+D GENES KO #

  KEGG Orthology (KO) - Citrobacter farmeri

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:cfar00010] D CI104_17975 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CI104_23465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CI104_04570 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CI104_04575 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CI104_24210 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_24365 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_11910 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D CI104_22230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CI104_24145 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CI104_04295 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CI104_16645 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CI104_06185 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_04345 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_24350 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_09865 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_24165 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CI104_11625 gap; aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CI104_13600 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CI104_04340 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CI104_08160 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CI104_04415 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CI104_00640 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CI104_20035 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CI104_12170 pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D CI104_15330 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CI104_12015 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CI104_05010 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CI104_05015 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_13725 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CI104_13580 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_26390 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_27435 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_25785 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_14295 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CI104_09930 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CI104_26350 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_00750 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_21935 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D CI104_18260 ethanolamine utilization ethanol dehydrogenase EutG K04022 eutG; alcohol dehydrogenase D CI104_00755 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CI104_23215 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CI104_24490 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CI104_18690 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CI104_08170 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CI104_10145 bifunctional glucose-1-phosphatase/inositol phosphatase K01085 agp; glucose-1-phosphatase [EC:3.1.3.10] D CI104_24455 glucose-1-phosphatase K20866 yihX; glucose-1-phosphatase [EC:3.1.3.10] D CI104_07770 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CI104_11620 D-hexose-6-phosphate mutarotase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D CI104_21470 hypothetical protein K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D CI104_01730 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CI104_11855 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_21055 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_19785 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_18465 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_00255 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_18140 glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CI104_10575 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CI104_20025 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_12555 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_07020 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CI104_19780 PTS cellobiose/arbutin/salicin transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] C 00020 Citrate cycle (TCA cycle) [PATH:cfar00020] D CI104_07875 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CI104_14090 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CI104_05035 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CI104_19375 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CI104_11010 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CI104_07910 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CI104_07915 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_07925 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CI104_07920 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CI104_07900 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CI104_07905 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CI104_07890 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CI104_07895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CI104_22615 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CI104_22620 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CI104_22625 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CI104_22630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CI104_22965 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CI104_07990 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CI104_12575 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CI104_12580 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CI104_12230 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2] D CI104_04300 transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2] D CI104_02540 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CI104_17190 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CI104_01730 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CI104_05010 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CI104_05015 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CI104_13725 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:cfar00030] D CI104_23465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CI104_04570 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CI104_04575 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CI104_15320 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CI104_08225 6-phosphogluconolactonase K07404 pgl; 6-phosphogluconolactonase [EC:3.1.1.31] D CI104_16395 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CI104_21720 epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CI104_01810 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CI104_07260 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_07265 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_08975 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_08980 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_17605 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_17610 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_04275 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_18330 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_04490 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CI104_18325 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D CI104_21125 ribose-5-phosphate isomerase RpiA K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CI104_15000 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CI104_09945 deoC; 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CI104_14555 deoC; 2-deoxyribose-5-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CI104_21180 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4] D CI104_09940 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CI104_25085 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CI104_00180 rbsK; ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15] D CI104_21170 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CI104_07770 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CI104_23120 ribose 1,5-bisphosphokinase K05774 phnN; ribose 1,5-bisphosphokinase [EC:2.7.4.23] D CI104_14460 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CI104_15315 edd; phosphogluconate dehydratase K01690 edd; phosphogluconate dehydratase [EC:4.2.1.12] D CI104_10025 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CI104_15310 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CI104_00320 4-hydroxy-2-ketovalerate aldolase K17463 dgaF; 2-dehydro-3-deoxy-phosphogluconate aldolase [EC:4.1.2.14] D CI104_21450 SDR family oxidoreductase K00034 gdh; glucose 1-dehydrogenase [EC:1.1.1.47] D CI104_05100 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family K00117 gcd; quinoprotein glucose dehydrogenase [EC:1.1.5.2] D CI104_00895 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D CI104_21940 idnK; gluconate kinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CI104_01525 gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12] D CI104_00905 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D CI104_01090 sugar kinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] D CI104_00295 PTS fructose transporter subunit IIA K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203] D CI104_00300 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203] D CI104_00305 PTS sugar transporter subunit IIC K17466 dgaC; D-glucosaminate PTS system EIIC component D CI104_00310 PTS fructose transporter subunit IID K17467 dgaD; D-glucosaminate PTS system EIID component D CI104_04580 PTS fructose transporter subunit IID K17467 dgaD; D-glucosaminate PTS system EIID component D CI104_00315 SelA-like pyridoxal phosphate-dependent enzyme K17468 dgaE; D-glucosaminate-6-phosphate ammonia-lyase [EC:4.3.1.29] D CI104_16645 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CI104_06185 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_04345 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_24350 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_09865 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_22230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CI104_24145 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CI104_04295 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CI104_24210 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_24365 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_11910 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] C 00040 Pentose and glucuronate interconversions [PATH:cfar00040] D CI104_08230 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D CI104_20440 cupin domain-containing protein K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25] D CI104_20450 5-dehydro-4-deoxy-D-glucuronate isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17] D CI104_11885 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D CI104_20445 kduD; 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127] D CI104_03255 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D CI104_27310 glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12] D CI104_12930 altronate oxidoreductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58] D CI104_03260 altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7] D CI104_27300 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D CI104_16985 uxuA; mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8] D CI104_12765 starvation-sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D CI104_12970 starvation-sensing protein RspA K08323 rspA; mannonate dehydratase [EC:4.2.1.8] D CI104_27305 fructuronate reductase K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D CI104_12775 mannitol dehydrogenase family protein K00040 uxuB; fructuronate reductase [EC:1.1.1.57] D CI104_12755 Zn-dependent oxidoreductase K08322 rspB; L-gulonate 5-dehydrogenase [EC:1.1.1.380] D CI104_27285 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D CI104_16390 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CI104_14310 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_16460 galF; GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_23915 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D CI104_22445 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D CI104_22440 xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D CI104_23920 xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D CI104_23950 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D CI104_04760 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D CI104_21720 epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CI104_01810 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CI104_04765 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4] D CI104_04770 araB; ribulokinase K00853 araB; L-ribulokinase [EC:2.7.1.16] D CI104_00840 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17] D CI104_00835 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D CI104_24270 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D CI104_24280 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D CI104_11660 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D CI104_21670 YjhG/YagF family D-xylonate dehydratase K22396 yjhG; xylonate dehydratase [EC:4.2.1.82] D CI104_09805 YjhG/YagF family D-xylonate dehydratase K22396 yjhG; xylonate dehydratase [EC:4.2.1.82] D CI104_09900 dihydrodipicolinate synthase family protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] D CI104_01575 dihydrodipicolinate synthase family protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] D CI104_24240 dihydrodipicolinate synthase family protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] D CI104_09810 dihydrodipicolinate synthase family protein K22397 yjhH; 2-dehydro-3-deoxy-D-pentonate aldolase [EC:4.1.2.28] D CI104_18670 ribulokinase K00875 rbtK; D-ribulokinase [EC:2.7.1.47] D CI104_20160 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D CI104_20165 L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51] D CI104_20135 fucA; L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D CI104_04080 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:cfar00051] D CI104_22245 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CI104_06115 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CI104_12570 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CI104_03320 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CI104_16490 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D CI104_16495 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CI104_16515 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D CI104_16510 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D CI104_20160 fucI; L-fucose isomerase K01818 fucI; L-fucose/D-arabinose isomerase [EC:5.3.1.25 5.3.1.3] D CI104_20165 L-fuculokinase K00879 fucK; L-fuculokinase [EC:2.7.1.51] D CI104_20135 fucA; L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D CI104_04080 L-fuculose-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D CI104_00345 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D CI104_17370 L-rhamnonate dehydratase K12661 LRA3; L-rhamnonate dehydratase [EC:4.2.1.90] D CI104_17360 2-keto-3-deoxy-L-rhamnonate aldolase K12660 rhmA; 2-dehydro-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53] D CI104_21505 2-dehydro-3-deoxyglucarate aldolase K12660 rhmA; 2-dehydro-3-deoxy-L-rhamnonate aldolase [EC:4.1.2.53] D CI104_24275 rhaA; L-rhamnose isomerase K01813 rhaA; L-rhamnose isomerase [EC:5.3.1.14] D CI104_24270 rhamnulokinase K00848 rhaB; rhamnulokinase [EC:2.7.1.5] D CI104_24280 rhamnulose-1-phosphate aldolase K01629 rhaD; rhamnulose-1-phosphate aldolase [EC:4.1.2.19] D CI104_15925 mannosyl-3-phosphoglycerate phosphatase-related protein K07026 E3.1.3.70; mannosyl-3-phosphoglycerate phosphatase [EC:3.1.3.70] D CI104_24210 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_24365 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_11910 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D CI104_22230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CI104_24145 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CI104_04295 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CI104_00715 mannitol-1-phosphate 5-dehydrogenase K00009 mtlD; mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] D CI104_23540 NAD(P)-dependent oxidoreductase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D CI104_19730 sorbitol 6-phosphate dehydrogenase K00068 srlD; sorbitol-6-phosphate 2-dehydrogenase [EC:1.1.1.140] D CI104_23565 L-sorbose 1-phosphate reductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-] D CI104_04290 L-sorbose 1-phosphate reductase K19956 sorE; L-sorbose 1-phosphate reductase [EC:1.1.1.-] D CI104_16960 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CI104_11660 alcohol dehydrogenase K00008 SORD; L-iditol 2-dehydrogenase [EC:1.1.1.14] D CI104_00835 xylA; xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5] D CI104_16645 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CI104_06185 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_04345 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_24350 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_09865 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_24165 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CI104_15000 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6] D CI104_09875 DNA-binding protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D CI104_16955 PTS fructose transporter subunit EIIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CI104_09870 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CI104_04595 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CI104_15125 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CI104_15130 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CI104_04585 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CI104_15135 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CI104_04280 cmtB; PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D CI104_00720 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D CI104_04285 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D CI104_17575 sugar phosphatase K19270 hxpA; mannitol-1-/sugar-/sorbitol-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50] D CI104_11890 2-deoxyglucose-6-phosphatase K24204 hxpB; mannitol-1-/sugar-/sorbitol-6-/2-deoxyglucose-6-phosphatase [EC:3.1.3.22 3.1.3.23 3.1.3.50 3.1.3.68] D CI104_19725 PTS glucitol/sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D CI104_17290 PTS glucose transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D CI104_17285 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D CI104_19720 srlE; PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D CI104_19715 srlA; PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component D CI104_17295 PTS sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component D CI104_23545 PTS sorbose transporter subunit IIA K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D CI104_23550 PTS fructose transporter subunit IIB K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D CI104_23555 PTS mannose/fructose/sorbose transporter subunit IIC K02814 sorA; sorbose PTS system EIIC component D CI104_23560 PTS mannose transporter subunit IID K02815 sorM; sorbose PTS system EIID component C 00052 Galactose metabolism [PATH:cfar00052] D CI104_24490 aldose epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CI104_18690 aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CI104_08170 galM; galactose-1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3] D CI104_08175 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CI104_08180 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CI104_08185 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CI104_14310 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_16460 galF; GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_07770 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CI104_17975 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CI104_05920 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CI104_22985 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] D CI104_13515 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D CI104_13500 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D CI104_13505 permease K02775 gatC; galactitol PTS system EIIC component D CI104_02380 sugar kinase K21621 fk; tagatose kinase [EC:2.7.1.101] D CI104_02410 sugar kinase K21621 fk; tagatose kinase [EC:2.7.1.101] D CI104_24210 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_24365 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_11910 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D CI104_03030 tagatose bisphosphate family class II aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D CI104_02390 tagatose bisphosphate family class II aldolase K08302 gatY-kbaY; tagatose 1,6-diphosphate aldolase GatY/KbaY [EC:4.1.2.40] D CI104_03065 tagatose-bisphosphate aldolase subunit KbaZ K16371 gatZ-kbaZ; D-tagatose-1,6-bisphosphate aldolase subunit GatZ/KbaZ D CI104_00045 galactonate dehydratase K01684 dgoD; galactonate dehydratase [EC:4.2.1.6] D CI104_10035 2-dehydro-3-deoxygalactonokinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D CI104_10040 hypothetical protein K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D CI104_00035 2-oxo-3-deoxygalactonate kinase K00883 dgoK; 2-dehydro-3-deoxygalactonokinase [EC:2.7.1.58] D CI104_00040 2-dehydro-3-deoxy-6-phosphogalactonate aldolase K01631 dgoA; 2-dehydro-3-deoxyphosphogalactonate aldolase [EC:4.1.2.21] D CI104_22250 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CI104_06150 alpha-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CI104_03045 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D CI104_03060 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D CI104_03055 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D CI104_03050 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D CI104_03040 nagA; N-acetylglucosamine-6-phosphate deacetylase K02079 agaA; N-acetylgalactosamine-6-phosphate deacetylase [EC:3.5.1.25] D CI104_03035 AgaS family sugar isomerase K02082 agaS; D-galactosamine 6-phosphate deaminase/isomerase [EC:3.5.99.-] D CI104_03025 PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D CI104_03020 PTS N-acetylgalactosamine transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component D CI104_03015 PTS N-acetylgalactosamine transporter subunit IID K10986 agaD; galactosamine PTS system EIID component C 00053 Ascorbate and aldarate metabolism [PATH:cfar00053] D CI104_16390 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CI104_27285 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D CI104_00345 aldo/keto reductase K00064 E1.1.1.122; D-threo-aldose 1-dehydrogenase [EC:1.1.1.122] D CI104_21335 galactonate oxidoreductase K23007 lgoD; L-galactonate 5-dehydrogenase [EC:1.1.1.414] D CI104_08970 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_17625 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_06205 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_22450 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_24340 PTS fructose transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_08990 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_17620 PTS mannitol transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_06200 PTS mannose transporter subunit IIA K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_22455 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_24360 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_08985 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_17615 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_06195 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_22460 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_24355 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_22465 L-ascorbate-6-phosphate lactonase K03476 ulaG; L-ascorbate 6-phosphate lactonase [EC:3.1.1.-] D CI104_22445 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase UlaD K03078 ulaD; 3-dehydro-L-gulonate-6-phosphate decarboxylase [EC:4.1.1.85] D CI104_22440 xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D CI104_23920 xylulose 5-phosphate 3-epimerase K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22] D CI104_23950 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D CI104_04760 araD; L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4] D CI104_23915 carbohydrate kinase K00880 lyxK; L-xylulokinase [EC:2.7.1.53] D CI104_20070 gudD; glucarate dehydratase K01706 gudD; glucarate dehydratase [EC:4.2.1.40] D CI104_03125 5-keto-4-deoxy-D-glucarate aldolase K01630 garL; 2-dehydro-3-deoxyglucarate aldolase [EC:4.1.2.20] D CI104_03115 garD; galactarate dehydratase K01708 garD; galactarate dehydratase [EC:4.2.1.42] D CI104_13290 L-talarate/galactarate dehydratase K20023 talrD-galrD; L-talarate/galactarate dehydratase [EC:4.2.1.156 4.2.1.42] C 00500 Starch and sucrose metabolism [PATH:cfar00500] D CI104_18775 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CI104_22250 glycosyl hydrolase family 32 K01193 INV; beta-fructofuranosidase [EC:3.2.1.26] D CI104_06150 alpha-glycosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20] D CI104_14310 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_16460 galF; GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_16760 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D CI104_01050 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D CI104_11845 PTS N N'-diacetylchitobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CI104_23755 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CI104_00250 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CI104_11835 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_05820 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_23750 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_00265 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_11840 PTS N,N'-diacetylchitobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CI104_21270 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CI104_18435 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D CI104_00260 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CI104_11855 6-phospho-beta-glucosidase K01222 E3.2.1.86A; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_21055 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_19785 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_18465 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_00255 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86] D CI104_01555 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CI104_01560 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D CI104_01545 glgB; glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CI104_01565 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CI104_01655 maltodextrin phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CI104_01550 glgX; glycogen debranching enzyme K02438 glgX; glycogen debranching enzyme [EC:3.2.1.196] D CI104_00800 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D CI104_15820 alpha-amylase K01176 AMY; alpha-amylase [EC:3.2.1.1] D CI104_01660 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CI104_13930 pgmB; beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6] D CI104_18140 glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CI104_20025 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_12555 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_00095 PTS alpha-glucoside transporter subunit IICB K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D CI104_00425 PTS glucose transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D CI104_00100 6-phospho-alpha-glucosidase K01232 glvA; maltose-6'-phosphate glucosidase [EC:3.2.1.122] D CI104_15570 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CI104_15575 trehalose-phosphatase K01087 otsB; trehalose 6-phosphate phosphatase [EC:3.1.3.12] D CI104_14590 treA; alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D CI104_01145 treF; alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D CI104_22125 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D CI104_22130 treC; glucohydrolase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D CI104_03345 alpha-glucosidase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93] D CI104_07770 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CI104_17975 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CI104_23465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CI104_04570 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CI104_04575 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CI104_22245 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CI104_06115 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cfar00520] D CI104_11645 chitinase K01183 E3.2.1.14; chitinase [EC:3.2.1.14] D CI104_10605 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CI104_18140 glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CI104_07705 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CI104_03085 sugar kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D CI104_10930 N-acetylglucosamine kinase K00884 NAGK; N-acetylglucosamine kinase [EC:2.7.1.59] D CI104_07690 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] D CI104_07695 glucosamine-6-phosphate deaminase K02564 nagB; glucosamine-6-phosphate deaminase [EC:3.5.99.6] D CI104_22245 aminoimidazole riboside kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CI104_06115 fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D CI104_25200 glmS; glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CI104_27370 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CI104_02825 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CI104_25195 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CI104_18780 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] D CI104_12455 anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] D CI104_02760 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CI104_23850 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CI104_02615 N-acetylmannosamine kinase K00885 nanK; N-acylmannosamine kinase [EC:2.7.1.60] D CI104_02610 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D CI104_20020 N-acetylmannosamine-6-phosphate 2-epimerase K01788 nanE; N-acylglucosamine-6-phosphate 2-epimerase [EC:5.1.3.9] D CI104_02600 nanA; N-acetylneuraminate lyase K01639 E4.1.3.3; N-acetylneuraminate lyase [EC:4.1.3.3] D CI104_24915 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CI104_24910 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CI104_22315 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] D CI104_16440 fnlA; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D CI104_17410 bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D CI104_17400 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CI104_17405 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D CI104_17415 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D CI104_21660 glycoside hydrolase 43 family protein K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37] D CI104_10575 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CI104_20025 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_12555 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_07020 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CI104_17975 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CI104_07770 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CI104_14310 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_16460 galF; GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_16390 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CI104_08175 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CI104_08180 galT; galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] D CI104_08185 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CI104_04595 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CI104_15125 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CI104_15130 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CI104_04585 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CI104_15135 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CI104_23465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CI104_04570 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CI104_04575 glucose-6-phosphate isomerase K06859 pgi1; glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] D CI104_12570 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CI104_03320 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CI104_16490 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D CI104_16495 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CI104_16515 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D CI104_16510 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D CI104_01555 glgC; glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:cfar00620] D CI104_23215 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CI104_13725 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CI104_05010 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CI104_05015 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_09005 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CI104_03165 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CI104_14295 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CI104_18270 aldehyde dehydrogenase EutE K04021 eutE; aldehyde dehydrogenase D CI104_09930 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CI104_26350 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_00750 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_13580 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_26390 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_27435 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_25785 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_21935 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D CI104_18260 ethanolamine utilization ethanol dehydrogenase EutG K04022 eutG; alcohol dehydrogenase D CI104_17590 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CI104_17595 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CI104_18285 pta; phosphate acetyltransferase K04020 eutD; phosphotransacetylase D CI104_12170 pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D CI104_15330 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CI104_05375 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CI104_02425 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CI104_02420 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CI104_17725 accD; acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CI104_09305 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CI104_00755 aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D CI104_00685 lldD; alpha-hydroxy-acid oxidizing enzyme K00101 lldD; L-lactate dehydrogenase (cytochrome) [EC:1.1.2.3] D CI104_08795 pyruvate oxidase K00156 poxB; pyruvate dehydrogenase (quinone) [EC:1.2.5.1] D CI104_13705 2-hydroxyacid dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28] D CI104_16765 D-lactate dehydrogenase K03777 dld; D-lactate dehydrogenase (quinone) [EC:1.1.5.12] D CI104_13605 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D CI104_12400 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CI104_13845 glyoxalase/bleomycin resistance/extradiol dioxygenase family protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D CI104_09130 MBL fold metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CI104_05515 hydroxyacylglutathione hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D CI104_10215 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CI104_00895 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D CI104_13115 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CI104_18315 NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D CI104_02540 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CI104_17190 mqo; malate dehydrogenase (quinone) K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4] D CI104_22965 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CI104_07990 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CI104_12575 fumarate hydratase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D CI104_12580 fumC; class II fumarate hydratase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D CI104_12230 hypothetical protein K01675 fumD; fumarate hydratase D [EC:4.2.1.2] D CI104_04300 transcriptional regulator K01774 fumE; fumarate hydratase E [EC:4.2.1.2] D CI104_22615 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CI104_22620 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CI104_22625 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CI104_22630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CI104_23975 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CI104_01730 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49] D CI104_12015 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CI104_23620 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_04830 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cfar00630] D CI104_23615 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D CI104_23215 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CI104_23620 malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D CI104_02540 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CI104_07875 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D CI104_14090 acnA; aconitate hydratase 1 K01681 ACO; aconitate hydratase [EC:4.2.1.3] D CI104_05035 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CI104_19375 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_08020 methylaspartate mutase subunit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D CI104_08030 methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] D CI104_08015 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D CI104_11865 catalase K03781 katE; catalase [EC:1.11.1.6] D CI104_10215 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CI104_00895 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D CI104_01815 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D CI104_24530 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CI104_18715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CI104_21065 aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CI104_21075 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_21070 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CI104_03130 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D CI104_03135 glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CI104_20065 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CI104_13605 aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21] D CI104_09905 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] D CI104_03730 L(+)-tartrate dehydratase subunit alpha K03779 ttdA; L(+)-tartrate dehydratase alpha subunit [EC:4.2.1.32] D CI104_03725 L(+)-tartrate dehydratase subunit beta K03780 ttdB; L(+)-tartrate dehydratase beta subunit [EC:4.2.1.32] D CI104_15055 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D CI104_10025 2-dehydro-3-deoxyphosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CI104_15310 keto-deoxy-phosphogluconate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42] D CI104_24385 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CI104_24390 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CI104_24395 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CI104_24400 formate dehydrogenase cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma D CI104_14330 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:cfar00640] D CI104_23215 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CI104_05905 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D CI104_17590 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CI104_03160 propionate kinase K00932 tdcD; propionate kinase [EC:2.7.2.15] D CI104_16280 acetate kinase K19697 pduW; propionate kinase [EC:2.7.2.15] D CI104_17595 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CI104_16230 propanediol utilization protein K13923 pduL; phosphate propanoyltransferase [EC:2.3.1.222] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_09005 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CI104_03165 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CI104_02445 oxidoreductase K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CI104_05375 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CI104_02425 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CI104_02420 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CI104_17725 accD; acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CI104_01420 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CI104_19500 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CI104_07920 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CI104_07925 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CI104_05895 2-methylcitrate synthase K01659 prpC; 2-methylcitrate synthase [EC:2.3.3.5] D CI104_05900 bifunctional 2-methylcitrate dehydratase/aconitate hydratase K01720 prpD; 2-methylcitrate dehydratase [EC:4.2.1.79] D CI104_05035 acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CI104_19375 acnB; aconitate hydratase B K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D CI104_05890 methylisocitrate lyase K03417 prpB; methylisocitrate lyase [EC:4.1.3.30] D CI104_09280 mgsA; methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3] D CI104_03940 NADH-dependent alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] D CI104_11675 aldo/keto reductase K18471 ydjG; methylglyoxal reductase [EC:1.1.1.-] D CI104_01590 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CI104_24025 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CI104_09905 lactaldehyde reductase K00048 fucO; lactaldehyde reductase [EC:1.1.1.77] D CI104_16195 pduC; propanediol dehydratase K01699 pduC; propanediol dehydratase large subunit [EC:4.2.1.28] D CI104_16200 pduD; propanediol dehydratase K13919 pduD; propanediol dehydratase medium subunit [EC:4.2.1.28] D CI104_16205 pduE; propanediol dehydratase small subunit PduE K13920 pduE; propanediol dehydratase small subunit [EC:4.2.1.28] D CI104_16255 propanediol utilization protein K13921 pduQ; 1-propanol dehydrogenase D CI104_16250 aldehyde dehydrogenase EutE K13922 pduP; propionaldehyde dehydrogenase [EC:1.2.1.87] C 00650 Butanoate metabolism [PATH:cfar00650] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CI104_01625 acetyl-CoA--acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CI104_17255 acetyl-CoA--acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CI104_01620 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CI104_17260 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CI104_12055 acetate CoA-transferase YdiF K19709 ydiF; acetate CoA-transferase [EC:2.8.3.8] D CI104_14295 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CI104_15055 tartrate dehydrogenase K07246 ttuC; tartrate dehydrogenase/decarboxylase / D-malate dehydrogenase [EC:1.1.1.93 4.1.1.73 1.1.1.83] D CI104_07900 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CI104_07905 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CI104_07890 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CI104_07895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CI104_22615 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CI104_22620 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CI104_22625 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CI104_22630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CI104_01420 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CI104_19500 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CI104_19495 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_02520 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_12900 succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D CI104_24475 sulfolactaldehyde 3-reductase K08318 yihU; 4-hydroxybutyrate dehydrogenase / sulfolactaldehyde 3-reductase [EC:1.1.1.61 1.1.1.373] D CI104_09005 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CI104_03165 pflB; formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D CI104_13725 nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D CI104_21640 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D CI104_04840 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_25015 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_00165 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_04845 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CI104_00170 ilvN; acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CI104_25010 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CI104_07225 SDR family oxidoreductase K03366 butA; meso-butanediol dehydrogenase / (S,S)-butanediol dehydrogenase / diacetyl reductase [EC:1.1.1.- 1.1.1.76 1.1.1.304] C 00660 C5-Branched dibasic acid metabolism [PATH:cfar00660] D CI104_04840 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_25015 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_00165 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_04845 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CI104_00170 ilvN; acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CI104_25010 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CI104_07920 ADP-forming succinate--CoA ligase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CI104_07925 succinate--CoA ligase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CI104_08015 methylaspartate ammonia-lyase K04835 mal; methylaspartate ammonia-lyase [EC:4.3.1.2] D CI104_08020 methylaspartate mutase subunit E K19268 glmE; methylaspartate mutase epsilon subunit [EC:5.4.99.1] D CI104_08030 methylaspartate mutase subunit S K01846 glmS; methylaspartate mutase sigma subunit [EC:5.4.99.1] D CI104_04820 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CI104_04815 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CI104_04825 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:cfar00562] D CI104_18635 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CI104_24165 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:cfar00190] D CI104_17550 NADH-quinone oxidoreductase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D CI104_17545 NADH-quinone oxidoreductase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D CI104_17540 NADH-quinone oxidoreductase subunit NuoC/D K13378 nuoCD; NADH-quinone oxidoreductase subunit C/D [EC:7.1.1.2] D CI104_17535 NADH-quinone oxidoreductase subunit NuoE K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D CI104_17530 NADH-quinone oxidoreductase subunit NuoF K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D CI104_17525 NADH-quinone oxidoreductase subunit NuoG K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D CI104_17520 NADH-quinone oxidoreductase subunit NuoH K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D CI104_17515 NADH-quinone oxidoreductase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D CI104_17510 NADH-quinone oxidoreductase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D CI104_17505 NADH-quinone oxidoreductase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D CI104_17500 NADH-quinone oxidoreductase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D CI104_17495 NADH-quinone oxidoreductase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D CI104_17490 NADH-quinone oxidoreductase subunit NuoN K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D CI104_26370 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CI104_10615 NAD(P)/FAD-dependent oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9] D CI104_07900 succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CI104_07905 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CI104_07890 sdhC; succinate dehydrogenase cytochrome b556 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CI104_07895 sdhD; succinate dehydrogenase, hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit D CI104_22615 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CI104_22620 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CI104_22625 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CI104_22630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CI104_14495 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CI104_14505 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D CI104_14500 cytochrome b K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit D CI104_06370 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CI104_06375 cytochrome bo(3) ubiquinol oxidase subunit 4 K02300 cyoD; cytochrome o ubiquinol oxidase subunit IV D CI104_06380 cytochrome o ubiquinol oxidase subunit III K02299 cyoC; cytochrome o ubiquinol oxidase subunit III D CI104_06385 cytochrome ubiquinol oxidase subunit I K02298 cyoB; cytochrome o ubiquinol oxidase subunit I [EC:7.1.1.3] D CI104_06390 cytochrome ubiquinol oxidase subunit II K02297 cyoA; cytochrome o ubiquinol oxidase subunit II [EC:7.1.1.3] D CI104_13430 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CI104_08035 cytochrome bd-I ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CI104_13435 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CI104_26340 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CI104_08040 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CI104_08045 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D CI104_25175 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CI104_25185 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CI104_25180 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CI104_25170 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CI104_25190 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CI104_25155 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CI104_25165 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CI104_25160 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CI104_22280 inorganic diphosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D CI104_13560 manganese-dependent inorganic pyrophosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1] D CI104_18480 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:cfar00680] D CI104_13580 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_26390 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_27435 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_25785 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_26375 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D CI104_16900 fghA; S-formylglutathione hydrolase K01070 frmB; S-formylglutathione hydrolase [EC:3.1.2.12] D CI104_24385 sulfate ABC transporter substrate-binding protein K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CI104_24390 fdnG; formate dehydrogenase-N subunit alpha K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D CI104_24395 fdxH; formate dehydrogenase subunit beta K00124 fdoH; formate dehydrogenase iron-sulfur subunit D CI104_24400 formate dehydrogenase cytochrome b556 subunit K00127 fdoI; formate dehydrogenase subunit gamma D CI104_23140 formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D CI104_11530 formate dehydrogenase subunit alpha K22015 fdhF; formate dehydrogenase (hydrogenase) [EC:1.17.98.4 1.17.98.-] D CI104_18715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CI104_20035 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CI104_23975 phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D CI104_02540 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CI104_16645 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CI104_06185 fba; fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_04345 class II fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_24350 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_09865 ketose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D CI104_22230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CI104_24145 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CI104_04295 glpX; fructose-bisphosphatase class II K02446 glpX; fructose-1,6-bisphosphatase II [EC:3.1.3.11] D CI104_24210 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_24365 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_11910 6-phosphofructokinase II K16370 pfkB; 6-phosphofructokinase 2 [EC:2.7.1.11] D CI104_22035 cytochrome C K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY D CI104_22030 trimethylamine-N-oxide reductase TorA K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D CI104_17590 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D CI104_17595 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CI104_23215 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CI104_12015 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D CI104_08160 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CI104_04415 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CI104_00640 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CI104_21120 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CI104_09025 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CI104_21150 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 00910 Nitrogen metabolism [PATH:cfar00910] D CI104_14365 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CI104_13220 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CI104_13225 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CI104_14360 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CI104_13230 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CI104_14355 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CI104_13240 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CI104_14345 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CI104_17170 nitrate reductase catalytic subunit NapA K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D CI104_17155 napB; nitrate reductase K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D CI104_01870 nitrite reductase large subunit K00362 nirB; nitrite reductase (NADH) large subunit [EC:1.7.1.15] D CI104_01865 nirD; nitrite reductase small subunit NirD K00363 nirD; nitrite reductase (NADH) small subunit [EC:1.7.1.15] D CI104_23190 nrfA; ammonia-forming cytochrome c nitrite reductase K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2] D CI104_08810 hydroxylamine reductase K05601 hcp; hydroxylamine reductase [EC:1.7.99.1] D CI104_11725 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CI104_24530 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CI104_02635 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CI104_02630 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CI104_17920 cynS; cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104] D CI104_22050 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_20535 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_20925 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_04350 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_17915 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D CI104_05120 carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D CI104_02360 carbonic anhydrase K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:cfar00920] D CI104_18185 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D CI104_24205 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D CI104_18180 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D CI104_18175 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D CI104_18170 sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D CI104_05975 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CI104_20835 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CI104_05985 taurine transporter subunit K15552 tauC; taurine transport system permease protein D CI104_20830 ABC transporter permease K15552 tauC; taurine transport system permease protein D CI104_05980 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CI104_05990 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D CI104_09180 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CI104_09170 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D CI104_09165 aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CI104_09175 ssuD; alkanesulfonate monooxygenase, FMNH(2)-dependent K04091 ssuD; alkanesulfonate monooxygenase [EC:1.14.14.5 1.14.14.34] D CI104_09185 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CI104_19970 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CI104_19975 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CI104_19965 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D CI104_22355 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CI104_19990 cysH; phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D CI104_20000 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] D CI104_19995 cysI; NADPH-dependent assimilatory sulfite reductase hemoprotein subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D CI104_12205 tetrathionate reductase subunit TtrA K08357 ttrA; tetrathionate reductase subunit A D CI104_12215 tetrathionate reductase subunit TtrB K08358 ttrB; tetrathionate reductase subunit B D CI104_12210 tetrathionate reductase subunit TtrC K08359 ttrC; tetrathionate reductase subunit C D CI104_12255 thiosulfate reductase cytochrome B subunit K08354 phsC; thiosulfate reductase cytochrome b subunit D CI104_18575 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CI104_01600 thiosulfate sulfurtransferase GlpE K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D CI104_00670 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CI104_06470 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CI104_18120 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CI104_23625 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D CI104_24060 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CI104_08940 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D CI104_22940 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D CI104_08945 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D CI104_22935 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D CI104_12715 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D CI104_08950 dimethyl sulfoxide reductase anchor subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C D CI104_22930 dimethyl sulfoxide reductase K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:cfar00061] D CI104_05375 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CI104_02425 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CI104_02420 accC; acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CI104_17725 accD; acetyl-CoA carboxylase carboxyltransferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CI104_01320 acyl carrier protein K02078 acpP; acyl carrier protein D CI104_01325 acyl carrier protein K02078 acpP; acyl carrier protein D CI104_22830 acyl carrier protein K02078 acpP; acyl carrier protein D CI104_10540 acyl carrier protein K02078 acpP; acyl carrier protein D CI104_09965 acyl carrier protein K02078 acpP; acyl carrier protein D CI104_10530 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CI104_10525 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CI104_01275 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CI104_17780 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CI104_01260 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CI104_22840 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CI104_10545 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CI104_01265 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_22825 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_10535 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_20765 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_09235 beta-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D CI104_05350 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CI104_14025 enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CI104_15065 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:cfar00071] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_24655 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CI104_17835 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CI104_05710 fadE; acyl-CoA dehydrogenase K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D CI104_15065 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CI104_20400 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D CI104_13580 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_26390 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_27435 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_25785 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_14295 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CI104_09930 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CI104_26350 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_00750 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:cfar00561] D CI104_03135 glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CI104_20065 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CI104_14575 dihydroxyacetone kinase subunit DhaK K05878 dhaK; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaK [EC:2.7.1.121] D CI104_14580 dhaL; dihydroxyacetone kinase subunit L K05879 dhaL; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaL [EC:2.7.1.121] D CI104_14585 dihydroxyacetone kinase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CI104_01590 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CI104_24025 gldA; glycerol dehydrogenase K00005 gldA; glycerol dehydrogenase [EC:1.1.1.6] D CI104_24140 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CI104_07250 carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CI104_23390 glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CI104_10520 phosphate acetyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CI104_03740 glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CI104_03915 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CI104_23385 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CI104_22985 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00564 Glycerophospholipid metabolism [PATH:cfar00564] D CI104_00665 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CI104_01595 glycerol-3-phosphate dehydrogenase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CI104_17340 anaerobic glycerol-3-phosphate dehydrogenase subunit A K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D CI104_17345 glycerol-3-phosphate dehydrogenase subunit GlpB K00112 glpB; glycerol-3-phosphate dehydrogenase subunit B [EC:1.1.5.3] D CI104_17350 glpC; anaerobic glycerol-3-phosphate dehydrogenase subunit C K00113 glpC; glycerol-3-phosphate dehydrogenase subunit C D CI104_23390 glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CI104_03740 glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CI104_03915 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CI104_23385 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D CI104_24765 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D CI104_24745 lysophospholipase K01048 pldB; lysophospholipase [EC:3.1.1.5] D CI104_01490 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CI104_17330 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D CI104_20400 acyl-[ACP]--phospholipid O-acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D CI104_18250 eutA; ethanolamine ammonia-lyase reactivating factor EutA K04019 eutA; ethanolamine utilization protein EutA D CI104_18245 ethanolamine ammonia lyase large subunit K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7] D CI104_18240 ethanolamine ammonia lyase small subunit K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7] D CI104_24200 CDP-diacylglycerol diphosphatase K01521 cdh; CDP-diacylglycerol pyrophosphatase [EC:3.6.1.26] D CI104_05325 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CI104_18905 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CI104_22595 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CI104_15745 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CI104_06290 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D CI104_14080 phosphatidylglycerophosphatase B K01096 pgpB; phosphatidylglycerophosphatase B [EC:3.1.3.27 3.6.1.75 3.1.3.4 3.6.1.27] D CI104_18770 acid phosphatase AphA K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27] D CI104_08340 cardiolipin synthase ClsB K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D CI104_14245 cls; cardiolipin synthase A K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D CI104_10280 phospholipase D family protein K06132 clsC; cardiolipin synthase C [EC:2.7.8.