tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
D 109684000 Tsen34; tRNA-splicing endonuclease subunit Sen34 K15323 TSEN34; tRNA-splicing endonuclease subunit Sen34 [EC:4.6.1.16]
D 109690221 Tsen15; tRNA-splicing endonuclease subunit Sen15 K15324 TSEN15; tRNA-splicing endonuclease subunit Sen15
D 109681505 Tsen54; tRNA-splicing endonuclease subunit Sen54 K15326 TSEN54; tRNA-splicing endonuclease subunit Sen54
C tRNA splicing ligase complex
D 109698924 Rtcb; tRNA-splicing ligase RtcB homolog K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D 109696583 CUNH2orf49; ashwin isoform X1 K15432 ASW; ashwin
D 109701888 UPF0568 protein C14orf166 K15433 CGI99; RLL motif containing protein 1
D 109696453 CUNH14orf166; UPF0568 protein C14orf166 homolog K15433 CGI99; RLL motif containing protein 1
D 109699064 Fam98b; protein FAM98B K15434 FAM98B; protein FAM98B
D 109689430 Ddx1; ATP-dependent RNA helicase DDX1 K13177 DDX1; ATP-dependent RNA helicase DDX1 [EC:5.6.2.7]
D 109692984 Zbtb8os; protein archease isoform X1 K24956 ZBTB8OS; protein archease
C Other tRNA splicing factors
D 109683282 Trpt1; tRNA 2'-phosphotransferase 1 isoform X1 K10669 TRPT1; 2'-phosphotransferase [EC:2.7.1.160]
B tRNA transport factors
C tRNA export factors
D 109695688 Ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
D 109698135 Xpot; exportin-T isoform X1 K14288 XPOT; exportin-T
D 109687485 Xpo1; exportin-1 K14290 XPO1; exportin-1
D 109682133 Xpo5; exportin-5 K14289 XPO5; exportin-5
D 109701220 Eef1a1; elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
D 109692844 Eef1a2; elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
D 109687148 Scyl1; N-terminal kinase-like protein K08876 SCYL1; SCY1-like protein 1
D 109692873 Gtpbp1; GTP-binding protein 1 K24887 GTPBP1; GTP-binding protein 1
C tRNA import factors
D 109683960 Tnpo3; transportin-3 K15436 TRPO3; transportin-3
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 109682484 Eprs; LOW QUALITY PROTEIN: bifunctional glutamate/proline--tRNA ligase K14163 EPRS; bifunctional glutamyl/prolyl-tRNA synthetase [EC:6.1.1.17 6.1.1.15]
D 109699644 Ears2; probable glutamate--tRNA ligase, mitochondrial isoform X1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 109693817 Pars2; probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D 109682488 Iars2; isoleucine--tRNA ligase, mitochondrial isoform X1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109684635 Iars; isoleucine--tRNA ligase, cytoplasmic isoform X1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109686559 leucine--tRNA ligase, cytoplasmic K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 109686560 leucine--tRNA ligase, cytoplasmic-like K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 109686000 Mars; methionine--tRNA ligase, cytoplasmic K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 109681923 Mars2; methionine--tRNA ligase, mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 109691970 Qars; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 109681610 LOW QUALITY PROTEIN: arginine--tRNA ligase, cytoplasmic-like K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 109686474 Rars2; probable arginine--tRNA ligase, mitochondrial K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 109683823 Kars; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 109681797 Dars; LOW QUALITY PROTEIN: aspartate--tRNA ligase, cytoplasmic K22503 DARS1; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 109694720 Dars2; aspartate--tRNA ligase, mitochondrial isoform X1 K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 109699384 Aimp1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1 K15437 AIMP1; aminoacyl tRNA synthase complex-interacting multifunctional protein 1
D 109692918 Aimp2; aminoacyl tRNA synthase complex-interacting multifunctional protein 2 K15438 AIMP2; aminoacyl tRNA synthase complex-interacting multifunctional protein 2
D 109698165 Eef1e1; eukaryotic translation elongation factor 1 epsilon-1 K15439 EEF1E1; eukaryotic translation elongation factor 1 epsilon-1
C Other AARSs
