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Transcription Machinery - Corvus cornix (hooded crow)
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AEukaryotic type
B RNA polymerase II system
C RNA polymerase II
D Core subunits
E 104697209 POLR2B; DNA-directed RNA polymerase II subunit RPB2 K03010 RPB2; DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
E 104691802 POLR2C; DNA-directed RNA polymerase II subunit RPB3 K03011 RPB3; DNA-directed RNA polymerase II subunit RPB3
E 120411001 DNA-directed RNA polymerase II subunit RPB11-a K03008 RPB11; DNA-directed RNA polymerase II subunit RPB11
D Pol II specific subunits
E 104693072 POLR2D; DNA-directed RNA polymerase II subunit RPB4 K03012 RPB4; DNA-directed RNA polymerase II subunit RPB4
D Pol I, II, III common subunits
E 104697062 POLR2E; LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 104696521 POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 104687986 POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 104692719 POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 104689917 POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
D Pol IV and V specific subunits
C Basal transcription factors
D TFIIA
E 104685686 GTF2A1; transcription initiation factor IIA subunit 1 K03122 TFIIA1; transcription initiation factor TFIIA large subunit
E 104683809 GTF2A2; transcription initiation factor IIA subunit 2 K03123 TFIIA2; transcription initiation factor TFIIA small subunit
E 104691433 transcription initiation factor IIA subunit 2-like K03123 TFIIA2; transcription initiation factor TFIIA small subunit
D TFIIB
E 104695320 GTF2B; transcription initiation factor IIB isoform X2 K03124 TFIIB; transcription initiation factor TFIIB
D TFIID
E 104684321 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 104687579 TBPL2; TATA box-binding protein-like 2 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 104690487 TBPL1; TATA box-binding protein-like 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 104691637 TAF1; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 1 K03125 TAF1; transcription initiation factor TFIID subunit 1 [EC:2.3.1.48 2.7.11.1]
E 104692671 TAF2; transcription initiation factor TFIID subunit 2 isoform X2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 104694515 TAF3; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 3 K14650 TAF3; transcription initiation factor TFIID subunit 3
E 104687635 TAF4; transcription initiation factor TFIID subunit 4 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 104687394 transcription initiation factor TFIID subunit 4-like K03129 TAF4; transcription initiation factor TFIID subunit 4
E 104687367 TAF4B; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4B K03129 TAF4; transcription initiation factor TFIID subunit 4
E 104684307 TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L K03130 TAF5; transcription initiation factor TFIID subunit 5
E 104697880 TAF5; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 104691738 TAF7L; transcription initiation factor TFIID subunit 7-like K03132 TAF7; transcription initiation factor TFIID subunit 7
E 104692368 TAF8; transcription initiation factor TFIID subunit 8 K14649 TAF8; transcription initiation factor TFIID subunit 8
E 104691347 TAF9B; transcription initiation factor TFIID subunit 9B K14535 TAF9; transcription initiation factor TFIID subunit 9
E 120410235 TAF10; transcription initiation factor TFIID subunit 10 K03134 TAF10; transcription initiation factor TFIID subunit 10
E 104692542 TAF11; transcription initiation factor TFIID subunit 11 isoform X1 K03135 TAF11; transcription initiation factor TFIID subunit 11
E 104697713 TAF12; transcription initiation factor TFIID subunit 12 isoform X1 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 104687200 TAF13; transcription initiation factor TFIID subunit 13 K03127 TAF13; transcription initiation factor TFIID subunit 13