-] C 00565 Ether lipid metabolism [PATH:cfar00565] D CI104_24765 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00600 Sphingolipid metabolism [PATH:cfar00600] D CI104_05920 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] D CI104_22985 alpha-glucosidase/alpha-galactosidase K07406 melA; alpha-galactosidase [EC:3.2.1.22] C 00590 Arachidonic acid metabolism D CI104_24765 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D CI104_24765 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:cfar00592] D CI104_24765 phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D CI104_24655 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CI104_17835 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:cfar01040] D CI104_06940 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D CI104_06500 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CI104_14225 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:cfar00230] D CI104_03835 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CI104_01755 ADP compounds hydrolase NudE K08312 nudE; ADP compounds hydrolase [EC:3.6.1.-] D CI104_21170 deoB; phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7] D CI104_07770 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CI104_14460 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D CI104_17705 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CI104_23660 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D CI104_18475 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CI104_15305 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D CI104_18750 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D CI104_18470 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D CI104_06965 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D CI104_06970 purE; 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D CI104_18390 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D CI104_10985 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CI104_23655 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CI104_06615 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CI104_06680 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CI104_19935 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CI104_07680 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CI104_01745 GMP/IMP nucleotidase K20881 yrfG; GMP/IMP 5'-nucleotidase [EC:3.1.3.-] D CI104_06665 inosine/guanosine kinase K00892 gsk; inosine kinase [EC:2.7.1.73] D CI104_18080 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D CI104_21165 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CI104_06105 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D CI104_18945 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CI104_05115 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D CI104_18505 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CI104_18560 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CI104_04410 non-canonical purine NTP phosphatase K01529 yjjX; inosine/xanthosine triphosphatase [EC:3.6.1.73] D CI104_04180 non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CI104_05760 xanthine phosphoribosyltransferase K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22] D CI104_20885 xanthine dehydrogenase molybdenum-binding subunit XdhA K00087 ygeS; xanthine dehydrogenase molybdenum-binding subunit [EC:1.17.1.4] D CI104_20890 xanthine dehydrogenase FAD-binding subunit XdhB K13479 ygeT; xanthine dehydrogenase FAD-binding subunit [EC:1.17.1.4] D CI104_20895 xanthine dehydrogenase K13480 ygeU; xanthine dehydrogenase iron-sulfur-binding subunit D CI104_18500 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CI104_18160 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CI104_04965 guanosine monophosphate reductase K00364 guaC; GMP reductase [EC:1.7.1.7] D CI104_20970 guaD; guanine deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D CI104_17925 nucleoside deaminase K01487 guaD; guanine deaminase [EC:3.5.4.3] D CI104_00465 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CI104_19575 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CI104_17310 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CI104_19580 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CI104_17315 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CI104_22135 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CI104_05250 dGTPase K01129 dgt; dGTPase [EC:3.1.5.1] D CI104_17565 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D CI104_20605 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D CI104_00455 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CI104_24950 guanosine-5'-triphosphate,3'-diphosphate diphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CI104_18485 exopolyphosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D CI104_20050 GTP diphosphokinase K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D CI104_24820 adenylate cyclase K05851 cyaA; adenylate cyclase, class 1 [EC:4.6.1.1] D CI104_22510 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CI104_12545 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4] D CI104_16015 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CI104_20115 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D CI104_00215 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2] D CI104_22360 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CI104_06645 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CI104_20045 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CI104_03845 phosphodiesterase K03651 cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53] D CI104_04710 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D CI104_19965 cysC; adenylyl-sulfate kinase K00860 cysC; adenylylsulfate kinase [EC:2.7.1.25] D CI104_19970 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CI104_19975 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CI104_03700 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CI104_03705 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CI104_03710 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D CI104_22050 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_20535 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_20925 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_04350 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] C 00240 Pyrimidine metabolism [PATH:cfar00240] D CI104_16415 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CI104_04620 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CI104_04615 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CI104_22085 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CI104_22090 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CI104_22160 amidohydrolase/deacetylase family metallohydrolase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CI104_10365 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D CI104_09190 quinone-dependent dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D CI104_00495 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D CI104_14065 pyrF; orotidine-5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D CI104_05305 UMP kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CI104_18560 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CI104_20045 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CI104_02480 septum formation inhibitor Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CI104_03285 M48 family peptidase K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D CI104_20040 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CI104_09040 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CI104_11735 NTP pyrophosphohydrolase K08320 nudG; (d)CTP diphosphatase [EC:3.6.1.65] D CI104_16585 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48] D CI104_06680 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CI104_19935 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CI104_07680 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CI104_21220 noncanonical pyrimidine nucleotidase, YjjG family K08723 yjjG; pyrimidine 5'-nucleotidase [EC:3.1.3.-] D CI104_24715 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D CI104_24965 uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3] D CI104_06105 hypothetical protein K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D CI104_18460 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9] D CI104_22360 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] D CI104_16950 pseudouridine kinase K16328 psuK; pseudouridine kinase [EC:2.7.1.83] D CI104_16945 pseudouridine-5'-phosphate glycosidase K16329 psuG; pseudouridylate synthase [EC:4.2.1.70] D CI104_07580 pyrimidine-specific ribonucleoside hydrolase RihA K01250 rihA; pyrimidine-specific ribonucleoside hydrolase [EC:3.2.2.-] D CI104_04565 ribonucleoside hydrolase RihC K12700 rihC; non-specific riboncleoside hydrolase [EC:3.2.2.-] D CI104_20115 LOG family protein K06966 ppnN; pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-] D CI104_16845 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5] D CI104_22135 anaerobic ribonucleoside triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6] D CI104_16580 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CI104_19575 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CI104_17310 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CI104_19580 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CI104_17315 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CI104_17565 5'-deoxynucleotidase K08722 yfbR; 5'-deoxynucleotidase [EC:3.1.3.89] D CI104_20605 hypothetical protein K06952 yfdR; 5'-nucleotidase [EC:3.1.3.89] D CI104_10560 dTMP kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CI104_00505 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CI104_21175 deoA; thymidine phosphorylase K00758 deoA; thymidine phosphorylase [EC:2.4.2.4] D CI104_14300 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21] D CI104_20350 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CI104_20920 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CI104_12790 NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:cfar00250] D CI104_09135 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CI104_18855 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CI104_20750 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CI104_20840 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13] D CI104_11695 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CI104_04170 L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CI104_08570 beta-aspartyl-peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CI104_25125 asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D CI104_07670 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CI104_05705 amidohydrolase K13566 NIT2; omega-amidase [EC:3.5.1.3] D CI104_17560 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CI104_20685 aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CI104_22705 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D CI104_02875 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CI104_23955 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CI104_22510 purA; adenylosuccinate synthase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D CI104_10985 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D CI104_22085 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D CI104_22090 aspartate carbamoyltransferase regulatory subunit K00610 pyrI; aspartate carbamoyltransferase regulatory subunit D CI104_01420 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CI104_19500 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CI104_19495 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_02520 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_12900 succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] D CI104_02635 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CI104_02630 glutamate synthase small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D CI104_11725 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CI104_10175 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CI104_24530 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CI104_16415 carbamoyl phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CI104_04620 carB; carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D CI104_04615 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D CI104_07995 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CI104_12910 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CI104_25200 glmS; glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CI104_17705 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:cfar00260] D CI104_23470 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CI104_04465 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CI104_24055 metL; bifunctional aspartokinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D CI104_01540 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CI104_04470 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39] D CI104_04475 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D CI104_08790 low-specificity L-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48] D CI104_18715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CI104_10215 glyoxylate/hydroxypyruvate reductase A K12972 ghrA; glyoxylate/hydroxypyruvate reductase [EC:1.1.1.79 1.1.1.81] D CI104_00895 D-glycerate dehydrogenase K00090 ghrB; glyoxylate/hydroxypyruvate/2-ketogluconate reductase [EC:1.1.1.79 1.1.1.81 1.1.1.215] D CI104_03135 glycerate 2-kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CI104_20065 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165] D CI104_08160 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CI104_04415 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CI104_00640 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D CI104_21120 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CI104_09025 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CI104_21150 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D CI104_12790 NAD(P)-dependent oxidoreductase K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-] D CI104_00615 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CI104_00620 L-threonine 3-dehydrogenase K00060 tdh; threonine 3-dehydrogenase [EC:1.1.1.103] D CI104_21065 aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CI104_21075 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_21070 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CI104_18905 pssA; phosphatidylserine synthase K00998 pssA; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CI104_07185 betA; choline dehydrogenase K00108 betA; choline dehydrogenase [EC:1.1.99.1] D CI104_07190 betaine-aldehyde dehydrogenase K00130 betB; betaine-aldehyde dehydrogenase [EC:1.2.1.8] D CI104_20125 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CI104_03170 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CI104_15105 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CI104_03150 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CI104_24995 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CI104_00120 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D CI104_20435 aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D CI104_21815 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CI104_09840 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CI104_14190 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CI104_21810 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CI104_09835 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CI104_14185 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:cfar00270] D CI104_00670 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D CI104_06470 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D CI104_18120 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47] D CI104_03960 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CI104_21535 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CI104_12550 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CI104_23600 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CI104_24725 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CI104_04240 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CI104_05070 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CI104_05075 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D CI104_20670 acyl homoserine lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184] D CI104_05245 mtnN; 5'-methylthioadenosine/adenosylhomocysteine nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9] D CI104_04090 S-methyl-5-thioribose kinase K00899 mtnK; 5-methylthioribose kinase [EC:2.7.1.100] D CI104_18945 laccase domain-containing protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CI104_04085 mtnA; S-methyl-5-thioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D CI104_23330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CI104_15220 Free methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14] D CI104_15955 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_26260 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_27945 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_11075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_19635 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CI104_23470 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CI104_04465 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CI104_24055 metL; bifunctional aspartokinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D CI104_01540 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CI104_23625 homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31] D CI104_24060 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CI104_25005 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CI104_19640 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CI104_04215 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CI104_09135 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CI104_18575 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CI104_20435 aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D CI104_15780 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D CI104_02540 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CI104_20845 D-cysteine desulfhydrase K17950 cuyA; L-cysteate sulfo-lyase [EC:4.4.1.25] D CI104_20125 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CI104_03170 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CI104_15105 L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17] D CI104_18165 cysteine synthase CysM K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D CI104_21120 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CI104_09025 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:cfar00280] D CI104_25005 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CI104_24655 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CI104_17835 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CI104_19500 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CI104_21640 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cfar00290] D CI104_03150 bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CI104_24995 ilvA; threonine ammonia-lyase, biosynthetic K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D CI104_04820 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D CI104_04815 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D CI104_04825 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D CI104_04840 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_25015 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_00165 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_04845 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CI104_00170 ilvN; acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CI104_25010 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CI104_24980 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CI104_01580 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CI104_25000 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CI104_21490 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CI104_25005 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CI104_00795 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D CI104_17560 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CI104_04830 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:cfar00300] D CI104_23470 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CI104_04465 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CI104_24055 metL; bifunctional aspartokinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D CI104_01540 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CI104_18400 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CI104_04610 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CI104_05270 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D CI104_01900 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CI104_18365 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CI104_24805 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CI104_20425 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CI104_04875 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CI104_04880 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:cfar00310] D CI104_07915 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20435 aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D CI104_05380 lysine decarboxylase LdcC K01582 E4.1.1.18; lysine decarboxylase [EC:4.1.1.18] D CI104_03360 ygjG; putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D CI104_13390 patD; aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D CI104_19500 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CI104_19495 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_02520 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_19485 carbon starvation induced protein K15737 csiD; glutarate dioxygenase [EC:1.14.11.64] D CI104_19490 hydroxyglutarate oxidase K15736 lhgO; (S)-2-hydroxyglutarate dehydrogenase [EC:1.1.5.13] D CI104_13545 DUF1338 domain-containing protein K25986 ydcJ; 2-oxoadipate dioxygenase/decarboxylase [EC:1.13.11.93] D CI104_12105 FAD-binding oxidoreductase K26063 ydiJ; (R)-2-hydroxyglutarate dehydrogenase [EC:1.1.-.-] D CI104_07945 3-keto-5-aminohexanoate cleavage protein K18013 kce; 3-keto-5-aminohexanoate cleavage enzyme [EC:2.3.1.247] D CI104_01625 acetyl-CoA--acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CI104_17255 acetyl-CoA--acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CI104_01620 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CI104_17260 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CI104_21370 oxidoreductase K13609 dpkA; delta1-piperideine-2-carboxylate reductase [EC:1.5.1.21] C 00220 Arginine biosynthesis [PATH:cfar00220] D CI104_22025 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CI104_22055 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D CI104_02875 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CI104_23955 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CI104_03700 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CI104_03705 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CI104_03710 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] D CI104_22045 arcA; arginine deiminase K01478 arcA; arginine deiminase [EC:3.5.3.6] D CI104_07995 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CI104_12910 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CI104_24530 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CI104_11725 NADP-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4] D CI104_22050 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_20535 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_20925 arcC; carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_04350 carbamate kinase K00926 arcC; carbamate kinase [EC:2.7.2.2] D CI104_09135 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CI104_17560 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CI104_20305 amino-acid N-acetyltransferase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D CI104_23960 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D CI104_23965 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D CI104_01900 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CI104_23970 acetylornithine deacetylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16] C 00330 Arginine and proline metabolism [PATH:cfar00330] D CI104_22995 arginine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D CI104_04260 biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19] D CI104_04265 speB; agmatinase K01480 speB; agmatinase [EC:3.5.3.11] D CI104_07780 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D CI104_04125 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D CI104_05075 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D CI104_05070 adenosylmethionine decarboxylase K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50] D CI104_03360 ygjG; putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D CI104_13390 patD; aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D CI104_12740 spermidine acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57] D CI104_11785 arginine N-succinyltransferase K00673 astA; arginine N-succinyltransferase [EC:2.3.1.109] D CI104_11795 astB; N-succinylarginine dihydrolase K01484 astB; succinylarginine dihydrolase [EC:3.5.3.23] D CI104_11780 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D CI104_11790 astD; succinylglutamate-semialdehyde dehydrogenase K06447 astD; succinylglutamic semialdehyde dehydrogenase [EC:1.2.1.71] D CI104_11800 astE; succinylglutamate desuccinylase K05526 astE; succinylglutamate desuccinylase [EC:3.5.1.96] D CI104_06080 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D CI104_10175 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CI104_05780 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CI104_05785 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D CI104_09135 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism [PATH:cfar00340] D CI104_16345 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D CI104_16380 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31] D CI104_16370 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D CI104_16365 hisH; imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D CI104_16375 hisF; imidazole glycerol phosphate synthase cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D CI104_16360 bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15] D CI104_16355 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CI104_16350 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] D CI104_08255 hutH; histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3] D CI104_08250 hutU; urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49] D CI104_08235 imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7] D CI104_08240 formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8] C 00350 Tyrosine metabolism [PATH:cfar00350] D CI104_09135 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CI104_16355 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CI104_23330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CI104_16810 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] D CI104_13580 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_26390 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_27435 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_25785 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_14295 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] D CI104_09930 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CI104_26350 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_00750 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_19495 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_02520 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_16820 gtdA; gentisate 1,2-dioxygenase K00450 E1.13.11.4; gentisate 1,2-dioxygenase [EC:1.13.11.4] D CI104_16815 FAA hydrolase family protein K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:cfar00360] D CI104_09135 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CI104_16355 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CI104_23330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CI104_01505 N-acetyltransferase K03825 aaaT; L-phenylalanine/L-methionine N-acetyltransferase [EC:2.3.1.53 2.3.1.-] D CI104_14630 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D CI104_24035 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00380 Tryptophan metabolism [PATH:cfar00380] D CI104_07915 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_25255 tnaA; tryptophanase K01667 tnaA; tryptophanase [EC:4.1.99.1] D CI104_17990 indolepyruvate decarboxylase K04103 ipdC; indolepyruvate decarboxylase [EC:4.1.1.74] D CI104_11865 catalase K03781 katE; catalase [EC:1.11.1.6] D CI104_24035 katG; catalase/peroxidase HPI K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cfar00400] D CI104_12005 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CI104_18980 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CI104_08145 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CI104_01795 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CI104_12060 type I 3-dehydroquinate dehydratase K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10] D CI104_02240 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D CI104_12065 quinate/shikimate dehydrogenase K05887 ydiB; quinate/shikimate dehydrogenase [EC:1.1.1.282] D CI104_06090 shikimate kinase AroL K00891 aroK; shikimate kinase [EC:2.7.1.71] D CI104_01790 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CI104_09030 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CI104_17810 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CI104_14170 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CI104_14175 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18] D CI104_14180 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase K13498 trpCF; indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase [EC:4.1.1.48 5.3.1.24] D CI104_21815 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CI104_09840 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CI104_14190 tryptophan synthase subunit alpha K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CI104_21810 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CI104_09835 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CI104_14185 trpB; tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CI104_18975 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D CI104_18970 bifunctional chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D CI104_09135 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CI104_16355 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CI104_23330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:cfar00410] D CI104_05145 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D CI104_01420 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CI104_19500 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CI104_13390 patD; aminobutyraldehyde dehydrogenase K00137 prr; aminobutyraldehyde dehydrogenase [EC:1.2.1.19] D CI104_05150 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CI104_20920 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00430 Taurine and hypotaurine metabolism [PATH:cfar00430] D CI104_01500 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CI104_05990 taurine dioxygenase K03119 tauD; taurine dioxygenase [EC:1.14.11.17] D CI104_17595 phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8] D CI104_17590 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism [PATH:cfar00440] D CI104_23125 aminoalkylphosphonate N-acetyltransferase K09994 phnO; (aminoalkyl)phosphonate N-acetyltransferase [EC:2.3.1.280] D CI104_23095 carbon-phosphorus lyase complex subunit PhnI K06164 phnI; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI [EC:2.7.8.37] D CI104_23085 phnG; phosphonate C-P lyase system protein PhnG K06166 phnG; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnG [EC:2.7.8.37] D CI104_23090 carbon-phosphorus lyase subunit PhnH K06165 phnH; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnH [EC:2.7.8.37] D CI104_23110 phnL; phosphonate C-P lyase system protein PhnL K05780 phnL; alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnL [EC:2.7.8.37] D CI104_23115 alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase K06162 phnM; alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [EC:3.6.1.63] D CI104_23100 carbon-phosphorus lyase complex subunit PhnJ K06163 phnJ; alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase [EC:4.7.1.1] D CI104_23130 phosphonate metabolism protein PhnP K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:cfar00450] D CI104_24060 cystathionine gamma-synthase K01739 metB; cystathionine gamma-synthase [EC:2.5.1.48] D CI104_03960 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CI104_21535 cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CI104_12550 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CI104_23600 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CI104_24725 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] D CI104_12150 cysteine desulfurase SufS K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CI104_08905 thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CI104_12720 dimethyl sulfoxide reductase subunit A K07310 ynfF; Tat-targeted selenate reductase subunit YnfF [EC:1.97.1.9] D CI104_20945 putative selenate reductase subunit YgfK K12527 ygfK; putative selenate reductase [EC:1.97.1.9] D CI104_20960 molybdopterin-dependent oxidoreductase Mo/Fe-S-binding subunit K12528 xdhD; putative selenate reductase molybdopterin-binding subunit D CI104_20955 molybdopterin-dependent oxidoreductase FAD-binding subunit K12529 ygfM; putative selenate reductase FAD-binding subunit D CI104_19970 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CI104_19975 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CI104_11715 selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CI104_00740 L-selenocysteinyl-tRNA(Sec) synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CI104_22155 SelA-like pyridoxal phosphate-dependent enzyme K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CI104_16705 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:cfar00460] D CI104_16760 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] D CI104_01500 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CI104_11695 L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CI104_04170 L-asparaginase 2 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1] D CI104_08570 beta-aspartyl-peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CI104_25125 asparagine synthetase A K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1] D CI104_18715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:cfar00470] D CI104_14625 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CI104_23335 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CI104_04910 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CI104_06045 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CI104_20435 aspartate/glutamate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10] D CI104_07995 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CI104_12910 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CI104_23880 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CI104_04890 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CI104_13865 dipeptide epimerase K19802 ycjG; L-Ala-D/L-Glu epimerase / N-acetyl-D-glutamate racemase [EC:5.1.1.20 5.1.1.25] D CI104_20750 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CI104_20840 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13] D CI104_00120 dsdA; D-serine dehydratase K01753 dsdA; D-serine dehydratase [EC:4.3.1.18] D CI104_15780 D-cysteine desulfhydrase K05396 dcyD; D-cysteine desulfhydrase [EC:4.4.1.15] D CI104_24805 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CI104_20425 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D CI104_22060 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12] D CI104_14630 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:cfar00480] D CI104_01500 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CI104_14400 gamma-glutamylcyclotransferase K07232 CHAC; glutathione-specific gamma-glutamylcyclotransferase [EC:4.3.2.7] D CI104_07845 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9] D CI104_07835 hypothetical protein K23123 pxpB; 5-oxoprolinase (ATP-hydrolysing) subunit B [EC:3.5.2.9] D CI104_07840 hypothetical protein K23124 pxpC; 5-oxoprolinase (ATP-hydrolysing) subunit C [EC:3.5.2.9] D CI104_07175 glutamate--cysteine ligase K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D CI104_19640 gshA; glutamate--cysteine ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D CI104_04215 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D CI104_21985 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CI104_18445 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CI104_18585 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D CI104_09160 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CI104_05755 cytosol nonspecific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CI104_17645 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CI104_23270 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CI104_12480 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CI104_08615 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CI104_01155 glutathione-disulfide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7] D CI104_11010 isocitrate dehydrogenase (NADP(+)) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D CI104_16395 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CI104_15320 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CI104_11975 glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D CI104_07780 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D CI104_04125 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D CI104_05075 polyamine aminopropyltransferase K00797 speE; spermidine synthase [EC:2.5.1.16] D CI104_04065 bifunctional glutathionylspermidine amidase/synthase K01460 gsp; glutathionylspermidine amidase/synthetase [EC:3.5.1.78 6.3.1.8] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation [PATH:cfar00511] D CI104_05920 lacZ; beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23] C 00540 Lipopolysaccharide biosynthesis [PATH:cfar00540] D CI104_05355 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CI104_04930 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CI104_05345 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CI104_06980 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CI104_05360 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CI104_09065 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CI104_02720 arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CI104_14415 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CI104_02715 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CI104_09080 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CI104_00540 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CI104_10325 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CI104_15335 msbB; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D CI104_17000 phosphatase PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D CI104_23015 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D CI104_26315 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D CI104_00950 kdo(2)-lipid A phosphoethanolamine 7''-transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D CI104_07470 pagP; phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D CI104_17420 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D CI104_17940 lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D CI104_05715 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CI104_03780 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D CI104_05455 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CI104_00610 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CI104_00600 lipopolysaccharide heptosyltransferase RfaC K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D CI104_00605 ADP-heptose--LPS heptosyltransferase RfaF K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D CI104_00555 lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D CI104_23980 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D CI104_00545 lipopolysaccharide core heptosyltransferase RfaQ K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D CI104_00625 glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D CI104_00580 heptose kinase K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-] D CI104_00585 waaZ; 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ K12981 waaZ; KDO transferase III [EC:2.4.99.-] D CI104_00550 glycosyltransferase family 1 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D CI104_00565 glycosyl transferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] D CI104_00590 lipopolysaccharide 1,2-N-acetylglucosaminetransferase K03277 waaU; heptosyltransferase IV [EC:2.4.-.-] D CI104_00570 lipopolysaccharide 3-alpha-galactosyltransferase K03278 waaI; UDP-D-galactose:(glucosyl)LPS alpha-1,3-D-galactosyltransferase [EC:2.4.1.44] D CI104_00575 lipopolysaccharide 1,2-glucosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D CI104_00560 UDP-glucose--glucosyl LPS a 1,2-glucosyltransferase K24623 waaH; UDP-glucose:(glucosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.-] D CI104_00595 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] C 00542 O-Antigen repeat unit biosynthesis [PATH:cfar00542] D CI104_24925 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cfar00541] D CI104_14310 galU; UTP--glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_16460 galF; GalU regulator GalF K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D CI104_08185 galE; UDP-glucose 4-epimerase GalE K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D CI104_16390 UDP-glucose 6-dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D CI104_24900 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CI104_24905 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D CI104_24890 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] D CI104_24895 dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase K16704 rffC; dTDP-4-amino-4,6-dideoxy-D-galactose acyltransferase [EC:2.3.1.210] D CI104_12570 mannose-6-phosphate isomerase K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8] D CI104_03320 phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CI104_16490 phosphomannomutase CpsG K01840 manB; phosphomannomutase [EC:5.4.2.8] D CI104_16495 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13] D CI104_16515 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47] D CI104_16510 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271] D CI104_25195 glmU; bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CI104_24915 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CI104_24910 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CI104_16440 fnlA; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D CI104_16435 capsular biosynthesis protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367] D CI104_16430 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28] D CI104_16400 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] D CI104_22315 oxidoreductase K13020 wlbA; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335] C 00550 Peptidoglycan biosynthesis [PATH:cfar00550] D CI104_02760 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CI104_23850 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CI104_04905 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CI104_04890 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CI104_04875 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CI104_04910 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CI104_06045 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CI104_04880 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CI104_05320 (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CI104_03750 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CI104_08630 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CI104_04885 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CI104_04900 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CI104_02665 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CI104_01760 carboxypeptidase/penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CI104_05195 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D CI104_18565 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D CI104_07530 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CI104_04870 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CI104_15160 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CI104_07515 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CI104_16305 serine-type D-Ala-D-Ala carboxypeptidase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CI104_08620 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CI104_02795 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:cfar00552] D CI104_03750 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CI104_08630 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CI104_24925 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CI104_16400 polysaccharide biosynthesis protein K24300 wbpM; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:cfar00543] D CI104_16485 undecaprenyl-phosphate glucose phosphotransferase K03606 wcaJ; undecaprenyl-phosphate glucose phosphotransferase [EC:2.7.8.31] D CI104_16500 wcaI; colanic acid biosynthesis glycosyltransferase WcaI K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI D CI104_16520 wcaF; colanic acid biosynthesis acetyltransferase WcaF K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-] D CI104_16525 wcaE; colanic acid biosynthesis glycosyltransferase WcaE K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D CI104_16535 wcaC; colanic acid biosynthesis glycosyltransferase WcaC K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D CI104_16540 serine acetyltransferase K03819 wcaB; putative colanic acid biosynthesis acetyltransferase WcaB [EC:2.3.1.-] D CI104_16545 colanic acid biosynthesis glycosyltransferase WcaA K25875 wcaA; putative colanic acid biosynthesis glycosyltransferase WcaA D CI104_16470 wcaL; colanic acid biosynthesis glycosyltransferase WcaL K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] D CI104_16475 wcaK; colanic acid biosynthesis pyruvyl transferase WcaK K16710 wcaK; colanic acid/amylovoran biosynthesis protein WcaK/AmsJ D CI104_24925 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CI104_24870 lipopolysaccharide N-acetylmannosaminouronosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D CI104_24880 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D CI104_00670 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:cfar00730] D CI104_23715 phosphomethylpyrimidine synthase ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D CI104_16675 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D CI104_23725 molybdopterin-synthase adenylyltransferase MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] D CI104_18620 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CI104_06315 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CI104_23740 2-iminoacetate synthase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19] D CI104_06300 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CI104_23735 thiazole synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D CI104_16680 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CI104_23720 thiamine phosphate synthase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D CI104_06285 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D CI104_22590 small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CI104_06065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CI104_10600 thiamine kinase K07251 thiK; thiamine kinase [EC:2.7.1.89] D CI104_06645 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:cfar00740] D CI104_14085 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CI104_06270 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CI104_08640 Cof-type HAD-IIB family hydrolase K20861 ybjI; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D CI104_24790 flavin mononucleotide phosphatase K20862 yigB; FMN hydrolase / 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase [EC:3.1.3.102 3.1.3.104] D CI104_03795 ribB; 3,4-dihydroxy-2-butanone-4-phosphate synthase K02858 ribB; 3,4-dihydroxy 2-butanone 4-phosphate synthase [EC:4.1.99.12] D CI104_06275 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CI104_12335 riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CI104_04540 ribF; bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CI104_23325 aphA; class B acid phosphatase K03788 aphA; acid phosphatase (class B) [EC:3.1.3.2] D CI104_24660 NAD(P)H-flavin reductase K05368 fre; NAD(P)H-flavin reductase [EC:1.5.1.41] D CI104_09185 NAD(P)H-dependent FMN reductase K00299 ssuE; FMN reductase [EC:1.5.1.38] D CI104_16680 hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50] D CI104_03835 ADP-ribose diphosphatase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D CI104_11000 NUDIX hydrolase K12152 nudJ; phosphatase NudJ [EC:3.6.1.