D 109682121 Aars2; alanine--tRNA ligase, mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109684982 Aars; alanine--tRNA ligase, cytoplasmic K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109690905 Nars; asparagine--tRNA ligase, cytoplasmic isoform X1 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 109683799 Nars2; probable asparagine--tRNA ligase, mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 109681706 Gars; glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D 109681193 Tars2; threonine--tRNA ligase, mitochondrial isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109695790 Tarsl2; probable threonine--tRNA ligase 2, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109685415 Tars; threonine--tRNA ligase, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109685944 Sars; serine--tRNA ligase, cytoplasmic K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109695852 Sars2; serine--tRNA ligase, mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109687729 Cars2; LOW QUALITY PROTEIN: probable cysteine--tRNA ligase, mitochondrial K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109689784 Cars; cysteine--tRNA ligase, cytoplasmic isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109693526 Vars2; valine--tRNA ligase, mitochondrial isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109689586 Vars; valine--tRNA ligase isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109682112 Hars; histidine--tRNA ligase, cytoplasmic isoform X1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 109682113 probable histidine--tRNA ligase, mitochondrial isoform X1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 109692038 Fars2; phenylalanine--tRNA ligase, mitochondrial isoform X1 K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 109681260 Farsa; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 109698830 Farsb; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 109692981 Yars; tyrosine--tRNA ligase, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109677883 LOW QUALITY PROTEIN: tyrosine--tRNA ligase, mitochondrial-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109689201 Yars2; LOW QUALITY PROTEIN: tyrosine--tRNA ligase, mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109699041 Wars; tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 109694777 Wars2; LOW QUALITY PROTEIN: tryptophan--tRNA ligase, mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C Trans-editing factors
D 109678675 Dtd1; LOW QUALITY PROTEIN: D-tyrosyl-tRNA(Tyr) deacylase 1 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109690404 Dtd2; probable D-tyrosyl-tRNA(Tyr) deacylase 2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109687346 alanyl-tRNA editing protein Aarsd1 K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
C AARS associated factors
D 109682922 Trnau1ap; tRNA selenocysteine 1-associated protein 1 K25102 TRNAU1AP; tRNA selenocysteine 1-associated protein 1
D 109694339 Hint1; histidine triad nucleotide-binding protein 1 K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 109693380 Hint2; histidine triad nucleotide-binding protein 2, mitochondrial K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D 109700885 Hint3; histidine triad nucleotide-binding protein 3 K12150 HINT3; adenosine 5'-monophosphoramidase HINT3 [EC:3.9.1.-]
B tRNA modification factors
C Deaminases
D 109700198 Adat1; LOW QUALITY PROTEIN: tRNA-specific adenosine deaminase 1 K15440 TAD1; tRNA-specific adenosine deaminase 1 [EC:3.5.4.34]
D 109686358 Adat2; LOW QUALITY PROTEIN: tRNA-specific adenosine deaminase 2 K15441 TAD2; tRNA-specific adenosine deaminase 2 [EC:3.5.4.-]
D 109698861 Adat3; probable inactive tRNA-specific adenosine deaminase-like protein 3 K15442 TAD3; tRNA-specific adenosine deaminase 3
C Dihydorouridine synthases
D 109702631 Dus1l; tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like isoform X1 K05542 DUS1; tRNA-dihydrouridine synthase 1 [EC:1.3.1.88]
D 109691259 Dus2; tRNA-dihydrouridine(20) synthase [NAD(P)+]-like isoform X1 K05543 DUS2; tRNA-dihydrouridine synthase 2 [EC:1.3.1.91]
D 109688203 Dus3l; LOW QUALITY PROTEIN: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like K05544 DUS3; tRNA-dihydrouridine synthase 3 [EC:1.3.1.89]
D 109681354 Dus4l; tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like K05545 DUS4; tRNA-dihydrouridine synthase 4 [EC:1.3.1.90]
C Methylthiotransferase
D 109697330 Cdkal1; threonylcarbamoyladenosine tRNA methylthiotransferase K15865 CDKAL1; threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
C Methyltransferases
D 109681261 Trmt1; tRNA (guanine(26)-N(2))-dimethyltransferase isoform X1 K00555 TRMT1; tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]
D 109684340 Trmt2a; tRNA (uracil-5-)-methyltransferase homolog A isoform X1 K15332 TRMT2A; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]