E 104691102 TAF15; TATA-binding protein-associated factor 2N isoform X1 K14651 TAF15; transcription initiation factor TFIID subunit 15
D TFIIE
E 104687035 GTF2E1; general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 104690596 general transcription factor IIE subunit 1-like K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 104696835 GTF2E2; transcription initiation factor IIE subunit beta K03137 TFIIE2; transcription initiation factor TFIIE subunit beta
D TFIIF
E 104693176 GTF2F2; general transcription factor IIF subunit 2 K03139 TFIIF2; transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
D TFIIH
E 104685574 GTF2H1; general transcription factor IIH subunit 1 isoform X1 K03141 TFIIH1; transcription initiation factor TFIIH subunit 1
E 104689776 general transcription factor IIH subunit 2 K03142 TFIIH2; transcription initiation factor TFIIH subunit 2
E 104688727 GTF2H3; general transcription factor IIH subunit 3 isoform X1 K03143 TFIIH3; transcription initiation factor TFIIH subunit 3
E 104694203 ERCC3; general transcription and DNA repair factor IIH helicase subunit XPB K10843 ERCC3; DNA excision repair protein ERCC-3 [EC:5.6.2.4]
E 104689843 GTF2H5; general transcription factor IIH subunit 5 K10845 TTDA; TFIIH basal transcription factor complex TTD-A subunit
E 104686781 CDK7; cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 104688955 MNAT1; CDK-activating kinase assembly factor MAT1 isoform X1 K10842 MNAT1; CDK-activating kinase assembly factor MAT1
E 104693189 CCNH; cyclin-H K06634 CCNH; cyclin H
C Mediator complex
D Head
E 104683489 MED6; mediator of RNA polymerase II transcription subunit 6 K15128 MED6; mediator of RNA polymerase II transcription subunit 6
E 104695270 MED8; mediator of RNA polymerase II transcription subunit 8 isoform X2 K15129 MED8; mediator of RNA polymerase II transcription subunit 8
E 104690086 MED17; mediator of RNA polymerase II transcription subunit 17 K15133 MED17; mediator of RNA polymerase II transcription subunit 17
E 104685255 MED18; mediator of RNA polymerase II transcription subunit 18 K15135 MED18; mediator of RNA polymerase II transcription subunit 18
E 120410037 MED19; mediator of RNA polymerase II transcription subunit 19 K15137 MED19; mediator of RNA polymerase II transcription subunit 19
E 104692370 MED20; mediator of RNA polymerase II transcription subunit 20 isoform X1 K13528 MED20; mediator of RNA polymerase II transcription subunit 20
E 104688330 MED22; mediator of RNA polymerase II transcription subunit 22 isoform X1 K15139 MED22; mediator of RNA polymerase II transcription subunit 22
E 104690898 MED28; mediator of RNA polymerase II transcription subunit 28 K15141 MED28; mediator of RNA polymerase II transcription subunit 28
E 104692677 MED30; mediator of RNA polymerase II transcription subunit 30 isoform X1 K15143 MED30; mediator of RNA polymerase II transcription subunit 30
D Middle
E 104688901 mediator of RNA polymerase II transcription subunit 1 isoform X1 K15144 MED1; mediator of RNA polymerase II transcription subunit 1
E 120411315 MED1; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 1 K15144 MED1; mediator of RNA polymerase II transcription subunit 1
E 104690006 MED4; mediator of RNA polymerase II transcription subunit 4 K15146 MED4; mediator of RNA polymerase II transcription subunit 4
E 104689549 MED7; mediator of RNA polymerase II transcription subunit 7 K15148 MED7; mediator of RNA polymerase II transcription subunit 7
E 104684778 MED9; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 9 K15149 MED9; mediator of RNA polymerase II transcription subunit 9
E 104685870 MED10; mediator of RNA polymerase II transcription subunit 10 K15151 MED10; mediator of RNA polymerase II transcription subunit 10
E 104696152 MED21; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 21 K15152 MED21; mediator of RNA polymerase II transcription subunit 21