-] D CI104_17700 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CI104_19910 phenolic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:cfar00750] D CI104_12465 pdxH; pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5] D CI104_12475 pyridoxal kinase PdxY K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CI104_18150 pdxK; pyridoxine/pyridoxal/pyridoxamine kinase K00868 pdxK; pyridoxine kinase [EC:2.7.1.35] D CI104_13650 oxidoreductase K05275 E1.1.1.65; pyridoxine 4-dehydrogenase [EC:1.1.1.65] D CI104_04335 erythrose-4-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D CI104_17745 erythronate-4-phosphate dehydrogenase K03473 pdxB; erythronate-4-phosphate dehydrogenase [EC:1.1.1.290] D CI104_09025 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CI104_04725 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase PdxA K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D CI104_18800 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D CI104_04475 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:cfar00760] D CI104_18855 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D CI104_08125 quinolinate synthase NadA K03517 nadA; quinolinate synthase [EC:2.5.1.72] D CI104_04985 carboxylating nicotinate-nucleotide diphosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D CI104_09155 pncB; nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21] D CI104_18080 purine-nucleoside phosphorylase K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1] D CI104_21165 deoD; purine-nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1] D CI104_21140 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D CI104_06680 ushA; bifunctional UDP-sugar hydrolase/5'-nucleotidase K11751 ushA; 5'-nucleotidase / UDP-sugar diphosphatase [EC:3.1.3.5 3.6.1.45] D CI104_19935 5'/3'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CI104_07680 UMP phosphatase K02566 nagD; 5'-nucleotidase [EC:3.1.3.5] D CI104_07555 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D CI104_20045 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CI104_23705 nudC; NAD(+) diphosphatase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D CI104_11820 NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D CI104_19705 hypothetical protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D CI104_11690 nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-] D CI104_10935 NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D CI104_19060 ppnK; NAD(+) kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D CI104_23905 Si-specific NAD(P)(+) transhydrogenase K00322 sthA; NAD(P) transhydrogenase [EC:1.6.1.1] D CI104_12620 pntA; NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D CI104_12625 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit beta K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D CI104_19495 NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_02520 gabD; NAD-dependent succinate-semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D CI104_12900 succinate-semialdehyde dehydrogenase K08324 sad; succinate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.24] C 00770 Pantothenate and CoA biosynthesis [PATH:cfar00770] D CI104_04840 acetolactate synthase 3 large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_25015 acetolactate synthase 2 catalytic subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_00165 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D CI104_04845 acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CI104_00170 ilvN; acetolactate synthase isozyme 1 small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D CI104_25010 acetolactate synthase 2 small subunit K11258 ilvM; acetolactate synthase II small subunit [EC:2.2.1.6] D CI104_24980 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D CI104_01580 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CI104_25000 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CI104_21490 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D CI104_05155 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D CI104_06345 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D CI104_05150 pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D CI104_23840 type I pantothenate kinase K00867 coaA; type I pantothenate kinase [EC:2.7.1.33] D CI104_00510 coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D CI104_20045 nucleoside triphosphate pyrophosphohydrolase K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9] D CI104_00535 pantetheine-phosphate adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D CI104_04960 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CI104_18795 acpS; holo-ACP synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D CI104_01255 4'-phosphopantetheinyl transferase AcpT K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D CI104_06215 ACP phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14] D CI104_25005 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CI104_20920 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CI104_05145 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:cfar00780] D CI104_08280 malonyl-[acyl-carrier protein] O-methyltransferase BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D CI104_01275 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CI104_17780 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CI104_01260 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CI104_22840 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CI104_10545 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CI104_01265 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_22825 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_10535 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_20765 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_05350 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CI104_14025 enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CI104_01680 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D CI104_09970 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CI104_08275 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CI104_08265 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CI104_08285 ATP-dependent dethiobiotin synthetase BioD K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CI104_12680 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D CI104_08270 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D CI104_23845 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CI104_00925 molybdopterin guanine dinucleotide-containing S/N-oxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] C 00785 Lipoic acid metabolism [PATH:cfar00785] D CI104_07505 lipoyl(octanoyl) transferase LipB K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D CI104_07495 lipA; lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CI104_21160 lplA; lipoate--protein ligase K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_05010 aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D CI104_05015 aceF; pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CI104_07910 sucA; 2-oxoglutarate dehydrogenase subunit E1 K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CI104_07915 dihydrolipoyllysine-residue succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CI104_21065 aminomethyl-transferring glycine dehydrogenase K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D CI104_21075 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CI104_21070 gcvH; glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:cfar00790] D CI104_16890 GTP cyclohydrolase I FolE K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16] D CI104_06065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CI104_15380 NUDIX pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D CI104_03745 folB; bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CI104_05160 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D CI104_02820 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D CI104_19160 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_25635 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_25685 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_25715 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_26840 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_27365 folP; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15] D CI104_04705 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CI104_25730 trimethoprim-resistant dihydrofolate reductase DfrA19 K19644 dfrA19; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3] D CI104_17720 bifunctional tetrahydrofolate synthase/dihydrofolate synthase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CI104_14085 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CI104_01895 aminodeoxychorismate synthase component 2 K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85] D CI104_15095 pabB; aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85] D CI104_10550 aminodeoxychorismate lyase K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38] D CI104_17655 dihydroneopterin triphosphate 2'-epimerase K07589 folX; D-erythro-7,8-dihydroneopterin triphosphate epimerase [EC:5.1.99.7] D CI104_12605 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D CI104_21860 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CI104_20010 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CI104_20015 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CI104_06455 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CI104_20110 preQ(1) synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CI104_14985 MBL fold metallo-hydrolase K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105] D CI104_08305 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CI104_08315 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CI104_08325 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CI104_04495 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D CI104_08310 moaB; molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D CI104_08565 molybdopterin molybdenumtransferase MoeA K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D CI104_20940 mocA; molybdenum cofactor cytidylyltransferase K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D CI104_24595 mobA; molybdenum cofactor guanylyltransferase MobA K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:cfar00670] D CI104_04705 folA; type 3 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CI104_25730 trimethoprim-resistant dihydrofolate reductase DfrA19 K19644 dfrA19; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3] D CI104_12605 dihydromonapterin reductase K13938 folM; dihydromonapterin reductase / dihydrofolate reductase [EC:1.5.1.50 1.5.1.3] D CI104_07030 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CI104_18715 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CI104_18475 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D CI104_23655 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CI104_02210 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CI104_21075 gcvT; glycine cleavage system protein T K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D CI104_23600 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D CI104_20350 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D CI104_14330 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D CI104_24040 metF; methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D CI104_21115 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:cfar00860] D CI104_18040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CI104_14440 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CI104_05220 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CI104_06000 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CI104_24825 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CI104_24830 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CI104_23700 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CI104_18220 coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D CI104_24550 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D CI104_24630 hemG; menaquinone-dependent protoporphyrinogen IX dehydrogenase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3] D CI104_06655 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D CI104_24835 uroporphyrinogen-III C-methyltransferase K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CI104_01855 cobA; uroporphyrinogen-III C-methyltransferase K02302 cysG; uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase [EC:2.1.1.107 1.3.1.76 4.99.1.4] D CI104_07975 cobA; uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D CI104_06370 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CI104_16120 sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D CI104_16115 cobalt-factor II C(20)-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D CI104_16130 cobJ; precorrin-3B C(17)-methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D CI104_16140 cobM; cobalt-precorrin-4 methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D CI104_16135 cobalamin biosynthesis protein CbiG K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D CI104_16125 cobalt-precorrin-6A/precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106] D CI104_16155 cbiD; cobalt-precorrin-5B (C(1))-methyltransferase K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D CI104_16145 cbiT; decarboxylating cobalt-precorrin-6B (C(15))-methyltransferase K02191 cbiT; cobalt-precorrin-6B (C15)-methyltransferase [EC:2.1.1.196] D CI104_16150 cbiE; cobalt-precorrin-7 (C(5))-methyltransferase K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289] D CI104_16160 cbiC; cobalt-precorrin-8 methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D CI104_16170 cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D CI104_25460 ATP-binding protein K09882 cobS; cobaltochelatase CobS [EC:6.6.1.2] D CI104_07985 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CI104_14125 cobO; cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D CI104_16090 cobyric acid synthase K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D CI104_16165 cobalamin biosynthesis protein K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D CI104_16085 adenosylcobinamide kinase/adenosylcobinamide phosphate guanyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D CI104_16080 adenosylcobinamide-GDP ribazoletransferase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D CI104_16075 cobT; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D CI104_07545 adenosylcobalamin/alpha-ribazole phosphatase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D CI104_16285 GHMP kinase K16651 pduX; L-threonine kinase [EC:2.7.1.177] D CI104_07550 threonine-phosphate decarboxylase K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81] D CI104_18290 ethanolamine utilization cob(I)yrinic acid a,c-diamide adenosyltransferase EutT K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154] D CI104_27285 beta-glucuronidase K01195 uidA; beta-glucuronidase [EC:3.2.1.31] D CI104_02030 bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cfar00130] D CI104_23400 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D CI104_23395 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CI104_24665 4-hydroxy-3-polyprenylbenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D CI104_17700 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CI104_19910 phenolic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CI104_21080 2-octaprenylphenol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D CI104_17305 bifunctional 3-demethylubiquinone 3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D CI104_21085 2-octaprenyl-6-methoxyphenyl hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D CI104_24705 bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CI104_07630 ubiF; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K03184 ubiF; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D CI104_17465 isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D CI104_07330 isochorismate synthase EntC K02361 entC; isochorismate synthase [EC:5.4.4.2] D CI104_17460 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D CI104_17455 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K08680 menH; 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [EC:4.2.99.20] D CI104_17445 o-succinylbenzoate synthase K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D CI104_17440 2-succinylbenzoate-CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D CI104_17450 1,4-dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D CI104_12110 thioesterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D CI104_24115 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CI104_10155 wrbA; NAD(P)H:quinone oxidoreductase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D CI104_22370 NAD(P)-dependent oxidoreductase K19267 qorB; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:cfar00900] D CI104_06300 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CI104_05315 1-deoxy-D-xylulose-5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CI104_19950 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CI104_14450 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CI104_19945 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CI104_18545 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CI104_04560 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17700 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CI104_19910 phenolic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CI104_20990 isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2] D CI104_06305 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CI104_02770 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CI104_05320 (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation [PATH:cfar00903] D CI104_15685 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] C 00907 Pinene, camphor and geraniol degradation [PATH:cfar00907] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CI104_21935 NAD(P)-dependent alcohol dehydrogenase K12957 ahr; alcohol/geraniol dehydrogenase (NADP+) [EC:1.1.1.2 1.1.1.183] D CI104_21640 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D CI104_24655 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CI104_17835 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CI104_07260 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_07265 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_08975 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_08980 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_17605 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_17610 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_04275 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CI104_18330 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:cfar00523] D CI104_24900 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CI104_24905 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 01054 Nonribosomal peptide structures [PATH:cfar01054] D CI104_20750 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CI104_20840 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13] C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:cfar01053] D CI104_17465 isochorismate synthase MenF K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D CI104_07330 isochorismate synthase EntC K02361 entC; isochorismate synthase [EC:5.4.4.2] D CI104_07340 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D CI104_07345 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase K00216 entA; 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase [EC:1.3.1.28] D CI104_07270 enterobactin synthase subunit EntD K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D CI104_07335 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D CI104_07295 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D CI104_07350 proofreading thioesterase EntH K24147 entH; proofreading thioesterase EntH C 01055 Biosynthesis of vancomycin group antibiotics D CI104_24905 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids [PATH:cfar00946] D CI104_16760 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis D CI104_14705 SED family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] C 00332 Carbapenem biosynthesis [PATH:cfar00332] D CI104_05780 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D CI104_05785 proA; glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:cfar00261] D CI104_19970 sulfate adenylyltransferase subunit CysN K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D CI104_19975 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D CI104_23470 lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4] D CI104_04465 bifunctional aspartate kinase/homoserine dehydrogenase I K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3] D CI104_24055 metL; bifunctional aspartokinase II/homoserine dehydrogenase II K12525 metL; bifunctional aspartokinase / homoserine dehydrogenase 2 [EC:2.7.2.4 1.1.1.3] D CI104_01540 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CI104_18400 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CI104_04610 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:cfar00521] D CI104_17975 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D CI104_07770 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D CI104_18635 inositol-1-monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D CI104_24900 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CI104_24905 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D CI104_17975 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:cfar00525] D CI104_24900 rfbA; glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D CI104_24905 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:cfar00401] D CI104_18975 tyrA; bifunctional chorismate mutase/prephenate dehydrogenase K14187 tyrA; chorismate mutase / prephenate dehydrogenase [EC:5.4.99.5 1.3.1.12] D CI104_09135 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CI104_16355 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CI104_23330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D CI104_14170 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D CI104_10530 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CI104_01265 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_22825 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_10535 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_20765 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_14025 enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CI104_01320 acyl carrier protein K02078 acpP; acyl carrier protein D CI104_01325 acyl carrier protein K02078 acpP; acyl carrier protein D CI104_22830 acyl carrier protein K02078 acpP; acyl carrier protein D CI104_10540 acyl carrier protein K02078 acpP; acyl carrier protein D CI104_09965 acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:cfar00999] D CI104_04240 metK; methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D CI104_02240 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D CI104_16760 beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21] C 00997 Biosynthesis of various other secondary metabolites D CI104_22060 alanine racemase K21898 orr; ornithine racemase [EC:5.1.1.12] B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:cfar00362] D CI104_13190 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D CI104_13185 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D CI104_13180 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D CI104_13175 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D CI104_13195 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CI104_13205 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D CI104_13200 catC; muconolactone delta-isomerase K03464 catC; muconolactone D-isomerase [EC:5.3.3.4] D CI104_13785 pcaD; 3-oxoadipate enol-lactonase K01055 pcaD; 3-oxoadipate enol-lactonase [EC:3.1.1.24] D CI104_13805 3-oxoadipate CoA-transferase K01031 pcaI; 3-oxoadipate CoA-transferase, alpha subunit [EC:2.8.3.6] D CI104_13800 CoA transferase subunit B K01032 pcaJ; 3-oxoadipate CoA-transferase, beta subunit [EC:2.8.3.6] D CI104_24655 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CI104_17835 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CI104_13795 pcaF; 3-oxoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D CI104_13280 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D CI104_13555 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D CI104_13550 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] D CI104_08400 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D CI104_13790 3-carboxy-cis,cis-muconate cycloisomerase K01857 pcaB; 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2] D CI104_24050 carboxymuconolactone decarboxylase family protein K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CI104_13780 pcaC; 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D CI104_02855 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D CI104_02845 4-oxalomesaconate tautomerase K16514 galD; 4-oxalomesaconate tautomerase [EC:5.3.2.8] D CI104_02850 PIG-L family deacetylase K16515 galB; 4-oxalomesaconate hydratase [EC:4.2.1.83] D CI104_21295 pobA; 4-hydroxybenzoate 3-monooxygenase K00481 pobA; p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2] D CI104_16805 salicylate hydroxylase K22270 nagX; 3-hydroxybenzoate 6-monooxygenase [EC:1.14.13.24] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:cfar00627] D CI104_09305 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D CI104_19905 UbiD family decarboxylase K01612 bsdC; vanillate/4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.- 4.1.1.61] D CI104_19900 hypothetical protein K21759 bsdD; vanillate/4-hydroxybenzoate decarboxylase subunit D [EC:4.1.1.- 4.1.1.61] D CI104_17700 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CI104_19910 phenolic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CI104_02855 2-pyrone-4,6-dicarboxylate hydrolase K10221 ligI; 2-pyrone-4,6-dicarboxylate lactonase [EC:3.1.1.57] D CI104_01625 acetyl-CoA--acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CI104_17255 acetyl-CoA--acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CI104_01620 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CI104_17260 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CI104_12055 acetate CoA-transferase YdiF K19709 ydiF; acetate CoA-transferase [EC:2.8.3.8] C 00364 Fluorobenzoate degradation [PATH:cfar00364] D CI104_13190 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D CI104_13185 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D CI104_13180 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D CI104_13175 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D CI104_13195 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CI104_24720 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CI104_04005 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CI104_13205 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00625 Chloroalkane and chloroalkene degradation [PATH:cfar00625] D CI104_09930 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CI104_26350 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_00750 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_13580 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_26390 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_27435 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_25785 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_14295 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:cfar00361] D CI104_13195 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CI104_24720 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CI104_04005 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CI104_13205 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] C 00623 Toluene degradation [PATH:cfar00623] D CI104_13195 catA; catechol 1,2-dioxygenase K03381 catA; catechol 1,2-dioxygenase [EC:1.13.11.1] D CI104_13205 muconate cycloisomerase K01856 catB; muconate cycloisomerase [EC:5.5.1.1] D CI104_24720 carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D CI104_04005 dienelactone hydrolase family protein K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:cfar00622] D CI104_13190 benzoate 1,2-dioxygenase large subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D CI104_13185 benB; benzoate 1,2-dioxygenase small subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D CI104_13180 NADH oxidase K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D CI104_13175 benD; 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D CI104_13280 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00633 Nitrotoluene degradation [PATH:cfar00633] D CI104_08695 NADPH-dependent oxidoreductase K10678 nfsA; nitroreductase [EC:1.-.-.-] D CI104_07145 NAD(P)H-dependent oxidoreductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D CI104_12405 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D CI104_00365 alkene reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D CI104_04035 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D CI104_04020 hydrogenase 2 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] C 00642 Ethylbenzene degradation D CI104_24655 fadA; acetyl-CoA C-acyltransferase FadA K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D CI104_17835 fadI; acetyl-CoA C-acyltransferase FadI K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 00643 Styrene degradation D CI104_16810 maiA; maleylacetoacetate isomerase K01800 maiA; maleylacetoacetate isomerase [EC:5.2.1.2] C 00791 Atrazine degradation D CI104_03700 ureC; urease subunit alpha K01428 ureC; urease subunit alpha [EC:3.5.1.5] D CI104_03705 urease subunit beta K01429 ureB; urease subunit beta [EC:3.5.1.5] D CI104_03710 urease subunit gamma K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:cfar00930] D CI104_15685 alpha/beta hydrolase K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83] D CI104_24650 fadB; fatty acid oxidation complex subunit alpha FadB K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D CI104_17830 fadJ; fatty acid oxidation complex subunit alpha FadJ K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation D CI104_13280 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] C 00626 Naphthalene degradation [PATH:cfar00626] D CI104_09930 zinc-dependent alcohol dehydrogenase K13953 adhP; alcohol dehydrogenase, propanol-preferring [EC:1.1.1.1] D CI104_26350 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_00750 L-threonine dehydrogenase K13954 yiaY; alcohol dehydrogenase [EC:1.1.1.1] D CI104_13580 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_26390 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_27435 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_25785 S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase K00121 frmA; S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1] D CI104_14295 bifunctional acetaldehyde-CoA/alcohol dehydrogenase K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D CI104_13555 pcaG; protocatechuate 3,4-dioxygenase subunit alpha K00448 pcaG; protocatechuate 3,4-dioxygenase, alpha subunit [EC:1.13.11.3] D CI104_13550 pcaH; protocatechuate 3,4-dioxygenase subunit beta K00449 pcaH; protocatechuate 3,4-dioxygenase, beta subunit [EC:1.13.11.3] C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:cfar03020] D CI104_23765 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CI104_23760 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CI104_02170 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CI104_00460 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:cfar03010] D CI104_09045 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CI104_05290 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CI104_02075 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CI104_02165 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CI104_02130 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CI104_22425 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CI104_02005 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CI104_02115 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CI104_02570 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CI104_02040 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CI104_02160 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CI104_02000 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CI104_02155 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CI104_02110 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CI104_02910 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CI104_19030 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CI104_02090 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CI104_22415 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CI104_02065 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CI104_04530 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CI104_03670 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CI104_23785 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CI104_02060 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CI104_02045 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CI104_02050 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CI104_02105 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CI104_02120 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CI104_23770 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CI104_22410 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CI104_23775 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CI104_23790 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CI104_02565 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CI104_02095 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CI104_02140 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CI104_02080 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CI104_02175 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CI104_02125 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CI104_19015 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CI104_11950 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CI104_02775 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CI104_02070 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CI104_02055 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CI104_02100 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CI104_17065 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CI104_02780 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CI104_00520 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CI104_02085 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CI104_02135 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CI104_24085 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CI104_10515 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CI104_00525 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CI104_25285 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CI104_11945 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CI104_02150 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CI104_06550 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CI104_18935 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_25065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_24625 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_05460 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_23650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_24610 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_05470 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_23860 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_25055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_02270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_24605 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CI104_02275 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:cfar00970] D CI104_18020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_18025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_02265 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_23865 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_24615 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_19655 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_17860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_24860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_19660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_19665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_19670 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_07035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_15990 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CI104_16005 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CI104_16055 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CI104_16065 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CI104_05480 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CI104_05535 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CI104_25045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CI104_15735 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CI104_07635 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CI104_07650 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CI104_07655 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CI104_07640 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CI104_18930 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CI104_05465 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CI104_23645 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CI104_25060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CI104_20875 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_15740 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_23815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_22570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_22575 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_22580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_24855 tRNA-His K14226 tRNA-His; tRNA His D CI104_02260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CI104_23870 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CI104_24620 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CI104_21930 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_02835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_15730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_07660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_21240 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_21245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_21250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_24850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_08090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_08100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_08105 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_08110 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_18060 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_07645 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_02880 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_03640 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_07665 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_20280 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_20285 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_20290 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_04110 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CI104_22730 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CI104_00955 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CI104_17085 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CI104_24845 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CI104_19675 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_08870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_10210 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_15980 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_09320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_23825 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CI104_02280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CI104_05790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CI104_23810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CI104_25040 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CI104_23820 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CI104_14335 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CI104_14340 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CI104_08095 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_12325 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_12320 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_18045 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_18050 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_18055 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_00395 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D CI104_18040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CI104_07710 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CI104_19690 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CI104_15385 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CI104_09150 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CI104_00860 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CI104_00865 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CI104_11935 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CI104_08935 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CI104_00740 L-selenocysteinyl-tRNA(Sec) synthase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CI104_22155 SelA-like pyridoxal phosphate-dependent enzyme K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D CI104_06990 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CI104_16705 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CI104_02210 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CI104_21995 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CI104_07570 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CI104_04545 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CI104_20995 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CI104_15425 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CI104_05425 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CI104_18540 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CI104_11955 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CI104_11960 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CI104_12470 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CI104_01820 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:cfar03060] D CI104_02145 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CI104_23800 protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CI104_02830 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CI104_06235 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CI104_06240 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CI104_06230 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CI104_25270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CI104_04940 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CI104_00660 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CI104_04935 secA regulator SecM K13301 secM; secretion monitor D CI104_19035 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CI104_06515 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CI104_01400 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CI104_20860 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CI104_24690 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D CI104_24685 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CI104_24680 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CI104_07490 twin-arginine translocase subunit TatE K03425 tatE; sec-independent protein translocase protein TatE D CI104_18825 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CI104_26630 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D CI104_04550 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:cfar04122] D CI104_18620 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CI104_18575 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D CI104_01370 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CI104_01995 sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D CI104_01990 sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D CI104_01985 sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D CI104_09310 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D CI104_10995 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CI104_08325 moaE; molybdopterin synthase catalytic subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D CI104_08305 GTP 3',8-cyclase MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D CI104_08320 moaD; molybdopterin synthase sulfur carrier subunit K03636 moaD; sulfur-carrier protein D CI104_11750 sulfurtransferase K21028 ynjE; molybdopterin synthase sulfurtransferase [EC:2.8.1.11] D CI104_08560 moeB; molybdopterin-synthase adenylyltransferase MoeB K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D CI104_08315 moaC; cyclic pyranopterin monophosphate synthase MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D CI104_04495 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D CI104_08310 moaB; molybdenum cofactor biosynthesis protein K03638 moaB; molybdopterin adenylyltransferase [EC:2.7.7.75] D CI104_06315 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CI104_23730 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein D CI104_23725 molybdopterin-synthase adenylyltransferase MoeB K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73] C 03050 Proteasome C 03018 RNA degradation [PATH:cfar03018] D CI104_20365 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CI104_10490 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CI104_24945 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D CI104_20035 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CI104_02915 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CI104_08380 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CI104_22500 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CI104_02925 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CI104_24760 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CI104_21870 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CI104_24930 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CI104_24210 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_24365 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_04510 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CI104_22685 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CI104_22535 RNA-binding protein Hfq K03666 hfq; host factor-I protein D CI104_18480 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CI104_05165 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:cfar03030] D CI104_15270 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_27880 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_28120 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_05530 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CI104_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CI104_06620 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CI104_10565 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CI104_07560 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CI104_21230 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CI104_21990 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CI104_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CI104_23340 replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CI104_03665 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CI104_23310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_28175 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_05525 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CI104_05365 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CI104_24570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CI104_00470 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CI104_18105 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:cfar03410] D CI104_12490 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CI104_18875 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CI104_04145 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CI104_00530 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CI104_07865 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CI104_16595 3-methyladenine DNA glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CI104_00935 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CI104_03645 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CI104_11775 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CI104_16930 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CI104_24570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CI104_21005 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CI104_00470 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CI104_18105 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:cfar03420] D CI104_10905 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CI104_26365 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D CI104_23315 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D CI104_26400 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D CI104_08295 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CI104_15750 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CI104_16020 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CI104_24785 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CI104_24570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CI104_00470 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CI104_18105 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:cfar03430] D CI104_19895 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CI104_22545 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D CI104_20375 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D CI104_16020 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CI104_24785 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CI104_16310 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D CI104_18510 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CI104_06310 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CI104_15280 DNA polymerase III subunit epsilon K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D CI104_21005 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CI104_23310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_28175 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CI104_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CI104_06620 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CI104_07560 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CI104_10565 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CI104_05530 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CI104_15270 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_27880 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_28120 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_21990 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CI104_21230 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CI104_00470 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CI104_18105 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CI104_09400 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_27145 DNA modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_01805 adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_10710 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_06845 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_03460 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] C 03440 Homologous recombination [PATH:cfar03440] D CI104_21005 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CI104_23310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_28175 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_00015 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CI104_18805 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CI104_06630 recombination protein RecR K06187 recR; recombination protein RecR D CI104_19700 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D CI104_24570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CI104_15365 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CI104_15360 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CI104_15370 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CI104_00445 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CI104_20315 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CI104_20325 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CI104_20310 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CI104_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CI104_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CI104_06620 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CI104_07560 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CI104_10565 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CI104_05530 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CI104_15270 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_27880 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_28120 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_21990 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CI104_21230 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CI104_24090 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CI104_22420 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D CI104_06605 primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D CI104_21315 primosomal protein DnaT K02317 dnaT; DNA replication protein DnaT C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 [PATH:cfar03250] D CI104_01880 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda [PATH:cfar03258] D CI104_11170 Head decoration protein K26962 D; Enterobacteria phage capsid decoration protein D CI104_11165 capsid assembly protein K21511 C; Enterobacteria phage capsid assembly protease [EC:3.4.21.-] D CI104_11160 phage portal protein K26963 B; Enterobacteria phage portal protein D CI104_11155 phage tail protein K26964 W; Enterobacteria phage head completion protein D CI104_11150 terminase K21512 A; Enterobacteria phage terminase large subunit [EC:3.1.21.4] D CI104_11270 hypothetical protein K26965 FI; Enterobacteria phage DNA-packaging protein FI D CI104_11275 phage tail protein K26966 FII; Enterobacteria phage head-tail connector protein FII D CI104_11280 phage tail protein K26967 Z; Enterobacteria phage tail completion protein D CI104_11290 phage tail protein K26969 V; Enterobacteria phage tail tube protein D CI104_11295 phage minor tail protein G K26970 G; Enterobacteria phage tail assembly protein G D CI104_11305 phage tail tape measure protein K26972 H; Enterobacteria phage tape measure protein # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:cfar02010] D CI104_18185 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D CI104_24205 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D CI104_18180 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D CI104_18175 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D CI104_18170 sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D CI104_05975 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CI104_20835 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CI104_05985 taurine transporter subunit K15552 tauC; taurine transport system permease protein D CI104_20830 ABC transporter permease K15552 tauC; taurine transport system permease protein D CI104_05980 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CI104_09180 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CI104_09170 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D CI104_09165 aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CI104_08205 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CI104_08210 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D CI104_08215 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CI104_08190 molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D CI104_05950 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D CI104_05945 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CI104_05940 fbpC; ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CI104_04795 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D CI104_04790 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D CI104_04785 thiamine ABC transporter ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D CI104_10940 spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CI104_10945 spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D CI104_10950 spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D CI104_10955 spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CI104_08710 spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein D CI104_08725 putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein D CI104_08720 putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein D CI104_08715 potG; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D CI104_19600 proline/glycine betaine ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D CI104_19595 proline/glycine betaine ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein D CI104_19590 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CI104_16755 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CI104_12695 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CI104_16740 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D CI104_16750 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D CI104_12690 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CI104_12700 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CI104_12685 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CI104_16745 ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CI104_23425 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D CI104_23430 maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D CI104_23435 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D CI104_03315 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_23420 maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_03095 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_13925 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_02745 phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D CI104_02740 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CI104_02735 phospholipid ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CI104_02750 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D CI104_02730 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CI104_20145 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D CI104_25090 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D CI104_02395 sugar ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D CI104_20150 ABC transporter permease K10440 rbsC; ribose transport system permease protein D CI104_25095 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D CI104_02405 ABC transporter permease K10440 rbsC; ribose transport system permease protein D CI104_02400 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CI104_20155 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CI104_25100 ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CI104_25105 D-ribose pyranase K06726 rbsD; D-ribose pyranase [EC:5.4.99.62] D CI104_15590 arabinose ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D CI104_15580 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein D CI104_15585 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D CI104_22275 sugar ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D CI104_22260 sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D CI104_22265 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D CI104_22270 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D CI104_16870 galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D CI104_16860 galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein D CI104_16865 galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D CI104_00830 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D CI104_00820 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D CI104_00825 D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D CI104_24285 rhaS; rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D CI104_24295 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D CI104_24300 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D CI104_24290 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D CI104_07245 ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D CI104_07230 ABC transporter permease K17203 eryF; erythritol transport system permease protein D CI104_07235 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D CI104_01470 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D CI104_01475 sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D CI104_01480 sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D CI104_01485 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D CI104_25205 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CI104_25210 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CI104_25215 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CI104_25220 phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CI104_23070 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CI104_23075 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CI104_23065 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CI104_17690 lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D CI104_17675 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D CI104_17680 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D CI104_17670 histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D CI104_17685 histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein D CI104_08460 amino acid ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein D CI104_08455 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein D CI104_08450 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D CI104_08740 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D CI104_08755 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D CI104_08745 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D CI104_08750 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D CI104_08760 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D CI104_07600 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D CI104_07590 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D CI104_07595 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D CI104_07585 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D CI104_02305 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D CI104_02300 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D CI104_02295 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D CI104_02290 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D CI104_15785 cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D CI104_15775 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D CI104_15770 L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D CI104_01425 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CI104_01445 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CI104_01450 high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D CI104_01455 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D CI104_01460 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D CI104_01465 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CI104_12190 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CI104_05440 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CI104_00325 lipoprotein NlpA K02073 metQ; D-methionine transport system substrate-binding protein D CI104_12185 ABC transporter permease K02072 metI; D-methionine transport system permease protein D CI104_05445 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D CI104_12180 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CI104_05450 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CI104_12835 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D CI104_12840 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D CI104_12845 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D CI104_12850 urtD; ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D CI104_12855 urtE; ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D CI104_14280 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CI104_13855 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CI104_14275 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D CI104_14270 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D CI104_14265 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D CI104_14260 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CI104_00985 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CI104_13355 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CI104_00995 dipeptide ABC transporter permease DppB K12369 dppB; dipeptide transport system permease protein D CI104_01000 dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein D CI104_01005 dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D CI104_01010 dppF; dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D CI104_14000 peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D CI104_14005 peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D CI104_14010 peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D CI104_14015 ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D CI104_14020 ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D CI104_01245 nikA; nickel ABC transporter, nickel/metallophore periplasmic binding protein K15584 nikA; nickel transport system substrate-binding protein D CI104_01240 nickel ABC transporter permease subunit NikB K15585 nikB; nickel transport system permease protein D CI104_01235 nickel ABC transporter permease subunit NikC K15586 nikC; nickel transport system permease protein D CI104_01230 nikD; nickel import ATP-binding protein NikD K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D CI104_08580 glutathione ABC transporter substrate-binding protein GsiB K13889 gsiB; glutathione transport system substrate-binding protein D CI104_08585 glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein D CI104_08590 glutathione ABC transporter permease GsiD K13891 gsiD; glutathione transport system permease protein D CI104_08575 glutathione ABC transporter ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein D CI104_17020 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D CI104_17025 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D CI104_17030 ABC transporter permease K13895 yejE; microcin C transport system permease protein D CI104_17035 microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D CI104_07325 Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CI104_07315 iron-enterobactin transporter K23186 fepD; iron-siderophore transport system permease protein D CI104_07310 iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein D CI104_07305 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CI104_05210 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CI104_05215 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D CI104_05205 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CI104_05240 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D CI104_11970 vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D CI104_11980 vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D CI104_15345 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D CI104_15355 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D CI104_15350 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CI104_19875 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D CI104_19885 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D CI104_19890 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D CI104_19880 manganese/iron transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein D CI104_16105 cobalt ABC transporter substrate-binding protein CbiN K02009 cbiN; cobalt/nickel transport protein D CI104_16110 cobalt ECF transporter S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein D CI104_16100 cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CI104_16095 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D CI104_04320 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D CI104_04315 cobalt ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CI104_04310 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CI104_21705 autoinducer 2 ABC transporter substrate-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein D CI104_21695 autoinducer 2 ABC transporter permease LsrC K10556 lsrC; AI-2 transport system permease protein D CI104_21700 autoinducer 2 ABC transporter permease LsrD K10557 lsrD; AI-2 transport system permease protein D CI104_21690 autoinducer 2 ABC transporter ATP-binding protein LsrA K10558 lsrA; AI-2 transport system ATP-binding protein D CI104_10915 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D CI104_10925 lipoprotein-releasing system transmembrane subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D CI104_10920 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CI104_17130 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D CI104_17135 heme ABC transporter permease K02195 ccmC; heme exporter protein C D CI104_17140 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D CI104_17145 cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D CI104_21975 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CI104_09980 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CI104_21970 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CI104_09975 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CI104_02700 lptB; ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CI104_01410 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CI104_01405 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CI104_09060 lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CI104_06480 multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CI104_06485 multidrug ABC transporter permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CI104_27455 peptidase C39 K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D CI104_19235 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D CI104_08895 amino acid ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CI104_08900 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CI104_22850 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D CI104_08840 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D CI104_17205 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:cfar02060] D CI104_18135 phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CI104_18130 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CI104_07020 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CI104_18140 glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CI104_10575 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CI104_07705 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CI104_20025 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_12555 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_18775 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CI104_19780 PTS cellobiose/arbutin/salicin transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D CI104_00095 PTS alpha-glucoside transporter subunit IICB K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D CI104_00425 PTS glucose transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D CI104_22125 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D CI104_04280 cmtB; PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D CI104_00720 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D CI104_04285 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D CI104_11845 PTS N N'-diacetylchitobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CI104_23755 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CI104_00250 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CI104_11835 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_05820 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_23750 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_00265 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_11840 PTS N,N'-diacetylchitobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CI104_21270 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CI104_18435 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D CI104_00260 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CI104_04595 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CI104_15125 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CI104_15130 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CI104_04585 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CI104_15135 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CI104_23545 PTS sorbose transporter subunit IIA K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D CI104_23550 PTS fructose transporter subunit IIB K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D CI104_23555 PTS mannose/fructose/sorbose transporter subunit IIC K02814 sorA; sorbose PTS system EIIC component D CI104_23560 PTS mannose transporter subunit IID K02815 sorM; sorbose PTS system EIID component D CI104_03045 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D CI104_03060 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D CI104_03055 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D CI104_03050 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D CI104_03025 PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D CI104_03020 PTS N-acetylgalactosamine transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component D CI104_03015 PTS N-acetylgalactosamine transporter subunit IID K10986 agaD; galactosamine PTS system EIID component D CI104_00295 PTS fructose transporter subunit IIA K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203] D CI104_00300 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203] D CI104_00305 PTS sugar transporter subunit IIC K17466 dgaC; D-glucosaminate PTS system EIIC component D CI104_00310 PTS fructose transporter subunit IID K17467 dgaD; D-glucosaminate PTS system EIID component D CI104_04580 PTS fructose transporter subunit IID K17467 dgaD; D-glucosaminate PTS system EIID component D CI104_19725 PTS glucitol/sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D CI104_17290 PTS glucose transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D CI104_17285 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D CI104_19720 srlE; PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D CI104_19715 srlA; PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component D CI104_17295 PTS sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component D CI104_13515 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D CI104_13500 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D CI104_13505 permease K02775 gatC; galactitol PTS system EIIC component D CI104_08970 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_17625 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_06205 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_22450 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_24340 PTS fructose transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_08990 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_17620 PTS mannitol transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_06200 PTS mannose transporter subunit IIA K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_22455 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_24360 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_08985 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_17615 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_06195 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_22460 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_24355 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_16965 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D CI104_16955 PTS fructose transporter subunit EIIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CI104_09870 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CI104_09875 DNA-binding protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D CI104_16960 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56] D CI104_20360 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D CI104_02675 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D CI104_02685 PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:cfar03070] D CI104_03830 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CI104_06235 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CI104_06240 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CI104_23800 protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CI104_02830 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CI104_02145 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CI104_06230 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CI104_25270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CI104_04940 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CI104_04935 secA regulator SecM K13301 secM; secretion monitor D CI104_01400 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CI104_00660 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CI104_19035 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CI104_24690 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D CI104_24685 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CI104_24680 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CI104_07490 twin-arginine translocase subunit TatE K03425 tatE; sec-independent protein translocase protein TatE D CI104_05675 type VI secretion protein Vgr K11904 vgrG; type VI secretion system secreted protein VgrG D CI104_09700 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D CI104_21600 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D CI104_03390 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D CI104_08655 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D CI104_05610 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D CI104_09690 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D CI104_05615 type VI secretion system-associated lipoprotein K11906 vasD; type VI secretion system protein VasD D CI104_09775 type VI secretion system-associated lipoprotein K11906 vasD; type VI secretion system protein VasD D CI104_05640 hypothetical protein K11891 impL; type VI secretion system protein ImpL D CI104_09755 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D CI104_05625 hypothetical protein K11892 impK; type VI secretion system protein ImpK D CI104_09680 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK D CI104_05570 clpV; ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D CI104_09695 clpV; ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D CI104_21605 clpV; ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:cfar02020] D CI104_06135 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CI104_24410 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CI104_06130 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CI104_06065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CI104_25205 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CI104_10975 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CI104_10980 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D CI104_01725 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CI104_01720 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D CI104_17225 porin OmpC K09475 ompC; outer membrane pore protein C D CI104_24230 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CI104_24225 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D CI104_03235 EnvZ/OmpR regulon moderator K25864 mzrA; modulator protein MzrA D CI104_12590 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D CI104_12595 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D CI104_05255 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D CI104_04435 two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D CI104_04430 DNA-binding response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D CI104_16625 two-component system sensor histidine kinase BaeA K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D CI104_16630 DNA-binding response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D CI104_16605 multidrug transporter subunit MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D CI104_16610 multidrug transporter subunit MdtB K07788 mdtB; multidrug efflux pump D CI104_16615 multidrug transporter subunit MdtC K07789 mdtC; multidrug efflux pump D CI104_16620 multidrug transporter subunit MdtD K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D CI104_18355 multidrug efflux RND transporter permease subunit K18324 acrD; multidrug efflux pump D CI104_23025 two-component system sensor histidine kinase BasS K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D CI104_23020 DNA-binding response regulator K07771 basR; two-component system, OmpR family, response regulator BasR D CI104_17400 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CI104_26305 sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CI104_07050 two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CI104_07055 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D CI104_07060 copper transporter K07796 cusC; outer membrane protein, copper/silver efflux system D CI104_07065 copper-binding protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D CI104_07070 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D CI104_07075 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D CI104_03895 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CI104_20230 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D CI104_03900 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D CI104_26405 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D CI104_15560 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CI104_15555 flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CI104_15800 flagellin FliC K02406 fliC; flagellin D CI104_15795 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CI104_15550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CI104_07790 two-component system sensor histidine kinase KdbD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CI104_07785 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CI104_07805 potassium-transporting ATPase subunit KdpA K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D CI104_07800 kdpB; K(+)-transporting ATPase subunit B K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D CI104_07795 potassium-transporting ATPase subunit KdpC K01548 kdpC; potassium-transporting ATPase KdpC subunit D CI104_07810 K(+)-transporting ATPase subunit F K01545 kdpF; potassium-transporting ATPase KdpF subunit D CI104_02655 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D CI104_04445 DNA-binding response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D CI104_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CI104_13075 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CI104_07275 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D CI104_14220 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D CI104_07455 dpiB; histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D CI104_07460 dpiA; response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB D CI104_07450 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D CI104_19410 citC; [citrate (pro-3S)-lyase] ligase K01910 citC; [citrate (pro-3S)-lyase] ligase [EC:6.2.1.22] D CI104_07445 citD; citrate lyase ACP K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D CI104_19405 citD; citrate lyase acyl carrier protein K01646 citD; citrate lyase subunit gamma (acyl carrier protein) D CI104_07440 citE; citrate (pro-3S)-lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D CI104_19400 citE; citrate (pro-3S)-lyase subunit beta K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D CI104_07435 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D CI104_19395 citF; citrate lyase subunit alpha K01643 citF; citrate lyase subunit alpha / citrate CoA-transferase [EC:2.8.3.10] D CI104_07430 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61] D CI104_19390 citX; citrate lyase holo-[acyl-carrier protein] synthase K05964 citX; holo-ACP synthase [EC:2.7.7.61] D CI104_07425 triphosphoribosyl-dephospho-CoA synthase K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D CI104_19385 citG; triphosphoribosyl-dephospho-CoA synthase CitG K05966 citG; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D CI104_07420 anion permease K09477 citT; citrate:succinate antiporter D CI104_22950 two-component system sensor histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D CI104_22955 two-component system response regulator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D CI104_22960 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CI104_00390 C4-dicarboxylate ABC transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CI104_13115 NAD-dependent malic enzyme K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] D CI104_14375 nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D CI104_14380 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D CI104_18350 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D CI104_17105 DNA-binding response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D CI104_13225 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CI104_14360 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CI104_13230 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CI104_14355 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CI104_13240 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CI104_14345 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CI104_13235 nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D CI104_14350 narJ; nitrate reductase molybdenum cofactor assembly chaperone K00373 narJ; nitrate reductase molybdenum cofactor assembly chaperone NarJ/NarW D CI104_13145 fdnG; formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D CI104_13140 fdxH; formate dehydrogenase subunit beta K08349 fdnH; formate dehydrogenase-N, beta subunit D CI104_13135 formate dehydrogenase subunit gamma K08350 fdnI; formate dehydrogenase-N, gamma subunit D CI104_22615 fumarate reductase (quinol) flavoprotein subunit K00244 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CI104_22620 succinate dehydrogenase/fumarate reductase iron-sulfur subunit K00245 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CI104_22625 fumarate reductase subunit FrdC K00246 frdC; succinate dehydrogenase subunit C D CI104_22630 fumarate reductase subunit FrdD K00247 frdD; succinate dehydrogenase subunit D D CI104_05955 MFS transporter family glucose-6-phosphate receptor UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CI104_00205 MFS transporter family glucose-6-phosphate receptor UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CI104_00200 signal transduction histidine-protein kinase/phosphatase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D CI104_00195 DNA-binding response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA D CI104_00210 hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D CI104_05960 sensor histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D CI104_05965 DNA-binding response regulator K20264 fusR; two-component system, NarL family, response regulator FusR D CI104_05435 Rcs stress response system protein RcsF K06080 rcsF; RcsF protein D CI104_17240 two-component system sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D CI104_17230 phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D CI104_15910 rcsA; helix-turn-helix transcriptional regulator K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D CI104_17235 DNA-binding response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D CI104_20060 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CI104_15755 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CI104_15765 transcriptional regulator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D CI104_19685 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CI104_20720 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D CI104_20725 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D CI104_15505 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D CI104_15520 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D CI104_15525 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D CI104_20635 molecular chaperone FimC K07346 fimC; fimbrial chaperone protein D CI104_15515 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D CI104_11395 hypothetical protein K07346 fimC; fimbrial chaperone protein D CI104_13685 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_20515 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CI104_20640 fimbrial protein K07347 fimD; outer membrane usher protein D CI104_20700 fimbrial protein K07347 fimD; outer membrane usher protein D CI104_15465 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_15510 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_11400 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_05275 bifunctional uridylyltransferase/uridylyl-removing protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D CI104_18730 nitrogen regulatory protein P-II 1 K04751 glnB; nitrogen regulatory protein P-II 1 D CI104_24535 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CI104_24540 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D CI104_24530 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CI104_23670 two-component sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D CI104_23665 two-component system response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D CI104_23675 zraP; zinc resistance-associated protein ZraP K07803 zraP; zinc resistance-associated protein D CI104_17245 PAS domain-containing sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CI104_17250 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CI104_01625 acetyl-CoA--acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CI104_17255 acetyl-CoA--acetoacetyl-CoA transferase subunit alpha K01034 atoD; acetate CoA/acetoacetate CoA-transferase alpha subunit [EC:2.8.3.8 2.8.3.9] D CI104_01620 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CI104_17260 CoA transferase subunit B K01035 atoA; acetate CoA/acetoacetate CoA-transferase beta subunit [EC:2.8.3.8 2.8.3.9] D CI104_17265 TIGR00366 family protein K02106 atoE; short-chain fatty acids transporter D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_02860 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D CI104_01080 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D CI104_02695 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CI104_18745 sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CI104_18735 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CI104_04020 hydrogenase 2 small subunit K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D CI104_04035 hydrogenase 2 large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D CI104_15490 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CI104_14525 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_27575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_04010 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_13060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_12905 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CI104_21365 methyl-accepting chemotaxis protein II K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CI104_22235 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CI104_03370 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D CI104_15500 methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D CI104_13570 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D CI104_15495 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D CI104_03365 hypothetical protein K03776 aer; aerotaxis receptor D CI104_13305 hypothetical protein K03776 aer; aerotaxis receptor D CI104_15535 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CI104_15480 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CI104_15485 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CI104_17485 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CI104_20760 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CI104_12220 sensor histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D CI104_12225 DNA-binding response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D CI104_12205 tetrathionate reductase subunit TtrA K08357 ttrA; tetrathionate reductase subunit A D CI104_12215 tetrathionate reductase subunit TtrB K08358 ttrB; tetrathionate reductase subunit B D CI104_12210 tetrathionate reductase subunit TtrC K08359 ttrC; tetrathionate reductase subunit C D CI104_07585 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D CI104_07590 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D CI104_07595 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D CI104_07600 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D CI104_01910 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CI104_24970 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CI104_07995 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CI104_12910 glutaminase K01425 glsA; glutaminase [EC:3.5.1.2] D CI104_14495 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D CI104_14505 cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D CI104_14500 cytochrome b K00410 fbcH; ubiquinol-cytochrome c reductase cytochrome b/c1 subunit D CI104_13430 cytochrome ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CI104_08035 cytochrome bd-I ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CI104_13435 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CI104_26340 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CI104_08040 cydB; cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CI104_08045 cytochrome bd-I oxidase subunit CydX K00424 cydX; cytochrome bd-I ubiquinol oxidase subunit X [EC:7.1.1.7] D CI104_03830 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CI104_16560 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CI104_16555 low molecular weight protein-tyrosine-phosphatase Wzb K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D CI104_16550 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CI104_24915 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D CI104_24910 UDP-N-acetyl-D-mannosamine dehydrogenase K02472 wecC; UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase [EC:1.1.1.336] D CI104_08230 acyl-CoA thioesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11] D CI104_10410 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:cfar04148] D CI104_07780 speF; ornithine decarboxylase SpeF K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D CI104_04125 ornithine decarboxylase K01581 E4.1.1.17; ornithine decarboxylase [EC:4.1.1.17] D CI104_14495 petA; ubiquinol-cytochrome c reductase iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:cfar02024] D CI104_19635 S-ribosylhomocysteine lyase K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21] D CI104_22535 RNA-binding protein Hfq K03666 hfq; host factor-I protein D CI104_14170 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D CI104_12005 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CI104_18980 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CI104_08145 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CI104_03895 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CI104_20230 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D CI104_03900 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D CI104_18745 sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CI104_18735 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CI104_26405 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D CI104_15560 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CI104_15555 flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CI104_07785 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CI104_05960 sensor histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D CI104_05965 DNA-binding response regulator K20264 fusR; two-component system, NarL family, response regulator FusR D CI104_15765 transcriptional regulator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D CI104_21705 autoinducer 2 ABC transporter substrate-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein D CI104_21695 autoinducer 2 ABC transporter permease LsrC K10556 lsrC; AI-2 transport system permease protein D CI104_21700 autoinducer 2 ABC transporter permease LsrD K10557 lsrD; AI-2 transport system permease protein D CI104_21690 autoinducer 2 ABC transporter ATP-binding protein LsrA K10558 lsrA; AI-2 transport system ATP-binding protein D CI104_21680 autoinducer-2 kinase K11216 lsrK; autoinducer-2 kinase [EC:2.7.1.189] D CI104_21685 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor D CI104_21710 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase K08321 lsrF; 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [EC:2.3.1.245] D CI104_21715 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase K11530 lsrG; (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [EC:5.3.1.32] D CI104_13410 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CI104_13395 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CI104_13400 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CI104_13405 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CI104_01425 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CI104_01445 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CI104_01450 high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D CI104_01455 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D CI104_01460 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D CI104_01465 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CI104_20670 acyl homoserine lactone synthase K22956 expI; acyl homoserine lactone synthase [EC:2.3.1.184] D CI104_20665 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D CI104_15910 rcsA; helix-turn-helix transcriptional regulator K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D CI104_14040 GGDEF domain-containing protein K14051 gmr; c-di-GMP phosphodiesterase Gmr [EC:3.1.4.52] D CI104_19225 hypothetical protein K20276 bapA; large repetitive protein D CI104_15065 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CI104_01910 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CI104_24970 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CI104_23365 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D CI104_14085 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25] D CI104_06270 ribD; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CI104_13345 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CI104_13630 transporter K18139 oprM; outer membrane protein, multidrug efflux system D CI104_14280 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CI104_13855 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CI104_14275 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D CI104_14270 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D CI104_14265 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D CI104_14260 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CI104_20815 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CI104_13080 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CI104_20810 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CI104_13085 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CI104_20805 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CI104_13090 D-ala-D-ala transporter subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CI104_20800 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CI104_13095 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CI104_13100 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D CI104_25270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CI104_23800 protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CI104_02830 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CI104_02145 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CI104_06230 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CI104_04940 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CI104_01400 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CI104_00660 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CI104_19035 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:cfar02030] D CI104_14525 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_27575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_04010 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_13060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_12905 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CI104_21365 methyl-accepting chemotaxis protein II K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CI104_22235 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CI104_03370 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D CI104_15500 methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D CI104_13570 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D CI104_15495 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D CI104_03365 hypothetical protein K03776 aer; aerotaxis receptor D CI104_13305 hypothetical protein K03776 aer; aerotaxis receptor D CI104_23425 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D CI104_20145 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D CI104_25090 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D CI104_02395 sugar ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D CI104_16870 galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D CI104_00985 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CI104_13355 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CI104_15535 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CI104_15480 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CI104_15475 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D CI104_15485 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CI104_17485 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CI104_15490 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CI104_15850 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CI104_15880 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CI104_15885 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CI104_15550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CI104_05745 putative lateral flagellar export/assembly protein LafU K02557 motB; chemotaxis protein MotB D CI104_15545 motB; motility protein MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:cfar02040] D CI104_15840 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CI104_15845 flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CI104_15850 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CI104_15855 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D CI104_15860 fliI; flagellum-specific ATP synthase FliL K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CI104_15865 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D CI104_15870 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D CI104_15875 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CI104_15880 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CI104_15885 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CI104_15890 fliO; flagellar type III secretion system protein FliO K02418 fliO; flagellar protein FliO/FliZ D CI104_15895 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CI104_15900 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CI104_15905 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CI104_15440 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D CI104_05740 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CI104_15445 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CI104_15450 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CI104_10415 flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D CI104_10425 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CI104_10430 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CI104_10435 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CI104_10440 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CI104_10445 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D CI104_10450 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CI104_10455 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D CI104_10460 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D CI104_10465 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CI104_10470 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CI104_10475 flgL; flagellar hook-filament junction protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D CI104_15800 flagellin FliC K02406 fliC; flagellin D CI104_15805 flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D CI104_15810 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CI104_15815 flagella biosynthesis regulatory protein FliT K02423 fliT; flagellar protein FliT D CI104_15550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CI104_05745 putative lateral flagellar export/assembly protein LafU K02557 motB; chemotaxis protein MotB D CI104_15545 motB; motility protein MotB K02557 motB; chemotaxis protein MotB D CI104_10410 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D CI104_10405 flagella biosynthesis chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN D CI104_15785 cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D CI104_15790 flagella biosynthesis regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D CI104_03660 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CI104_19460 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D CI104_26405 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D CI104_15560 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CI104_15555 flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CI104_02695 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CI104_15795 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CI104_20035 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism D CI104_23600 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:cfar01501] D CI104_17225 porin OmpC K09475 ompC; outer membrane pore protein C D CI104_06395 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D CI104_10605 beta-N-acetylhexosaminidase K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D CI104_14700 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D CI104_25670 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D CI104_25700 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D CI104_14280 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CI104_13855 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CI104_14275 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D CI104_14270 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D CI104_14265 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D CI104_14260 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CI104_14705 SED family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D CI104_06580 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CI104_06575 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CI104_08505 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CI104_13630 transporter K18139 oprM; outer membrane protein, multidrug efflux system D CI104_03830 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CI104_01760 carboxypeptidase/penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CI104_07530 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CI104_04870 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CI104_15160 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CI104_28625 class A broad-spectrum beta-lactamase TEM-1 K18698 blaTEM; beta-lactamase class A TEM [EC:3.5.2.6] D CI104_27485 class A broad-spectrum beta-lactamase TEM-1 K18698 blaTEM; beta-lactamase class A TEM [EC:3.5.2.6] D CI104_26520 class A broad-spectrum beta-lactamase TEM-1 K18698 blaTEM; beta-lactamase class A TEM [EC:3.5.2.6] D CI104_26785 class A broad-spectrum beta-lactamase TEM-1 K18698 blaTEM; beta-lactamase class A TEM [EC:3.5.2.6] D CI104_19205 class A extended-spectrum beta-lactamase SHV-12 K18699 blaSHV; beta-lactamase class A SHV [EC:3.5.2.6] D CI104_26890 class A extended-spectrum beta-lactamase SHV-12 K18699 blaSHV; beta-lactamase class A SHV [EC:3.5.2.6] D CI104_28570 carbapenem-hydrolyzing class A beta-lactamase KPC-2 K18768 blaKPC; beta-lactamase class A KPC [EC:3.5.2.6] D CI104_26860 oxacillin-hydrolyzing class D beta-lactamase OXA-1 K18790 blaOXA-1; beta-lactamase class D OXA-1 [EC:3.5.2.6] C 01502 Vancomycin resistance [PATH:cfar01502] D CI104_13075 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CI104_04910 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CI104_06045 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CI104_14625 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CI104_23335 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CI104_04880 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CI104_04885 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CI104_04900 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cfar01503] D CI104_10975 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CI104_10980 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D CI104_00950 kdo(2)-lipid A phosphoethanolamine 7''-transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D CI104_07470 pagP; phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D CI104_17400 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CI104_17405 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K10012 arnC; undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:2.4.2.53] D CI104_17410 bifunctional UDP-4-amino-4-deoxy-L-arabinose formyltransferase/UDP-glucuronic acid oxidase ArnA K10011 arnA; UDP-4-amino-4-deoxy-L-arabinose formyltransferase / UDP-glucuronic acid dehydrogenase (UDP-4-keto-hexauronic acid decarboxylating) [EC:2.1.2.13 1.1.1.305] D CI104_17415 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase K13014 arnD; undecaprenyl phosphate-alpha-L-ara4FN deformylase [EC:3.5.1.-] D CI104_17420 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D CI104_17425 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D CI104_17430 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12963 arnF; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnF D CI104_17435 signal transduction protein PmrD K19238 pmrD; signal transduction protein PmrD D CI104_23025 two-component system sensor histidine kinase BasS K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D CI104_23020 DNA-binding response regulator K07771 basR; two-component system, OmpR family, response regulator BasR D CI104_23015 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D CI104_26315 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D CI104_14000 peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D CI104_14005 peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D CI104_14010 peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D CI104_14015 ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D CI104_14020 ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D CI104_05415 copper homeostasis/adhesion lipoprotein NlpE K06079 cutF; copper homeostasis protein (lipoprotein) D CI104_24230 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CI104_24225 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D CI104_20295 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_18215 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_22550 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_10900 L,D-transpeptidase K19236 ycfS; L,D-transpeptidase YcfS D CI104_05255 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D CI104_24580 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CI104_22870 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CI104_01880 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CI104_12875 MDR efflux pump AcrAB transcriptional activator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D CI104_14545 AraC family transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D CI104_06580 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CI104_06575 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CI104_08505 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CI104_03830 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CI104_05355 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:cfar01000] C 01001 Protein kinases [BR:cfar01001] D CI104_26665 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CI104_13005 serine/threonine protein kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CI104_16550 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CI104_06135 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CI104_24410 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CI104_10975 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CI104_01725 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CI104_12590 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D CI104_24230 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CI104_04435 two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D CI104_16625 two-component system sensor histidine kinase BaeA K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D CI104_23025 two-component system sensor histidine kinase BasS K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D CI104_26305 sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CI104_07050 two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CI104_03895 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CI104_07790 two-component system sensor histidine kinase KdbD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CI104_02655 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D CI104_14375 nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D CI104_18350 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D CI104_00200 signal transduction histidine-protein kinase/phosphatase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D CI104_05960 sensor histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D CI104_17230 phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D CI104_17240 two-component system sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D CI104_20060 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CI104_20720 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D CI104_07455 dpiB; histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D CI104_22950 two-component system sensor histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D CI104_17950 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CI104_16725 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CI104_24535 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CI104_23670 two-component sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D CI104_17245 PAS domain-containing sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CI104_18745 sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CI104_12220 sensor histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:cfar01009] D CI104_24210 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_24365 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_06635 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CI104_21150 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:cfar01002] D CI104_26630 lspA; signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D CI104_04550 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CI104_02035 prepilin peptidase K02506 hofD; leader peptidase HopD [EC:3.4.23.43] D CI104_04040 hybD; hydrogenase expression/formation protein K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D CI104_19795 hydrogenase 3 maturation endopeptidase HyCI K08315 hycI; hydrogenase 3 maturation protease [EC:3.4.23.51] D CI104_07860 pcp; pyroglutamyl-peptidase I K01304 pcp; pyroglutamyl-peptidase [EC:3.4.19.3] D CI104_18500 glutamine-hydrolyzing GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CI104_18160 GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D CI104_27455 peptidase C39 K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D CI104_13720 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CI104_17010 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CI104_12380 peptidoglycan endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D CI104_05730 endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D CI104_11985 endopeptidase K13695 nlpC; probable lipoprotein NlpC D CI104_17705 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D CI104_02635 glutamate synthase large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D CI104_25200 glmS; glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CI104_07670 asnB; asparagine synthase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D CI104_02970 type 1 glutamine amidotransferase K05520 yhbO; deglycase [EC:3.5.1.124] D CI104_06340 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124] D CI104_16070 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK D CI104_12160 murein L,D-transpeptidase K19234 ynhG; L,D-transpeptidase YnhG D CI104_08515 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D CI104_10900 L,D-transpeptidase K19236 ycfS; L,D-transpeptidase YcfS D CI104_09120 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D CI104_27465 CPBP family intramembrane metalloprotease K07052 K07052; CAAX protease family protein D CI104_09160 aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2] D CI104_01165 oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D CI104_12795 peptidyl-dipeptidase Dcp K01284 dcp; peptidyl-dipeptidase Dcp [EC:3.4.15.5] D CI104_13075 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CI104_20320 pitrilysin K01407 ptrA; protease III [EC:3.4.24.55] D CI104_21985 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CI104_18445 leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CI104_18585 aminopeptidase PepB K07751 pepB; PepB aminopeptidase [EC:3.4.11.23] D CI104_18365 succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D CI104_10965 pepT; peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4] D CI104_05755 cytosol nonspecific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D CI104_15340 murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D CI104_05280 map; type I methionyl aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CI104_24645 Xaa-Pro dipeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9] D CI104_21090 Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CI104_19980 Zn-dependent exopeptidase M28 K09612 iap; alkaline phosphatase isozyme conversion protein [EC:3.4.11.-] D CI104_12660 carboxypeptidase M32 K01299 E3.4.17.19; carboxypeptidase Taq [EC:3.4.17.19] D CI104_20740 iadA; beta-aspartyl-peptidase K01305 iadA; beta-aspartyl-dipeptidase (metallo-type) [EC:3.4.19.-] D CI104_02815 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CI104_13495 aminopeptidase K20609 sgcX; putative aminopeptidase [EC:3.4.11.-] D CI104_15205 protease HtpX K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D CI104_04270 metalloprotease K07387 K07387; metalloprotease [EC:3.4.24.-] D CI104_18420 hypothetical protein K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D CI104_05330 rseP; sigma E protease regulator RseP K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CI104_17805 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D CI104_15985 DgsA anti-repressor MtfA K09933 mtfA; MtfA peptidase D CI104_12650 serine protease K04775 ydgD; protease YdgD [EC:3.4.21.-] D CI104_05255 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D CI104_02550 serine endoprotease DegQ K04772 degQ; serine protease DegQ [EC:3.4.21.-] D CI104_02545 serine endoprotease DegS K04691 hhoB; serine protease DegS [EC:3.4.21.-] D CI104_15285 oligopeptidase B K01354 ptrB; oligopeptidase B [EC:3.4.21.83] D CI104_07515 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CI104_16305 serine-type D-Ala-D-Ala carboxypeptidase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CI104_08620 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CI104_16775 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D CI104_06015 D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D CI104_02795 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CI104_06420 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CI104_06430 endopeptidase La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CI104_09240 Lon protease K04770 lonH; Lon-like ATP-dependent protease [EC:3.4.21.-] D CI104_23380 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CI104_11080 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D CI104_26115 peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_15030 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_27920 peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_28060 peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_11365 DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_09630 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_18825 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CI104_15210 tail-specific protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D CI104_11700 signal peptide peptidase SppA K04773 sppA; protease IV [EC:3.4.21.-] D CI104_26005 S49 family peptidase K04773 sppA; protease IV [EC:3.4.21.-] D CI104_14115 protease SohB K04774 sohB; serine protease SohB [EC:3.4.21.-] D CI104_11165 capsid assembly protein K21511 C; Enterobacteria phage capsid assembly protease [EC:3.4.21.-] D CI104_23590 dipeptidase PepE K05995 pepE; dipeptidase E [EC:3.4.13.21] D CI104_01605 rhomboid protease GlpG K02441 glpG; rhomboid protease GlpG [EC:3.4.21.105] D CI104_14615 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CI104_24105 ATP-dependent protease subunit HslV K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D CI104_08570 beta-aspartyl-peptidase K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5] D CI104_01500 gamma-glutamyltransferase K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13] D CI104_16635 U32 family peptidase K08303 prtC; U32 family peptidase [EC:3.4.-.-] D CI104_13445 collagenase-like protease K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D CI104_02940 U32 family peptidase K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D CI104_02945 protease K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D CI104_22215 metalloprotease PmbA K03592 pmbA; PmbA protein D CI104_02495 metalloprotease TldD K03568 tldD; TldD protein D CI104_17185 ecotin K08276 eco; ecotin D CI104_18570 hypothetical protein K06894 yfhM; alpha-2-macroglobulin D CI104_22520 protease modulator HflC K04087 hflC; modulator of FtsH protease HflC D CI104_22525 protease modulator HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:cfar01003] D CI104_08530 hypothetical protein K08256 pimA; phosphatidyl-myo-inositol alpha-mannosyltransferase [EC:2.4.1.345] D CI104_01560 glycogen synthase GlgA K00703 glgA; starch synthase [EC:2.4.1.21] D CI104_01050 bcsA; UDP-forming cellulose synthase catalytic subunit K00694 bcsA; cellulose synthase (UDP-forming) [EC:2.4.1.12] D CI104_02665 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CI104_18565 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D CI104_05195 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D CI104_01760 carboxypeptidase/penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CI104_16525 wcaE; colanic acid biosynthesis glycosyltransferase WcaE K13683 wcaE; putative colanic acid biosynthesis glycosyltransferase WcaE [EC:2.4.-.-] D CI104_16535 wcaC; colanic acid biosynthesis glycosyltransferase WcaC K13684 wcaC; putative colanic acid biosynthesis glycosyltransferase WcaC [EC:2.4.-.-] D CI104_24870 lipopolysaccharide N-acetylmannosaminouronosyltransferase K02852 wecG; UDP-N-acetyl-D-mannosaminouronate:lipid I N-acetyl-D-mannosaminouronosyltransferase [EC:2.4.1.180] D CI104_24880 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase K12582 wecF; dTDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [EC:2.4.1.325] D CI104_24925 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] D CI104_10300 glucan biosynthesis glucosyltransferase H K03669 mdoH; membrane glycosyltransferase [EC:2.4.1.-] D CI104_15570 trehalose-6-phosphate synthase K00697 otsA; trehalose 6-phosphate synthase [EC:2.4.1.15 2.4.1.347] D CI104_16470 wcaL; colanic acid biosynthesis glycosyltransferase WcaL K16703 wcaL; colanic acid/amylovoran/stewartan biosynthesis glycosyltransferase WcaL/AmsK/CpsK [EC:2.4.-.-] C 01005 Lipopolysaccharide biosynthesis proteins [BR:cfar01005] D CI104_05355 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CI104_05360 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CI104_04930 UDP-3-O-acyl-N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CI104_05345 lpxD; UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CI104_06980 lpxH; UDP-2,3-diacylglucosamine diphosphatase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D CI104_09065 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CI104_10325 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CI104_15335 msbB; lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase K02560 lpxM; lauroyl-Kdo2-lipid IVA myristoyltransferase [EC:2.3.1.243] D CI104_17940 lipid A biosynthesis palmitoleoyl acyltransferase K12974 lpxP; KDO2-lipid IV(A) palmitoleoyltransferase [EC:2.3.1.242] D CI104_17000 phosphatase PAP2 family protein K19803 lpxT; Kdo2-lipid A phosphotransferase [EC:2.7.4.29] D CI104_00540 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CI104_17420 lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase K07264 arnT; 4-amino-4-deoxy-L-arabinose transferase [EC:2.4.2.43] D CI104_07470 pagP; phospholipid:lipid A palmitoyltransferase K12973 pagP; lipid IVA palmitoyltransferase [EC:2.3.1.251] D CI104_23015 phosphoethanolamine transferase EptA K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D CI104_26315 phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D CI104_00950 kdo(2)-lipid A phosphoethanolamine 7''-transferase K12975 eptB; KDO II ethanolaminephosphotransferase [EC:2.7.8.42] D CI104_14415 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CI104_09080 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CI104_02715 3-deoxy-manno-octulosonate-8-phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D CI104_02720 arabinose-5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CI104_00565 glycosyl transferase K02840 waaB; UDP-D-galactose:(glucosyl)LPS alpha-1,6-D-galactosyltransferase [EC:2.4.1.-] D CI104_00600 lipopolysaccharide heptosyltransferase RfaC K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D CI104_00605 ADP-heptose--LPS heptosyltransferase RfaF K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D CI104_00550 glycosyltransferase family 1 protein K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D CI104_00625 glycosyltransferase K19354 waaH; heptose III glucuronosyltransferase [EC:2.4.1.-] D CI104_00560 UDP-glucose--glucosyl LPS a 1,2-glucosyltransferase K24623 waaH; UDP-glucose:(glucosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.-] D CI104_00570 lipopolysaccharide 3-alpha-galactosyltransferase K03278 waaI; UDP-D-galactose:(glucosyl)LPS alpha-1,3-D-galactosyltransferase [EC:2.4.1.44] D CI104_00575 lipopolysaccharide 1,2-glucosyltransferase K03279 waaJ; UDP-glucose:(galactosyl)LPS alpha-1,2-glucosyltransferase [EC:2.4.1.58] D CI104_00595 ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26] D CI104_00555 lipopolysaccharide core heptose(I) kinase RfaP K02848 waaP; lipopolysaccharide core heptose(I) kinase [EC:2.7.1.235] D CI104_00545 lipopolysaccharide core heptosyltransferase RfaQ K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D CI104_00590 lipopolysaccharide 1,2-N-acetylglucosaminetransferase K03277 waaU; heptosyltransferase IV [EC:2.4.-.-] D CI104_00580 heptose kinase K02850 waaY; heptose II phosphotransferase [EC:2.7.1.-] D CI104_00585 waaZ; 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ K12981 waaZ; KDO transferase III [EC:2.4.99.-] D CI104_23980 hypothetical protein K19353 eptC; heptose-I-phosphate ethanolaminephosphotransferase [EC:2.7.8.