D 109692626 Tarbp1; LOW QUALITY PROTEIN: probable methyltransferase TARBP1 K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
D 109678050 LOW QUALITY PROTEIN: probable methyltransferase TARBP1 K15333 TRM3; tRNA guanosine-2'-O-methyltransferase [EC:2.1.1.34]
D 109693822 Nsun2; tRNA (cytosine(34)-C(5))-methyltransferase isoform X1 K15335 NSUN2; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.203]
D 109699128 Nsun3; tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial isoform X1 K21969 NSUN3; tRNA (cytosine34-C5)-methyltransferase [EC:2.1.1.-]
D 109700366 Nsun6; putative methyltransferase NSUN6 K21971 NSUN6; methyltransferase NSUN6 [EC:2.1.1.-]
D 109686350 Trmt5; tRNA (guanine(37)-N1)-methyltransferase isoform X1 K15429 TRM5; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D 109679310 Trmt61b; tRNA (adenine(58)-N(1))-methyltransferase, mitochondrial K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 109682448 Trmt61a; tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D 109688464 Trmt6; tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 isoform X1 K03256 TRM6; tRNA (adenine58-N1)-methyltransferase non-catalytic subunit
D 109695528 Ftsj1; putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase isoform X1 K14864 FTSJ1; tRNA (cytidine32/guanosine34-2'-O)-methyltransferase [EC:2.1.1.205]
D 109686060 Mettl1; tRNA (guanine-N(7)-)-methyltransferase isoform X1 K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 109698113 methyltransferase-like protein 2A isoform X1 K24974 METTL2; tRNA N(3)-methylcytidine methyltransferase METTL2 [EC:2.1.1.-]
D 109692470 Mettl6; methyltransferase-like protein 6 isoform X1 K00599 METTL6; tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
D 109700254 Alkbh8; LOW QUALITY PROTEIN: alkylated DNA repair protein alkB homolog 8 K10770 ALKBH8; alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
D 109697419 Trmt10a; tRNA methyltransferase 10 homolog A K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 109682757 Trmt10b; tRNA methyltransferase 10 homolog B isoform X1 K15445 TRMT10; tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]
D 109698218 Trmt11; tRNA (guanine(10)-N2)-methyltransferase homolog K15430 TRM11; tRNA (guanine10-N2)-methyltransferase [EC:2.1.1.214]
D 109688165 Trmt13; tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 K15446 TRM13; tRNA:m4X modification enzyme [EC:2.1.1.225]
D 109687437 Trmt44; probable tRNA (uracil-O(2)-)-methyltransferase K15447 TRM44; tRNASer (uridine44-2'-O)-methyltransferase [EC:2.1.1.211]
D 109676015 Wdr4; tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 isoform X1 K15443 TRM82; tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
D 109683287 Trmt112; multifunctional methyltransferase subunit TRM112-like protein K15448 TRM112; multifunctional methyltransferase subunit TRM112
D 109700440 Trdmt1; tRNA (cytosine(38)-C(5))-methyltransferase isoform X1 K15336 TRDMT1; tRNA (cytosine38-C5)-methyltransferase [EC:2.1.1.204]
D 109697292 Trmo; tRNA (adenine(37)-N6)-methyltransferase isoform X1 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
D 109685928 LOW QUALITY PROTEIN: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase-like K15449 TYW1; tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]
D 109688115 Trmt12; tRNA wybutosine-synthesizing protein 2 homolog K07055 TRM12; tRNA wybutosine-synthesizing protein 2 [EC:2.5.1.114]
D 109699393 Tyw3; tRNA wybutosine-synthesizing protein 3 homolog K15450 TYW3; tRNA wybutosine-synthesizing protein 3 [EC:2.1.1.282]
D 109682287 Lcmt2; tRNA wybutosine-synthesizing protein 4 K15451 PPM2; tRNA wybutosine-synthesizing protein 4 [EC:2.1.1.290 2.3.1.231]
D 109700340 Tyw5; tRNA wybutosine-synthesizing protein 5 K18066 TYW5; tRNA wybutosine-synthesizing protein 5 [EC:1.14.11.42]
D 109697006 Bcdin3d; pre-miRNA 5'-monophosphate methyltransferase K25191 BCDIN3D; RNA 5'-monophosphate methyltransferase [EC:2.1.1.-]
C Psudouridine synthases
D 109697549 Pus1; tRNA pseudouridine synthase A, mitochondrial isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 109700084 Pus3; tRNA pseudouridine(38/39) synthase isoform X1 K01855 PUS3; tRNA pseudouridine38/39 synthase [EC:5.4.99.45]