E 104691147 MED31; mediator of RNA polymerase II transcription subunit 31 K15153 MED31; mediator of RNA polymerase II transcription subunit 31
D Tail
E 104686355 MED14; mediator of RNA polymerase II transcription subunit 14 isoform X1 K15156 MED14; mediator of RNA polymerase II transcription subunit 14
E 104688579 MED15; mediator of RNA polymerase II transcription subunit 15 isoform X1 K15157 MED15; mediator of RNA polymerase II transcription subunit 15
E 104697053 MED16; mediator of RNA polymerase II transcription subunit 16 K15159 MED16; mediator of RNA polymerase II transcription subunit 16
D CDK-module
E 104689883 CDK8; cyclin-dependent kinase 8 isoform X4 K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E 104691395 CDK19; cyclin-dependent kinase 19 isoform X1 K02208 CDK8_11; cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]
E 104691892 CCNC; cyclin-C isoform X2 K15161 CCNC; cyclin-C
E 104691656 MED12; mediator of RNA polymerase II transcription subunit 12 isoform X1 K15162 MED12; mediator of RNA polymerase II transcription subunit 12
E 104688177 MED12L; mediator of RNA polymerase II transcription subunit 12-like protein K15162 MED12; mediator of RNA polymerase II transcription subunit 12
E 104691162 MED13; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13 K15164 MED13; mediator of RNA polymerase II transcription subunit 13
E 104695040 MED13L; LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 13-like K15164 MED13; mediator of RNA polymerase II transcription subunit 13
D Other mediators
E 104690612 MED23; mediator of RNA polymerase II transcription subunit 23 isoform X1 K15166 MED23; mediator of RNA polymerase II transcription subunit 23
E 104697733 MED24; mediator of RNA polymerase II transcription subunit 24 K15167 MED24; mediator of RNA polymerase II transcription subunit 24
E 104696989 MED26; mediator of RNA polymerase II transcription subunit 26 isoform X2 K15169 MED26; mediator of RNA polymerase II transcription subunit 26
E 104688314 MED27; mediator of RNA polymerase II transcription subunit 27 K15170 MED27; mediator of RNA polymerase II transcription subunit 27
C Coactivators
D SAGA/TFTC/STAGA complex
E 104689063 KAT2B; histone acetyltransferase KAT2B isoform X2 K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E 104697811 KAT2A; histone acetyltransferase KAT2A K06062 PCAF; histone acetyltransferase [EC:2.3.1.48]
E 104685044 transformation/transcription domain-associated protein K08874 TRRAP; transformation/transcription domain-associated protein
E 104685375 SUPT3H; transcription initiation protein SPT3 homolog K11313 SUPT3H; transcription initiation protein SPT3
E 104690984 TADA2A; transcriptional adapter 2-alpha isoform X1 K11314 TADA2A; transcriptional adapter 2-alpha
E 104690755 TADA2B; transcriptional adapter 2-beta K15127 TADA2B; transcriptional adapter 2-beta
E 104683483 TADA3; transcriptional adapter 3 K11315 TADA3; transcriptional adapter 3
E 104695444 TADA1; transcriptional adapter 1 K11317 TADA1; transcriptional adapter 1
E 104692671 TAF2; transcription initiation factor TFIID subunit 2 isoform X2 K03128 TAF2; transcription initiation factor TFIID subunit 2
E 104687635 TAF4; transcription initiation factor TFIID subunit 4 K03129 TAF4; transcription initiation factor TFIID subunit 4
E 104687394 transcription initiation factor TFIID subunit 4-like K03129 TAF4; transcription initiation factor TFIID subunit 4
E 104687367 TAF4B; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 4B K03129 TAF4; transcription initiation factor TFIID subunit 4
E 104684307 TAF5L; TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L K03130 TAF5; transcription initiation factor TFIID subunit 5
E 104697880 TAF5; LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 5 K03130 TAF5; transcription initiation factor TFIID subunit 5
E 104691738 TAF7L; transcription initiation factor TFIID subunit 7-like K03132 TAF7; transcription initiation factor TFIID subunit 7