-] D CI104_05715 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D CI104_05455 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D CI104_03780 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70] D CI104_00610 ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D CI104_24875 O-antigen assembly polymerase K02853 wzyE; enterobacterial common antigen polymerase [EC:2.4.99.27] D CI104_16385 LPS O-antigen chain length determinant protein WzzB K05789 wzzB; chain length determinant protein (polysaccharide antigen chain regulator) D CI104_17095 glycosyltransferase K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D CI104_24925 UDP-N-acetylglucosamine--undecaprenyl-phosphate N-acetylglucosaminephosphotransferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cfar01011] D CI104_02760 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CI104_23850 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CI104_04905 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D CI104_04890 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CI104_04875 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CI104_04910 ddl; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CI104_06045 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CI104_14625 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CI104_23335 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1] D CI104_23880 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D CI104_14615 muramoyltetrapeptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13] D CI104_04885 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CI104_04900 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CI104_03750 undecaprenyl-diphosphate phosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D CI104_08630 undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D CI104_10400 mviN; lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CI104_01760 carboxypeptidase/penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D CI104_05195 mrcB; penicillin-binding protein 1B K05365 mrcB; penicillin-binding protein 1B [EC:2.4.99.28 3.4.16.4] D CI104_18565 penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D CI104_07530 penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D CI104_04870 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CI104_15160 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CI104_07515 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CI104_16305 serine-type D-Ala-D-Ala carboxypeptidase DacD K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CI104_08620 serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CI104_02795 serine-type D-Ala-D-Ala carboxypeptidase K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D CI104_06015 D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH K18988 ampH; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase [EC:3.4.16.4 3.4.21.-] D CI104_16775 D-alanyl-D-alanine endopeptidase K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D CI104_02665 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D CI104_16070 L,D-transpeptidase K16291 erfK; L,D-transpeptidase ErfK/SrfK D CI104_12160 murein L,D-transpeptidase K19234 ynhG; L,D-transpeptidase YnhG D CI104_08515 L,D-transpeptidase K19235 ybiS; L,D-transpeptidase YbiS D CI104_10900 L,D-transpeptidase K19236 ycfS; L,D-transpeptidase YcfS D CI104_09120 L,D-transpeptidase K21470 ycbB; L,D-transpeptidase YcbB D CI104_13075 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CI104_17805 penicillin-insensitive murein endopeptidase K07261 mepA; penicillin-insensitive murein DD-endopeptidase [EC:3.4.24.-] D CI104_12380 peptidoglycan endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D CI104_05730 endopeptidase K19303 mepH; murein DD-endopeptidase [EC:3.4.-.-] D CI104_13720 hypothetical protein K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CI104_17010 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase K13694 mepS; murein DD-endopeptidase / murein LD-carboxypeptidase [EC:3.4.-.- 3.4.17.13] D CI104_15340 murein DD-endopeptidase MepM K19304 mepM; murein DD-endopeptidase [EC:3.4.24.-] D CI104_04400 murein transglycosylase K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CI104_20275 murein transglycosylase A K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D CI104_19710 murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D CI104_04135 membrane-bound lytic murein transglycosylase MltC K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29] D CI104_05510 murein transglycosylase D K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D CI104_14610 emtA; membrane-bound lytic murein transglycosylase EmtA K08308 mltE; peptidoglycan lytic transglycosylase E [EC:4.2.2.29] D CI104_18760 membrane-bound lytic murein transglycosylase MltF K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D CI104_10555 cell division protein YceG K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D CI104_07520 endolytic peptidoglycan transglycosylase RlpA K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D CI104_20295 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_18215 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_22550 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_08775 N-acetylmuramoyl-L-alanine amidase K11066 amiD; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_04990 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_12165 murein lipoprotein K06078 lpp; murein lipoprotein C 01004 Lipid biosynthesis proteins [BR:cfar01004] D CI104_10530 fabD; [acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CI104_10525 ketoacyl-ACP synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CI104_01275 beta-ketoacyl-[acyl-carrier-protein] synthase II K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CI104_17780 beta-ketoacyl-[acyl-carrier-protein] synthase I K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D CI104_01260 beta-ketoacyl-ACP synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CI104_22840 3-oxoacyl-ACP synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CI104_10545 beta-ketoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CI104_01265 3-oxoacyl-ACP reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_22825 3-oxoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_10535 fabG; beta-ketoacyl-ACP reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_20765 NAD(P)-dependent oxidoreductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CI104_09235 beta-hydroxydecanoyl-ACP dehydratase K01716 fabA; 3-hydroxyacyl-[acyl-carrier protein] dehydratase / trans-2-decenoyl-[acyl-carrier protein] isomerase [EC:4.2.1.59 5.3.3.14] D CI104_05350 fabZ; beta-hydroxyacyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CI104_14025 enoyl-ACP reductase FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CI104_06940 arylesterase K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D CI104_06500 acyl-CoA thioesterase II K10805 tesB; acyl-CoA thioesterase II [EC:3.1.2.-] D CI104_14225 acyl-CoA thioesterase K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D CI104_06450 thioesterase K12500 tesC; thioesterase III [EC:3.1.2.-] D CI104_23215 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D CI104_05905 prpE; propionate--CoA ligase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D CI104_12020 cyclohexanecarboxylate-CoA ligase K12507 fadK; acyl-CoA synthetase [EC:6.2.1.-] D CI104_15065 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CI104_09955 acyl-CoA synthetase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D CI104_23390 glycerol-3-phosphate 1-O-acyltransferase PlsB K00631 plsB; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CI104_10520 phosphate acetyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CI104_03740 glycerol-3-phosphate 1-O-acyltransferase PlsY K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D CI104_03915 1-acylglycerol-3-phosphate O-acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:cfar01008] D CI104_07340 isochorismatase K01252 entB; bifunctional isochorismate lyase / aryl carrier protein [EC:3.3.2.1 6.3.2.14] D CI104_07270 enterobactin synthase subunit EntD K02362 entD; enterobactin synthetase component D [EC:6.3.2.14 2.7.8.-] D CI104_07335 entE; 2,3-dihydroxybenzoate-AMP ligase K02363 entE; 2,3-dihydroxybenzoate---[aryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.71] D CI104_07295 entF; enterobactin synthase subunit F K02364 entF; L-serine---[L-seryl-carrier protein] ligase [EC:6.3.2.14 6.2.1.72] D CI104_07350 proofreading thioesterase EntH K24147 entH; proofreading thioesterase EntH D CI104_20750 aspartate racemase K01779 racD; aspartate racemase [EC:5.1.1.13] D CI104_20840 aspartate/glutamate racemase family protein K01779 racD; aspartate racemase [EC:5.1.1.13] C 01006 Prenyltransferases [BR:cfar01006] D CI104_06305 (2E,6E)-farnesyl diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D CI104_02770 octaprenyl diphosphate synthase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D CI104_05320 (2E,6E)-farnesyl-diphosphate-specific ditrans,polycis-undecaprenyl-diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CI104_22540 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CI104_24115 1,4-dihydroxy-2-naphthoate polyprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D CI104_23395 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CI104_06370 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:cfar01007] D CI104_18040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CI104_07710 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CI104_05170 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D CI104_12470 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CI104_01820 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CI104_06990 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CI104_15425 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CI104_16705 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CI104_04545 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CI104_21995 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CI104_07570 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CI104_20995 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CI104_15385 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CI104_09150 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CI104_18540 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CI104_00860 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CI104_00865 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CI104_08935 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CI104_05425 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CI104_11935 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CI104_19690 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CI104_11955 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CI104_11960 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CI104_09135 aspartate/tyrosine/aromatic aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CI104_00795 valine--pyruvate transaminase K00835 avtA; valine--pyruvate aminotransferase [EC:2.6.1.66] D CI104_17560 pyridoxal phosphate-dependent aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D CI104_17945 alanine transaminase K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-] D CI104_23330 aspartate/tyrosine/aromatic aminotransferase K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D CI104_16355 histidinol-phosphate transaminase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D CI104_00615 kbl; glycine C-acetyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29] D CI104_09970 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CI104_08275 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CI104_12550 pyridoxal phosphate-dependent aminotransferase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D CI104_01900 aspartate aminotransferase family protein K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D CI104_11780 aspartate aminotransferase family protein K00840 astC; succinylornithine aminotransferase [EC:2.6.1.81] D CI104_19500 aspartate aminotransferase family protein K07250 gabT; 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:2.6.1.19 2.6.1.22 2.6.1.48] D CI104_01420 aspartate aminotransferase family protein K00823 puuE; 4-aminobutyrate aminotransferase [EC:2.6.1.19] D CI104_03360 ygjG; putrescine aminotransferase K09251 patA; putrescine aminotransferase [EC:2.6.1.82] D CI104_08265 adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D CI104_05220 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CI104_25005 branched chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D CI104_09025 3-phosphoserine/phosphohydroxythreonine transaminase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D CI104_17400 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K07806 arnB; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase [EC:2.6.1.87] D CI104_24890 dTDP-4-amino-4,6-dideoxygalactose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:cfar00194] D CI104_25190 atpC; ATP synthase epsilon chain K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D CI104_25185 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D CI104_25180 F0F1 ATP synthase subunit gamma K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D CI104_25175 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D CI104_25170 F0F1 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D CI104_25165 ATP synthase subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D CI104_25160 ATP synthase subunit C K02110 ATPF0C; F-type H+-transporting ATPase subunit c D CI104_25155 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CI104_25150 ATP F0F1 synthase subunit I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:cfar03000] D CI104_15955 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_26260 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_27945 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_11075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_04775 arabinose operon transcriptional regulator AraC K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein D CI104_24260 HTH-type transcriptional activator RhaR K02854 rhaR; AraC family transcriptional regulator, L-rhamnose operon transcriptional activator RhaR D CI104_24265 HTH-type transcriptional activator RhaS K02855 rhaS; AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS D CI104_11850 transcriptional regulator ChbR K03490 chbR; AraC family transcriptional regulator, dual regulator of chb operon D CI104_23005 AraC family transcriptional regulator K03755 adiY; AraC family transcriptional regulator, transcriptional activator of adiA D CI104_18225 HTH-type transcriptional regulator EutR K04033 eutR; AraC family transcriptional regulator, ethanolamine operon transcriptional activator D CI104_23285 AraC family transcriptional regulator K13631 soxS; AraC family transcriptional regulator, mar-sox-rob regulon activator D CI104_12875 MDR efflux pump AcrAB transcriptional activator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D CI104_14545 AraC family transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D CI104_04420 MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D CI104_07165 RamA family antibiotic efflux transcriptional regulator K18325 ramA; AraC family of transcriptional regulator, multidrug resistance transcriptional activator D CI104_21290 AraC family transcriptional regulator K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA D CI104_22990 transcriptional regulator MelR K23237 melR; AraC family transcriptional regulator, melibiose operon regulatory protein D CI104_11575 AraC family transcriptional regulator K25495 nimR; AraC family transcriptional regulator, regulator of nimT D CI104_16175 hypothetical protein K27259 pocR; AraC family transcriptional regulator, pdu and cob operon regulator D CI104_13460 AraC family transcriptional regulator K07506 K07506; AraC family transcriptional regulator D CI104_17215 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D CI104_12810 transcriptional regulator FtrA K13633 ftrA; AraC family transcriptional regulator, transcriptional activator FtrA D CI104_20250 transcriptional regulator GcvA K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D CI104_24985 HTH-type transcriptional activator IlvY K02521 ilvY; LysR family transcriptional regulator, positive regulator for ilvC D CI104_24730 LysR family transcriptional regulator K03576 metR; LysR family transcriptional regulator, regulator for metE and metH D CI104_04525 transcriptional activator NhaR K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D CI104_23910 DNA-binding transcriptional regulator OxyR K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D CI104_21130 transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CI104_04835 transcriptional regulator LeuO K05798 leuO; LysR family transcriptional regulator, transcriptional activator for leuABCD operon D CI104_03145 transcriptional regulator TdcA K07592 tdcA; LysR family transcriptional regulator, tdc operon transcriptional activator D CI104_04375 HTH-type transcriptional activator AllS K10972 allS; LysR family transcriptional regulator, transcriptional activator of the allD operon D CI104_17910 transcriptional regulator CynR K11921 cynR; LysR family transcriptional regulator, cyn operon transcriptional activator D CI104_14100 LysR family transcriptional regulator CysB K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D CI104_15995 cbl; transcriptional regulator Cbl K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D CI104_00130 DNA-binding transcriptional regulator DsdC K13636 dsdC; LysR family transcriptional regulator, D-serine deaminase activator D CI104_07740 LysR family transcriptional regulator K13794 tcuR; LysR family transcriptional regulator, regulatory protein for tcuABC D CI104_15050 LysR family transcriptional regulator K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D CI104_14700 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D CI104_25670 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D CI104_25700 LysR family transcriptional regulator K17850 ampR; LysR family transcriptional regulator, regulator of gene expression of beta-lactamase D CI104_16000 nitrogen assimilation transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D CI104_02840 LysR family transcriptional regulator K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D CI104_20745 LysR family transcriptional regulator K21645 hypT; LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT D CI104_02500 transcriptional regulator K21698 aaeR; LysR family transcriptional regulator, transcriptional activator for aaeXAB operon D CI104_03735 LysR family transcriptional regulator K21742 ttdR; LysR family transcriptional regulator, transcriptional activator for ttdABT operon D CI104_25035 HTH-type transcriptional regulator HdfR K23773 hdfR; LysR family transcriptional regulator, flagellar master operon regulator D CI104_08625 DNA-binding transcriptional repressor DeoR K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D CI104_00175 DeoR family transcriptional regulator K11534 deoR; DeoR family transcriptional regulator, deoxyribose operon repressor D CI104_01610 DeoR/GlpR family transcriptional regulator K02444 glpR; DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor D CI104_03075 DeoR family transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D CI104_03080 DeoR/GlpR transcriptional regulator K02081 agaR; DeoR family transcriptional regulator, aga operon transcriptional repressor D CI104_20175 transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D CI104_23945 DeoR/GlpR transcriptional regulator K02430 fucR; DeoR family transcriptional regulator, L-fucose operon activator D CI104_19740 srlR; transcriptional regulator K02468 srlR; DeoR family transcriptional regulator, glucitol operon repressor D CI104_22470 HTH-type transcriptional regulator UlaR K03477 ulaR; DeoR family transcriptional regulator, ulaG and ulaABCDEF operon transcriptional repressor D CI104_24465 DeoR/GlpR transcriptional regulator K27243 csqR; DeoR family transcriptional regulator, sulfoquinovose operon repressor D CI104_00815 xylose operon transcription regulator XylR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CI104_06885 LacI family transcriptional regulator K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CI104_20415 HTH-type transcriptional regulator GalR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CI104_25080 transcriptional regulator RbsR K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CI104_16875 HTH-type transcriptional regulator GalS K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CI104_04605 Mal regulon transcriptional regulator MalI K02529 galR; LacI family transcriptional regulator, galactose operon repressor D CI104_00915 LacI family transcriptional regulator K02525 kdgR; LacI family transcriptional regulator, kdg operon repressor D CI104_24095 DNA-binding transcriptional regulator CytR K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D CI104_07135 LacI family transcriptional regulator K05499 cytR; LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG D CI104_04850 catabolite repressor/activator K03435 fruR1; LacI family transcriptional regulator, fructose operon transcriptional repressor D CI104_20140 transcriptional regulator K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor D CI104_22120 HTH-type transcriptional regulator TreR K03485 treR; LacI family transcriptional regulator, trehalose operon repressor D CI104_19775 transcriptional regulator K03487 ascG; LacI family transcriptional regulator, asc operon repressor D CI104_12355 HTH-type transcriptional repressor PurR K03604 purR; LacI family transcriptional regulator, purine nucleotide synthesis repressor D CI104_13285 GntR family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D CI104_01520 GntR family transcriptional regulator K06145 gntR; LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor D CI104_21960 transcriptional regulator K06146 idnR; LacI family transcriptional regulator, gluconate utilization system Gnt-II transcriptional activator D CI104_12560 Mal regulon transcriptional regulator MalI K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D CI104_07015 LacI family transcriptional regulator K16136 malI; LacI family transcriptional regulator, maltose regulon regulatory protein D CI104_00090 GntR family transcriptional regulator K03482 yidP; GntR family transcriptional regulator, glv operon transcriptional regulator D CI104_23080 phosphonate metabolism transcriptional regulator PhnF K02043 phnF; GntR family transcriptional regulator, phosphonate transport system regulatory protein D CI104_08245 histidine utilization repressor K05836 hutC; GntR family transcriptional regulator, histidine utilization repressor D CI104_01825 transcriptional regulator K10711 frlR; GntR family transcriptional regulator, frlABCD operon transcriptional regulator D CI104_14550 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D CI104_00375 GntR family transcriptional regulator K03710 K03710; GntR family transcriptional regulator D CI104_14640 fatty acid metabolism transcriptional regulator FadR K03603 fadR; GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA D CI104_05005 pyruvate dehydrogenase complex transcriptional repressor PdhR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CI104_14995 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CI104_21485 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CI104_12990 FadR family transcriptional regulator K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D CI104_27315 GntR family transcriptional regulator K13637 uxuR; GntR family transcriptional regulator, uxu operon transcriptional repressor D CI104_03245 transcriptional regulator ExuR K19775 exuR; GntR family transcriptional regulator, hexuronate regulon transcriptional repressor D CI104_00690 transcriptional regulator LldR K14348 lldR; GntR family transcriptional regulator, L-lactate dehydrogenase operon regulator D CI104_00030 FadR family transcriptional regulator K19776 dgoR; GntR family transcriptional regulator, galactonate operon transcriptional repressor D CI104_02595 transcriptional regulator NanR K22104 nanR; GntR family transcriptional regulator, sialic acid-inducible nan operon repressor D CI104_19555 DNA-binding transcriptional regulator K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase D CI104_13325 colanic acid/biofilm transcriptional regulator K13654 mcbR; GntR family transcriptional regulator, colanic acid and biofilm gene transcriptional regulator D CI104_19510 transcriptional regulator K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D CI104_12785 GntR family transcriptional regulator K22293 rspR; GntR family transcriptional regulator, rspAB operon transcriptional repressor D CI104_21340 GntR family transcriptional regulator K23015 lgoR; GntR family transcriptional regulator, transcriptional activator for L-galactonate catabolism D CI104_27425 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D CI104_25775 TetR family transcriptional regulator K18476 tetR; TetR/AcrR family transcriptional regulator, tetracycline repressor protein D CI104_07195 transcriptional regulator BetI K02167 betI; TetR/AcrR family transcriptional regulator, transcriptional repressor of bet genes D CI104_06585 DNA-binding transcriptional repressor AcrR K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D CI104_00500 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D CI104_10165 pyrimidine utilization regulatory protein R K09017 rutR; TetR/AcrR family transcriptional regulator D CI104_12410 TetR/AcrR family transcriptional regulator K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D CI104_27280 TetR/AcrR family transcriptional regulator K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon D CI104_26730 TetR/AcrR family transcriptional regulator K19060 mphR; TetR/AcrR family transcriptional regulator, macrolide resistance operon repressor D CI104_10890 TetR/AcrR family transcriptional regulator K22041 comR; TetR/AcrR family transcriptional regulator, copper-responsive repressor D CI104_23900 HTH-type transcriptional repressor FabR K22105 fabR; TetR/AcrR family transcriptional regulator, fatty acid biosynthesis regulator D CI104_08375 transcriptional regulator K23777 cecR; TetR/AcrR family transcriptional regulator, regulator of cefoperazone and chloramphenicol sensitivity D CI104_08650 DNA-binding transcriptional regulator K23778 rcdA; TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response D CI104_25130 transcriptional regulator AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA D CI104_08915 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CI104_06475 Lrp/AsnC family transcriptional regulator K05800 decR; Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator D CI104_15765 transcriptional regulator SdiA K07782 sdiA; LuxR family transcriptional regulator, quorum-sensing system regulator SdiA D CI104_20665 LuxR family transcriptional regulator K19734 expR; LuxR family transcriptional regulator, quorum-sensing system regulator ExpR D CI104_15910 rcsA; helix-turn-helix transcriptional regulator K07781 rcsA; LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor D CI104_10250 helix-turn-helix transcriptional regulator K04333 csgD; LuxR family transcriptional regulator, csgAB operon transcriptional regulatory protein D CI104_21280 helix-turn-helix transcriptional regulator K22650 bglJ; LuxR family transcriptional regulator, regulator of transport and utilization of aryl beta-glucosides D CI104_01650 HTH-type transcriptional regulator MalT K03556 malT; LuxR family transcriptional regulator, maltose regulon positive regulatory protein D CI104_12880 transcriptional regulator K03712 marR; MarR family transcriptional regulator, multiple antibiotic resistance protein MarR D CI104_12445 transcriptional regulator SlyA K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D CI104_21430 MarR family transcriptional regulator K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin D CI104_19620 transcriptional repressor MprA K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB D CI104_19915 MarR family transcriptional regulator K22489 hosA; MarR family transcriptional regulator, temperature-dependent positive regulator of motility D CI104_26585 merR; Hg(II)-responsive transcriptional regulator K08365 merR; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D CI104_28655 merD; transcriptional regulator K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D CI104_26610 merD; transcriptional regulator K19057 merD; MerR family transcriptional regulator, mercuric resistance operon regulatory protein D CI104_06895 cueR; HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D CI104_02185 heavy metal-responsive transcriptional regulator K13638 zntR; MerR family transcriptional regulator, Zn(II)-responsive regulator of zntA D CI104_23280 redox-sensitive transcriptional activator SoxR K13639 soxR; MerR family transcriptional regulator, redox-sensitive transcriptional activator SoxR D CI104_16730 transcriptional regulator K21089 mlrA; MerR family transcriptional regulator, activator of the csg genes D CI104_11430 helix-turn-helix-type transcriptional regulator K21972 bluR; MerR family transcriptional regulator, repressor of blue light- and temperature-responsive genes D CI104_07745 transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D CI104_23365 transcriptional repressor K09823 zur; Fur family transcriptional regulator, zinc uptake regulator D CI104_23605 acetate operon transcriptional repressor IclR K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D CI104_10020 IclR family transcriptional regulator K13641 iclR; IclR family transcriptional regulator, acetate operon repressor D CI104_13810 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D CI104_13210 IclR family transcriptional regulator K02624 pcaR; IclR family transcriptional regulator, pca regulon regulatory protein D CI104_15195 DNA-binding transcriptional regulator KdgR K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D CI104_21655 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D CI104_09815 IclR family transcriptional regulator K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor D CI104_01910 cAMP-activated global transcriptional regulator CRP K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CI104_24970 Crp/Fnr family transcriptional regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D CI104_13825 transcriptional regulator FNR K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D CI104_05835 transcriptional regulator K16326 yeiL; CRP/FNR family transcriptional regulator, putaive post-exponential-phase nitrogen-starvation regulator D CI104_18625 iscR; Fe-S cluster assembly transcriptional regulator IscR K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CI104_09340 transcriptional regulator K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D CI104_22505 HTH-type transcriptional repressor NsrR K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D CI104_14530 transcriptional regulator K19587 oqxR; Rrf2 family transcriptional regulator, repressor of oqxAB D CI104_20870 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CI104_26190 transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D CI104_13450 XRE family transcriptional regulator K23779 sutR; XRE family transcriptional regulator, regulator of sulfur utilization D CI104_26820 PadR family transcriptional regulator K10947 K10947; PadR family transcriptional regulator D CI104_08495 transcriptional regulator MntR K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator D CI104_15325 transcriptional regulator HexR K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D CI104_20030 MurR/RpiR family transcriptional regulator K19337 hexR; RpiR family transcriptional regulator, carbohydrate utilization regulator D CI104_23845 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CI104_02350 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CI104_04405 trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D CI104_05885 propionate catabolism operon regulatory protein PrpR K02688 prpR; transcriptional regulator, propionate catabolism operon regulatory protein D CI104_02765 transcriptional regulator K07724 ner; Ner family transcriptional regulator D CI104_17765 transcriptional regulator K07724 ner; Ner family transcriptional regulator D CI104_14955 transcriptional regulator K07724 ner; Ner family transcriptional regulator D CI104_04800 transcriptional regulator SgrR K11925 sgrR; SgrR family transcriptional regulator D CI104_21140 multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22] D CI104_26670 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D CI104_13000 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D CI104_03305 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CI104_00285 transcriptional regulator K17473 dgaR; sigma-54 dependent transcriptional regulator, dga operon transcriptional activator D CI104_19750 nitric oxide reductase transcriptional regulator NorR K12266 norR; anaerobic nitric oxide reductase transcription regulator D CI104_19865 formate hydrogenlyase transcriptional activator FlhA K15836 fhlA; formate hydrogenlyase transcriptional activator D CI104_05260 carbohydrate diacid regulon transcriptional regulator CdaR K02647 cdaR; carbohydrate diacid regulator D CI104_08195 molybdenum-dependent transcriptional regulator K02019 modE; molybdate transport system regulatory protein D CI104_00880 transcriptional regulator K07726 K07726; putative transcriptional regulator D CI104_00230 transcriptional regulator K07726 K07726; putative transcriptional regulator D CI104_21825 transcriptional regulator K07727 K07727; putative transcriptional regulator D CI104_24065 met repressor K03764 metJ; MetJ family transcriptional regulator, methionine regulon repressor D CI104_10175 putA; trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88] D CI104_25905 antitoxin RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D CI104_26395 regulator K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D CI104_26355 regulator protein FrmR K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D CI104_13585 metal/formaldehyde-sensitive transcriptional repressor K23239 frmR; FrmR/RcnR family transcriptional regulator, repressor of frmRAB operon D CI104_20495 transcriptional repressor RcnR K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression D CI104_26290 transcriptional repressor RcnR K23240 rcnR; FrmR/RcnR family transcriptional regulator, repressor of rcnA expression D CI104_06405 BolA family transcriptional regulator K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D CI104_27860 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_27965 plasmid-partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_25355 peptide transporter K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_28050 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_28185 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_24670 transcription/translation regulatory transformer protein RfaH K05785 rfaH; transcriptional antiterminator RfaH D CI104_02535 arginine repressor K03402 argR; transcriptional regulator of arginine metabolism D CI104_22070 ArgR family transcriptional regulator K03402 argR; transcriptional regulator of arginine metabolism D CI104_07685 ROK family transcriptional regulator K02565 nagC; N-acetylglucosamine repressor D CI104_12675 ROK family transcriptional regulator K15545 mlc; transcriptional regulator of PTS gene D CI104_00710 mannitol operon repressor K02562 mtlR; mannitol operon repressor D CI104_13875 TyrR family transcriptional regulator K03721 tyrR; transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport D CI104_18405 glycine cleavage system transcriptional repressor K03567 gcvR; glycine cleavage system transcriptional repressor D CI104_13995 sigma-54-dependent Fis family transcriptional regulator K03974 pspF; psp operon transcriptional activator D CI104_13980 envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D CI104_21685 transcriptional regulator LsrR K11531 lsrR; lsr operon transcriptional repressor D CI104_14570 sigma-54-dependent Fis family transcriptional regulator K05880 dhaR; transcriptional activator for dhaKLM operon D CI104_07400 nucleoside diphosphate kinase regulator K06140 rnk; regulator of nucleoside diphosphate kinase D CI104_19280 hypothetical protein K07733 alpA; prophage regulatory protein D CI104_11185 hypothetical protein K07733 alpA; prophage regulatory protein D CI104_11240 AlpA family transcriptional regulator K07733 alpA; prophage regulatory protein D CI104_21795 AlpA family phage regulatory protein K07733 alpA; prophage regulatory protein D CI104_04210 DUF179 domain-containing protein K07735 algH; putative transcriptional regulator D CI104_04625 CaiF/GrlA family transcriptional regulator K08277 caiF; transcriptional activator CaiF D CI104_05175 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CI104_06265 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR D CI104_05770 Crl family RNA polymerase assembly factor K11926 crl; sigma factor-binding protein Crl D CI104_23495 transcriptional regulator K14414 rtcR; transcriptional regulatory protein RtcR D CI104_11050 hypothetical protein K22302 dicC; transcriptional repressor of cell division inhibition gene dicB D CI104_04855 division/cell wall cluster transcriptional repressor MraZ K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:cfar03021] D CI104_02170 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CI104_23765 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CI104_23760 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CI104_00460 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CI104_03660 RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor D CI104_19460 RNA polymerase subunit sigma K03086 rpoD; RNA polymerase primary sigma factor D CI104_19920 RNA polymerase sigma factor RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D CI104_18850 rpoE; ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CI104_27220 RNA polymerase subunit sigma-70 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D CI104_01415 rpoH; RNA polymerase sigma factor RpoH K03089 rpoH; RNA polymerase sigma-32 factor D CI104_02695 RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor D CI104_15795 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CI104_21865 helicase SNF2 K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D CI104_04750 RNA polymerase-associated protein RapA K03580 hepA; ATP-dependent helicase HepA [EC:5.6.2.-] D CI104_02890 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CI104_06280 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CI104_23795 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CI104_02585 stringent starvation protein A K03599 sspA; stringent starvation protein A D CI104_02590 stringent starvation protein B K03600 sspB; stringent starvation protein B D CI104_18845 anti-sigma-E factor RseA K03597 rseA; sigma-E factor negative regulatory protein RseA D CI104_18840 sigma-E factor regulatory protein RseB K03598 rseB; sigma-E factor negative regulatory protein RseB D CI104_18835 SoxR reducing system protein RseC K03803 rseC; sigma-E factor negative regulatory protein RseC D CI104_05175 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CI104_02800 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA D CI104_01715 greB; transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D CI104_24930 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CI104_05395 Rho-binding antiterminator K19000 rof; Rho-binding antiterminator C 03019 Messenger RNA biogenesis [BR:cfar03019] D CI104_10490 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CI104_02485 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D CI104_18815 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CI104_22500 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CI104_22585 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CI104_24945 ATP-dependent RNA helicase RhlB K03732 rhlB; ATP-dependent RNA helicase RhlB [EC:5.6.2.7] D CI104_08380 ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D CI104_02925 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CI104_24760 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CI104_21870 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CI104_20035 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CI104_02915 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CI104_24930 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CI104_24210 pfkA; 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_24365 permease K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CI104_04510 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CI104_22685 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CI104_22535 RNA-binding protein Hfq K03666 hfq; host factor-I protein D CI104_18480 ppk1; polyphosphate kinase 1 K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D CI104_05165 polynucleotide adenylyltransferase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CI104_20365 RNA pyrophosphohydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D CI104_19685 csrA; carbon storage regulator K03563 csrA; carbon storage regulator D CI104_02450 RNase E specificity factor CsrD K18765 csrD; RNase E specificity factor CsrD D CI104_24120 rraA; ribonuclease E activity regulator RraA K02553 rraA; regulator of ribonuclease activity A D CI104_22020 ribonuclease E inhibitor RraB K09893 rraB; regulator of ribonuclease activity B D CI104_02680 RNase adaptor protein RapZ K06958 rapZ; RNase adapter protein RapZ D CI104_13635 ATP-dependent helicase K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] D CI104_05190 ATP-dependent helicase HrpB K03579 hrpB; ATP-dependent RNA helicase HrpB [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:cfar03011] D CI104_09045 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CI104_05290 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CI104_02075 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CI104_02165 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CI104_02130 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CI104_22425 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CI104_02005 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CI104_02115 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CI104_02570 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CI104_02040 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CI104_02160 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CI104_02000 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CI104_02155 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CI104_02110 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CI104_02910 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CI104_19030 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CI104_02090 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CI104_22415 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CI104_02065 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CI104_04530 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CI104_03670 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CI104_23785 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CI104_02060 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CI104_02045 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CI104_02050 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CI104_02105 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CI104_02120 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CI104_22410 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CI104_23775 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CI104_23790 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CI104_23770 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CI104_02565 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CI104_02095 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CI104_02140 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CI104_02080 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CI104_02175 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CI104_02125 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CI104_19015 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CI104_11950 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CI104_02775 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CI104_02070 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CI104_02055 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CI104_02100 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CI104_02780 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CI104_00520 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CI104_02085 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CI104_02135 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30 D CI104_24085 rpmE; 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31 D CI104_10515 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CI104_00525 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CI104_25285 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34 D CI104_11945 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CI104_02150 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CI104_06550 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CI104_17065 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25 D CI104_24605 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CI104_02275 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CI104_18935 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_25065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_24625 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_05460 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_23650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_24610 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_05470 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_23860 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_25055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_02270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:cfar03009] D CI104_18815 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CI104_22585 oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D CI104_18810 era; GTPase Era K03595 era; GTPase D CI104_02790 obgE; Obg family GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D CI104_05175 dksA; RNA polymerase-binding transcription factor DksA K06204 dksA; RNA polymerase-binding transcription factor D CI104_02890 nusA; transcription termination/antitermination protein NusA K02600 nusA; transcription termination/antitermination protein NusA D CI104_06280 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB D CI104_23795 nusG; transcription termination/antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CI104_17055 16S rRNA pseudouridine(516) synthase RsuA K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D CI104_04720 ksgA; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CI104_02205 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D CI104_21235 16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC K00564 rsmC; 16S rRNA (guanine1207-N2)-methyltransferase [EC:2.1.1.172] D CI104_01395 rsmD; 16S rRNA (guanine(966)-N(2))-methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CI104_04220 16S rRNA (uracil(1498)-N(3))-methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D CI104_15235 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178] D CI104_25145 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CI104_04860 rsmH; 16S rRNA (cytosine(1402)-N(4))-methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CI104_03005 16S rRNA (cytidine(1402)-2'-O)-methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CI104_01170 16S rRNA (guanine(1516)-N(2))-methyltransferase RsmJ K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D CI104_15155 23S rRNA (guanine(745)-N(1))-methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D CI104_22495 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D CI104_02810 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D CI104_08440 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D CI104_03290 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG K11391 rlmG; 23S rRNA (guanine1835-N2)-methyltransferase [EC:2.1.1.174] D CI104_07535 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D CI104_09300 23S rRNA (cytosine(1962)-C(5))-methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CI104_01160 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D CI104_09205 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))-methyltransferase K12297 rlmKL; 23S rRNA (guanine2069-N7)-methyltransferase / 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.264 2.1.1.173] D CI104_20240 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM K06968 rlmM; 23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186] D CI104_18555 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D CI104_20055 rumA; 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D CI104_08735 rumB; 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC K03212 rumB; 23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189] D CI104_17965 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CI104_04745 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CI104_14130 23S rRNA pseudouridylate synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CI104_10500 23S rRNA pseudouridine(955/2504/2580) synthase RluC K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CI104_18950 23S rRNA pseudouridine(1911/1915/1917) synthase RluD K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CI104_11005 23S rRNA pseudouridine(2457) synthase RluE K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D CI104_23530 23S rRNA pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D CI104_18880 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D CI104_21225 ribosomal-protein-alanine N-acetyltransferase RimI K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D CI104_10385 30S ribosomal protein S5 alanine N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267] D CI104_08700 30S ribosomal protein S6--L-glutamate ligase K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-] D CI104_13490 50S ribosomal protein L7/L12-serine acetyltransferase K03817 rimL; ribosomal-protein-serine acetyltransferase [EC:2.3.1.-] D CI104_19025 rimM; ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM D CI104_08595 30S ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D CI104_09015 30S ribosomal protein S12 methylthiotransferase accessory factor YcaO K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D CI104_02365 50S ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D CI104_17815 50S ribosomal protein L3 N(5)-glutamine methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D CI104_10970 cupin domain-containing protein K18850 ycfD; 50S ribosomal protein L16 3-hydroxylase [EC:1.14.11.47] D CI104_10490 ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] D CI104_02485 ribonuclease E/G K08301 rng; ribonuclease G [EC:3.1.26.-] D CI104_04205 Holliday junction resolvase RuvX K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CI104_13750 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D CI104_02925 DEAD/DEAH family ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D CI104_18865 ATP-dependent RNA helicase SrmB K05590 srmB; ATP-dependent RNA helicase SrmB [EC:5.6.2.7] D CI104_22590 small ribosomal subunit biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D CI104_18525 der; ribosome biogenesis GTPase Der K03977 engA; GTPase D CI104_22530 GTPase HflX K03665 hflX; GTPase D CI104_02235 L-threonylcarbamoyladenylate synthase type 1 TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CI104_00455 bifunctional GTP diphosphokinase/guanosine-3',5'-bis(diphosphate) 3'-diphosphatase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D CI104_02900 30S ribosome-binding factor RbfA K02834 rbfA; ribosome-binding factor A D CI104_02885 ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP D CI104_07025 ribosome-associated protein K14761 rlbA; ribosome-associated protein D CI104_07540 ribosome silencing factor RsfS K09710 ybeB; ribosome-associated protein D CI104_07615 rRNA maturation RNase YbeY K07042 ybeY; probable rRNA maturation factor D CI104_02805 RNA-binding protein K07574 yhbY; RNA-binding protein D CI104_00700 hypothetical protein K14762 yibL; ribosome-associated protein D CI104_22220 DUF615 domain-containing protein K09889 yjgA; ribosome-associated protein D CI104_09230 ribosome modulation factor K03812 rmf; ribosome modulation factor D CI104_02690 raiA; ribosome hibernation promoting factor K05808 hpf; ribosome hibernation promoting factor D CI104_18965 raiA; ribosomal subunit interface protein K05809 raiA; ribosome-associated inhibitor A D CI104_13110 rpsV; stationary-phase-induced ribosome-associated protein K02972 sra; stationary-phase-induced ribosome-associated protein D CI104_14520 redox-regulated ATPase YchF K06942 ychF; ribosome-binding ATPase D CI104_10510 23S rRNA accumulation protein YceD K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:cfar03016] D CI104_17480 ribonuclease BN K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CI104_03755 multifunctional CCA addition/repair protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D CI104_23480 RNA-splicing ligase RtcB K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D CI104_18040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CI104_05425 proS; proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CI104_04545 isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CI104_07570 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CI104_16705 metG; methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CI104_07710 glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D CI104_15425 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CI104_20995 lysS; lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CI104_15385 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CI104_19690 alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CI104_09150 asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22] D CI104_11935 threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CI104_08935 serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CI104_06990 cysS; cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CI104_21995 valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CI104_18540 histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CI104_11955 phenylalanine--tRNA ligase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CI104_11960 phenylalanine--tRNA ligase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CI104_12470 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CI104_01820 trpS; tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CI104_24445 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D CI104_10585 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CI104_04155 tRNA (guanosine(46)-N7)-methyltransferase TrmB K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CI104_05430 tsaA; tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO K22900 TRMO; tRNA (adenine37-N6)-methyltransferase [EC:2.1.1.-] D CI104_17735 tRNA pseudouridine(38-40) synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CI104_02905 tRNA pseudouridine(55) synthase K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CI104_19940 tRNA pseudouridine(13) synthase TruD K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27] D CI104_18620 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CI104_02235 L-threonylcarbamoyladenylate synthase type 1 TsaC K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CI104_22540 tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CI104_25265 tRNA modification GTPase K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CI104_25140 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CI104_11715 selenide, water dikinase SelD K01008 selD; selenide, water dikinase [EC:2.7.9.3] D CI104_22355 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CI104_25280 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CI104_03140 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D CI104_12395 ribonuclease T K03683 rnt; ribonuclease T [EC:3.1.13.-] D CI104_00490 ribonuclease PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D CI104_07415 ribonuclease I K01169 rna; ribonuclease I (enterobacter ribonuclease) [EC:4.6.1.21] D CI104_14035 exoribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D CI104_15060 ribonuclease D K03684 rnd; ribonuclease D [EC:3.1.13.5] D CI104_05185 RNA 2',3'-cyclic phosphodiesterase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D CI104_04395 energy-dependent translational throttle protein EttA K06020 ettA; energy-dependent translational throttle protein EttA D CI104_00860 glyQ; glycine--tRNA ligase subunit alpha K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D CI104_00865 glycine--tRNA ligase subunit beta K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D CI104_05170 tRNA glutamyl-Q(34) synthetase GluQRS K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D CI104_06685 Cys-tRNA(Pro) deacylase K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-] D CI104_21800 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D CI104_11590 YbaK/prolyl-tRNA synthetase associated domain-containing protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D CI104_09825 hypothetical protein K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-] D CI104_18765 tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CI104_23355 tRNA dihydrouridine(20/20a) synthase DusA K05539 dusA; tRNA-dihydrouridine synthase A [EC:1.-.-.-] D CI104_02355 tRNA dihydrouridine synthase DusB K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CI104_16800 tRNA dihydrouridine(16) synthase DusC K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D CI104_07625 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D CI104_15405 tRNA (cmo5U34)-methyltransferase K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-] D CI104_15410 tRNA (mo5U34)-methyltransferase K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] D CI104_04455 tRNA/rRNA methyltransferase K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D CI104_23890 trmA; tRNA (uridine(54)-C5)-methyltransferase TrmA K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D CI104_19020 trmD; tRNA (guanosine(37)-N1)-methyltransferase TrmD K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CI104_18880 tRNA/rRNA methyltransferase K03214 yfiF; RNA methyltransferase, TrmH family [EC:2.1.1.-] D CI104_00450 tRNA (guanosine(18)-2'-O)-methyltransferase TrmH K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34] D CI104_18630 tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ K15396 trmJ; tRNA (cytidine32/uridine32-2'-O)-methyltransferase [EC:2.1.1.200] D CI104_00675 tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CI104_18860 tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223] D CI104_20095 tRNA pseudouridine(65) synthase TruC K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D CI104_17965 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CI104_04745 RNA pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D CI104_10995 mnmA; tRNA 2-thiouridine(34) synthase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CI104_13745 tRNA 2-thiocytidine(32) synthetase TtcA K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CI104_01370 sulfurtransferase TusA K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D CI104_01995 sulfurtransferase complex subunit TusB K07237 tusB; tRNA 2-thiouridine synthesizing protein B D CI104_01990 sulfurtransferase complex subunit TusC K07236 tusC; tRNA 2-thiouridine synthesizing protein C D CI104_01985 sulfurtransferase complex subunit TusD K07235 tusD; tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] D CI104_09310 sulfurtransferase TusE K11179 tusE; tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] D CI104_18610 iron-sulfur cluster assembly accessory protein K13628 iscA; iron-sulfur cluster assembly protein D CI104_21035 tRNA-modifying protein YgfZ K06980 ygfZ; tRNA-modifying protein YgfZ D CI104_22015 tRNA-(ms[2]io[6]A)-hydroxylase K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69] D CI104_17785 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D CI104_06220 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D CI104_06455 7-cyano-7-deazaguanine synthase K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D CI104_21860 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CI104_20010 queD; 6-carboxytetrahydropterin synthase QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D CI104_20015 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D CI104_20110 preQ(1) synthase K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D CI104_22565 queG; epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D CI104_06960 tRNA 2-selenouridine(34) synthase MnmH K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D CI104_06225 tRNA-guanine(34) transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CI104_06315 tRNA 4-thiouridine(8) synthase ThiI K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4] D CI104_05390 tRNA lysidine(34) synthetase TilS K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CI104_18380 tRNA(Met) cytidine acetyltransferase K06957 tmcA; tRNA(Met) cytidine acetyltransferase [EC:2.3.1.193] D CI104_15075 tsaB; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D CI104_03680 tsaD; tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CI104_22555 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CI104_20270 tRNA threonylcarbamoyladenosine dehydratase K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D CI104_22500 rnr; ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1] D CI104_02915 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CI104_28685 PIN domain nuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] C 03012 Translation factors [BR:cfar03012] D CI104_14060 yciH; stress response translation initiation inhibitor YciH K03113 EIF1; translation initiation factor 1 D CI104_02895 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CI104_11940 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CI104_01940 ABC transporter ATP-binding protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D CI104_05300 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CI104_02015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CI104_23805 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CI104_02010 fusA; elongation factor G K02355 fusA; elongation factor G D CI104_00745 selenocysteinyl-tRNA-specific translation elongation factor SelB K03833 selB; selenocysteine-specific elongation factor D CI104_14435 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CI104_05310 ribosome-recycling factor K02838 frr; ribosome recycling factor D CI104_14430 prmC; protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CI104_14515 aminoacyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CI104_08880 translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CI104_16980 elongation factor P-like protein YeiP K02356 efp; elongation factor P D CI104_22660 efp; elongation factor P K02356 efp; elongation factor P D CI104_22610 elongation factor P--(R)-beta-lysine ligase K04568 epmA; elongation factor P--(R)-beta-lysine ligase [EC:6.3.1.