D 109695584 Trub1; probable tRNA pseudouridine synthase 1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 109700563 Pus7l; pseudouridylate synthase 7 homolog-like protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 109695366 Pus7; pseudouridylate synthase 7 homolog isoform X1 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 109700078 Pus10; putative tRNA pseudouridine synthase Pus10 isoform X1 K07583 PUS10; tRNA pseudouridine synthase 10 [EC:5.4.99.25]
D 109698462 Rpusd4; RNA pseudouridylate synthase domain-containing protein 4 K22538 RPUSD4; mitochondrial RNA pseudouridine synthase RPUSD4 [EC:5.4.99.-]
C Thiolation factors
D 109699747 Trmu; LOW QUALITY PROTEIN: mitochondrial tRNA-specific 2-thiouridylase 1 K21027 TRMU; tRNA-5-taurinomethyluridine 2-sulfurtransferase [EC:2.8.1.14]
D 109689961 cytoplasmic tRNA 2-thiolation protein 1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 109683876 Ctu1; LOW QUALITY PROTEIN: cytoplasmic tRNA 2-thiolation protein 1 K14168 CTU1; cytoplasmic tRNA 2-thiolation protein 1 [EC:2.7.7.-]
D 109692743 Ctu2; cytoplasmic tRNA 2-thiolation protein 2 isoform X1 K14169 CTU2; cytoplasmic tRNA 2-thiolation protein 2
D 109682638 Nfs1; cysteine desulfurase, mitochondrial isoform X1 K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D 109686801 Urm1; ubiquitin-related modifier 1 K12161 URM1; ubiquitin related modifier 1
D 109693690 Mocs3; adenylyltransferase and sulfurtransferase MOCS3 K11996 MOCS3; adenylyltransferase and sulfurtransferase [EC:2.7.7.80 2.8.1.11]
C KEOPS/EKC complex
D 109689305 Tp53rk; TP53-regulating kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 109702179 TP53-regulating kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 109692028 Osgepl1; probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 109692128 Osgep; probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 109699976 Tprkb; EKC/KEOPS complex subunit TPRKB K15901 TPRKB; EKC/KEOPS complex subunit TPRKB/CGI121
D 109691906 Lage3; EKC/KEOPS complex subunit LAGE3 K15902 LAGE3; EKC/KEOPS complex subunit LAGE3/PCC1
D 109693574 Gon7; uncharacterized protein C14orf142 homolog K15903 GON7; EKC/KEOPS complex subunit GON7
C Elongator complex
D 109694135 Ikbkap; elongator complex protein 1 K11373 ELP1; elongator complex protein 1
D 109693444 Elp2; elongator complex protein 2 isoform X1 K11374 ELP2; elongator complex protein 2
D 109692538 Elp3; elongator complex protein 3 isoform X1 K07739 ELP3; elongator complex protein 3 (tRNA carboxymethyluridine synthase) [EC:2.3.1.311]
D 109686337 Elp4; elongator complex protein 4 K11375 ELP4; elongator complex protein 4
D 109674572 Elp5; elongator complex protein 5 K11376 ELP5; elongator complex protein 5
D 109686189 Elp6; elongator complex protein 6 isoform X1 K11377 ELP6; elongator complex protein 6
C Elongator related proteins
D 109682356 DPH3 homolog K15455 DPH3; diphthamide biosynthesis protein 3
D 109698159 Kti12; protein KTI12 homolog K15456 KTI12; protein KTI12
C Other tRNA modification factors
D 109692793 Yrdc; yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D 109691572 Trit1; tRNA dimethylallyltransferase, mitochondrial isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 109695613 Gtpbp3; tRNA modification GTPase GTPBP3, mitochondrial isoform X1 K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 109694316 Mto1; protein MTO1 homolog, mitochondrial K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 109689054 Qtrt1; queuine tRNA-ribosyltransferase catalytic subunit 1 isoform X1 K00777 QTRT1; queuine tRNA-ribosyltransferase catalytic subunit [EC:2.4.2.64]
D 109684533 Qtrt2; queuine tRNA-ribosyltransferase accessory subunit 2 K15407 QTRT2; queuine tRNA-ribosyltransferase accessory subunit
D 109682520 Sephs2; selenide, water dikinase 2 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109690085 Sephs1; selenide, water dikinase 1 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109685485 selenide, water dikinase 2-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109699473 Thumpd1; THUMP domain-containing protein 1 K06963 TAN1; tRNA acetyltransferase TAN1
D 109696233 Thg1l; probable tRNA(His) guanylyltransferase isoform X1 K10761 THG1; tRNA(His) guanylyltransferase [EC:2.7.7.79]
D 109691635 Ate1; arginyl-tRNA--protein transferase 1 isoform X1 K00685 ATE1; arginyl-tRNA---protein transferase [EC:2.3.2.8]
D 109691982 Dalrd3; DALR anticodon-binding domain-containing protein 3 isoform X1 K24973 DALRD3; DALR anticodon-binding domain-containing protein 3
B tRNA degradation factors
C TRAMP complex