E 104691347 TAF9B; transcription initiation factor TFIID subunit 9B K14535 TAF9; transcription initiation factor TFIID subunit 9
E 120410235 TAF10; transcription initiation factor TFIID subunit 10 K03134 TAF10; transcription initiation factor TFIID subunit 10
E 104697713 TAF12; transcription initiation factor TFIID subunit 12 isoform X1 K03126 TAF12; transcription initiation factor TFIID subunit 12
E 120411205 ATXN7L3; ataxin-7-like protein 3 K11363 SGF11; SAGA-associated factor 11
E 104685706 SUPT7L; STAGA complex 65 subunit gamma K11316 SUPT7L; STAGA complex 65 subunit gamma
E 104683503 ATXN7; ataxin-7 isoform X1 K11318 ATXN7; ataxin-7
E 104686869 ATXN7L1; ataxin-7-like protein 1 isoform X1 K11318 ATXN7; ataxin-7
E 104692565 ATXN7L2; LOW QUALITY PROTEIN: ataxin-7-like protein 2 K11318 ATXN7; ataxin-7
E 104693191 CHD1; chromodomain-helicase-DNA-binding protein 1 isoform X1 K11367 CHD1; chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
E 104692684 ENY2; transcription and mRNA export factor ENY2 K11368 ENY2; enhancer of yellow 2 transcription factor
E 104684786 USP22; ubiquitin carboxyl-terminal hydrolase 22 isoform X4 K11366 USP22_27_51; ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]
E 104687515 SF3B3; splicing factor 3B subunit 3 K12830 SF3B3; splicing factor 3B subunit 3
D BAF/PBAF complex
E 104685155 SMARCA2; probable global transcription activator SNF2L2 isoform X1 K11647 SMARCA2_4; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
E 104688595 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
E 104686372 SMARCC1; SWI/SNF complex subunit SMARCC1 K11649 SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
E 104684254 SMARCD3; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X2 K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 104698505 SMARCD2; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1 K11650 SMARCD; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
E 104697739 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1 K11651 SMARCE1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
E 104684799 ACTB; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 120410965 ACTG1; LOW QUALITY PROTEIN: actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 104688016 ACTL6A; actin-like protein 6A K11340 ACTL6A; actin-like protein 6A
E 120412116 ACTL6B; actin-like protein 6B K11652 ACTL6B; actin-like protein 6B
E 104689913 ARID1B; LOW QUALITY PROTEIN: AT-rich interactive domain-containing protein 1B K11653 ARID1; AT-rich interactive domain-containing protein 1
E 104698329 ARID2; AT-rich interactive domain-containing protein 2 K11765 ARID2; AT-rich interactive domain-containing protein 2
E 104683229 PBRM1; protein polybromo-1 isoform X1 K11757 PBRM1; protein polybromo-1
D SWI/SNF complex
E 104688595 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 K11648 SMARCB1; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
D RSC complex
D Others
E 104686591 SUB1; activated RNA polymerase II transcriptional coactivator p15 K25815 SUB1; activated RNA polymerase II transcriptional coactivator p15
E 104690151 CCAR1; cell division cycle and apoptosis regulator protein 1 isoform X1 K25827 CCAR1; cell division cycle and apoptosis regulator protein 1
C Other transcription-related factors
D Transcription elongation factors
E 104687675 TCEA2; transcription elongation factor A protein 2 isoform X3 K03145 TFIIS; transcription elongation factor S-II
E 104690389 TCEA1; transcription elongation factor A protein 1 isoform X1 K03145 TFIIS; transcription elongation factor S-II
E 104695805 SUPT4H1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 104691058 SUPT6H; transcription elongation factor SPT6 K11292 SUPT6H; transcription elongation factor SPT6
D Transcription termination factor
E 104687205 LOW QUALITY PROTEIN: transcription termination factor 2 K15173 TTF2; transcription termination factor 2 [EC:5.6.2.-]
E 104690311 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