-] D CI104_22665 epmB; EF-P beta-lysylation protein EpmB K19810 epmB; L-lysine 2,3-aminomutase [EC:5.4.3.-] D CI104_17795 elongation factor P hydroxylase K09906 epmC; elongation factor P hydroxylase [EC:1.14.-.-] D CI104_21215 prfC; peptide chain release factor 3 K02837 prfC; peptide chain release factor 3 D CI104_02190 ribosome alternative rescue factor ArfA K09890 arfA; alternative ribosome-rescue factor D CI104_05410 aminoacyl-tRNA hydrolase K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:cfar03110] D CI104_08855 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D CI104_18940 clpB; ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CI104_06425 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CI104_24110 hslU; ATP-dependent protease ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D CI104_06635 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CI104_04510 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CI104_18600 hscA; Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D CI104_16600 molecular chaperone K04046 yegD; hypothetical chaperone protein D CI104_22685 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CI104_04515 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CI104_10065 curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D CI104_04740 co-chaperone DjlA K05801 djlA; DnaJ like chaperone protein D CI104_18605 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D CI104_01735 Hsp33 family molecular chaperone HslO K04083 hslO; molecular chaperone Hsp33 D CI104_19050 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CI104_00075 heat-shock protein IbpA K04080 ibpA; molecular chaperone IbpA D CI104_00080 heat shock chaperone IbpB K04081 ibpB; molecular chaperone IbpB D CI104_01740 heat-shock protein K04762 hslR; ribosome-associated heat shock protein Hsp15 D CI104_22690 groES; co-chaperone GroES K04078 groES; chaperonin GroES D CI104_05255 serine endoprotease DegP K04771 degP; serine protease Do [EC:3.4.21.107] D CI104_02815 hflB; ATP-dependent zinc metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CI104_25155 F0F1 ATP synthase subunit A K02108 ATPF0A; F-type H+-transporting ATPase subunit a D CI104_20635 molecular chaperone FimC K07346 fimC; fimbrial chaperone protein D CI104_15515 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D CI104_11395 hypothetical protein K07346 fimC; fimbrial chaperone protein D CI104_00660 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CI104_11805 ATP-independent periplasmic protein-refolding chaperone K06006 cpxP; periplasmic protein CpxP/Spy D CI104_24220 cpxP; stress adaptor protein CpxP K06006 cpxP; periplasmic protein CpxP/Spy D CI104_23675 zraP; zinc resistance-associated protein ZraP K07803 zraP; zinc resistance-associated protein D CI104_13065 acid-resistance protein K19778 hdeB; acid stress chaperone HdeB D CI104_04050 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D CI104_25675 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D CI104_25705 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D CI104_19840 hypA; hydrogenase maturation nickel metallochaperone HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D CI104_19845 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D CI104_12705 Tat proofreading chaperone DmsD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D CI104_22925 molecular chaperone K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D CI104_01880 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CI104_06985 peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D CI104_06440 peptidylprolyl isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D CI104_01975 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D CI104_22395 peptidylprolyl isomerase K03773 fklB; FKBP-type peptidyl-prolyl cis-trans isomerase FklB [EC:5.2.1.8] D CI104_04555 peptidylprolyl isomerase K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D CI104_01965 peptidylprolyl isomerase K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D CI104_24975 peptidylprolyl isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D CI104_04730 peptidylprolyl isomerase SurA K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D CI104_24940 thiol reductase thioredoxin K03671 TXN; thioredoxin D CI104_18890 thioredoxin TrxC K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D CI104_06930 co-chaperone YbbN K05838 ybbN; putative thioredoxin D CI104_08685 GrxA family glutaredoxin K03674 grxA; glutaredoxin 1 D CI104_10375 grxB; glutaredoxin 2 K03675 grxB; glutaredoxin 2 D CI104_00655 glutaredoxin 3 K03676 grxC; glutaredoxin 3 D CI104_12385 grxD; glutaredoxin K07390 grxD; monothiol glutaredoxin D CI104_24580 thiol:disulfide interchange protein DsbA K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CI104_22870 thiol:disulfide interchange protein K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D CI104_14650 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D CI104_21010 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CI104_26085 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CI104_22720 dipZ; protein-disulfide reductase DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D CI104_17115 thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE D CI104_07375 thiol:disulfide interchange protein DsbG K03805 dsbG; thiol:disulfide interchange protein DsbG C 04131 Membrane trafficking [BR:cfar04131] D CI104_18560 nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CI104_20860 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CI104_11625 gap; aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CI104_13600 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CI104_08160 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CI104_12170 pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D CI104_15330 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CI104_06635 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system C 03051 Proteasome [BR:cfar03051] D CI104_06635 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:cfar03032] D CI104_05525 ribonuclease HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D CI104_15955 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_26260 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_27945 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_11075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_23685 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D CI104_06435 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CI104_11965 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CI104_09050 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CI104_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CI104_23340 replicative DNA helicase DnaB K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CI104_21320 DNA replication protein DnaC K02315 dnaC; DNA replication protein DnaC D CI104_03665 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CI104_23310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_28175 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CI104_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CI104_21990 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CI104_07560 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CI104_10565 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CI104_05530 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CI104_06620 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CI104_21230 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CI104_15270 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_27880 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_28120 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_05365 ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CI104_24570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CI104_00470 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CI104_18105 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CI104_12585 DNA replication terminus site-binding protein K10748 tus; DNA replication terminus site-binding protein D CI104_25540 DNA replication protein K10748 tus; DNA replication terminus site-binding protein D CI104_09400 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_27145 DNA modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_01805 adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_10710 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_06845 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_03460 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_07765 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D CI104_18450 DnaA inactivator Hda K10763 hda; DnaA-homolog protein D CI104_17300 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CI104_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CI104_03910 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CI104_03855 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CI104_14105 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CI104_11720 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:cfar03036] D CI104_15955 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_26260 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_27945 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_11075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_18815 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CI104_14305 DNA-binding transcriptional regulator H-NS K03746 hns; DNA-binding protein H-NS D CI104_19535 DNA-binding protein StpA K11685 stpA; DNA-binding protein StpA D CI104_26550 DNA-binding protein K11685 stpA; DNA-binding protein StpA D CI104_23685 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D CI104_06435 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CI104_11965 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CI104_09050 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CI104_10065 curved DNA-binding protein K05516 cbpA; curved DNA-binding protein D CI104_10060 chaperone modulator CbpM K18997 cbpM; chaperone modulatory protein CbpM D CI104_04420 MDR efflux pump AcrAB transcriptional activator RobA K05804 rob; AraC family transcriptional regulator, mar-sox-rob regulon activator D CI104_00005 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein D CI104_02990 phosphoheptose isomerase K12961 diaA; DnaA initiator-associating protein D CI104_09295 heat shock protein HspQ K11940 hspQ; heat shock protein HspQ D CI104_08465 DNA starvation/stationary phase protection protein K04047 dps; starvation-inducible DNA-binding protein D CI104_02350 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CI104_22535 RNA-binding protein Hfq K03666 hfq; host factor-I protein D CI104_21130 transcriptional regulator ArgP K05596 iciA; LysR family transcriptional regulator, chromosome initiation inhibitor D CI104_08915 leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D CI104_17070 nucleoid-associated protein YejK K06899 ndpA; nucleoid-associated protein D CI104_09115 chromosome partition protein MukB K03632 mukB; chromosome partition protein MukB D CI104_09110 condensin subunit E K03804 mukE; chromosome partition protein MukE D CI104_09105 chromosome partition protein MukF K03633 mukF; chromosome partition protein MukF D CI104_04920 cell division protein FtsA K03590 ftsA; cell division protein FtsA D CI104_19955 cell division protein FtsB K05589 ftsB; cell division protein FtsB D CI104_01405 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CI104_04870 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CI104_15160 peptidoglycan glycosyltransferase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CI104_08920 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CI104_04865 ftsL; cell division protein FtsL K03586 ftsL; cell division protein FtsL D CI104_24100 cell division protein FtsN K03591 ftsN; cell division protein FtsN D CI104_04915 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D CI104_04895 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CI104_01410 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CI104_04925 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CI104_18110 cell division protein ZipA K03528 zipA; cell division protein ZipA D CI104_21105 cell division protein ZapA K09888 zapA; cell division protein ZapA D CI104_24130 septal ring assembly protein ZapB K09892 zapB; cell division protein ZapB D CI104_09195 cell division protein ZapC K18657 zapC; cell division protein ZapC D CI104_04955 cell division protein ZapD K18778 zapD; cell division protein ZapD D CI104_02560 cell division protein ZapE K06916 zapE; cell division protein ZapE D CI104_22400 hypothetical protein K07269 ytfB; cell division protein YtfB D CI104_20295 amiC; N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_18215 N-acetylmuramoyl-L-alanine amidase AmiA K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_22550 N-acetylmuramoyl-L-alanine amidase AmiB K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CI104_06580 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CI104_14670 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CI104_14675 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CI104_14680 cell division topological specificity factor K03608 minE; cell division topological specificity factor D CI104_09255 cell division inhibitor SulA K13053 sulA; cell division inhibitor SulA D CI104_00500 nucleoid occlusion factor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D CI104_07765 replication initiation negative regulator SeqA K03645 seqA; negative modulator of initiation of replication D CI104_02465 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CI104_02470 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D CI104_02475 mreD; rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D CI104_07525 rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA D CI104_26450 ParA family protein K03496 parA; chromosome partitioning protein D CI104_27970 plasmid-partitioning protein SopA K03496 parA; chromosome partitioning protein D CI104_28045 ParA family protein K03496 parA; chromosome partitioning protein D CI104_27860 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_27965 plasmid-partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_25355 peptide transporter K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_28050 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_28185 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_03910 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CI104_03855 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CI104_25140 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CI104_25145 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D CI104_24795 xerC; tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CI104_21015 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD D CI104_16700 iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D CI104_01890 cell filamentation protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D CI104_24565 YihA family ribosome biogenesis GTP-binding protein K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:cfar03400] D CI104_13820 methylated-DNA--[protein]-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CI104_07825 deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D CI104_18875 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CI104_04145 adenine DNA glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CI104_12490 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CI104_04945 8-oxo-dGTP diphosphatase MutT K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D CI104_00505 dUTP diphosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CI104_17215 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada K10778 ada; AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase [EC:2.1.1.63] D CI104_17210 alpha-ketoglutarate-dependent dioxygenase AlkB K03919 alkB; DNA oxidative demethylase [EC:1.14.11.33] D CI104_03645 mismatch-specific DNA-glycosylase K03649 mug; double-stranded uracil-DNA glycosylase [EC:3.2.2.28] D CI104_16595 3-methyladenine DNA glycosylase 2 K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D CI104_00935 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D CI104_00530 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D CI104_07865 endonuclease VIII K05522 nei; endonuclease VIII [EC:3.2.2.- 4.2.99.18] D CI104_11775 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D CI104_16930 deoxyribonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CI104_23695 deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7] D CI104_21005 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CI104_00470 NAD-dependent DNA ligase LigB K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CI104_18105 NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CI104_24570 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7] D CI104_26365 excinuclease ABC subunit UvrA K03701 uvrA; excinuclease ABC subunit A D CI104_23315 ABC-ATPase UvrA K03701 uvrA; excinuclease ABC subunit A D CI104_26400 excinuclease ABC subunit UvrB K03702 uvrB; excinuclease ABC subunit B D CI104_08295 uvrB; excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CI104_15750 excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CI104_11815 excinuclease Cho K05984 cho; excinuclease Cho [EC:3.1.25.-] D CI104_16020 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CI104_24785 DNA helicase II K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CI104_23765 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CI104_23760 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CI104_02170 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CI104_00460 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D CI104_10905 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CI104_19895 mutS; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CI104_22545 DNA mismatch repair endonuclease MutL K03572 mutL; DNA mismatch repair protein MutL D CI104_20375 DNA mismatch repair protein MutH K03573 mutH; DNA mismatch repair protein MutH D CI104_16310 exodeoxyribonuclease I K01141 sbcB; exodeoxyribonuclease I [EC:3.1.11.1] D CI104_18510 exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CI104_06310 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CI104_15280 DNA polymerase III subunit epsilon K10857 exoX; exodeoxyribonuclease X [EC:3.1.11.-] D CI104_05370 DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CI104_00010 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CI104_21990 DNA polymerase III subunit chi K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D CI104_07560 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CI104_10565 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D CI104_05530 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CI104_06620 DNA polymerase III subunit gamma/tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CI104_21230 DNA polymerase III subunit psi K02344 holD; DNA polymerase III subunit psi [EC:2.7.7.7] D CI104_15270 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_27880 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_28120 DNA polymerase III subunit theta K02345 holE; DNA polymerase III subunit theta [EC:2.7.7.7] D CI104_23310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_28175 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_09400 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_27145 DNA modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_01805 adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_10710 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_06845 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_03460 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_15950 very short patch repair endonuclease K07458 vsr; DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] D CI104_20315 exodeoxyribonuclease V subunit beta K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CI104_20325 recC; exonuclease V subunit gamma K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CI104_20310 recD; exodeoxyribonuclease V subunit alpha K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CI104_19700 recA; DNA recombination/repair protein RecA K03553 recA; recombination protein RecA D CI104_15365 Holliday junction branch migration protein RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CI104_15360 Holliday junction branch migration DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CI104_15370 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CI104_11085 RusA family crossover junction endodeoxyribonuclease K01160 rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10] D CI104_24090 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CI104_22420 priB; primosomal replication protein N K02686 priB; primosomal replication protein N D CI104_06605 primosomal replication protein N'' K04067 priC; primosomal replication protein N'' D CI104_21315 primosomal protein DnaT K02317 dnaT; DNA replication protein DnaT D CI104_06120 exonuclease subunit SbcC K03546 sbcC; DNA repair protein SbcC/Rad50 D CI104_06125 exonuclease sbcCD subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D CI104_21145 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CI104_00015 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF D CI104_00445 DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D CI104_18805 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CI104_06630 recombination protein RecR K06187 recR; recombination protein RecR D CI104_19065 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D CI104_06110 recombination-associated protein RdgC K03554 rdgC; recombination associated protein RdgC D CI104_17060 ATP-dependent helicase K19789 radD; DNA repair protein RadD D CI104_21965 DUF853 domain-containing protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D CI104_17300 DNA topoisomerase (ATP-hydrolyzing) subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CI104_00020 gyrB; DNA topoisomerase (ATP-hydrolyzing) subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CI104_14105 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CI104_23685 DNA-binding protein HU-alpha K05787 hupA; DNA-binding protein HU-alpha D CI104_06435 DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta D CI104_09335 exodeoxyribonuclease VIII K10906 recE; exodeoxyribonuclease VIII [EC:3.1.11.-] D CI104_02350 fis; Fis family transcriptional regulator K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D CI104_11965 ihfA; integration host factor subunit alpha K04764 ihfA; integration host factor subunit alpha D CI104_09050 ihfB; integration host factor subunit beta K05788 ihfB; integration host factor subunit beta D CI104_24760 DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CI104_21870 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D CI104_14305 DNA-binding transcriptional regulator H-NS K03746 hns; DNA-binding protein H-NS D CI104_05750 DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D CI104_14990 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D CI104_28055 DNA polymerase V subunit UmuC K03502 umuC; DNA polymerase V D CI104_26110 hypothetical protein K03502 umuC; DNA polymerase V D CI104_26115 peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_15030 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_27920 peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_28060 peptidase K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_11365 DNA polymerase V K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_09630 hypothetical protein K03503 umuD; DNA polymerase V [EC:3.4.21.-] D CI104_23380 lexA; repressor LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D CI104_11080 LexA family transcriptional regulator K01356 lexA; repressor LexA [EC:3.4.21.88] D CI104_04755 DNA polymerase II K02336 polB; DNA polymerase II [EC:2.7.7.7] D CI104_10360 DNA damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I D CI104_09420 DNA damage-inducible protein I K12149 dinI; DNA-damage-inducible protein I D CI104_19695 recombination regulator RecX K03565 recX; regulatory protein D CI104_17355 ISNCY family transposase K24090 rpnE; recombination-promoting nuclease RpnE D CI104_24955 DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D CI104_09275 helD; DNA helicase IV K03658 helD; DNA helicase IV [EC:5.6.2.4] D CI104_15080 ATP-dependent DNA helicase K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CI104_08410 dinG; ATP-dependent DNA helicase DinG K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D CI104_12390 ATP-dependent helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CI104_21890 helicase K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] D CI104_19575 class 1b ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CI104_17310 ribonucleoside-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CI104_19580 nrdF; class 1b ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CI104_17315 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:cfar03029] D CI104_02895 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CI104_11940 translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CI104_05300 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CI104_02015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CI104_23805 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CI104_02010 fusA; elongation factor G K02355 fusA; elongation factor G D CI104_18810 era; GTPase Era K03595 era; GTPase D CI104_12470 tyrosine--tRNA ligase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CI104_07570 leuS; leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CI104_15385 aspS; aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CI104_15425 arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CI104_23310 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_28175 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CI104_05335 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CI104_04510 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CI104_19050 nucleotide exchange factor GrpE K03687 GRPE; molecular chaperone GrpE D CI104_22685 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CI104_22690 groES; co-chaperone GroES K04078 groES; chaperonin GroES D CI104_04515 dnaJ; molecular chaperone DnaJ K03686 dnaJ; molecular chaperone DnaJ D CI104_18620 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CI104_18605 hscB; co-chaperone HscB K04082 hscB; molecular chaperone HscB D CI104_12385 grxD; glutaredoxin K07390 grxD; monothiol glutaredoxin D CI104_16700 iron-sulfur cluster carrier protein ApbC K03593 mrp; ATP-binding protein involved in chromosome partitioning D CI104_06370 protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D CI104_25270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CI104_06635 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:cfar02000] D CI104_09060 lipid A ABC transporter ATP-binding protein/permease MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D CI104_06480 multidrug ABC transporter permease/ATP-binding protein K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump D CI104_06485 multidrug ABC transporter permease/ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump D CI104_27455 peptidase C39 K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D CI104_19235 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D CI104_08895 amino acid ABC transporter ATP-binding protein K16012 cydC; ATP-binding cassette, subfamily C, bacterial CydC D CI104_08900 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD K16013 cydD; ATP-binding cassette, subfamily C, bacterial CydD D CI104_22850 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D CI104_08840 MacB family efflux pump subunit K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-] D CI104_17205 multidrug ABC transporter permease/ATP-binding protein K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein D CI104_09210 ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein D CI104_18185 sulfate ABC transporter substrate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D CI104_24205 sulfate ABC transporter substrate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D CI104_18180 cysT; sulfate/thiosulfate ABC transporter permease CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D CI104_18175 cysW; sulfate ABC transporter permease subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D CI104_18170 sulfate/thiosulfate ABC transporter ATP-binding protein CysA K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D CI104_08205 molybdate ABC transporter substrate-binding protein K02020 modA; molybdate transport system substrate-binding protein D CI104_08210 modB; molybdate ABC transporter permease subunit K02018 modB; molybdate transport system permease protein D CI104_08215 molybdenum ABC transporter ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D CI104_08190 molybdate ABC transporter ATP-binding protein ModF K05776 modF; molybdate transport system ATP-binding protein D CI104_05975 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CI104_20835 taurine ABC transporter substrate-binding protein K15551 tauA; taurine transport system substrate-binding protein D CI104_05985 taurine transporter subunit K15552 tauC; taurine transport system permease protein D CI104_20830 ABC transporter permease K15552 tauC; taurine transport system permease protein D CI104_05980 tauB; taurine transporter ATP-binding subunit K10831 tauB; taurine transport system ATP-binding protein [EC:7.6.2.7] D CI104_09180 aliphatic sulfonate ABC transporter substrate-binding protein K15553 ssuA; sulfonate transport system substrate-binding protein D CI104_09170 ssuC; alkanesulfonate transporter permease subunit K15554 ssuC; sulfonate transport system permease protein D CI104_09165 aliphatic sulfonates ABC transporter ATP-binding protein K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14] D CI104_05950 hypothetical protein K02012 afuA; iron(III) transport system substrate-binding protein D CI104_05945 iron ABC transporter permease K02011 afuB; iron(III) transport system permease protein D CI104_05940 fbpC; ABC transporter ATP-binding protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D CI104_04795 thiamine ABC transporter substrate binding subunit K02064 thiB; thiamine transport system substrate-binding protein D CI104_04790 thiP; thiamine/thiamine pyrophosphate ABC transporter permease ThiP K02063 thiP; thiamine transport system permease protein D CI104_04785 thiamine ABC transporter ATP-binding protein ThiQ K02062 thiQ; thiamine transport system ATP-binding protein [EC:7.6.2.15] D CI104_10940 spermidine/putrescine ABC transporter substrate-binding protein PotD K11069 potD; spermidine/putrescine transport system substrate-binding protein D CI104_10945 spermidine/putrescine ABC transporter permease PotC K11070 potC; spermidine/putrescine transport system permease protein D CI104_10950 spermidine/putrescine ABC transporter permease PotB K11071 potB; spermidine/putrescine transport system permease protein D CI104_10955 spermidine/putrescine ABC transporter ATP-binding protein PotA K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11] D CI104_08710 spermidine/putrescine ABC transporter substrate-binding protein PotF K11073 potF; putrescine transport system substrate-binding protein D CI104_08725 putrescine ABC transporter permease PotI K11074 potI; putrescine transport system permease protein D CI104_08720 putrescine ABC transporter permease PotH K11075 potH; putrescine transport system permease protein D CI104_08715 potG; polyamine ABC transporter ATP-binding protein K11076 potG; putrescine transport system ATP-binding protein [EC:7.6.2.16] D CI104_13410 spermidine/putrescine ABC transporter substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein D CI104_13395 spermidine/putrescine ABC transporter permease K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein D CI104_13400 spermidine/putrescine ABC transporter permease K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein D CI104_13405 ABC transporter ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein D CI104_19600 proline/glycine betaine ABC transporter substrate-binding protein ProX K02002 proX; glycine betaine/proline transport system substrate-binding protein D CI104_19595 proline/glycine betaine ABC transporter permease ProW K02001 proW; glycine betaine/proline transport system permease protein D CI104_19590 glycine betaine/L-proline ABC transporter ATP-binding protein K02000 proV; glycine betaine/proline transport system ATP-binding protein [EC:7.6.2.9] D CI104_16755 ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CI104_12695 glycine/betaine ABC transporter substrate-binding protein K05845 opuC; osmoprotectant transport system substrate-binding protein D CI104_16740 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D CI104_16750 osmoprotectant uptake system permease K05846 opuBD; osmoprotectant transport system permease protein D CI104_12690 choline ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CI104_12700 glycine/betaine ABC transporter permease K05846 opuBD; osmoprotectant transport system permease protein D CI104_12685 glycine/betaine ABC transporter ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CI104_16745 ATP-binding protein K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9] D CI104_11765 ABC transporter substrate-binding protein K05777 ynjB; putative thiamine transport system substrate-binding protein D CI104_11760 thiamine ABC transporter permease K05778 ynjC; putative thiamine transport system permease protein D CI104_11755 sulfate ABC transporter ATP-binding protein K05779 ynjD; putative thiamine transport system ATP-binding protein D CI104_20825 ABC transporter ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CI104_23425 maltose/maltodextrin ABC transporter substrate-binding protein MalE K10108 malE; maltose/maltodextrin transport system substrate-binding protein D CI104_23430 maltose ABC transporter permease MalF K10109 malF; maltose/maltodextrin transport system permease protein D CI104_23435 malG; maltose ABC transporter permease MalG K10110 malG; maltose/maltodextrin transport system permease protein D CI104_03315 ABC transporter ATP-binding protein K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_23420 maltose/maltodextrin ABC transporter ATP-binding protein MalK K10111 malK; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_03095 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_13925 ABC transporter ATP-binding protein K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_15590 arabinose ABC transporter substrate-binding protein K10537 araF; L-arabinose transport system substrate-binding protein D CI104_15580 araH; L-arabinose ABC transporter permease AraH K10538 araH; L-arabinose transport system permease protein D CI104_15585 araG; L-arabinose ABC transporter ATP-binding protein AraG K10539 araG; L-arabinose transport system ATP-binding protein [EC:7.5.2.12] D CI104_16870 galactose/glucose ABC transporter substrate-binding protein MglB K10540 mglB; methyl-galactoside transport system substrate-binding protein D CI104_16860 galactose/methyl galactoside ABC transporter permease MglC K10541 mglC; methyl-galactoside transport system permease protein D CI104_16865 galactose/methyl galactoside ABC transporter ATP-binding protein MglA K10542 mglA; methyl-galactoside transport system ATP-binding protein [EC:7.5.2.11] D CI104_00830 xylF; D-xylose ABC transporter substrate-binding protein K10543 xylF; D-xylose transport system substrate-binding protein D CI104_00820 sugar ABC transporter permease K10544 xylH; D-xylose transport system permease protein D CI104_00825 D-xylose ABC transporter ATP-binding protein K10545 xylG; D-xylose transport system ATP-binding protein [EC:7.5.2.10] D CI104_24285 rhaS; rhamnose ABC transporter substrate-binding protein K10559 rhaS; rhamnose transport system substrate-binding protein D CI104_24295 ABC transporter permease K10560 rhaP; rhamnose transport system permease protein D CI104_24300 ABC transporter permease K10561 rhaQ; rhamnose transport system permease protein D CI104_24290 sugar ABC transporter ATP-binding protein K10562 rhaT; rhamnose transport system ATP-binding protein [EC:7.5.2.-] D CI104_20145 LacI family transcriptional regulator K10439 rbsB; ribose transport system substrate-binding protein D CI104_25090 D-ribose ABC transporter substrate-binding protein K10439 rbsB; ribose transport system substrate-binding protein D CI104_02395 sugar ABC transporter K10439 rbsB; ribose transport system substrate-binding protein D CI104_20150 ABC transporter permease K10440 rbsC; ribose transport system permease protein D CI104_25095 ribose ABC transporter permease K10440 rbsC; ribose transport system permease protein D CI104_02405 ABC transporter permease K10440 rbsC; ribose transport system permease protein D CI104_02400 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CI104_20155 sugar ABC transporter ATP-binding protein K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CI104_25100 ribose ABC transporter ATP-binding protein RbsA K10441 rbsA; ribose transport system ATP-binding protein [EC:7.5.2.7] D CI104_22275 sugar ABC transporter substrate-binding protein K23508 ytfQ; galactofuranose transport system substrate-binding protein D CI104_22260 sugar ABC transporter permease YjfF K23509 ytfT; galactofuranose transport system permease protein D CI104_22265 sugar ABC transporter permease K23509 ytfT; galactofuranose transport system permease protein D CI104_22270 sugar ABC transporter ATP-binding protein K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9] D CI104_07245 ABC transporter substrate-binding protein K17202 eryG; erythritol transport system substrate-binding protein D CI104_07230 ABC transporter permease K17203 eryF; erythritol transport system permease protein D CI104_07235 sugar ABC transporter ATP-binding protein K17204 eryE; erythritol transport system ATP-binding protein D CI104_01470 sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein D CI104_01475 sn-glycerol-3-phosphate ABC transporter permease UgpA K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein D CI104_01480 sn-glycerol-3-phosphate ABC transporter permease UgpE K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein D CI104_01485 ugpC; sn-glycerol-3-phosphate import ATP-binding protein UgpC K05816 ugpC; sn-glycerol 3-phosphate transport system ATP-binding protein [EC:7.6.2.10] D CI104_06925 iron export ABC transporter permease subunit FetB K02069 STAR2; UDP-glucose/iron transport system permease protein D CI104_06920 iron ABC transporter ATP-binding protein FetA K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein D CI104_21705 autoinducer 2 ABC transporter substrate-binding protein K10555 lsrB; AI-2 transport system substrate-binding protein D CI104_21695 autoinducer 2 ABC transporter permease LsrC K10556 lsrC; AI-2 transport system permease protein D CI104_21700 autoinducer 2 ABC transporter permease LsrD K10557 lsrD; AI-2 transport system permease protein D CI104_21690 autoinducer 2 ABC transporter ATP-binding protein LsrA K10558 lsrA; AI-2 transport system ATP-binding protein D CI104_02740 mlaD; outer membrane lipid asymmetry maintenance protein MlaD K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D CI104_02735 phospholipid ABC transporter permease K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D CI104_02730 ABC transporter ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D CI104_02745 phospholipid-binding protein MlaC K07323 mlaC; phospholipid transport system substrate-binding protein D CI104_02750 STAS domain-containing protein K07122 mlaB; phospholipid transport system transporter-binding protein D CI104_03110 sugar ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CI104_03330 carbohydrate ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CI104_13965 carbohydrate ABC transporter substrate-binding protein K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D CI104_13960 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D CI104_03105 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D CI104_03335 sugar ABC transporter permease K02025 ABC.MS.P; multiple sugar transport system permease protein D CI104_13955 sugar ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D CI104_03100 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D CI104_03340 carbohydrate ABC transporter permease K02026 ABC.MS.P1; multiple sugar transport system permease protein D CI104_18650 autoinducer 2 ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D CI104_23940 autoinducer 2 ABC transporter substrate-binding protein K02058 ABC.SS.S; simple sugar transport system substrate-binding protein D CI104_09935 carbohydrate transporter K02057 ABC.SS.P; simple sugar transport system permease protein D CI104_18660 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D CI104_18665 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D CI104_23925 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D CI104_23930 ABC transporter permease K02057 ABC.SS.P; simple sugar transport system permease protein D CI104_18655 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_23935 sugar ABC transporter ATP-binding protein K02056 ABC.SS.A; simple sugar transport system ATP-binding protein [EC:7.5.2.-] D CI104_25205 pstS; phosphate ABC transporter substrate-binding protein PstS K02040 pstS; phosphate transport system substrate-binding protein D CI104_25210 pstC; phosphate ABC transporter permease subunit PstC K02037 pstC; phosphate transport system permease protein D CI104_25215 pstA; phosphate ABC transporter, permease protein PstA K02038 pstA; phosphate transport system permease protein D CI104_25220 phosphate ABC transporter ATP-binding protein PstB K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D CI104_23070 phnD; phosphonate ABC transporter substrate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein D CI104_23075 phnE; phosphonate ABC transporter, permease protein PhnE K02042 phnE; phosphonate transport system permease protein D CI104_23065 phnC; phosphonate ABC transporter ATP-binding protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D CI104_17690 lysine/arginine/ornithine ABC transporter substrate-binding protein ArgT K10013 argT; lysine/arginine/ornithine transport system substrate-binding protein D CI104_17675 amino acid ABC transporter permease K10015 hisM; histidine transport system permease protein D CI104_17680 amino acid ABC transporter permease K10016 hisQ; histidine transport system permease protein D CI104_17670 histidine ABC transporter ATP-binding protein HisP K10017 hisP; histidine transport system ATP-binding protein [EC:7.4.2.1] D CI104_17685 histidine ABC transporter substrate-binding protein HisJ K10014 hisJ; histidine transport system substrate-binding protein D CI104_08460 amino acid ABC transporter substrate-binding protein K10036 glnH; glutamine transport system substrate-binding protein D CI104_08455 glutamine ABC transporter permease GlnP K10037 glnP; glutamine transport system permease protein D CI104_08450 glnQ; glutamine ABC transporter ATP-binding protein K10038 glnQ; glutamine transport system ATP-binding protein [EC:7.4.2.1] D CI104_08740 arginine ABC transporter substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D CI104_08755 arginine ABC transporter substrate-binding protein K09997 artI; arginine transport system substrate-binding protein D CI104_08745 artM; arginine transporter permease subunit ArtM K09998 artM; arginine transport system permease protein D CI104_08750 arginine transporter permease subunit ArtQ K09999 artQ; arginine transport system permease protein D CI104_08760 arginine ABC transporter ATP-binding protein ArtP K10000 artP; arginine transport system ATP-binding protein [EC:7.4.2.1] D CI104_07600 glutamate/aspartate ABC transporter substrate-binding protein K10001 gltI; glutamate/aspartate transport system substrate-binding protein D CI104_07590 amino acid ABC transporter permease K10002 gltK; glutamate/aspartate transport system permease protein D CI104_07595 amino acid ABC transporter permease K10003 gltJ; glutamate/aspartate transport system permease protein D CI104_07585 artP; arginine transporter ATP-binding subunit K10004 gltL; glutamate/aspartate transport system ATP-binding protein [EC:7.4.2.1] D CI104_02305 amino acid ABC transporter substrate-binding protein K09969 aapJ; general L-amino acid transport system substrate-binding protein D CI104_02300 amino acid ABC transporter permease K09970 aapQ; general L-amino acid transport system permease protein D CI104_02295 amino acid ABC transporter permease K09971 aapM; general L-amino acid transport system permease protein D CI104_02290 amino acid ABC transporter ATP-binding protein K09972 aapP; general L-amino acid transport system ATP-binding protein [EC:7.4.2.1] D CI104_15785 cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D CI104_15775 amino acid ABC transporter permease K10009 tcyB; L-cystine transport system permease protein D CI104_15770 L-cystine ABC transporter ATP-binding protein YecC K10010 tcyC; L-cystine transport system ATP-binding protein [EC:7.4.2.1] D CI104_01425 branched-chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CI104_01445 branched chain amino acid ABC transporter substrate-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein D CI104_01450 high-affinity branched-chain amino acid ABC transporter permease LivH K01997 livH; branched-chain amino acid transport system permease protein D CI104_01455 livM; branched-chain amino acid ABC transporter permease K01998 livM; branched-chain amino acid transport system permease protein D CI104_01460 livG; ABC transporter ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein D CI104_01465 livF; ABC transporter ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein D CI104_12190 methionine ABC transporter substrate-binding protein K02073 metQ; D-methionine transport system substrate-binding protein D CI104_05440 metQ; methionine ABC transporter substrate-binding protein MetQ K02073 metQ; D-methionine transport system substrate-binding protein D CI104_00325 lipoprotein NlpA K02073 metQ; D-methionine transport system substrate-binding protein D CI104_12185 ABC transporter permease K02072 metI; D-methionine transport system permease protein D CI104_05445 DL-methionine transporter permease subunit K02072 metI; D-methionine transport system permease protein D CI104_12180 methionine ABC transporter ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CI104_05450 metN; D-methionine ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein D CI104_12835 urtA; urea ABC transporter substrate-binding protein K11959 urtA; urea transport system substrate-binding protein D CI104_12840 urtB; urea ABC transporter permease subunit UrtB K11960 urtB; urea transport system permease protein D CI104_12845 urtC; urea ABC transporter permease subunit UrtC K11961 urtC; urea transport system permease protein D CI104_12850 urtD; ABC transporter ATP-binding protein K11962 urtD; urea transport system ATP-binding protein D CI104_12855 urtE; ABC transporter ATP-binding protein K11963 urtE; urea transport system ATP-binding protein D CI104_17905 basic amino acid ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CI104_15025 amino acid ABC transporter K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CI104_12280 cysteine ABC transporter substrate-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CI104_17900 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CI104_15010 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CI104_15015 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CI104_12265 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CI104_12270 amino acid ABC transporter permease K02029 ABC.PA.P; polar amino acid transport system permease protein D CI104_17895 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CI104_12275 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CI104_15020 amino acid ABC transporter ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1] D CI104_14280 oligopeptide ABC transporter substrate-binding protein OppA K15580 oppA; oligopeptide transport system substrate-binding protein D CI104_13855 peptide ABC transporter substrate-binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CI104_14275 oppB; oligopeptide ABC transporter permease OppB K15581 oppB; oligopeptide transport system permease protein D CI104_14270 oligopeptide ABC transporter permease OppC K15582 oppC; oligopeptide transport system permease protein D CI104_14265 oppD; oligopeptide ABC transporter ATP-binding protein OppD K15583 oppD; oligopeptide transport system ATP-binding protein D CI104_14260 oligopeptide ABC transporter ATP-binding protein OppF K10823 oppF; oligopeptide transport system ATP-binding protein D CI104_00985 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CI104_13355 ABC transporter substrate-binding protein K12368 dppA; dipeptide transport system substrate-binding protein D CI104_00995 dipeptide ABC transporter permease DppB K12369 dppB; dipeptide transport system permease protein D CI104_01000 dipeptide ABC transporter permease DppC K12370 dppC; dipeptide transport system permease protein D CI104_01005 dipeptide ABC transporter ATP-binding protein K12371 dppD; dipeptide transport system ATP-binding protein D CI104_01010 dppF; dipeptide ABC transporter ATP-binding protein K12372 dppF; dipeptide transport system ATP-binding protein D CI104_14000 peptide ABC transporter substrate-binding protein SapA K19226 sapA; cationic peptide transport system substrate-binding protein D CI104_14005 peptide ABC transporter permease SapB K19227 sapB; cationic peptide transport system permease protein D CI104_14010 peptide ABC transporter permease SapC K19228 sapC; cationic peptide transport system permease protein D CI104_14015 ABC transporter ATP-binding protein K19229 sapD; cationic peptide transport system ATP-binding protein D CI104_14020 ABC transporter ATP-binding protein K19230 sapF; cationic peptide transport system ATP-binding protein D CI104_01245 nikA; nickel ABC transporter, nickel/metallophore periplasmic binding protein K15584 nikA; nickel transport system substrate-binding protein D CI104_01240 nickel ABC transporter permease subunit NikB K15585 nikB; nickel transport system permease protein D CI104_01235 nickel ABC transporter permease subunit NikC K15586 nikC; nickel transport system permease protein D CI104_01230 nikD; nickel import ATP-binding protein NikD K15587 nikD; nickel transport system ATP-binding protein [EC:7.2.2.11] D CI104_08580 glutathione ABC transporter substrate-binding protein GsiB K13889 gsiB; glutathione transport system substrate-binding protein D CI104_08585 glutathione ABC transporter permease GsiC K13890 gsiC; glutathione transport system permease protein D CI104_08590 glutathione ABC transporter permease GsiD K13891 gsiD; glutathione transport system permease protein D CI104_08575 glutathione ABC transporter ATP-binding protein GsiA K13892 gsiA; glutathione transport system ATP-binding protein D CI104_20815 ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CI104_13080 peptide ABC transporter substrate-binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CI104_20810 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CI104_13085 ABC transporter permease K02033 ABC.PE.P; peptide/nickel transport system permease protein D CI104_20805 ABC transporter permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CI104_13090 D-ala-D-ala transporter subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CI104_20800 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CI104_13095 ABC transporter ATP-binding protein K02031 ddpD; peptide/nickel transport system ATP-binding protein D CI104_13100 peptide ABC transporter ATP-binding protein K02032 ddpF; peptide/nickel transport system ATP-binding protein D CI104_17020 ABC transporter substrate-binding protein K13893 yejA; microcin C transport system substrate-binding protein D CI104_17025 microcin C ABC transporter permease YejB K13894 yejB; microcin C transport system permease protein D CI104_17030 ABC transporter permease K13895 yejE; microcin C transport system permease protein D CI104_17035 microcin C ABC transporter ATP-binding protein YejF K13896 yejF; microcin C transport system ATP-binding protein D CI104_05210 iron-hydroxamate transporter substrate-binding subunit K23227 fhuD; ferric hydroxamate transport system substrate-binding protein D CI104_05215 Fe3+-hydroxamate ABC transporter permease FhuB K23228 fhuB; ferric hydroxamate transport system permease protein D CI104_05205 iron-hydroxamate transporter ATP-binding subunit K10829 fhuC; ferric hydroxamate transport system ATP-binding protein [EC:7.2.2.16] D CI104_07325 Fe2+-enterobactin ABC transporter substrate-binding protein K23185 fepB; ferric enterobactin transport system substrate-binding protein D CI104_07315 iron-enterobactin transporter K23186 fepD; iron-siderophore transport system permease protein D CI104_07310 iron-enterobactin transporter permease K23187 fepG; iron-siderophore transport system permease protein D CI104_07305 iron-enterobactin transporter ATP-binding protein K23188 fepC; iron-siderophore transport system ATP-binding protein [EC:7.2.2.17 7.2.2.