D 109698371 Papd5; LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 109693821 Papd7; non-canonical poly(A) RNA polymerase PAPD7 isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 109696622 LOW QUALITY PROTEIN: non-canonical poly(A) RNA polymerase PAPD5-like K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
D 109682751 Zcchc7; zinc finger CCHC domain-containing protein 7 K12597 AIR1_2; protein AIR1/2
C Rapid tRNA decay (RTD) pathway factors
D 109699816 Xrn2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D 109682485 Bpnt1; 3'(2'),5'-bisphosphate nucleotidase 1 isoform X1 K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
C Other tRNA degradation factors
D 109695193 Ang; LOW QUALITY PROTEIN: angiogenin K16631 ANG; angiogenin [EC:3.1.27.-]
D 109696759 LOW QUALITY PROTEIN: schlafen family member 13-like K24459 SLFN13; schlafen family member 13 [EC:3.1.-.-]
D 109695311 interferon-induced protein with tetratricopeptide repeats 5 K24850 IFIT5; interferon-induced protein with tetratricopeptide repeats 5
#
AProkaryotic type
B 5'processing factors
C Ribonucrease P
B 3'processing and CCA adding factors
C 3'processing factors
D 109687031 Elac1; zinc phosphodiesterase ELAC protein 1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109687619 Elac2; zinc phosphodiesterase ELAC protein 2 isoform X1 K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D 109699529 Rnaset2; ribonuclease T2 K01166 RNASET2; ribonuclease T2 [EC:4.6.1.19]
C CCA adding factors
D 109701112 Trnt1; CCA tRNA nucleotidyltransferase 1, mitochondrial K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
B tRNA spricing factors
C tRNA splicing endonucleases
C tRNA splicing ligases
D 109698924 Rtcb; tRNA-splicing ligase RtcB homolog K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
C Other tRNA splicing factors
B tRNA transport factors
C tRNA export factors
B Aminoacyl-tRNA synthetases (AARSs)
C Multi-aminoacyl-tRNA synthetase complex (MSC)
D 109686559 leucine--tRNA ligase, cytoplasmic K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 109686560 leucine--tRNA ligase, cytoplasmic-like K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D 109693817 Pars2; probable proline--tRNA ligase, mitochondrial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
C Other AARSs
D 109692981 Yars; tyrosine--tRNA ligase, cytoplasmic K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109677883 LOW QUALITY PROTEIN: tyrosine--tRNA ligase, mitochondrial-like K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109689201 Yars2; LOW QUALITY PROTEIN: tyrosine--tRNA ligase, mitochondrial K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D 109699041 Wars; tryptophan--tRNA ligase, cytoplasmic K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 109694777 Wars2; LOW QUALITY PROTEIN: tryptophan--tRNA ligase, mitochondrial K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D 109681193 Tars2; threonine--tRNA ligase, mitochondrial isoform X1 K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109695790 Tarsl2; probable threonine--tRNA ligase 2, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109685415 Tars; threonine--tRNA ligase, cytoplasmic K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D 109682488 Iars2; isoleucine--tRNA ligase, mitochondrial isoform X1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109684635 Iars; isoleucine--tRNA ligase, cytoplasmic isoform X1 K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D 109683823 Kars; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D 109682121 Aars2; alanine--tRNA ligase, mitochondrial K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109684982 Aars; alanine--tRNA ligase, cytoplasmic K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D 109693526 Vars2; valine--tRNA ligase, mitochondrial isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109689586 Vars; valine--tRNA ligase isoform X1 K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D 109686000 Mars; methionine--tRNA ligase, cytoplasmic K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 109681923 Mars2; methionine--tRNA ligase, mitochondrial K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D 109685944 Sars; serine--tRNA ligase, cytoplasmic K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109695852 Sars2; serine--tRNA ligase, mitochondrial isoform X1 K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D 109694720 Dars2; aspartate--tRNA ligase, mitochondrial isoform X1 K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D 109687729 Cars2; LOW QUALITY PROTEIN: probable