E 104685511 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X2 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 104685025 CPSF4; cleavage and polyadenylation specificity factor subunit 4 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 109146069 CPSF4L; putative cleavage and polyadenylation specificity factor subunit 4-like protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 104684134 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 104688680 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 104685699 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 104693393 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
E 104691474 XRN2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 104687850 RPRD1B; regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1 K15559 RTT103; regulator of Ty1 transposition protein 103
E 104685917 RPRD1A; regulation of nuclear pre-mRNA domain-containing protein 1A isoform X1 K15559 RTT103; regulator of Ty1 transposition protein 103
E 104689952 SCAF8; SR-related and CTD-associated factor 8 K13191 RBM16; RNA-binding protein 16
E 104684203 SCAF4; LOW QUALITY PROTEIN: SR-related and CTD-associated factor 4 K13167 SCAF4; SR-related and CTD-associated factor 4
E 104688479 SETX; probable helicase senataxin K10706 SETX; senataxin [EC:5.6.2.-]
D PAF1 complex
E 104695587 CDC73; parafibromin K15175 CDC73; parafibromin
E 104684623 CTR9; RNA polymerase-associated protein CTR9 homolog K15176 CTR9; RNA polymerase-associated protein CTR9
E 104684107 LEO1; RNA polymerase-associated protein LEO1 K15177 LEO1; RNA polymerase-associated protein LEO1
E 104698394 RTF1; RNA polymerase-associated protein RTF1 homolog K15178 RTF1; RNA polymerase-associated protein RTF1
D NELF complex
E 104690919 NELFA; negative elongation factor A K15179 WHSC2; negative elongation factor A
E 104688227 NELFB; negative elongation factor B K15180 COBRA1; negative elongation factor B
E 104687624 NELFCD; negative elongation factor C/D isoform X2 K15181 TH1L; negative elongation factor C/D
D Super elongation complex (SEC)
E 104697382 ELL; RNA polymerase II elongation factor ELL K15183 ELL; RNA polymerase II elongation factor ELL
E 104697229 AFF1; AF4/FMR2 family member 1 isoform X1 K15184 AFF1; AF4/FMR2 family member 1
E 104689634 AFF4; AF4/FMR2 family member 4 K15185 AFF4; AF4/FMR2 family member 4
E 104689022 EAF1; ELL-associated factor 1 K15186 EAF; ELL-associated factor
E 104694012 EAF2; ELL-associated factor 2 isoform X3 K15186 EAF; ELL-associated factor
E 104697027 MLLT1; protein ENL isoform X1 K15187 MLLT1_3; YEATS domain-containing protein 1/3
E 104685278 MLLT3; protein AF-9 K15187 MLLT1_3; YEATS domain-containing protein 1/3
E 104694070 CCNT2; LOW QUALITY PROTEIN: cyclin-T2 K15188 CCNT; cyclin T
E 104688453 CDK9; cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D Little elongation complex (LEC)
E 104697382 ELL; RNA polymerase II elongation factor ELL K15183 ELL; RNA polymerase II elongation factor ELL
E 104688896 ICE1; little elongation complex subunit 1 isoform X4 K26143 ICE1; little elongation complex subunit 1
E 104683802 ICE2; little elongation complex subunit 2 isoform X1 K26144 ICE2; little elongation complex subunit 2
D Brd4/P-TEFb complex
E 104694070 CCNT2; LOW QUALITY PROTEIN: cyclin-T2 K15188 CCNT; cyclin T
E 104688453 CDK9; cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D BUR kinase complex
D CTDK-I complex
D 7SK RNP complex
E 120411375 HEXIM1; protein HEXIM1 K15189 HEXIM1_2; protein HEXIM1/2
E 120412124 MEPCE; 7SK snRNA methylphosphate capping enzyme K15190 MEPCE; 7SK snRNA methylphosphate capping enzyme [EC:2.1.1.-]
E 104696840 LARP7; la-related protein 7 K15191 LARP7; La-related protein 7
E 104694070 CCNT2; LOW QUALITY PROTEIN: cyclin-T2 K15188 CCNT; cyclin T
E 104688453 CDK9; cyclin-dependent kinase 9 K02211 CDK9; cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
D DBIRD complex
E 104695326 ZNF326; DBIRD complex subunit ZNF326 isoform X1 K13204 ZNF326; zinc finger protein 326