-] D CI104_13890 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CI104_14475 ABC transporter substrate-binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D CI104_13895 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CI104_14480 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CI104_08150 iron ABC transporter permease K02015 ABC.FEV.P; iron complex transport system permease protein D CI104_14485 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CI104_08155 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CI104_13900 ABC transporter ATP-binding protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D CI104_05240 vitamin B12 ABC transporter substrate-binding protein BtuF K06858 btuF; vitamin B12 transport system substrate-binding protein D CI104_11970 vitamin B12 ABC transporter permease BtuC K06073 btuC; vitamin B12 transport system permease protein D CI104_11980 vitamin B12 ABC transporter ATP-binding protein BtuD K06074 btuD; vitamin B12 transport system ATP-binding protein [EC:7.6.2.8] D CI104_15345 zinc ABC transporter substrate-binding protein K09815 znuA; zinc transport system substrate-binding protein D CI104_15355 zinc ABC transporter permease K09816 znuB; zinc transport system permease protein D CI104_15350 zinc ABC transporter ATP-binding protein ZnuC K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CI104_19875 metal ABC transporter substrate-binding protein K11604 sitA; manganese/iron transport system substrate-binding protein D CI104_19885 metal ABC transporter permease K11605 sitC; manganese/iron transport system permease protein D CI104_19890 metal ABC transporter permease K11606 sitD; manganese/iron transport system permease protein D CI104_19880 manganese/iron transporter ATP-binding protein K11607 sitB; manganese/iron transport system ATP-binding protein D CI104_16105 cobalt ABC transporter substrate-binding protein CbiN K02009 cbiN; cobalt/nickel transport protein D CI104_16100 cobalt ECF transporter T component CbiQ K02008 cbiQ; cobalt/nickel transport system permease protein D CI104_16110 cobalt ECF transporter S component CbiM K02007 cbiM; cobalt/nickel transport system permease protein D CI104_16095 energy-coupling factor ABC transporter ATP-binding protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein D CI104_04325 ECF transporter S component K16923 qrtT; energy-coupling factor transport system substrate-specific component D CI104_04320 energy-coupling factor transporter transmembrane protein EcfT K16785 ecfT; energy-coupling factor transport system permease protein D CI104_04315 cobalt ABC transporter ATP-binding protein K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CI104_04310 ABC transporter ATP-binding protein K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-] D CI104_21975 LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CI104_09980 lptF; LPS export ABC transporter permease LptF K07091 lptF; lipopolysaccharide export system permease protein D CI104_21970 LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CI104_09975 lptG; LPS export ABC transporter permease LptG K11720 lptG; lipopolysaccharide export system permease protein D CI104_02700 lptB; ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CI104_08355 ABC transporter permease K25180 ybhR; drug efflux transport system permease protein D CI104_08360 hypothetical protein K25181 ybhS; drug efflux transport system permease protein D CI104_08365 ABC transporter ATP-binding protein K25182 ybhF; drug efflux transport system ATP-binding protein D CI104_08370 secretion protein HlyD K25183 ybhG; membrane fusion protein YbhG D CI104_10915 lipoprotein-releasing system transmembrane subunit LolC K09808 lolC_E; lipoprotein-releasing system permease protein D CI104_10925 lipoprotein-releasing system transmembrane subunit LolE K09808 lolC_E; lipoprotein-releasing system permease protein D CI104_10920 lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CI104_17130 ccmD; heme exporter protein CcmD K02196 ccmD; heme exporter protein D D CI104_17135 heme ABC transporter permease K02195 ccmC; heme exporter protein C D CI104_17140 ccmB; heme exporter protein CcmB K02194 ccmB; heme exporter protein B D CI104_17145 cytochrome c biogenesis heme-transporting ATPase CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D CI104_01410 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D CI104_01405 ftsE; cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D CI104_05130 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CI104_01210 ABC transporter permease K01992 ABC-2.P; ABC-2 type transport system permease protein D CI104_05125 ABC transporter ATP-binding protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D CI104_10110 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D CI104_10115 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D CI104_27245 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D CI104_06950 ABC transporter permease K02004 ABC.CD.P; putative ABC transport system permease protein D CI104_10120 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CI104_27240 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CI104_06945 ABC transporter ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D CI104_12140 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D CI104_18095 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CI104_12330 MATE family efflux transporter K26939 norM; MATE family, multidrug efflux pump D CI104_23375 MATE family efflux transporter K26937 dinF; MATE family, multidrug efflux pump D CI104_16060 MATE family multidrug exporter K26937 dinF; MATE family, multidrug efflux pump D CI104_04235 sugar porter family MFS transporter K08137 galP; MFS transporter, SP family, galactose:H+ symporter D CI104_18695 MFS transporter K08138 xylE; MFS transporter, SP family, xylose:H+ symportor D CI104_22240 MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease D CI104_03870 MFS transporter K02532 lacY; MFS transporter, OHS family, lactose permease D CI104_00185 fucP; L-fucose:H+ symporter permease K02429 fucP; MFS transporter, FHS family, L-fucose permease D CI104_00410 MFS transporter K02429 fucP; MFS transporter, FHS family, L-fucose permease D CI104_16970 MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D CI104_04810 MFS transporter K03291 MFS.SET; MFS transporter, SET family, sugar efflux transporter D CI104_04130 nucleoside permease K03289 nupG; MFS transporter, NHS family, nucleoside permease D CI104_18075 nucleoside permease K11537 xapB; MFS transporter, NHS family, xanthosine permease D CI104_07725 MFS transporter K03288 citA; MFS transporter, MHS family, citrate/tricarballylate:H+ symporter D CI104_18915 MFS transporter K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease D CI104_04500 MFS transporter K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CI104_23035 proline/glycine betaine transporter ProP K03762 proP; MFS transporter, MHS family, proline/betaine transporter D CI104_12770 MFS transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D CI104_16010 MFS transporter K08172 shiA; MFS transporter, MHS family, shikimate and dehydroshikimate transport protein D CI104_06890 MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D CI104_12760 MFS transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter D CI104_00945 oxalate/formate antiport family MFS transporter K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter D CI104_02605 MFS transporter K03290 nanT; MFS transporter, SHS family, sialic acid transporter D CI104_13295 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D CI104_20080 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D CI104_21510 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D CI104_21635 MFS transporter K03535 gudP; MFS transporter, ACS family, glucarate transporter D CI104_03250 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D CI104_21460 MFS transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter D CI104_00050 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D CI104_12980 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D CI104_10030 MFS transporter K08194 dgoT; MFS transporter, ACS family, D-galactonate transporter D CI104_03120 MFS transporter K12299 garP; MFS transporter, ACS family, probable galactarate transporter D CI104_17365 MFS transporter K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein D CI104_00680 aromatic acid/H+ symport family MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D CI104_16825 MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D CI104_00885 aromatic acid/H+ symport family MFS transporter K08195 pcaK; MFS transporter, AAHS family, 4-hydroxybenzoate transporter D CI104_12070 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter D CI104_12075 MFS transporter K26745 ydiM_N; MFS transporter, AAHS family, multidrug transporter D CI104_11570 cyanate MFS transporter K25494 nimT; MFS transporter, CP family, 2-nitroimidazole transporter D CI104_17930 cyanate transporter K03449 MFS.CP; MFS transporter, CP family, cyanate transporter D CI104_18685 3-phenylpropionate MFS transporter K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D CI104_00210 hexose-6-phosphate:phosphate antiporter K07784 uhpT; MFS transporter, OPA family, hexose phosphate transport protein UhpT D CI104_17335 glpT; MFS transporter K02445 glpT; MFS transporter, OPA family, glycerol-3-phosphate transporter D CI104_05955 MFS transporter family glucose-6-phosphate receptor UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CI104_00205 MFS transporter family glucose-6-phosphate receptor UhpC K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CI104_14365 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CI104_13220 NarK family nitrate/nitrite MFS transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D CI104_20395 lysophospholipid transporter LplT K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D CI104_07320 enterobactin transporter EntS K08225 entS; MFS transporter, ENTS family, enterobactin (siderophore) exporter D CI104_06395 AmpG family muropeptide MFS transporter K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D CI104_27430 tetracycline efflux MFS transporter Tet(D) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D CI104_25780 tetracycline efflux MFS transporter Tet(D) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D CI104_17050 Bcr/CflA family drug resistance efflux transporter K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D CI104_00140 MFS transporter K08154 emrD; MFS transporter, DHA1 family, 2-module integral membrane pump EmrD D CI104_12890 sugar transporter K08159 sotB; MFS transporter, DHA1 family, L-arabinose/isopropyl-beta-D-thiogalactopyranoside export protein D CI104_08635 multidrug transporter MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D CI104_06055 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D CI104_10315 MFS transporter K08161 mdtG; MFS transporter, DHA1 family, multidrug resistance protein D CI104_10380 MFS transporter K08162 mdtH; MFS transporter, DHA1 family, multidrug resistance protein D CI104_00240 nepI; MFS transporter K03445 nepI; MFS transporter, DHA1 family, purine ribonucleoside efflux pump D CI104_21530 MFS transporter K23241 mdtM; MFS transporter, DHA1 family, multidrug resistance protein D CI104_12370 MFS transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CI104_05495 MFS sugar transporter K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein D CI104_19630 emrB; multidrug efflux MFS transporter subunit EmrB K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein D CI104_13170 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CI104_15200 MFS transporter K08169 yebQ; MFS transporter, DHA2 family, multidrug resistance protein D CI104_16620 multidrug transporter subunit MdtD K18326 mdtD; MFS transporter, DHA2 family, multidrug resistance protein D CI104_06675 MFS transporter K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D CI104_12665 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CI104_19420 MFS transporter K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D CI104_08965 MFS transporter K08219 UMF2; MFS transporter, UMF2 family, putative MFS family transporter protein D CI104_01875 MFS transporter TsgA K06141 tsgA; MFS transporter, TsgA protein D CI104_04680 MFS transporter K08368 yaaU; MFS transporter, putative metabolite transport protein D CI104_11655 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CI104_11685 MFS transporter K08369 ydjE; MFS transporter, putative metabolite:H+ symporter D CI104_18135 phosphoenolpyruvate-protein phosphotransferase PtsI K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CI104_20360 phosphoenolpyruvate-protein phosphotransferase PtsP K08484 ptsP; phosphotransferase system, enzyme I, PtsP [EC:2.7.3.9] D CI104_18130 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CI104_02675 HPr family phosphocarrier protein K08485 ptsO; phosphocarrier protein NPr D CI104_24015 ptsP; phosphoenolpyruvate--protein phosphotransferase K23991 ptsA; multiphosphoryl transfer protein [EC:2.7.3.9 2.7.1.-] D CI104_16965 bifunctional PTS fructose transporter subunit IIA/HPr protein K11183 fruB; multiphosphoryl transfer protein [EC:2.7.1.202] D CI104_18140 glucose-specific phosphotransferase enzyme IIA component K02777 crr; sugar PTS system EIIA component [EC:2.7.1.-] D CI104_10575 PTS glucose transporter subunit IIBC K02779 ptsG; glucose PTS system EIICB or EIICBA component [EC:2.7.1.199] D CI104_07020 PTS N-acetylglucosamine transporter subunit IICB K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199] D CI104_07705 PTS N-acetyl glucosamine transporter subunit IIABC K02804 nagE; N-acetylglucosamine PTS system EIICBA or EIICB component [EC:2.7.1.193] D CI104_20025 PTS glucose transporter subunit IIB K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_12555 PTS sugar transporter subunit IIBC K02791 malX; maltose/glucose PTS system EIICB component [EC:2.7.1.199 2.7.1.208] D CI104_18775 PTS sugar transporter subunit IIC K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211] D CI104_19780 PTS cellobiose/arbutin/salicin transporter subunit IIBC K02753 ascF; beta-glucoside (arbutin/salicin/cellobiose) PTS system EIICB component [EC:2.7.1.-] D CI104_22125 PTS trehalose transporter subunit IIBC K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201] D CI104_00095 PTS alpha-glucoside transporter subunit IICB K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D CI104_00425 PTS glucose transporter subunit IIBC K02750 glvC; alpha-glucoside PTS system EIICB component [EC:2.7.1.208 2.7.1.-] D CI104_09875 DNA-binding protein K02768 fruB; fructose PTS system EIIA component [EC:2.7.1.202] D CI104_16955 PTS fructose transporter subunit EIIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CI104_09870 PTS fructose transporter subunit IIBC K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202] D CI104_23990 PTS fructose-like transporter subunit EIIB K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D CI104_24005 PTS fructose-like transporter subunit EIIB K11202 fryB; fructose-like PTS system EIIB component [EC:2.7.1.-] D CI104_24010 PTS fructose-like transporter subunit EIIC K11203 fryC; fructose-like PTS system EIIC or EIIBC or EIIABC component D CI104_04280 cmtB; PTS mannitol transporter subunit IIA K02798 cmtB; mannitol PTS system EIIA component [EC:2.7.1.197] D CI104_00720 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D CI104_04285 PTS mannitol transporter subunit IICBA K02800 mtlA; mannitol PTS system EIICBA or EIICB component [EC:2.7.1.197] D CI104_11845 PTS N N'-diacetylchitobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CI104_23755 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CI104_00250 PTS lactose/cellobiose transporter subunit IIA K02759 celC; cellobiose PTS system EIIA component [EC:2.7.1.196 2.7.1.205] D CI104_11835 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_05820 PTS cellobiose transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_23750 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_00265 PTS sugar transporter subunit IIB K02760 celA; cellobiose PTS system EIIB component [EC:2.7.1.196 2.7.1.205] D CI104_11840 PTS N,N'-diacetylchitobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CI104_21270 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CI104_18435 celB; PTS system, cellobiose-specific IIC component K02761 celB; cellobiose PTS system EIIC component D CI104_00260 PTS cellobiose transporter subunit IIC K02761 celB; cellobiose PTS system EIIC component D CI104_19725 PTS glucitol/sorbitol transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D CI104_17290 PTS glucose transporter subunit IIA K02781 srlB; glucitol/sorbitol PTS system EIIA component [EC:2.7.1.198] D CI104_17285 PTS sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D CI104_19720 srlE; PTS glucitol/sorbitol transporter subunit IIB K02782 srlE; glucitol/sorbitol PTS system EIIB component [EC:2.7.1.198] D CI104_19715 srlA; PTS glucitol/sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component D CI104_17295 PTS sorbitol transporter subunit IIC K02783 srlA; glucitol/sorbitol PTS system EIIC component D CI104_13515 PTS sugar transporter subunit IIA K02773 gatA; galactitol PTS system EIIA component [EC:2.7.1.200] D CI104_13500 PTS sugar transporter subunit IIB K02774 gatB; galactitol PTS system EIIB component [EC:2.7.1.200] D CI104_13505 permease K02775 gatC; galactitol PTS system EIIC component D CI104_15125 PTS mannose transporter subunit EIIAB K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191] D CI104_04595 PTS fructose transporter subunit IIA K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D CI104_15130 PTS mannose/fructose/sorbose transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CI104_04585 PTS sugar transporter subunit IIC K02795 manY; mannose PTS system EIIC component D CI104_15135 PTS mannose transporter subunit IID K02796 manZ; mannose PTS system EIID component D CI104_23545 PTS sorbose transporter subunit IIA K02812 sorF; sorbose PTS system EIIA component [EC:2.7.1.206] D CI104_23550 PTS fructose transporter subunit IIB K02813 sorB; sorbose PTS system EIIB component [EC:2.7.1.206] D CI104_23555 PTS mannose/fructose/sorbose transporter subunit IIC K02814 sorA; sorbose PTS system EIIC component D CI104_23560 PTS mannose transporter subunit IID K02815 sorM; sorbose PTS system EIID component D CI104_03045 PTS N-acetylgalactosamine transporter subunit IIA K02744 agaF; N-acetylgalactosamine PTS system EIIA component [EC:2.7.1.-] D CI104_03060 PTS N-acetylgalactosamine transporter subunit IIB K02745 agaV; N-acetylgalactosamine PTS system EIIB component [EC:2.7.1.-] D CI104_03055 PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC K02746 agaW; N-acetylgalactosamine PTS system EIIC component D CI104_03050 PTS N-acetylgalactosamine transporter subunit IID K02747 agaE; N-acetylgalactosamine PTS system EIID component D CI104_03025 PTS N-acetylgalactosamine transporter subunit IIB K10984 agaB; galactosamine PTS system EIIB component [EC:2.7.1.-] D CI104_03020 PTS N-acetylgalactosamine transporter subunit IIC K10985 agaC; galactosamine PTS system EIIC component D CI104_03015 PTS N-acetylgalactosamine transporter subunit IID K10986 agaD; galactosamine PTS system EIID component D CI104_00295 PTS fructose transporter subunit IIA K17464 dgaA; D-glucosaminate PTS system EIIA component [EC:2.7.1.203] D CI104_00300 PTS system mannose/fructose/N-acetylgalactosamine-transporter subunit IIB K17465 dgaB; D-glucosaminate PTS system EIIB component [EC:2.7.1.203] D CI104_00305 PTS sugar transporter subunit IIC K17466 dgaC; D-glucosaminate PTS system EIIC component D CI104_00310 PTS fructose transporter subunit IID K17467 dgaD; D-glucosaminate PTS system EIID component D CI104_04580 PTS fructose transporter subunit IID K17467 dgaD; D-glucosaminate PTS system EIID component D CI104_08970 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_17625 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_06205 PTS sugar transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_22450 PTS ascorbate transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_24340 PTS fructose transporter subunit IIA K02821 ulaC; ascorbate PTS system EIIA or EIIAB component [EC:2.7.1.194] D CI104_08990 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_17620 PTS mannitol transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_06200 PTS mannose transporter subunit IIA K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_22455 PTS ascorbate transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_24360 PTS lactose transporter subunit IIB K02822 ulaB; ascorbate PTS system EIIB component [EC:2.7.1.194] D CI104_08985 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_17615 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_06195 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_22460 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_24355 PTS ascorbate transporter subunit IIC K03475 ulaA; ascorbate PTS system EIIC component D CI104_02685 PTS IIA-like nitrogen regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CI104_14585 dihydroxyacetone kinase subunit DhaM K05881 dhaM; phosphoenolpyruvate---glycerone phosphotransferase subunit DhaM [EC:2.7.1.121] D CI104_08820 aquaporin K06188 aqpZ; aquaporin Z D CI104_24135 aquaporin K02440 glpF; glycerol uptake facilitator D CI104_16180 aquaporin K27261 pduF; propanediol uptake facilitator D CI104_14255 ion transporter K10716 kch; voltage-gated potassium channel D CI104_06495 ammonium transporter K03320 amt; ammonium transporter, Amt family D CI104_17645 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CI104_23270 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CI104_12480 glutathione S-transferase K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CI104_08615 glutathione S-transferase family protein K00799 GST; glutathione S-transferase [EC:2.5.1.18] D CI104_02585 stringent starvation protein A K03599 sspA; stringent starvation protein A D CI104_24405 VWA domain-containing protein K07114 yfbK; Ca-activated chloride channel homolog D CI104_09315 BAX inhibitor protein K19416 yccA; modulator of FtsH protease D CI104_09010 formate transporter FocA K06212 focA; formate transporter D CI104_01860 nitrite transporter NirC K02598 nirC; nitrite transporter D CI104_02195 large conductance mechanosensitive channel protein MscL K03282 mscL; large conductance mechanosensitive channel D CI104_06595 mechanosensitive channel MscK K05802 mscK; potassium-dependent mechanosensitive channel D CI104_22600 miniconductance mechanosensitive channel MscM K22051 mscM; miniconductance mechanosensitive channel D CI104_04380 mechanosensitive ion channel protein MscS K03442 mscS; small conductance mechanosensitive channel D CI104_08445 mechanosensitive channel protein K22044 ybiO; moderate conductance mechanosensitive channel D CI104_13840 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein D CI104_07140 mechanosensitive ion channel family protein K16053 ybdG; miniconductance mechanosensitive channel D CI104_17200 mgtE; magnesium transporter K06213 mgtE; magnesium transporter D CI104_15550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CI104_05745 putative lateral flagellar export/assembly protein LafU K02557 motB; chemotaxis protein MotB D CI104_15545 motB; motility protein MotB K02557 motB; chemotaxis protein MotB D CI104_03970 exbB; biopolymer transporter ExbB K03561 exbB; biopolymer transport protein ExbB D CI104_03975 TonB system transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D CI104_08060 tolQ; protein TolQ K03562 tolQ; biopolymer transport protein TolQ D CI104_08065 tolR; protein TolR K03560 tolR; biopolymer transport protein TolR D CI104_24780 corA; magnesium transporter CorA K03284 corA; magnesium transporter D CI104_13760 zntB; zinc transporter ZntB K16074 zntB; zinc transporter D CI104_07480 fluoride ion transporter CrcB K06199 crcB; fluoride exporter D CI104_12935 hypothetical protein K08994 yneE; ion channel-forming bestrophin family protein D CI104_26590 mercuric transport protein K08363 merT; mercuric ion transport protein D CI104_26595 merP; mercuric transporter periplasmic component K08364 merP; periplasmic mercuric ion binding protein D CI104_28665 mercury transport protein MerC K19058 merC; mercuric ion transport protein D CI104_26600 mercury transport protein MerC K19058 merC; mercuric ion transport protein D CI104_28650 mercury resistance protein K19059 merE; mercuric ion transport protein D CI104_26615 mercury resistance protein K19059 merE; mercuric ion transport protein D CI104_22335 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D CI104_19045 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CI104_05775 phosphoporin PhoE K11929 phoE; outer membrane pore protein E D CI104_17225 porin OmpC K09475 ompC; outer membrane pore protein C D CI104_13160 phosphoporin PhoE K16076 nmpC; outer membrane porin protein LC D CI104_13730 porin K14062 ompN; outer membrane protein N D CI104_15970 porin OmpC K14062 ompN; outer membrane protein N D CI104_23415 lamB; maltoporin K02024 lamB; maltoporin D CI104_00245 carbohydrate porin K02024 lamB; maltoporin D CI104_09890 porin K16077 scrY; sucrose porin D CI104_09250 porin OmpA K03286 TC.OOP; OmpA-OmpF porin, OOP family D CI104_08475 ompX; outer membrane protein OmpX K11934 ompX; outer membrane protein X D CI104_17845 long-chain fatty acid transporter FadL K06076 fadL; long-chain fatty acid transport protein D CI104_06255 nucleoside-specific channel-forming protein Tsx K05517 tsx; nucleoside-specific channel-forming protein D CI104_13685 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_20515 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CI104_20640 fimbrial protein K07347 fimD; outer membrane usher protein D CI104_20700 fimbrial protein K07347 fimD; outer membrane usher protein D CI104_15465 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_15510 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_11400 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_24460 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_13250 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_05870 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_05875 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_05935 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_11135 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_08535 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_12730 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_12940 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_09645 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_15680 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_14135 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_07090 autotransporter outer membrane beta-barrel domain-containing protein K19231 bmaC; fibronectin-binding autotransporter adhesin D CI104_07275 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D CI104_14220 TonB-dependent siderophore receptor K19611 fepA; ferric enterobactin receptor D CI104_23885 btuB; TonB-dependent vitamin B12 receptor BtuB K16092 btuB; vitamin B12 transporter D CI104_10580 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D CI104_03650 TonB-dependent receptor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D CI104_16905 ligand-gated channel protein K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins D CI104_13320 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CI104_14595 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CI104_05200 ferrichrome porin FhuA K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CI104_07110 TonB-dependent siderophore receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D CI104_07060 copper transporter K07796 cusC; outer membrane protein, copper/silver efflux system D CI104_03830 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CI104_19230 type I secretion protein TolC K12543 lapE; outer membrane protein, adhesin transport system D CI104_13630 transporter K18139 oprM; outer membrane protein, multidrug efflux system D CI104_16560 polysaccharide export protein Wza K01991 wza; polysaccharide biosynthesis/export protein D CI104_13920 hypothetical protein K14053 ompG; outer membrane protein G D CI104_27295 glucuronide uptake porin UidC K16140 uidC; putative glucuronide porin D CI104_05335 bamA; outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family D CI104_18530 outer membrane protein assembly factor BamB K17713 bamB; outer membrane protein assembly factor BamB D CI104_18395 outer membrane protein assembly factor BamC K07287 bamC; outer membrane protein assembly factor BamC D CI104_18960 outer membrane protein assembly factor BamD K05807 bamD; outer membrane protein assembly factor BamD D CI104_19070 outer membrane protein assembly factor BamE K06186 bamE; outer membrane protein assembly factor BamE D CI104_22295 outer membrane protein assembly factor K07278 tamA; translocation and assembly module TamA D CI104_22290 translocation and assembly module TamB K09800 tamB; translocation and assembly module TamB D CI104_24080 hypothetical protein K22110 kdgM; oligogalacturonate-specific porin family protein D CI104_02870 porin K22110 kdgM; oligogalacturonate-specific porin family protein D CI104_24515 ompL; porin OmpL K22110 kdgM; oligogalacturonate-specific porin family protein D CI104_16685 hypothetical protein K19233 btaF; ECM component-binding autotransporter adhesin D CI104_02705 lipopolysaccharide ABC transporter substrate-binding protein LptA K09774 lptA; lipopolysaccharide export system protein LptA D CI104_02710 lptC; LPS export ABC transporter periplasmic protein LptC K11719 lptC; lipopolysaccharide export system protein LptC D CI104_04735 LPS assembly protein LptD K04744 lptD; LPS-assembly protein D CI104_07565 LPS assembly lipoprotein LptE K03643 lptE; LPS-assembly lipoprotein D CI104_01065 cellulose biosynthesis protein BcsC K20543 bcsC; cellulose synthase operon protein C D CI104_07610 magnesium/cobalt transporter CorC K06189 corC; hemolysin (HlyC) family protein D CI104_23235 CidA/LrgA family protein K06518 cidA; holin-like protein D CI104_16835 hypothetical protein K06518 cidA; holin-like protein D CI104_16185 ethanolamine utilization protein EutM K27260 pduA; bacterial microcompartment shell protein D CI104_18280 ethanolamine utilization microcompartment protein EutM K04027 eutM; ethanolamine utilization protein EutM D CI104_22980 melibiose/sodium symporter K11104 melB; melibiose permease D CI104_27290 MFS transporter K16139 uidB; glucuronide carrier protein D CI104_15435 MFS transporter K16210 togT; oligogalacturonide transporter D CI104_22330 MFS transporter K16210 togT; oligogalacturonide transporter D CI104_07115 phenylalanine transporter K11732 pheP; phenylalanine-specific permease D CI104_16910 lysine transporter K11733 lysP; lysine-specific permease D CI104_05000 aromatic amino acid transporter AroP K11734 aroP; aromatic amino acid transport protein AroP D CI104_19505 GABA permease K11735 gabP; GABA permease D CI104_06145 proline-specific permease ProY K11736 proY; proline-specific permease ProY D CI104_22390 D-serine/D-alanine/glycine transporter K11737 cycA; D-serine/D-alanine/glycine transporter D CI104_13310 L-asparagine permease K11738 ansP; L-asparagine permease D CI104_07775 putrescine-ornithine antiporter K03756 potE; putrescine:ornithine antiporter D CI104_22065 arcD; arginine-ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CI104_12610 arginine:ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CI104_23010 arginine/agmatine antiporter K03759 adiC; arginine:agmatine antiporter D CI104_01845 frlA; fructoselysine transporter K19540 frlA; fructoselysine transporter D CI104_22695 L-methionine/branched-chain amino acid transporter K16263 yjeH; amino acid efflux transporter D CI104_08135 cation transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein D CI104_24215 cation-efflux pump FieF K13283 fieF; ferrous-iron efflux pump FieF D CI104_03805 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family D CI104_07075 CusA/CzcA family heavy metal efflux RND transporter K07787 cusA; copper/silver efflux system protein D CI104_06575 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CI104_08505 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CI104_18355 multidrug efflux RND transporter permease subunit K18324 acrD; multidrug efflux pump D CI104_02320 multidrug efflux RND transporter permease subunit K18142 acrF; multidrug efflux pump D CI104_14535 multidrug efflux RND transporter permease subunit OqxB K19585 oqxB; multidrug efflux pump D CI104_16610 multidrug transporter subunit MdtB K07788 mdtB; multidrug efflux pump D CI104_16615 multidrug transporter subunit MdtC K07789 mdtC; multidrug efflux pump D CI104_19155 quaternary ammonium compound efflux SMR transporter QacE delta 1 K18975 ebr; small multidrug resistance pump D CI104_25630 quaternary ammonium compound efflux SMR transporter QacE delta 1 K18975 ebr; small multidrug resistance pump D CI104_25680 QacE family quaternary ammonium compound efflux SMR transporter K18975 ebr; small multidrug resistance pump D CI104_25710 QacE family quaternary ammonium compound efflux SMR transporter K18975 ebr; small multidrug resistance pump D CI104_26845 quaternary ammonium compound efflux SMR transporter QacE delta 1 K18975 ebr; small multidrug resistance pump D CI104_22640 quaternary ammonium compound-resistance protein SugE K11741 sugE; quaternary ammonium compound-resistance protein SugE D CI104_12645 multidrug/spermidine transporter subunit MdtI K11742 mdtI; spermidine export protein MdtI D CI104_12640 multidrug/spermidine transporter subunit MdtJ K11743 mdtJ; spermidine export protein MdtJ D CI104_12865 O-acetylserine/cysteine exporter K15268 eamA; O-acetylserine/cysteine efflux transporter D CI104_08470 threonine/homoserine exporter RhtA K11939 rhtA; inner membrane transporter RhtA D CI104_04075 multidrug DMT transporter permease K05340 glcU; glucose uptake protein D CI104_24255 L-rhamnose/proton symporter RhaT K02856 rhaT; L-rhamnose-H+ transport protein D CI104_24775 rarD; protein RarD K05786 rarD; chloramphenicol-sensitive protein RarD D CI104_13345 hypothetical protein K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein D CI104_17425 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase K12962 arnE; undecaprenyl phosphate-alpha-L-ara4N flippase subunit ArnE D CI104_12750 hypothetical protein K09771 TC.SMR3; small multidrug resistance family-3 protein D CI104_21955 gluconate permease K06157 idnT; Gnt-II system L-idonate transporter D CI104_01665 gluconate transporter K06155 gntT; Gnt-I system high-affinity gluconate transporter D CI104_00125 D-serine transporter DsdX K13629 dsdX; D-serine transporter D CI104_01530 gluconate transporter K06156 gntU; Gnt-I system low-affinity gluconate transporter D CI104_09800 gluconate permease K03299 TC.GNTP; gluconate:H+ symporter, GntP family D CI104_23040 kdgT; 2-keto-3-deoxygluconate transporter K02526 kdgT; 2-keto-3-deoxygluconate permease D CI104_05045 2-keto-3-deoxygluconate permease K02526 kdgT; 2-keto-3-deoxygluconate permease D CI104_24245 kdgT; 2-keto-3-deoxygluconate transporter K02526 kdgT; 2-keto-3-deoxygluconate permease D CI104_20690 C4-dicarboxylate ABC transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D CI104_22710 C4-dicarboxylate transporter K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA D CI104_22960 anaerobic C4-dicarboxylate transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CI104_00390 C4-dicarboxylate ABC transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D CI104_00695 L-lactate permease K00427 lldP; L-lactate permease D CI104_07205 high-affinity choline transporter BetT K02168 betT; choline/glycine/proline betaine transport protein D CI104_04655 L-carnitine/gamma-butyrobetaine antiporter K05245 caiT; L-carnitine/gamma-butyrobetaine antiporter D CI104_13480 dicarboxylate transporter/tellurite-resistance protein TehA K03304 tehA; tellurite resistance protein D CI104_14410 sodium-potassium/proton antiporter ChaA K07300 chaA; Ca2+:H+ antiporter D CI104_02725 calcium/sodium antiporter K07301 yrbG; cation:H+ antiporter D CI104_01190 inorganic phosphate transporter K16322 pit; low-affinity inorganic phosphate transporter D CI104_02370 sodium/panthothenate symporter K14392 panF; sodium/pantothenate symporter D CI104_10185 putP; sodium:proline symporter K11928 putP; sodium/proline symporter D CI104_23225 actP; cation acetate symporter K14393 actP; cation/acetate symporter D CI104_23150 glutamate/aspartate:proton symporter GltP K11102 gltP; proton glutamate symport protein D CI104_02860 C4-dicarboxylate transporter DctA K11103 dctA; aerobic C4-dicarboxylate transport protein D CI104_01080 dicarboxylate/amino acid:cation symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D CI104_03270 serine/threonine transporter SstT K07862 sstT; serine/threonine transporter D CI104_00440 gltS; sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family D CI104_04520 nhaA; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family D CI104_14645 nhaB; sodium/proton antiporter NhaB K03314 nhaB; Na+:H+ antiporter, NhaB family D CI104_23245 Na+/H+ antiporter K24163 nhaK; monovalent cation/hydrogen antiporter D CI104_14620 potassium/proton antiporter K11105 cvrA; potassium/hydrogen antiporter D CI104_04695 glutathione-regulated potassium-efflux system protein KefC K11745 kefC; glutathione-regulated potassium-efflux system protein KefC D CI104_04690 glutathione-regulated potassium-efflux system oxidoreductase KefF K11746 kefF; glutathione-regulated potassium-efflux system ancillary protein KefF D CI104_01955 glutathione-regulated potassium-efflux system protein KefB K11747 kefB; glutathione-regulated potassium-efflux system protein KefB D CI104_01950 glutathione-regulated potassium-efflux system ancillary protein KefG K11748 kefG; glutathione-regulated potassium-efflux system ancillary protein KefG D CI104_06670 Kef family K(+) transporter K26735 KEA4_5_6; K+:H+ antiporter D CI104_24635 Trk system potassium transporter TrkH K03498 trkH; trk/ktr system potassium uptake protein D CI104_02200 Trk system potassium transporter TrkA K03499 trkA; trk/ktr system potassium uptake protein D CI104_18455 uracil/xanthine transporter K02824 uraA; uracil permease D CI104_20980 purine permease K24206 uacT; uric acid transporter D CI104_00435 xanthine permease XanP K16345 xanP; xanthine permease XanP D CI104_20965 xanthine permease XanP K16346 xanQ; xanthine permease XanQ D CI104_23255 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CI104_20975 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CI104_25235 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CI104_00220 NCS2 family permease K06901 pbuG; adenine/guanine/hypoxanthine permease D CI104_18010 nucleoside permease NupC K11535 nupC; nucleoside transport protein D CI104_16940 NupC/NupG family nucleoside CNT transporter K16324 psuT; putative pseudouridine transporter D CI104_15645 tyrosine transporter TyrP K03834 tyrP; tyrosine-specific transport protein D CI104_02930 tryptophan permease K03835 mtr; tryptophan-specific transport protein D CI104_25250 tryptophan permease K03836 tnaB; low affinity tryptophan permease D CI104_20120 HAAAP family serine/threonine permease K03837 sdaC; serine transporter D CI104_03155 HAAAP family serine/threonine permease K03838 tdcC; threonine transporter D CI104_01015 transporter K26603 yhjV; inner membrane transport protein D CI104_03175 hypothetical protein K26604 cyuP; cysteine uptake transport protein D CI104_13455 benzoate transporter K05782 benE; benzoate membrane transport protein D CI104_07420 anion permease K09477 citT; citrate:succinate antiporter D CI104_03720 anion permease K11106 ttdT; L-tartrate/succinate antiporter D CI104_05225 chloride channel protein K03281 clcA; chloride channel protein, CIC family D CI104_17985 ion channel protein K03281 clcA; chloride channel protein, CIC family D CI104_26825 chromate transporter K07240 chrA; chromate transporter D CI104_26210 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D CI104_14465 C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family D CI104_27195 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D CI104_17195 SulP family inorganic anion transporter K03321 TC.SULP; sulfate permease, SulP family D CI104_18005 divalent metal cation transporter K03322 mntH; manganese transport protein D CI104_20760 C4-dicarboxylate ABC transporter permease K11690 dctM; C4-dicarboxylate transporter, DctM subunit D CI104_20755 C4-dicarboxylate ABC transporter substrate-binding protein K21395 yiaO; TRAP-type transport system periplasmic protein D CI104_21345 C4-dicarboxylate ABC transporter K21395 yiaO; TRAP-type transport system periplasmic protein D CI104_23595 hypothetical protein K03324 yjbB; phosphate:Na+ symporter D CI104_20860 arsA; arsenical pump-driving ATPase K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D CI104_26195 arsenical efflux pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein D CI104_20855 arsenical efflux pump membrane protein ArsB K03893 arsB; arsenical pump membrane protein D CI104_07465 anaerobic C4-dicarboxylate transporter DcuC K03326 TC.DCUC; C4-dicarboxylate transporter, DcuC family D CI104_24885 lipid III flippase WzxE K16693 wzxE; enterobacterial common antigen flippase D CI104_16480 lipopolysaccharide biosynthesis protein K16695 wzxC; lipopolysaccharide exporter D CI104_10400 mviN; lipid II flippase MurJ K03980 murJ; putative peptidoglycan lipid II flippase D CI104_25110 trkD; low affinity potassium transporter Kup K03549 kup; KUP system potassium uptake protein D CI104_04385 arginine exporter ArgO K06895 lysE; L-lysine exporter family protein LysE/ArgO D CI104_24750 rhtB; homoserine/homoserine lactone efflux protein K05834 rhtB; homoserine/homoserine lactone efflux protein D CI104_24755 threonine export protein RhtC K05835 rhtC; threonine efflux protein D CI104_21525 LysE family translocator K05835 rhtC; threonine efflux protein D CI104_05865 hypothetical protein K03329 yahN; amino acid exporter D CI104_15045 leucine efflux protein K11250 leuE; leucine efflux protein D CI104_24325 branched-chain amino acid ABC transporter permease K26605 azlC; branched chain amino acid efflux pump D CI104_19610 branched-chain amino acid transporter AzlC K26605 azlC; branched chain amino acid efflux pump D CI104_24330 AzlD domain-containing protein K26606 azlD; branched chain amino acid efflux pump D CI104_19615 L-valine transporter subunit YgaH K26606 azlD; branched chain amino acid efflux pump D CI104_02515 p-hydroxybenzoic acid efflux pump subunit AaeB K03468 aaeB; p-hydroxybenzoic acid efflux pump subunit AaeB D CI104_18415 AI-2E family transporter K03548 perM; putative permease D CI104_01365 VUT family protein K09125 yhhQ; queuosine precursor transporter D CI104_12885 stress protection protein MarC K05595 marC; multiple antibiotic resistance protein D CI104_04895 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CI104_15150 hypothetical protein K23242 mntP; manganese efflux pump family protein D CI104_10095 iron permease K07243 FTR; high-affinity iron transporter D CI104_10190 FTR1 family protein K07243 FTR; high-affinity iron transporter D CI104_10195 iron uptake system protein EfeO K07224 efeO; iron uptake system component EfeO D CI104_10200 deferrochelatase/peroxidase EfeB K16301 efeB; deferrochelatase/peroxidase EfeB [EC:1.11.1.-] D CI104_10100 iron transporter K07230 p19; periplasmic iron binding protein D CI104_20500 nickel/cobalt efflux protein RcnA K08970 rcnA; nickel/cobalt transporter (NicO) family protein D CI104_26295 nickel/cobalt efflux protein RcnA K08970 rcnA; nickel/cobalt transporter (NicO) family protein D CI104_18640 nickel transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D CI104_22945 nickel transporter K08970 rcnA; nickel/cobalt transporter (NicO) family protein D CI104_21375 carbon starvation protein A K23676 btsT; pyruvate/proton symporter D CI104_22975 hypothetical protein K15383 K15383; MtN3 and saliva related transmembrane protein D CI104_14230 TonB system transport protein TonB K03832 tonB; periplasmic protein TonB D CI104_08080 pal; peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CI104_08070 tolA; cell envelope integrity protein TolA K03646 tolA; colicin import membrane protein D CI104_08075 tolB; Tol-Pal system protein TolB K03641 tolB; TolB protein D CI104_10075 protein-disulfide reductase K08344 scsB; suppressor for copper-sensitivity B D CI104_13225 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CI104_14360 nitrate reductase subunit alpha K00370 narG; nitrate reductase / nitrite oxidoreductase, alpha subunit [EC:1.7.5.1 1.7.99.-] D CI104_13230 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CI104_14355 narH; nitrate reductase subunit beta K00371 narH; nitrate reductase / nitrite oxidoreductase, beta subunit [EC:1.7.5.1 1.7.99.-] D CI104_13240 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CI104_14345 narI; respiratory nitrate reductase subunit gamma K00374 narI; nitrate reductase gamma subunit [EC:1.7.5.1 1.7.99.-] D CI104_13145 fdnG; formate dehydrogenase-N subunit alpha K08348 fdnG; formate dehydrogenase-N, alpha subunit [EC:1.17.5.3] D CI104_13140 fdxH; formate dehydrogenase subunit beta K08349 fdnH; formate dehydrogenase-N, beta subunit D CI104_13135 formate dehydrogenase subunit gamma K08350 fdnI; formate dehydrogenase-N, gamma subunit D CI104_12710 dimethylsulfoxide reductase K07312 ynfH; Tat-targeted selenate reductase subunit YnfH D CI104_12720 dimethyl sulfoxide reductase subunit A K07310 ynfF; Tat-targeted selenate reductase subunit YnfF [EC:1.97.1.9] D CI104_08940 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D CI104_22940 dimethyl sulfoxide reductase subunit A K07306 dmsA; anaerobic dimethyl sulfoxide reductase subunit A [EC:1.8.5.3] D CI104_08945 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D CI104_22935 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D CI104_12715 dmsB; dimethylsulfoxide reductase, chain B K07307 dmsB; anaerobic dimethyl sulfoxide reductase subunit B D CI104_08950 dimethyl sulfoxide reductase anchor subunit K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C D CI104_22930 dimethyl sulfoxide reductase K07308 dmsC; anaerobic dimethyl sulfoxide reductase subunit C D CI104_22035 cytochrome C K07821 torY; trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorY D CI104_22030 trimethylamine-N-oxide reductase TorA K07812 torZ; trimethylamine-N-oxide reductase (cytochrome c) [EC:1.7.2.3] D CI104_00925 molybdopterin guanine dinucleotide-containing S/N-oxide reductase K08351 bisC; biotin/methionine sulfoxide reductase [EC:1.-.-.-] D CI104_12255 thiosulfate reductase cytochrome B subunit K08354 phsC; thiosulfate reductase cytochrome b subunit D CI104_12205 tetrathionate reductase subunit TtrA K08357 ttrA; tetrathionate reductase subunit A D CI104_12215 tetrathionate reductase subunit TtrB K08358 ttrB; tetrathionate reductase subunit B D CI104_12210 tetrathionate reductase subunit TtrC K08359 ttrC; tetrathionate reductase subunit C D CI104_19625 multidrug export protein EmrA K03543 emrA; membrane fusion protein, multidrug efflux system D CI104_07070 efflux RND transporter periplasmic adaptor subunit K07798 cusB; membrane fusion protein, copper/silver efflux system D CI104_19240 secretion protein HlyD K12542 lapC; membrane fusion protein, adhesin transport system D CI104_27460 HlyD family secretion protein K13408 cvaA; membrane fusion protein D CI104_06580 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CI104_02325 MexX family efflux pump subunit K18141 acrE; membrane fusion protein, multidrug efflux system D CI104_08200 multidrug efflux pump-associated protein, AcrZ family K25859 acrZ; accessory protein, multidrug efflux pump D CI104_14540 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K19586 oqxA; membrane fusion protein, multidrug efflux system D CI104_16605 multidrug transporter subunit MdtA K07799 mdtA; membrane fusion protein, multidrug efflux system D CI104_22855 efflux RND transporter periplasmic adaptor subunit K13888 macA; membrane fusion protein, macrolide-specific efflux system D CI104_08835 macrolide transporter subunit MacA K13888 macA; membrane fusion protein, macrolide-specific efflux system D CI104_02510 p-hydroxybenzoic acid efflux pump subunit AaeA K15548 aaeA; p-hydroxybenzoic acid efflux pump subunit AaeA D CI104_16550 tyrosine-protein kinase K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3] D CI104_24960 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D CI104_08130 nicotinamide riboside transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter D CI104_01700 feoA; ferrous iron transporter A K04758 feoA; ferrous iron transport protein A D CI104_01695 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B D CI104_01690 ferrous iron transporter C K07490 feoC; ferrous iron transport protein C D CI104_06025 peptide transporter K17938 sbmA; peptide/bleomycin uptake transporter D CI104_01185 universal stress protein B K06144 uspB; universal stress protein B D CI104_22655 entericidin, EcnA/B family K16347 ecnA; entericidin A D CI104_22650 entericidin EcnA/B family protein K16348 ecnB; entericidin B D CI104_17120 c-type cytochrome biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D CI104_06875 transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein D CI104_15260 hypothetical protein K07245 pcoD; copper resistance protein D D CI104_15265 hypothetical protein K07156 copC; copper resistance protein C D CI104_11610 MipA/OmpV family protein K07274 mipA; MipA family protein D CI104_00780 MipA/OmpV family protein K07274 mipA; MipA family protein D CI104_15700 hypothetical protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:cfar02044] D CI104_03830 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CI104_19235 type I secretion system permease/ATPase K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D CI104_19240 secretion protein HlyD K12542 lapC; membrane fusion protein, adhesin transport system D CI104_19230 type I secretion protein TolC K12543 lapE; outer membrane protein, adhesin transport system D CI104_27460 HlyD family secretion protein K13408 cvaA; membrane fusion protein D CI104_27455 peptidase C39 K13409 cvaB; ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB D CI104_04200 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CI104_20345 prepilin-type cleavage/methylation domain-containing protein K02679 ppdA; prepilin peptidase dependent protein A D CI104_20340 prepilin-type cleavage/methylation domain-containing protein K02680 ppdB; prepilin peptidase dependent protein B D CI104_20330 prepilin peptidase-dependent protein C K02681 ppdC; prepilin peptidase dependent protein C D CI104_04980 prepilin peptidase-dependent pilin K02682 ppdD; prepilin peptidase dependent protein D D CI104_04975 type II secretion system protein GspE K02504 hofB; protein transport protein HofB D CI104_04970 type IV pilin biogenesis protein K02505 hofC; protein transport protein HofC D CI104_01765 DNA utilization protein HofM K12288 hofM; pilus assembly protein HofM D CI104_01770 hypothetical protein K12289 hofN; pilus assembly protein HofN D CI104_01775 hypothetical protein K12290 hofO; pilus assembly protein HofO D CI104_01780 DUF2531 domain-containing protein K12291 hofP; pilus assembly protein HofP D CI104_01785 DNA transporter HofQ K02507 hofQ; protein transport protein HofQ D CI104_04190 hypothetical protein K02221 yggT; YggT family protein D CI104_06445 hypothetical protein K02237 comEA; competence protein ComEA D CI104_09055 ComEC family protein K02238 comEC; competence protein ComEC D CI104_05740 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CI104_15445 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CI104_15450 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CI104_15845 flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CI104_15855 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D CI104_15860 fliI; flagellum-specific ATP synthase FliL K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CI104_15885 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CI104_15890 fliO; flagellar type III secretion system protein FliO K02418 fliO; flagellar protein FliO/FliZ D CI104_15895 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CI104_15900 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CI104_15905 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CI104_26060 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG D CI104_27675 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG D CI104_28430 conjugal transfer protein TraG K12056 traG; conjugal transfer mating pair stabilization protein TraG D CI104_26050 conjugal transfer protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF D CI104_27700 traF; type-F conjugative transfer system pilin assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF D CI104_28405 traF; type-F conjugative transfer system pilin assembly protein TraF K12057 traF; conjugal transfer pilus assembly protein TraF D CI104_27710 traN; type-F conjugative transfer system mating-pair stabilization protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN D CI104_25430 conjugal transfer protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN D CI104_28385 traN; type-F conjugative transfer system mating-pair stabilization protein TraN K12058 traN; conjugal transfer mating pair stabilization protein TraN D CI104_27715 trbC; type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC D CI104_28380 trbC; type-F conjugative transfer system pilin assembly protein TrbC K12059 trbC; conjugal transfer pilus assembly protein TrbC D CI104_27720 conjugal transfer protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU D CI104_25425 plasmid transfer protein K12060 traU; conjugal transfer pilus assembly protein TraU D CI104_28375 conjugal transfer protein TraU K12060 traU; conjugal transfer pilus assembly protein TraU D CI104_27725 traW; type-F conjugative transfer system protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW D CI104_25420 conjugal transfer protein K12061 traW; conjugal transfer pilus assembly protein TraW D CI104_28365 traW; type-F conjugative transfer system protein TraW K12061 traW; conjugal transfer pilus assembly protein TraW D CI104_27730 trbI; type-F conjugative transfer system protein TrbI K12062 trbI; conjugal transfer pilin signal peptidase TrbI D CI104_25415 lepB; signal peptidase I K12062 trbI; conjugal transfer pilin signal peptidase TrbI D CI104_28360 trbI; type-F conjugative transfer system protein TrbI K12062 trbI; conjugal transfer pilin signal peptidase TrbI D CI104_27735 traC; type-IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC D CI104_25345 conjugal transfer protein K12063 traC; conjugal transfer ATP-binding protein TraC D CI104_28355 traC; type-IV secretion system protein TraC K12063 traC; conjugal transfer ATP-binding protein TraC D CI104_27760 traV; type IV conjugative transfer system protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV D CI104_28320 traV; type IV conjugative transfer system protein TraV K12064 traV; conjugal transfer pilus assembly protein TraV D CI104_27765 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB D CI104_25325 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB D CI104_28315 conjugal transfer protein TraB K12065 traB; conjugal transfer pilus assembly protein TraB D CI104_27770 traK; type-F conjugative transfer system secretin TraK K12066 traK; conjugal transfer pilus assembly protein TraK D CI104_25315 TrhK K12066 traK; conjugal transfer pilus assembly protein TraK D CI104_28310 traK; type-F conjugative transfer system secretin TraK K12066 traK; conjugal transfer pilus assembly protein TraK D CI104_27775 traE; type IV conjugative transfer system protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE D CI104_25310 pilus assembly protein K12067 traE; conjugal transfer pilus assembly protein TraE D CI104_28305 traE; conjugal transfer pilus assembly protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE D CI104_27780 traL; type IV conjugative transfer system protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL D CI104_25305 plasmid transfer protein K12068 traL; conjugal transfer pilus assembly protein TraL D CI104_28300 traL; conjugal transfer pilus assembly protein TraL K12068 traL; conjugal transfer pilus assembly protein TraL D CI104_26025 helicase K12070 traI; conjugal transfer pilus assembly protein TraI D CI104_26020 hypothetical protein K12071 traD; conjugal transfer pilus assembly protein TraD D CI104_21010 bifunctional protein-disulfide isomerase/oxidoreductase DsbC K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CI104_26085 thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D CI104_26055 conjugal transfer protein K12072 traH; conjugative transfer pilus assembly protein TraH D CI104_27680 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH D CI104_28425 conjugal transfer protein TraH K12072 traH; conjugative transfer pilus assembly protein TraH D CI104_24460 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_13250 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_05870 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_05875 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_05935 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_11135 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_08535 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_12730 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_12940 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_09645 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_15680 autotransporter outer membrane beta-barrel domain-containing protein K12678 aidA-I; autotransporter family porin D CI104_14135 hypothetical protein K12678 aidA-I; autotransporter family porin D CI104_05640 hypothetical protein K11891 impL; type VI secretion system protein ImpL D CI104_09755 type VI secretion protein VasK K11891 impL; type VI secretion system protein ImpL D CI104_05625 hypothetical protein K11892 impK; type VI secretion system protein ImpK D CI104_09680 DotU family type IV/VI secretion system protein K11892 impK; type VI secretion system protein ImpK D CI104_05620 type VI secretion system-associated protein K11893 impJ; type VI secretion system protein ImpJ D CI104_09675 type VI secretion system-associated protein K11893 impJ; type VI secretion system protein ImpJ D CI104_05545 sciB domain protein K11895 impH; type VI secretion system protein ImpH D CI104_21610 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D CI104_09770 type VI secretion protein K11895 impH; type VI secretion system protein ImpH D CI104_05550 vasA; type VI secretion system ImpG/VasA family protein K11896 impG; type VI secretion system protein ImpG D CI104_21615 hypothetical protein K11896 impG; type VI secretion system protein ImpG D CI104_09765 vasA; type VI secretion system ImpG/VasA family protein K11896 impG; type VI secretion system protein ImpG D CI104_05555 cytoplasmic protein K11897 impF; type VI secretion system protein ImpF D CI104_05580 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D CI104_09670 EvpB family type VI secretion protein K11900 impC; type VI secretion system protein ImpC D CI104_05575 type VI secretion system-associated protein K11901 impB; type VI secretion system protein ImpB D CI104_09665 type VI secretion system-associated protein K11901 impB; type VI secretion system protein ImpB D CI104_05540 cytoplasmic protein K11902 impA; type VI secretion system protein ImpA D CI104_21625 T6SS protein Cts2A K11902 impA; type VI secretion system protein ImpA D CI104_03390 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D CI104_08655 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D CI104_05610 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D CI104_09690 Hcp1 family type VI secretion system effector K11903 hcp; type VI secretion system secreted protein Hcp D CI104_05675 type VI secretion protein Vgr K11904 vgrG; type VI secretion system secreted protein VgrG D CI104_09700 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D CI104_21600 type IV secretion protein Rhs K11904 vgrG; type VI secretion system secreted protein VgrG D CI104_09780 type VI secretion system lysozyme-like protein K11905 K11905; type VI secretion system protein D CI104_05615 type VI secretion system-associated lipoprotein K11906 vasD; type VI secretion system protein VasD D CI104_09775 type VI secretion system-associated lipoprotein K11906 vasD; type VI secretion system protein VasD D CI104_05570 clpV; ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D CI104_09695 clpV; ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D CI104_21605 clpV; ClpV1 family T6SS ATPase K11907 vasG; type VI secretion system protein VasG D CI104_09760 type VI secretion system ImpA domain-containing protein K11910 vasJ; type VI secretion system protein VasJ D CI104_09785 hypothetical protein K11911 vasL; type VI secretion system protein VasL D CI104_05645 cytoplasmic protein K11890 impM; type VI secretion system protein ImpM D CI104_05560 impE family protein K11898 impE; type VI secretion system protein ImpE D CI104_13690 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_20505 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_20625 fimA; type-1 fimbrial protein subunit A K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_20710 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_15455 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_11405 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_20635 molecular chaperone FimC K07346 fimC; fimbrial chaperone protein D CI104_15515 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D CI104_11395 hypothetical protein K07346 fimC; fimbrial chaperone protein D CI104_13685 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_20515 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CI104_20640 fimbrial protein K07347 fimD; outer membrane usher protein D CI104_20700 fimbrial protein K07347 fimD; outer membrane usher protein D CI104_15465 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_15510 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_11400 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_20645 fimbrial protein K07348 fimF; minor fimbrial subunit D CI104_20650 type 1 fimbrial protein K07349 fimG; minor fimbrial subunit D CI104_20655 fimbrial protein K07350 fimH; minor fimbrial subunit D CI104_15505 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D CI104_15520 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D CI104_15525 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D CI104_22785 outer membrane usher protein K12518 papC; outer membrane usher protein PapC D CI104_22905 PapC/FimD family outer membrane usher protein K12518 papC; outer membrane usher protein PapC D CI104_22780 molecular chaperone K12519 papD; chaperone protein PapD D CI104_22900 molecular chaperone K12519 papD; chaperone protein PapD D CI104_04105 molecular chaperone K12519 papD; chaperone protein PapD D CI104_10260 major curlin subunit CsgA K04334 csgA; major curlin subunit D CI104_10255 csgB; minor curlin subunit CsgB K04335 csgB; minor curlin subunit D CI104_10265 curli assembly protein CsgC K04336 csgC; curli production protein D CI104_10245 curli production assembly/transport protein CsgE K04337 csgE; curli production assembly/transport component CsgE D CI104_10240 curli production assembly/transport protein CsgF K04338 csgF; curli production assembly/transport component CsgF D CI104_10235 curli production assembly/transport protein CsgG K06214 csgG; curli production assembly/transport component CsgG D CI104_04940 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CI104_00660 protein-export protein SecB K03071 secB; preprotein translocase subunit SecB D CI104_06235 secD; protein translocase subunit SecD K03072 secD; preprotein translocase subunit SecD D CI104_23800 protein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CI104_06240 secF; protein translocase subunit SecF K03074 secF; preprotein translocase subunit SecF D CI104_02830 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CI104_04935 secA regulator SecM K13301 secM; secretion monitor D CI104_02145 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CI104_19035 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CI104_01400 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CI104_06230 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CI104_25270 membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CI104_24690 Sec-independent protein translocase protein TatA K03116 tatA; sec-independent protein translocase protein TatA D CI104_24685 tatB; twin-arginine translocase subunit TatB K03117 tatB; sec-independent protein translocase protein TatB D CI104_24680 tatC; twin-arginine translocase subunit TatC K03118 tatC; sec-independent protein translocase protein TatC D CI104_07490 twin-arginine translocase subunit TatE K03425 tatE; sec-independent protein translocase protein TatE C 02042 Bacterial toxins [BR:cfar02042] D CI104_22335 HlyC/CorC family transporter K03699 tlyC; magnesium and cobalt exporter, CNNM family D CI104_19045 magnesium/cobalt efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CI104_21040 hemolysin III family protein K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:cfar02022] D CI104_06135 phoR; PAS domain-containing sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CI104_24410 sensor histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D CI104_06130 phoB; DNA-binding response regulator K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D CI104_10975 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CI104_10980 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D CI104_01725 two-component system sensor histidine kinase EnvZ K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D CI104_01720 DNA-binding response regulator K07659 ompR; two-component system, OmpR family, phosphate regulon response regulator OmpR D CI104_12590 two-component system sensor histidine kinase RstB K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D CI104_12595 