cysteine--tRNA ligase, mitochondrial K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109689784 Cars; cysteine--tRNA ligase, cytoplasmic isoform X1 K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D 109699644 Ears2; probable glutamate--tRNA ligase, mitochondrial isoform X1 K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D 109691970 Qars; glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D 109681610 LOW QUALITY PROTEIN: arginine--tRNA ligase, cytoplasmic-like K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 109686474 Rars2; probable arginine--tRNA ligase, mitochondrial K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D 109692038 Fars2; phenylalanine--tRNA ligase, mitochondrial isoform X1 K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 109681260 Farsa; phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D 109698830 Farsb; phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D 109682112 Hars; histidine--tRNA ligase, cytoplasmic isoform X1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 109682113 probable histidine--tRNA ligase, mitochondrial isoform X1 K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D 109690905 Nars; asparagine--tRNA ligase, cytoplasmic isoform X1 K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D 109683799 Nars2; probable asparagine--tRNA ligase, mitochondrial K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
C Trans-editing factors
D 109678675 Dtd1; LOW QUALITY PROTEIN: D-tyrosyl-tRNA(Tyr) deacylase 1 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109690404 Dtd2; probable D-tyrosyl-tRNA(Tyr) deacylase 2 K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D 109687346 alanyl-tRNA editing protein Aarsd1 K07050 AARSD1; misacylated tRNA(Ala) deacylase [EC:3.1.1.-]
B tRNA modification factors
C Deaminases
C Dihydorouridine synthases
C Methylthiotransferases
C Methyltransferases
D 109686060 Mettl1; tRNA (guanine-N(7)-)-methyltransferase isoform X1 K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D 109695613 Gtpbp3; tRNA modification GTPase GTPBP3, mitochondrial isoform X1 K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D 109697292 Trmo; tRNA (adenine(37)-N6)-methyltransferase isoform X1 K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-]
C Psudouridine synthases
D 109697549 Pus1; tRNA pseudouridine synthase A, mitochondrial isoform X1 K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D 109695584 Trub1; probable tRNA pseudouridine synthase 1 K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D 109700563 Pus7l; pseudouridylate synthase 7 homolog-like protein K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D 109695366 Pus7; pseudouridylate synthase 7 homolog isoform X1 K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
C Thiolation factors
D 109682638 Nfs1; cysteine desulfurase, mitochondrial isoform X1 K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C KEOPS/EKC complex
D 109689305 Tp53rk; TP53-regulating kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 109702179 TP53-regulating kinase K08851 TP53RK; TP53 regulating kinase and related kinases [EC:2.7.11.1]
D 109692028 Osgepl1; probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
D 109692128 Osgep; probable tRNA N6-adenosine threonylcarbamoyltransferase K01409 OSGEP; N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]
C Other tRNA modification factors
D 109694316 Mto1; protein MTO1 homolog, mitochondrial K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D 109691572 Trit1; tRNA dimethylallyltransferase, mitochondrial isoform X1 K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D 109699445 Pts; 6-pyruvoyl tetrahydrobiopterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D 109682520 Sephs2; selenide, water dikinase 2 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109690085 Sephs1; selenide, water dikinase 1 K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109685485 selenide, water dikinase 2-like K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D 109692793 Yrdc; yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
B tRNA degradation factors
C 109686298 Pnpt1; polyribonucleotide nucleotidyltransferase 1, mitochondrial K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 109696959 Isg20; interferon-stimulated gene 20 kDa protein K12579 ISG20; interferon-stimulated gene 20 kDa protein [EC:3.1.13.1]
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: February 29, 2024