D Others
E 104695772 GTF2I; general transcription factor II-I isoform X1 K03121 TFII-I; transcription initiation factor TFII-I
E 104691142 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1 isoform X1 K27274 GTF2IRD1; general transcription factor II-I repeat domain-containing protein 1
E 104696161 BTAF1; TATA-binding protein-associated factor 172 K15192 BTAF1; TATA-binding protein-associated factor [EC:5.6.2.-]
E 104695347 DR1; protein Dr1 K21751 DR1; down-regulator of transcription 1
E 120412320 DRAP1; LOW QUALITY PROTEIN: dr1-associated corepressor K21752 DRAP1; Dr1-associated corepressor
E 104687931 SPTY2D1; protein SPT2 homolog K15193 SPTY2D1; protein SPT2
E 104691673 AFF2; AF4/FMR2 family member 2 isoform X3 K15194 AFF2; AF4/FMR2 family member 2
E 104686307 AFF3; LOW QUALITY PROTEIN: AF4/FMR2 family member 3 K15195 AFF3; AF4/FMR2 family member 3
E 104688860 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase K15732 CTDP1; RNA polymerase II subunit A C-terminal domain phosphatase [EC:3.1.3.16]
E 104686408 CTDSPL; CTD small phosphatase-like protein isoform X4 K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 104694198 CTDSP1; LOW QUALITY PROTEIN: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 K15731 CTDSP; carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase [EC:3.1.3.16]
E 104683673 IWS1; protein IWS1 homolog isoform X1 K17498 SPN1; transcription factor SPN1
E 104686418 CSRNP1; cysteine/serine-rich nuclear protein 1 K17494 CSRNP; cysteine/serine-rich nuclear protein
E 104693913 CSRNP3; cysteine/serine-rich nuclear protein 3 isoform X1 K17494 CSRNP; cysteine/serine-rich nuclear protein
E 104698462 RPAP1; RNA polymerase II-associated protein 1 K20826 RPAP1; RNA polymerase II-associated protein 1
E 104695562 RPAP2; putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1 K20827 RPAP2; RNA polymerase II-associated protein 2 [EC:3.1.3.16]
E 104698339 RPAP3; RNA polymerase II-associated protein 3 K23002 RPAP3; RNA polymerase II-associated protein 3
E 104686422 CCNK; cyclin-K K23326 CCNK; cyclin K
E 104684491 GPN1; GPN-loop GTPase 1 K24104 GPN; GPN-loop GTPase
E 104688836 GPN3; GPN-loop GTPase 3 K24104 GPN; GPN-loop GTPase
B RNA polymerase III system
C RNA polymerase III
D Core subunits
E 104697847 POLR3A; DNA-directed RNA polymerase III subunit RPC1 isoform X1 K03018 RPC1; DNA-directed RNA polymerase III subunit RPC1 [EC:2.7.7.6]
E 104696249 POLR3B; DNA-directed RNA polymerase III subunit RPC2 isoform X1 K03021 RPC2; DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6]
E 104684466 POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 104691703 DNA-directed RNA polymerases I and III subunit RPAC2-like K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol III specific subunits
E 120411180 POLR3D; DNA-directed RNA polymerase III subunit RPC4 isoform X1 K03026 RPC4; DNA-directed RNA polymerase III subunit RPC4
E 104685056 POLR3E; DNA-directed RNA polymerase III subunit RPC5 isoform X1 K14721 RPC5; DNA-directed RNA polymerase III subunit RPC5
E 104685601 POLR3F; DNA-directed RNA polymerase III subunit RPC6 K03025 RPC6; DNA-directed RNA polymerase III subunit RPC6
E 109143667 POLR3G; LOW QUALITY PROTEIN: DNA-directed RNA polymerase III subunit RPC7 K03024 RPC7; DNA-directed RNA polymerase III subunit RPC7
E 104696350 POLR3H; DNA-directed RNA polymerase III subunit RPC8 isoform X2 K03022 RPC8; DNA-directed RNA polymerase III subunit RPC8
E 104691217 DNA-directed RNA polymerase III subunit RPC9 isoform X1 K25304 RPC9; DNA-directed RNA polymerase III subunit RPC9
E 120410815 POLR3K; DNA-directed RNA polymerase III subunit RPC10 K03019 RPC11; DNA-directed RNA polymerase III subunit RPC11
D Pol I, II, III common subunits
E 104697062 POLR2E; LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 104696521 POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 104687986 POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 104692719 POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 104689917 POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D TFIIIA
E 104689986 GTF3A; transcription factor IIIA isoform X1 K09191 GTF3A; general transcription factor IIIA
D TFIIIB
E 104684321 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 104687579 TBPL2; TATA box-binding protein-like 2 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 104690487 TBPL1; TATA box-binding protein-like 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 104688930 BRF1; transcription factor IIIB 90 kDa subunit isoform X2 K15196 BRF1; transcription factor IIIB 90 kDa subunit
E 104694898 BRF2; transcription factor IIIB 50 kDa subunit K15197 BRF2; transcription factor IIIB 50 kDa subunit
E 104689818 BDP1; transcription factor TFIIIB component B'' homolog isoform X1 K15198 BDP1; transcription factor TFIIIB component B''
D TFIIIC
E 104684690 GTF3C1; general transcription factor 3C polypeptide 1 isoform X1 K15199 GTF3C1; general transcription factor 3C polypeptide 1
E 104684502 GTF3C2; general transcription factor 3C polypeptide 2 isoform X1 K15200 GTF3C2; general transcription factor 3C polypeptide 2
E 104694135 GTF3C3; general transcription factor 3C polypeptide 3 isoform X1 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
E 104688319 GTF3C4; general transcription factor 3C polypeptide 4 K11310 GTF3C4; general transcription factor 3C polypeptide 4 [EC:2.3.1.48]
E 104688328 GTF3C5; general transcription factor 3C polypeptide 5 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 104691374 GTF3C6; general transcription factor 3C polypeptide 6 isoform X1 K15203 GTF3C6; general transcription factor 3C polypeptide 6
D TFIIIC, fungi type
E 104688328 GTF3C5; general transcription factor 3C polypeptide 5 K15202 GTF3C5; general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
E 104694135 GTF3C3; general transcription factor 3C polypeptide 3 isoform X1 K15201 GTP3C3; general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
C Other transcription-related factors
D snRNA-activating protein complex (SNAPc)
E 104688939 SNAPC1; snRNA-activating protein complex subunit 1 K15208 SNAPC1; snRNA-activating protein complex subunit 1
E 104685199 SNAPC3; snRNA-activating protein complex subunit 3 K15210 SNAPC3; snRNA-activating protein complex subunit 3
E 104688356 SNAPC4; snRNA-activating protein complex subunit 4 isoform X1 K09453 SNAPC4; snRNA-activating protein complex subunit 4
E 104683879 SNAPC5; snRNA-activating protein complex subunit 5 K15211 SNAPC5; snRNA-activating protein complex subunit 5
D Octamer transcription factors
E 104689387 POU2F1; POU domain, class 2, transcription factor 1 isoform X3 K09364 POU2F; POU domain transcription factor, class 2
E 104692193 POU2F3; POU domain, class 2, transcription factor 3 isoform X2 K09364 POU2F; POU domain transcription factor, class 2
E 104688413 POU domain, class 5, transcription factor 3 K09367 POU5F; POU domain transcription factor, class 5
D Others
E 104689421 ZNF143; zinc finger protein 143 isoform X1 K20828 ZNF143_76; zinc finger protein 143/76
E 104692388 ZNF76; zinc finger protein 76 isoform X1 K20828 ZNF143_76; zinc finger protein 143/76
E 120409730 MAF1; repressor of RNA polymerase III transcription MAF1 homolog isoform X1 K25817 MAF1; repressor of RNA polymerase III transcription MAF1
B RNA polymerase I system
C RNA polymerase I
D Core subunits
E 104690805 POLR1A; DNA-directed RNA polymerase I subunit RPA1 isoform X1 K02999 RPA1; DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
E 104696654 POLR1B; DNA-directed RNA polymerase I subunit RPA2 K03002 RPA2; DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
E 104684466 POLR1C; DNA-directed RNA polymerases I and III subunit RPAC1 isoform X1 K03027 RPAC1; DNA-directed RNA polymerases I and III subunit RPAC1
E 104691703 DNA-directed RNA polymerases I and III subunit RPAC2-like K03020 RPAC2; DNA-directed RNA polymerases I and III subunit RPAC2
D Pol I specific subunits
E 104695843 POLR1E; LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit RPA49 K03005 RPA49; DNA-directed RNA polymerase I subunit RPA49
E 104689123 POLR1F; DNA-directed RNA polymerase I subunit RPA43 K03004 RPA43; DNA-directed RNA polymerase I subunit RPA43
D Pol I, II, III common subunits
E 104697062 POLR2E; LOW QUALITY PROTEIN: DNA-directed RNA polymerases I, II, and III subunit RPABC1 K03013 RPABC1; DNA-directed RNA polymerases I, II, and III subunit RPABC1
E 104696521 POLR2F; DNA-directed RNA polymerases I, II, and III subunit RPABC2 K03014 RPABC2; DNA-directed RNA polymerases I, II, and III subunit RPABC2
E 104687986 POLR2H; DNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1 K03016 RPABC3; DNA-directed RNA polymerases I, II, and III subunit RPABC3
E 104692719 POLR2K; DNA-directed RNA polymerases I, II, and III subunit RPABC4 K03009 RPABC4; DNA-directed RNA polymerases I, II, and III subunit RPABC4
E 104689917 POLR2L; DNA-directed RNA polymerases I, II, and III subunit RPABC5 K03007 RPABC5; DNA-directed RNA polymerases I, II, and III subunit RPABC5
C Basal transcription factors
D SL1/TIF-1B
E 104684321 TATA-box-binding protein K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 104687579 TBPL2; TATA box-binding protein-like 2 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 104690487 TBPL1; TATA box-binding protein-like 1 K03120 TBP; transcription initiation factor TFIID TATA-box-binding protein
E 104685617 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A K15212 TAF1A; TATA box-binding protein-associated factor RNA polymerase I subunit A
E 104685510 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1 K15213 TAF1B; TATA box-binding protein-associated factor RNA polymerase I subunit B
E 104686742 TAF1C; LOW QUALITY PROTEIN: TATA box-binding protein-associated factor RNA polymerase I subunit C K15214 TAF1C; TATA box-binding protein-associated factor RNA polymerase I subunit C
E 104690090 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D K15215 TAF1D; TATA box-binding protein-associated factor RNA polymerase I subunit D
C Other transcription-related factors
D UBF
E 120411192 UBTF; nucleolar transcription factor 1 isoform X1 K09273 UBTF; upstream-binding transcription factor
D Transcription initiation factors
E 104684978 RRN3; RNA polymerase I-specific transcription initiation factor RRN3 K15216 RRN3; RNA polymerase I-specific transcription initiation factor RRN3
D Transcription elongation factors
E 104695805 SUPT4H1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
D NoRC (nucleolar remodeling complex)
E 104697264 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 K11654 SMARCA5; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
D CTDK-I complex
D Transcription termination factors
E 104688316 TTF1; transcription termination factor 1 K15225 TTF1; transcription termination factor 1
E 104697762 CAVIN1; caveolae-associated protein 1 K19387 PTRF; polymerase I and transcript release factor
D Others
E 104697940 NOLC1; nucleolar and coiled-body phosphoprotein 1 K25818 NOLC1; nucleolar and coiled-body phosphoprotein 1
#
AProkaryotic type
B Bacterial type
C RNA polymerase
D Core subunits
D Sigma factors
C Other transcription-related factors
D RNA polymerase-associated proteins
D Transcription elongation factors
D Transcription termination factor
B Archaeal type
C RNA polymerase
D Core subunits
C Basal transcription factors
D TFB
E 104695320 GTF2B; transcription initiation factor IIB isoform X2 K03124 TFIIB; transcription initiation factor TFIIB
D TFE
E 104687035 GTF2E1; general transcription factor IIE subunit 1 K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
E 104690596 general transcription factor IIE subunit 1-like K03136 TFIIE1; transcription initiation factor TFIIE subunit alpha
D TFS
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 9, 2024