DNA-binding response regulator K07661 rstA; two-component system, OmpR family, response regulator RstA D CI104_24230 two-component system sensor histidine kinase CpxA K07640 cpxA; two-component system, OmpR family, sensor histidine kinase CpxA [EC:2.7.13.3] D CI104_24225 DNA-binding response regulator K07662 cpxR; two-component system, OmpR family, response regulator CpxR D CI104_04435 two-component system sensor histidine kinase CreC K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D CI104_04430 DNA-binding response regulator K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D CI104_16625 two-component system sensor histidine kinase BaeA K07642 baeS; two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] D CI104_16630 DNA-binding response regulator K07664 baeR; two-component system, OmpR family, response regulator BaeR D CI104_23025 two-component system sensor histidine kinase BasS K07643 basS; two-component system, OmpR family, sensor histidine kinase BasS [EC:2.7.13.3] D CI104_23020 DNA-binding response regulator K07771 basR; two-component system, OmpR family, response regulator BasR D CI104_26305 sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CI104_07050 two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CI104_07055 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D CI104_03895 two-component system sensor histidine kinase QseC K07645 qseC; two-component system, OmpR family, sensor histidine kinase QseC [EC:2.7.13.3] D CI104_20230 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D CI104_03900 DNA-binding response regulator K07666 qseB; two-component system, OmpR family, response regulator QseB D CI104_07790 two-component system sensor histidine kinase KdbD K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D CI104_07785 DNA-binding response regulator K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D CI104_02655 aerobic respiration two-component sensor histidine kinase ArcB K07648 arcB; two-component system, OmpR family, aerobic respiration control sensor histidine kinase ArcB [EC:2.7.13.3] D CI104_04445 DNA-binding response regulator K07773 arcA; two-component system, OmpR family, aerobic respiration control protein ArcA D CI104_14375 nitrate/nitrite two-component system sensor histidine kinase NarX K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D CI104_14380 DNA-binding response regulator K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D CI104_18350 nitrate/nitrite two-component system sensor histidine kinase NarQ K07674 narQ; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarQ [EC:2.7.13.3] D CI104_17105 DNA-binding response regulator K07685 narP; two-component system, NarL family, nitrate/nitrite response regulator NarP D CI104_00200 signal transduction histidine-protein kinase/phosphatase UhpB K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D CI104_00195 DNA-binding response regulator K07686 uhpA; two-component system, NarL family, uhpT operon response regulator UhpA D CI104_05960 sensor histidine kinase K20263 fusK; two-component system, NarL family, sensor histidine kinase FusK [EC:2.7.13.3] D CI104_05965 DNA-binding response regulator K20264 fusR; two-component system, NarL family, response regulator FusR D CI104_17240 two-component system sensor histidine kinase/response regulator K07677 rcsC; two-component system, NarL family, capsular synthesis sensor histidine kinase RcsC [EC:2.7.13.3] D CI104_17230 phosphotransferase RcsD K07676 rcsD; two-component system, NarL family, sensor histidine kinase RcsD [EC:2.7.13.3] D CI104_17235 DNA-binding response regulator K07687 rcsB; two-component system, NarL family, captular synthesis response regulator RcsB D CI104_20060 hybrid sensor histidine kinase/response regulator K07678 barA; two-component system, NarL family, sensor histidine kinase BarA [EC:2.7.13.3] D CI104_15755 DNA-binding response regulator K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D CI104_20720 histidine kinase K07679 evgS; two-component system, NarL family, sensor histidine kinase EvgS [EC:2.7.13.3] D CI104_20725 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D CI104_07455 dpiB; histidine kinase K07700 dpiB; two-component system, CitB family, cit operon sensor histidine kinase CitA [EC:2.7.13.3] D CI104_07460 dpiA; response regulator K07702 dpiA; two-component system, CitB family, response regulator CitB D CI104_22950 two-component system sensor histidine kinase DcuS K07701 dcuS; two-component system, CitB family, sensor histidine kinase DcuS [EC:2.7.13.3] D CI104_22955 two-component system response regulator DcuR K07703 dcuR; two-component system, CitB family, response regulator DcuR D CI104_17950 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CI104_16725 sensor histidine kinase K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D CI104_17955 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator D CI104_16720 DNA-binding response regulator K02477 K02477; two-component system, LytTR family, response regulator D CI104_24535 PAS domain-containing sensor histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D CI104_24540 nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D CI104_23670 two-component sensor histidine kinase K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3] D CI104_23665 two-component system response regulator K07713 zraR; two-component system, NtrC family, response regulator HydG D CI104_17245 PAS domain-containing sensor histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CI104_17250 sigma-54-dependent Fis family transcriptional regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CI104_18745 sensor histidine kinase K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D CI104_18735 two-component system response regulator GlrR K07715 glrR; two-component system, NtrC family, response regulator GlrR D CI104_15480 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CI104_15485 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CI104_17485 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CI104_12220 sensor histidine kinase K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D CI104_12225 DNA-binding response regulator K13041 ttrR; two-component system, LuxR family, response regulator TtrR D CI104_14315 response regulator K02485 rssB; two-component system, response regulator C 02035 Bacterial motility proteins [BR:cfar02035] D CI104_15535 chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW D CI104_15490 protein-glutamate O-methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D CI104_15485 chemotaxis response regulator protein-glutamate methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D CI104_15480 chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D CI104_15475 protein phosphatase CheZ K03414 cheZ; chemotaxis protein CheZ D CI104_17485 chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D CI104_14525 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_27575 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_04010 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_13060 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein D CI104_12905 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CI104_21365 methyl-accepting chemotaxis protein II K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CI104_22235 methyl-accepting chemotaxis protein K05874 tsr; methyl-accepting chemotaxis protein I, serine sensor receptor D CI104_03370 methyl-accepting chemotaxis protein K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D CI104_15500 methyl-accepting chemotaxis protein II K05875 tar; methyl-accepting chemotaxis protein II, aspartate sensor receptor D CI104_13570 methyl-accepting chemotaxis protein K05876 trg; methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor D CI104_15495 methyl-accepting chemotaxis protein K05877 tap; methyl-accepting chemotaxis protein IV, peptide sensor receptor D CI104_03365 hypothetical protein K03776 aer; aerotaxis receptor D CI104_13305 hypothetical protein K03776 aer; aerotaxis receptor D CI104_15855 flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D CI104_15860 fliI; flagellum-specific ATP synthase FliL K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CI104_15865 fliJ; flagellar protein FliJ K02413 fliJ; flagellar protein FliJ D CI104_15890 fliO; flagellar type III secretion system protein FliO K02418 fliO; flagellar protein FliO/FliZ D CI104_15895 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP D CI104_15900 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D CI104_15905 fliR; flagellar type III secretion system protein FliR K02421 fliR; flagellar biosynthesis protein FliR D CI104_05740 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CI104_15445 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D CI104_15450 flagellar type III secretion system protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D CI104_15440 flagellar protein FlhE K03516 flhE; flagellar protein FlhE D CI104_15850 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D CI104_15880 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D CI104_15885 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN D CI104_15845 flagellar basal body M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF D CI104_10460 flgI; flagellar biosynthesis protein FlgA K02394 flgI; flagellar P-ring protein FlgI D CI104_10415 flagellar basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D CI104_10455 flagellar basal body L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH D CI104_15875 fliL; flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D CI104_15840 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D CI104_15870 flagellar hook-length control protein FliK K02414 fliK; flagellar hook-length control protein FliK D CI104_10425 flagellar basal body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D CI104_10430 flgC; flagellar basal body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D CI104_10435 flgD; flagellar hook assembly protein FlgD K02389 flgD; flagellar basal-body rod modification protein FlgD D CI104_10445 flgF; flagellar basal body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF D CI104_10450 flgG; flagellar basal body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG D CI104_10465 flgJ; flagellar assembly peptidoglycan hydrolase FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ D CI104_10440 flgE; flagellar hook protein FlgE K02390 flgE; flagellar hook protein FlgE D CI104_10470 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1 D CI104_10475 flgL; flagellar hook-filament junction protein FlgL K02397 flgL; flagellar hook-associated protein 3 FlgL D CI104_10405 flagella biosynthesis chaperone FlgN K02399 flgN; flagellar biosynthesis protein FlgN D CI104_15800 flagellin FliC K02406 fliC; flagellin D CI104_15805 flagellar filament capping protein FliD K02407 fliD; flagellar hook-associated protein 2 D CI104_15810 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D CI104_15815 flagella biosynthesis regulatory protein FliT K02423 fliT; flagellar protein FliT D CI104_26405 transcriptional regulator K02403 flhD; flagellar transcriptional activator FlhD D CI104_15560 flagellar transcriptional activator FlhD K02403 flhD; flagellar transcriptional activator FlhD D CI104_15555 flagellar transcriptional regulator FlhC K02402 flhC; flagellar transcriptional activator FlhC D CI104_15795 fliA; RNA polymerase sigma factor FliA K02405 fliA; RNA polymerase sigma factor FliA D CI104_15550 motA; flagellar motor stator protein MotA K02556 motA; chemotaxis protein MotA D CI104_05745 putative lateral flagellar export/assembly protein LafU K02557 motB; chemotaxis protein MotB D CI104_15545 motB; motility protein MotB K02557 motB; chemotaxis protein MotB D CI104_15785 cystine ABC transporter substrate-binding protein K02424 tcyA; L-cystine transport system substrate-binding protein D CI104_15790 flagella biosynthesis regulatory protein FliZ K02425 fliZ; regulator of sigma S factor FliZ D CI104_10410 anti-sigma-28 factor FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM D CI104_04200 type IV pili twitching motility protein PilT K02669 pilT; twitching motility protein PilT D CI104_13690 hypothetical protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_20505 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_20625 fimA; type-1 fimbrial protein subunit A K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_20710 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_15455 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_11405 type 1 fimbrial protein K07345 fimA; major type 1 subunit fimbrin (pilin) D CI104_20635 molecular chaperone FimC K07346 fimC; fimbrial chaperone protein D CI104_15515 sigma-fimbriae chaperone protein K07346 fimC; fimbrial chaperone protein D CI104_11395 hypothetical protein K07346 fimC; fimbrial chaperone protein D CI104_13685 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_20515 fimbrial assembly protein K07347 fimD; outer membrane usher protein D CI104_20640 fimbrial protein K07347 fimD; outer membrane usher protein D CI104_20700 fimbrial protein K07347 fimD; outer membrane usher protein D CI104_15465 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_15510 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_11400 fimbrial biogenesis outer membrane usher protein K07347 fimD; outer membrane usher protein D CI104_20645 fimbrial protein K07348 fimF; minor fimbrial subunit D CI104_20650 type 1 fimbrial protein K07349 fimG; minor fimbrial subunit D CI104_20655 fimbrial protein K07350 fimH; minor fimbrial subunit D CI104_20630 type 1 fimbrial protein K07351 fimI; fimbrial protein D CI104_15505 fimbrial protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D CI104_15520 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 D CI104_15525 SCPU domain-containing protein K27078 cupE; spore coat protein U domain-containing protein, fimbrial subunit CupE1/2/3/6 C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:cfar04812] D CI104_02465 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CI104_25380 stbA family protein K18640 parM; plasmid segregation protein ParM D CI104_28065 StbA family protein K18640 parM; plasmid segregation protein ParM D CI104_04925 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CI104_04920 cell division protein FtsA K03590 ftsA; cell division protein FtsA D CI104_14670 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D CI104_14675 minD; septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D CI104_14680 cell division topological specificity factor K03608 minE; cell division topological specificity factor D CI104_26450 ParA family protein K03496 parA; chromosome partitioning protein D CI104_27970 plasmid-partitioning protein SopA K03496 parA; chromosome partitioning protein D CI104_28045 ParA family protein K03496 parA; chromosome partitioning protein D CI104_27860 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_27965 plasmid-partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_25355 peptide transporter K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_28050 chromosome partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CI104_28185 hypothetical protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:cfar04147] D CI104_06635 molecular chaperone HtpG K04079 HSP90A; molecular chaperone HtpG D CI104_20035 phosphopyruvate hydratase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CI104_11625 gap; aldehyde dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CI104_13600 gap; type I glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CI104_04340 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CI104_12170 pyruvate kinase PykF K00873 PK; pyruvate kinase [EC:2.7.1.40] D CI104_15330 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CI104_01880 peptidylprolyl isomerase A K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] D CI104_06210 peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CI104_22685 groL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CI104_04510 molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CI104_23465 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CI104_18505 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D CI104_02015 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CI104_23805 tuf; elongation factor Tu K02358 tuf; elongation factor Tu D CI104_10585 histidine triad nucleotide-binding protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CI104_18095 bile acid:sodium symporter K14347 SLC10A7; solute carrier family 10 (sodium/bile acid cotransporter), member 7 D CI104_15065 long-chain-fatty-acid--CoA ligase FadD K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D CI104_01615 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_20455 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_17270 acetyl-CoA C-acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D CI104_06645 adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CI104_06615 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7] D CI104_23955 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D CI104_02875 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D CI104_20920 hydA; dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2] D CI104_22230 class 1 fructose-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D CI104_08175 galactokinase K00849 galK; galactokinase [EC:2.7.1.6] D CI104_01545 glgB; glycogen-branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CI104_24140 glpK; glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CI104_07250 carbohydrate kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D CI104_24530 glnA; glutamate--ammonia ligase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D CI104_06000 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CI104_06065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CI104_21120 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399] D CI104_23655 purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D CI104_05020 lpdA; dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CI104_04665 nitrogen fixation protein FixB K03522 fixB; electron transfer flavoprotein alpha subunit D CI104_15320 zwf; glucose-6-phosphate dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CI104_24165 triose-phosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CI104_08160 gpmA; 2,3-diphosphoglycerate-dependent phosphoglycerate mutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CI104_22635 hypothetical protein K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:cfar02048] D CI104_21410 type I restriction endonuclease subunit R K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D CI104_21405 hypothetical protein K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D CI104_21400 restriction endonuclease subunit M K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D CI104_09400 DNA methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_27145 DNA modification methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_01805 adenine-specific DNA-methyltransferase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_10710 restriction endonuclease subunit M K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_06845 adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_03460 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CI104_11115 DNA adenine methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CI104_02345 adenine-specific DNA-methyltransferase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CI104_27910 DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CI104_28085 DNA methylase K07319 yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CI104_15955 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_26260 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_27945 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_11075 DNA cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D CI104_25915 Hok/Gef family protein K18921 hokB; protein HokB D CI104_07215 Hok/Gef family protein K18922 hokE; protein HokE D CI104_19790 type I addiction module toxin, SymE family K19048 symE; toxic protein SymE D CI104_01020 small toxic polypeptide LdrD K18862 ldrA_B_C_D; small toxic polypeptide LdrA/B/C/D D CI104_00150 type I toxin-antitoxin system toxin TisB K19148 tisB; small toxic protein TisB D CI104_16050 pemk protein K18841 chpB; mRNA interferase ChpB [EC:3.1.-.-] D CI104_16045 antitoxin K18842 chpS; antitoxin ChpS D CI104_25910 mRNA interferase RelE K06218 relE; mRNA interferase RelE/StbE D CI104_25905 antitoxin RelB K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB D CI104_25605 type II toxin-antitoxin system YafQ family toxin K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D CI104_26665 toxin HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CI104_13005 serine/threonine protein kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D CI104_26670 XRE family transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D CI104_13000 transcriptional regulator K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB D CI104_13425 type II toxin-antitoxin system HicA family toxin K07339 hicA; mRNA interferase HicA [EC:3.1.-.-] D CI104_13420 type II toxin-antitoxin system HicB family antitoxin K18843 hicB; antitoxin HicB D CI104_06565 hemolysin expression-modulating protein Hha K05839 hha; haemolysin expression modulating protein D CI104_25560 hypothetical protein K05839 hha; haemolysin expression modulating protein D CI104_06570 Hha toxicity attenuator K19162 tomB; hha toxicity modulator TomB D CI104_13980 envelope stress response membrane protein PspC K03973 pspC; phage shock protein C D CI104_13985 envelope stress response membrane protein PspB K03970 pspB; phage shock protein B D CI104_03300 mRNA interferase HigB K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D CI104_27035 toxin-plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1 D CI104_13125 Killer protein K07334 higB-1; toxin HigB-1 D CI104_03305 transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D CI104_13130 higA; transcriptional regulator K21498 higA-1; antitoxin HigA-1 D CI104_28685 PIN domain nuclease K18828 mvpA; tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-] D CI104_28690 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D CI104_26420 AbrB/MazE/SpoVT family DNA-binding domain-containing protein K18829 mvpT; antitoxin VapB D CI104_22040 YhcH/YjgK/YiaL family protein K19334 tabA; biofilm protein TabA D CI104_08435 DUF1471 domain-containing protein K13650 mcbA; MqsR-controlled colanic acid and biofilm protein A D CI104_10355 bssS; transcriptional regulator K12148 bssS; biofilm regulator BssS D CI104_08600 bssR; transcriptional regulator K19688 bssR; biofilm regulator BssR D CI104_10895 DUF1471 domain-containing protein K12151 bhsA; multiple stress resistance protein BhsA D CI104_04925 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CI104_02465 rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D CI104_03910 parC; DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CI104_03855 parE; DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CI104_18040 glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CI104_21730 toxin K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D CI104_19365 toxin K18837 cbtA; cytoskeleton-binding toxin CbtA and related proteins D CI104_21735 type IV toxin-antitoxin system YeeU family antitoxin K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins D CI104_19360 hypothetical protein K18838 cbeA; cytoskeleton bundling-enhancing protein CbeA and related proteins D CI104_21025 hypothetical protein K19168 cptA; toxin CptA D CI104_21030 hypothetical protein K09159 cptB; antitoxin CptB D CI104_18620 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CI104_21905 hypothetical protein K19169 dndB; DNA sulfur modification protein DndB C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes [BR:cfar01504] D CI104_28625 class A broad-spectrum beta-lactamase TEM-1 K18698 blaTEM; beta-lactamase class A TEM [EC:3.5.2.6] D CI104_27485 class A broad-spectrum beta-lactamase TEM-1 K18698 blaTEM; beta-lactamase class A TEM [EC:3.5.2.6] D CI104_26520 class A broad-spectrum beta-lactamase TEM-1 K18698 blaTEM; beta-lactamase class A TEM [EC:3.5.2.6] D CI104_26785 class A broad-spectrum beta-lactamase TEM-1 K18698 blaTEM; beta-lactamase class A TEM [EC:3.5.2.6] D CI104_19205 class A extended-spectrum beta-lactamase SHV-12 K18699 blaSHV; beta-lactamase class A SHV [EC:3.5.2.6] D CI104_26890 class A extended-spectrum beta-lactamase SHV-12 K18699 blaSHV; beta-lactamase class A SHV [EC:3.5.2.6] D CI104_28570 carbapenem-hydrolyzing class A beta-lactamase KPC-2 K18768 blaKPC; beta-lactamase class A KPC [EC:3.5.2.6] D CI104_26860 oxacillin-hydrolyzing class D beta-lactamase OXA-1 K18790 blaOXA-1; beta-lactamase class D OXA-1 [EC:3.5.2.6] D CI104_26755 aminoglycoside N-acetyltransferase AAC(3)-IId K19275 aac3-II; aminoglycoside 3-N-acetyltransferase II [EC:2.3.1.81] D CI104_19135 AAC(3)-II family aminoglycoside N-acetyltransferase K19275 aac3-II; aminoglycoside 3-N-acetyltransferase II [EC:2.3.1.81] D CI104_19120 aacA4; aminoglycoside N-acetyltransferase AAC(6')-IIc K19278 aac6-Ib; aminoglycoside 6'-N-acetyltransferase Ib [EC:2.3.1.82] D CI104_25585 aacA4; aminoglycoside N-acetyltransferase AAC(6')-Ib3 K19278 aac6-Ib; aminoglycoside 6'-N-acetyltransferase Ib [EC:2.3.1.82] D CI104_26865 aacA4; fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5 K19278 aac6-Ib; aminoglycoside 6'-N-acetyltransferase Ib [EC:2.3.1.82] D CI104_25625 ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2 K00984 aadA; streptomycin 3"-adenylyltransferase [EC:2.7.7.47] D CI104_25745 aminoglycoside O-phosphotransferase APH(3'')-Ib K10673 strA; streptomycin 3"-kinase [EC:2.7.1.87] D CI104_25750 aminoglycoside O-phosphotransferase APH(6)-Id K04343 strB; streptomycin 6-kinase [EC:2.7.1.72] D CI104_27430 tetracycline efflux MFS transporter Tet(D) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D CI104_25780 tetracycline efflux MFS transporter Tet(D) K08151 tetA; MFS transporter, DHA1 family, tetracycline resistance protein D CI104_08635 multidrug transporter MdfA K08160 mdfA; MFS transporter, DHA1 family, multidrug/chloramphenicol efflux transport protein D CI104_26740 Mph(A) family macrolide 2'-phosphotransferase K06979 mph; macrolide phosphotransferase D CI104_27410 type A-2 chloramphenicol O-acetyltransferase CatII K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D CI104_26930 type A-2 chloramphenicol O-acetyltransferase CatII K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28] D CI104_26855 type B-3 chloramphenicol O-acetyltransferase CatB3 K00638 catB; chloramphenicol O-acetyltransferase type B [EC:2.3.1.28] D CI104_19160 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_25635 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_25685 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_25715 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_26840 sulfonamide-resistant dihydropteroate synthase Sul1 K18974 sul1; dihydropteroate synthase type 1 [EC:2.5.1.15] D CI104_27365 folP; sulfonamide-resistant dihydropteroate synthase Sul2 K18824 sul2; dihydropteroate synthase type 2 [EC:2.5.1.15] D CI104_25730 trimethoprim-resistant dihydrofolate reductase DfrA19 K19644 dfrA19; dihydrofolate reductase (trimethoprim resistance protein) [EC:1.5.1.3] D CI104_13170 MFS transporter K08167 smvA; MFS transporter, DHA2 family, multidrug resistance protein D CI104_25665 quinolone resistance pentapeptide repeat protein QnrA1 K18555 qnr; fluoroquinolone resistance protein D CI104_25695 quinolone resistance pentapeptide repeat protein QnrA1 K18555 qnr; fluoroquinolone resistance protein D CI104_26850 NAD(+)--rifampin ADP-ribosyltransferase Arr-3 K21288 arr2; rifampin ADP-ribosylating transferase D CI104_14705 SED family class A beta-lactamase K17836 penP; beta-lactamase class A [EC:3.5.2.6] D CI104_26305 sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CI104_07050 two-component sensor histidine kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D CI104_07055 DNA-binding response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D CI104_13075 D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22] D CI104_10975 two-component system sensor histidine kinase PhoQ K07637 phoQ; two-component system, OmpR family, sensor histidine kinase PhoQ [EC:2.7.13.3] D CI104_10980 DNA-binding response regulator K07660 phoP; two-component system, OmpR family, response regulator PhoP D CI104_06580 MexE family multidrug efflux RND transporter periplasmic adaptor subunit K03585 acrA; membrane fusion protein, multidrug efflux system D CI104_06575 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CI104_08505 multidrug efflux RND transporter permease subunit K18138 acrB; multidrug efflux pump D CI104_13630 transporter K18139 oprM; outer membrane protein, multidrug efflux system D CI104_06895 cueR; HTH-type transcriptional regulator CueR K19591 cueR; MerR family transcriptional regulator, copper efflux regulator D CI104_02325 MexX family efflux pump subunit K18141 acrE; membrane fusion protein, multidrug efflux system D CI104_02320 multidrug efflux RND transporter permease subunit K18142 acrF; multidrug efflux pump D CI104_03830 outer membrane channel protein TolC K12340 tolC; outer membrane protein D CI104_20725 DNA-binding response regulator K07690 evgA; two-component system, NarL family, response regulator EvgA D CI104_12875 MDR efflux pump AcrAB transcriptional activator MarA K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator D CI104_14545 AraC family transcriptional regulator K13632 marA; AraC family transcriptional regulator, mar-sox-rob regulon activator C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins [BR:cfar00536] C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cfar00537] D CI104_06065 alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D CI104_14590 treA; alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] D CI104_01145 treF; alpha,alpha-trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins [BR:cfar03200] D CI104_11150 terminase K21512 A; Enterobacteria phage terminase large subunit [EC:3.1.21.4] D CI104_11165 capsid assembly protein K21511 C; Enterobacteria phage capsid assembly protease [EC:3.4.21.-] D CI104_11170 Head decoration protein K26962 D; Enterobacteria phage capsid decoration protein D CI104_11160 phage portal protein K26963 B; Enterobacteria phage portal protein D CI104_11155 phage tail protein K26964 W; Enterobacteria phage head completion protein D CI104_11270 hypothetical protein K26965 FI; Enterobacteria phage DNA-packaging protein FI D CI104_11275 phage tail protein K26966 FII; Enterobacteria phage head-tail connector protein FII D CI104_11280 phage tail protein K26967 Z; Enterobacteria phage tail completion protein D CI104_11290 phage tail protein K26969 V; Enterobacteria phage tail tube protein D CI104_11295 phage minor tail protein G K26970 G; Enterobacteria phage tail assembly protein G D CI104_11305 phage tail tape measure protein K26972 H; Enterobacteria phage tape measure protein C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:cfar03100] D CI104_18020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_18025 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_02265 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_23865 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_24615 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CI104_19655 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_17860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_24860 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_19660 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_19665 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_19670 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_07035 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CI104_15990 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CI104_16005 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CI104_16055 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CI104_16065 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CI104_05480 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CI104_05535 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CI104_25045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CI104_15735 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CI104_07635 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CI104_07650 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CI104_07655 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CI104_07640 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CI104_18930 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CI104_05465 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CI104_23645 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CI104_25060 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CI104_20875 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_15740 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_23815 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_22570 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_22575 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_22580 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CI104_24855 tRNA-His K14226 tRNA-His; tRNA His D CI104_02260 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CI104_23870 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CI104_24620 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CI104_21930 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_02835 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_15730 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_07660 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_21240 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_21245 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_21250 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_24850 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CI104_08090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_08100 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_08105 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_08110 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_18060 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CI104_07645 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_02880 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_03640 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_07665 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_20280 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_20285 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_20290 tRNA-Met K14230 tRNA-Met; tRNA Met D CI104_04110 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CI104_22730 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CI104_00955 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CI104_17085 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CI104_24845 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CI104_19675 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_08870 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_10210 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_15980 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_09320 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CI104_23825 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CI104_02280 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CI104_05790 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CI104_23810 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CI104_25040 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CI104_23820 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CI104_14335 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CI104_14340 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CI104_08095 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_12325 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_12320 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_18045 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_18050 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_18055 tRNA-Val K14237 tRNA-Val; tRNA Val D CI104_00395 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D CI104_18935 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_25065 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_24625 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_05460 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_23650 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CI104_24610 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_05470 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_23860 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_25055 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_02270 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CI104_24605 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CI104_02275 rrf; 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CI104_06515 ffs; signal recognition particle sRNA small type K01983 ffs; SRP RNA D CI104_03140 rnpB; RNase P RNA component class A K01978 rnpB; M1 RNA D CI104_19245 ssrA; transfer-messenger RNA K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CI104_21950 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D CI104_12975 gluconate 5-dehydrogenase K00046 idnO; gluconate 5-dehydrogenase [EC:1.1.1.69] D CI104_21945 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D CI104_12985 L-idonate 5-dehydrogenase K00098 idnD; L-idonate 5-dehydrogenase [EC:1.1.1.264] D CI104_03935 2,5-didehydrogluconate reductase DkgA K06221 dkgA; 2,5-diketo-D-gluconate reductase A [EC:1.1.1.346] D CI104_05485 2,5-didehydrogluconate reductase B K06222 dkgB; 2,5-diketo-D-gluconate reductase B [EC:1.1.1.346] D CI104_05055 pdxA; D-threonate 4-phosphate dehydrogenase K22024 pdxA2; 4-phospho-D-threonate 3-dehydrogenase / 4-phospho-D-erythronate 3-dehydrogenase [EC:1.1.1.408 1.1.1.409] D CI104_19190 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D CI104_26905 NAD(P)-dependent oxidoreductase K08319 ltnD; L-threonate 2-dehydrogenase [EC:1.1.1.411] D CI104_04000 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CI104_17995 L-glyceraldehyde 3-phosphate reductase K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-] D CI104_08605 oxidoreductase K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-] D CI104_06295 aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D CI104_03310 fadH; NADPH-dependent 2,4-dienoyl-CoA reductase K00219 fadH; 2,4-dienoyl-CoA reductase (NADPH2) [EC:1.3.1.34] D CI104_13330 NADP-dependent oxidoreductase K23256 curA; NADPH-dependent curcumin reductase [EC:1.3.1.-] D CI104_04650 crotonobetainyl-CoA--carnitine CoA-transferase K08297 caiA; crotonobetainyl-CoA dehydrogenase [EC:1.3.8.13] D CI104_10350 N-methyl-L-tryptophan oxidase K02846 solA; N-methyl-L-tryptophan oxidase [EC:1.5.3.-] D CI104_12030 FAD-dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D CI104_04670 FAD-dependent oxidoreductase K00313 fixC; electron transfer flavoprotein-quinone oxidoreductase [EC:1.5.5.-] D CI104_23345 quinone oxidoreductase K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D CI104_03890 flavodoxin family protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10] D CI104_13640 FMN-dependent NADH-azoreductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D CI104_07385 alkyl hydroperoxide reductase subunit F K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D CI104_22300 peptide-methionine (S)-S-oxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D CI104_11630 msrB; peptide-methionine (R)-S-oxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D CI104_17650 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D CI104_04060 thiol:disulfide oxidoreductase K11209 yghU; GSH-dependent disulfide-bond oxidoreductase [EC:1.8.4.-] D CI104_03205 glutathione-dependent reductase K07393 ECM4; glutathionyl-hydroquinone reductase [EC:1.8.5.7] D CI104_02440 protein-methionine-sulfoxide reductase catalytic subunit MsrP K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D CI104_13595 cytochrome B K12262 cybB; superoxide oxidase [EC:1.10.3.17] D CI104_01150 cytochrome-c peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5] D CI104_07405 alpha/beta hydrolase K00433 cpo; non-heme chloroperoxidase [EC:1.11.1.10] D CI104_18410 peroxiredoxin K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CI104_13870 lipid hydroperoxide peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D CI104_07380 ahpC; peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D CI104_13105 OsmC family peroxiredoxin K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D CI104_18195 peroxidase K07223 yfeX; porphyrinogen peroxidase [EC:1.11.1.-] D CI104_01515 pirin family protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D CI104_18725 flavohemoprotein K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17] D CI104_28660 mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D CI104_26605 merA; mercury(II) reductase K00520 merA; mercuric reductase [EC:1.16.1.1] D CI104_03380 NADPH-dependent ferric siderophore reductase K07229 yqjH; ferric-chelate reductase (NADPH) [EC:1.16.1.9] D CI104_15635 ferritin K02217 ftnA; ferritin [EC:1.16.3.2] D CI104_05085 multicopper oxidase CueO K14588 cueO; cuproxidase [EC:1.16.3.4] D CI104_24150 ferredoxin--NADP(+) reductase K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D CI104_19760 NADH:flavorubredoxin reductase NorW K12265 norW; nitric oxide reductase FlRd-NAD(+) reductase [EC:1.18.1.-] D CI104_26200 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CI104_20850 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CI104_18425 arsC; arsenate reductase (glutaredoxin) K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1] D CI104_22140 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4] D CI104_09000 pflA; pyruvate formate lyase 1-activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CI104_23995 [formate-C-acetyltransferase]-activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CI104_08550 glycyl-radical enzyme activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D CI104_08805 hybrid-cluster NAD(P)-dependent oxidoreductase K11933 hcr; NADH oxidoreductase Hcr [EC:1.-.-.-] D CI104_19930 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D CI104_12340 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D CI104_12950 trans-aconitate 2-methyltransferase K00598 tam; trans-aconitate 2-methyltransferase [EC:2.1.1.144] D CI104_13475 tellurite resistance methyltransferase TehB K16868 tehB; tellurite methyltransferase [EC:2.1.1.265] D CI104_10285 glucans biosynthesis protein C K11941 mdoC; glucans biosynthesis protein C [EC:2.1.-.-] D CI104_06560 maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79] D CI104_13255 N-hydroxyarylamine O-acetyltransferase K00675 nhoA; N-hydroxyarylamine O-acetyltransferase [EC:2.3.1.118] D CI104_07605 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CI104_02955 N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D CI104_00930 N-acetyltransferase K03826 yiaC; putative acetyltransferase [EC:2.3.1.-] D CI104_23630 acetyltransferase K03827 yjaB; putative acetyltransferase [EC:2.3.1.-] D CI104_22005 N-acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-] D CI104_13340 N-acetyltransferase K24217 mnaT; L-amino acid N-acyltransferase [EC:2.3.1.-] D CI104_08890 leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D CI104_13935 family 65 glycosyl hydrolase K10231 kojP; kojibiose phosphorylase [EC:2.4.1.230] D CI104_03350 glycosidase K20885 K20885; beta-1,2-mannobiose phosphorylase / 1,2-beta-oligomannan phosphorylase [EC:2.4.1.339 2.4.1.340] D CI104_13970 sugar phosphorylase K22597 E2.4.1.352; glucosylglycerate phosphorylase [EC:2.4.1.352] D CI104_18895 DTW domain-containing protein K05812 DTWD2; tRNA-uridine aminocarboxypropyltransferase [EC:2.5.1.25] D CI104_20355 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CI104_16245 ATP--cob(I)alamin adenosyltransferase K27270 pduO; corrinoid adenosyltransferase [EC:2.5.1.-] D CI104_17220 FAD:protein FMN transferase K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CI104_24470 sugar kinase K18478 yihV; sulfofructose kinase [EC:2.7.1.184] D CI104_07965 hypothetical protein K21948 otnK; 3-dehydrotetronate 4-kinase [EC:2.7.1.217] D CI104_01830 fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D CI104_00385 fructoselysine 6-kinase K10710 frlD; fructoselysine 6-kinase [EC:2.7.1.218] D CI104_05050 hypothetical protein K22129 dtnK; D-threonate/D-erythronate kinase [EC:2.7.1.219 2.7.1.220] D CI104_24190 aminoimidazole riboside kinase K23147 E2.7.1.223; aminoimidazole riboside kinase [EC:2.7.1.223] D CI104_12010 phosphoenolpyruvate synthase regulatory protein K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D CI104_03775 glutamine-synthetase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D CI104_13050 diguanylate cyclase K13069 E2.7.7.65; diguanylate cyclase [EC:2.7.7.65] D CI104_11995 SELO family protein K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D CI104_21330 phosphatidylglycerol--membrane-oligosaccharide glycerophosphotransferase K01002 mdoB; phosphoglycerol transferase [EC:2.7.8.20] D CI104_23610 bifunctional isocitrate dehydrogenase kinase/phosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D CI104_21645 CoA transferase K18702 uctC; CoA:oxalate CoA-transferase [EC:2.8.3.19] D CI104_04645 crotonobetainyl-CoA--carnitine CoA-transferase K08298 caiB; L-carnitine CoA-transferase [EC:2.8.3.21] D CI104_10275 O-acetyl-ADP-ribose deacetylase K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D CI104_07285 enterochelin esterase K07214 fes; iron(III)-enterobactin esterase [EC:3.1.1.108] D CI104_06660 acetyl esterase K01066 aes; acetyl esterase [EC:3.1.1.-] D CI104_13540 carboxylesterase/lipase family protein K03929 pnbA; para-nitrobenzyl esterase [EC:3.1.1.-] D CI104_01295 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CI104_08055 ybgC; tol-pal system-associated acyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D CI104_15250 protein-serine/threonine phosphatase K07313 pphA; serine/threonine protein phosphatase 1 [EC:3.1.3.16] D CI104_08540 sugar-phosphatase K07757 ybiV; sugar-phosphatase [EC:3.1.3.23] D CI104_14165 PHP domain-containing protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D CI104_17825 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D CI104_13055 oxygen-sensing cyclic-di-GMP phosphodiesterase K13243 dos; c-di-GMP-specific phosphodiesterase [EC:3.1.4.52] D CI104_19465 cyclic diguanylate phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CI104_17015 phage resistance protein K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CI104_23290 cyclic diguanylate phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CI104_06545 cyclic diguanylate phosphodiesterase K26148 K26148; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CI104_18015 sensor domain-containing phosphodiesterase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CI104_18490 sensor domain-containing phosphodiesterase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CI104_01070 phosphodiesterase K26149 K26149; c-di-GMP phosphodiesterase [EC:3.1.4.52] D CI104_13275 alkyl/aryl-sulfatase K25227 sdsA1; linear primary-alkylsulfatase [EC:3.1.6.21] D CI104_04225 deoxyribonuclease I K01150 endA; deoxyribonuclease I [EC:3.1.21.1] D CI104_24675 3'-5' ssDNA/RNA exonuclease TatD K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CI104_10570 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CI104_21195 metal-dependent hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CI104_26255 nuclease K01174 nuc; micrococcal nuclease [EC:3.1.31.1] D CI104_07760 alpha/beta hydrolase K01175 ybfF; esterase [EC:3.1.-.-] D CI104_05765 frsA; fermentation/respiration switch protein K11750 frsA; esterase FrsA [EC:3.1.-.-] D CI104_01060 cellulase K20542 bcsZ; endoglucanase [EC:3.2.1.4] D CI104_03535 glycoside hydrolase K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CI104_11125 lysozyme K01185 E3.2.1.17; lysozyme [EC:3.2.1.17] D CI104_15430 glycoside hydrolase family 105 protein K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172] D CI104_00405 alpha-xylosidase K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177] D CI104_03875 glucuronyl hydrolase K18581 ugl; unsaturated chondroitin disaccharide hydrolase [EC:3.2.1.180] D CI104_24500 alpha-glucosidase K15922 yihQ; sulfoquinovosidase [EC:3.2.1.199] D CI104_02215 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CI104_11860 chitin disaccharide deacetylase K03478 chbG; chitin disaccharide deacetylase [EC:3.5.1.105] D CI104_07485 hydrolase K11206 NIT1; deaminated glutathione amidase [EC:3.5.1.128] D CI104_21045 ASCH domain-containing protein K09900 E3.5.1.135; N4-acetylcytidine amidohydrolase [EC:3.5.1.135] D CI104_22095 2-iminobutanoate/2-iminopropanoate deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CI104_15670 RidA family protein K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10] D CI104_03010 galactosamine-6-phosphate isomerase K02080 agaI; putative deaminase/isomerase [EC:3.5.99.-] D CI104_01840 frlB; fructoselysine-6-P-deglycase K10708 frlB; fructoselysine 6-phosphate deglycase [EC:3.5.-.-] D CI104_03770 inorganic triphosphatase K18446 ygiF; triphosphatase [EC:3.6.1.25] D CI104_16505 GDP-mannose mannosyl hydrolase K03207 gmm; GDP-mannose mannosyl hydrolase [EC:3.6.1.-] D CI104_06465 HMP-PP phosphatase K11938 cof; HMP-PP phosphatase [EC:3.6.1.-] D CI104_17390 nucleoside triphosphatase NudI K12944 nudI; nucleoside triphosphatase [EC:3.6.1.-] D CI104_18340 GDP-mannose pyrophosphatase NudK K12945 nudK; GDP-mannose pyrophosphatase NudK [EC:3.6.1.-] D CI104_10505 septum formation inhibitor Maf K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D CI104_25115 ATPase RavA K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D CI104_19380 alpha/beta hydrolase K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D CI104_19180 hypothetical protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D CI104_26915 hypothetical protein K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D CI104_07960 class II aldolase K22130 otnC; 3-dehydro-4-phosphotetronate decarboxylase [EC:4.1.1.104] D CI104_24480 aldolase K01671 yihT; sulfofructosephosphate aldolase [EC:4.1.2.57] D CI104_08555 fsa; fructose-6-phosphate aldolase K08313 fsaA; fructose-6-phosphate aldolase 1 [EC:4.1.2.-] D CI104_24020 fsa; fructose-6-phosphate aldolase K08314 fsaB; fructose-6-phosphate aldolase 2 [EC:4.1.2.-] D CI104_21515 altronate dehydratase K26399 K26399; arabinonate dehydratase [EC:4.2.1.5] D CI104_22560 bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D CI104_04635 crotonobetainyl-CoA hydratase K08299 caiD; crotonobetainyl-CoA hydratase [EC:4.2.1.149] D CI104_20910 dpaL; diaminopropionate ammonia-lyase K01751 E4.3.1.15; diaminopropionate ammonia-lyase [EC:4.3.1.15] D CI104_14975 serine/threonine dehydratase K22589 thadh; threo-3-hydroxy-L-aspartate ammonia-lyase [EC:4.3.1.16] D CI104_20260 cysteine desulfurase CsdA K01766 csdA; cysteine sulfinate desulfinase [EC:4.4.1.-] D CI104_20170 L-fucose mutarotase K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D CI104_20770 RbsD/FucU transporter K02431 fucU; L-fucose mutarotase [EC:5.1.3.29] D CI104_24310 rhaM; L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D CI104_09895 L-rhamnose mutarotase K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32] D CI104_01835 fructoselysine 3-epimerase K10709 frlC; fructoselysine 3-epimerase [EC:5.1.3.41] D CI104_13520 epimerase K14587 sgcE; protein sgcE [EC:5.1.3.-] D CI104_19745 arabinose-5-phosphate isomerase GutQ K02467 gutQ; arabinose 5-phosphate isomerase [EC:5.3.1.13] D CI104_24485 sugar isomerase K18479 yihS; sulfoquinovose isomerase [EC:5.3.1.31] D CI104_07950 hydroxypyruvate isomerase K22131 otnI; 2-dehydrotetronate isomerase [EC:5.3.1.35] D CI104_04640 ATP-dependent acyl-CoA ligase K02182 caiC; carnitine-CoA ligase [EC:6.2.1.48] D CI104_12505 electron transport complex subunit D K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D CI104_12510 electron transport complex subunit RsxC K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D CI104_12515 electron transport complex subunit RsxB K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D CI104_10090 nqrC; NADH:ubiquinone reductase (Na(+)-transporting) subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D CI104_01375 zntA; zinc/cadmium/mercury/lead-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D CI104_26635 copper-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D CI104_22115 mgtA; magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D CI104_05180 DNA/RNA nuclease SfsA K06206 sfsA; sugar fermentation stimulation protein A D CI104_16210 diol dehydratase reactivase subunit alpha K27264 pduG; propanediol dehydratase-reactivating factor large subunit D CI104_16215 propanediol dehydratase K27265 pduH; propanediol dehydratase-reactivating factor small subunit C 99982 Energy metabolism D CI104_24380 sulfurtransferase FdhD K02379 fdhD; FdhD protein D CI104_04360 acyl-CoA synthetase FdrA K02381 fdrA; FdrA protein D CI104_18595 fdx; ISC system 2Fe-2S type ferredoxin K04755 fdx; ferredoxin, 2Fe-2S D CI104_17320 2Fe-2S ferredoxin K11107 yfaE; ferredoxin D CI104_12500 electron transport complex subunit G K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D CI104_12495 electron transport complex subunit RsxE K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D CI104_12520 electron transport complex subunit A K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D CI104_19770 formate dehydrogenase K05796 hydN; electron transport protein HydN D CI104_25135 FMN-binding protein MioC K06205 mioC; MioC protein D CI104_21020 flavodoxin FldB K03840 fldB; flavodoxin II D CI104_18615 iron-sulfur cluster scaffold-like protein K04488 iscU; nitrogen fixation protein NifU and related proteins D CI104_07730 tcuB; tricarballylate utilization protein TcuB K13795 citB; citrate/tricarballylate utilization protein D CI104_07735 cobZ; tricarballylate dehydrogenase K13796 cobZ; tricarballylate dehydrogenase D CI104_22210 cytochrome b562 K15536 cybC; soluble cytochrome b562 D CI104_19830 formate hydrogenlyase K15827 hycB; formate hydrogenlyase subunit 2 D CI104_19825 formate hydrogenlyase subunit 3 K15828 hycC; formate hydrogenlyase subunit 3 D CI104_19820 hycD; hydrogenase 3 membrane subunit K15829 hycD; formate hydrogenlyase subunit 4 D CI104_19815 hycE; hydrogenase large subunit K15830 hycE; formate hydrogenlyase subunit 5 D CI104_19810 formate hydrogenlyase complex iron-sulfur subunit K15831 hycF; formate hydrogenlyase subunit 6 D CI104_19805 NADH-quinone oxidoreductase subunit NuoB K15832 hycG; formate hydrogenlyase subunit 7 D CI104_19755 anaerobic nitric oxide reductase flavorubredoxin K12264 norV; anaerobic nitric oxide reductase flavorubredoxin D CI104_17175 nitrate reductase K02570 napD; periplasmic nitrate reductase NapD D CI104_17180 napF; ferredoxin-type protein NapF K02572 napF; ferredoxin-type protein NapF D CI104_23170 heme lyase NrfEFG subunit NrfE K04016 nrfE; cytochrome c-type biogenesis protein NrfE D CI104_23165 heme lyase NrfEFG subunit NrfF K04017 nrfF; formate-dependent nitrite reductase complex subunit NrfF D CI104_23160 heme lysase NrfEFG subunit NrfG K04018 nrfG; formate-dependent nitrite reductase complex subunit NrfG D CI104_07750 flavodoxin FldA K03839 fldA; flavodoxin I D CI104_17150 cytochrome c-type protein NapC K02569 napC; cytochrome c-type protein NapC D CI104_17165 ferredoxin-type protein NapG K02573 napG; ferredoxin-type protein NapG D CI104_17160 quinol dehydrogenase ferredoxin subunit NapH K02574 napH; ferredoxin-type protein NapH D CI104_04660 electron transfer flavoprotein K03521 fixA; electron transfer flavoprotein beta subunit D CI104_12025 ferredoxin family protein K03855 fixX; ferredoxin like protein D CI104_04675 ferredoxin-like protein FixX K03855 fixX; ferredoxin like protein D CI104_23185 cytochrome c nitrite reductase pentaheme subunit K04013 nrfB; cytochrome c-type protein NrfB D CI104_23180 nrfC; cytochrome c nitrite reductase Fe-S protein K04014 nrfC; protein NrfC D CI104_12250 thiosulfate reductase electron transport protein PhsB K04014 nrfC; protein NrfC D CI104_23175 nrfD; cytochrome c nitrite reductase subunit NrfD K04015 nrfD; protein NrfD C 99983 Lipid metabolism D CI104_22490 DNA alkylation response protein K09456 aidB; putative acyl-CoA dehydrogenase C 99984 Nucleotide metabolism D CI104_19570 class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI K03647 nrdI; protein involved in ribonucleotide reduction C 99985 Amino acid metabolism D CI104_18115 sulfate transporter CysZ K06203 cysZ; CysZ protein D CI104_18255 ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter D CI104_18265 ethanolamine utilization protein EutJ K04024 eutJ; ethanolamine utilization protein EutJ D CI104_18230 ethanolamine utilization microcompartment protein EutK K04025 eutK; ethanolamine utilization protein EutK D CI104_18235 ethanolamine utilization microcompartment protein EutL K04026 eutL; ethanolamine utilization protein EutL D CI104_18275 ethanolamine utilization microcompartment protein EutN K04028 eutN; ethanolamine utilization protein EutN D CI104_16275 eutP; ethanolamine utilization protein EutP K04029 eutP; ethanolamine utilization protein EutP D CI104_18300 ethanolamine utilization acetate kinase EutP K04029 eutP; ethanolamine utilization protein EutP D CI104_18295 ethanolamine utilization acetate kinase EutQ K04030 eutQ; ethanolamine utilization protein EutQ D CI104_16270 propanediol utilization protein PduU K04031 eutS; ethanolamine utilization protein EutS D CI104_18305 ethanolamine utilization protein EutS K04031 eutS; ethanolamine utilization protein EutS D CI104_05385 VOC family protein K08234 yaeR; glyoxylase I family protein D CI104_13860 murein peptide amidase A K14054 mpaA; murein peptide amidase A D CI104_04195 YggS family pyridoxal phosphate-dependent enzyme K06997 yggS; PLP dependent protein D CI104_03180 serine dehydratase subunit alpha family protein K26607 cyuA; putative L-cysteine desulfidase C 99986 Glycan metabolism D CI104_16530 wcaD; putative colanic acid polymerase WcaD K13620 wcaD; putative colanic acid polymerase D CI104_16465 wcaM; colanic acid biosynthesis protein WcaM K16711 wcaM; colanic acid biosynthesis protein WcaM D CI104_14075 DUF1049 domain-containing protein K08992 lapA; lipopolysaccharide assembly protein A D CI104_14070 lipopolysaccharide assembly protein LapB K19804 lapB; lipopolysaccharide assembly protein B D CI104_08335 lysylphosphatidylglycerol synthetase family protein K07027 K07027; glycosyltransferase 2 family protein D CI104_01055 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB K20541 bcsB; cellulose synthase operon protein B C 99987 Cofactor metabolism D CI104_04305 nucleoside/nucleotide kinase family protein K02173 yggC; putative kinase D CI104_24840 protoheme IX biogenesis protein HemY K02498 hemY; HemY protein D CI104_24695 ubiB; ubiquinone biosynthesis regulatory protein kinase UbiB K03688 ubiB; ubiquinone biosynthesis protein D CI104_24700 SCP2 domain-containing protein K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D CI104_03790 hypothetical protein K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D CI104_02950 SCP2 domain-containing protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D CI104_24600 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein D CI104_16260 electron transport complex protein RnfC K27271 pduS; cobalamin reductase C 99988 Secondary metabolism D CI104_03920 cell division protein FtsP K04753 sufI; suppressor of ftsI D CI104_25240 NAD(P)H-dependent oxidoreductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D CI104_18710 DoxX family protein K15977 K15977; putative oxidoreductase D CI104_03210 DoxX family protein K15977 K15977; putative oxidoreductase D CI104_08800 DoxX family protein K15977 K15977; putative oxidoreductase D CI104_18375 esterase K06999 K06999; phospholipase/carboxylesterase D CI104_18900 protein acetyltransferase K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D CI104_19735 transcriptional regulator GutM K02466 gutM; glucitol operon activator protein D CI104_02525 hypothetical protein K03623 yhcO; ribonuclease inhibitor D CI104_07475 cold-shock protein K03704 cspA; cold shock protein D CI104_15165 cold-shock protein CspC K03704 cspA; cold shock protein D CI104_00875 cold-shock protein K03704 cspA; cold shock protein D CI104_11510 cold-shock protein K03704 cspA; cold shock protein D CI104_08845 cspD; cold shock domain protein CspD K03704 cspA; cold shock protein D CI104_23710 Rsd/AlgQ family anti-sigma factor K07740 rsd; regulator of sigma D D CI104_04460 thr operon leader peptide K08278 thrL; thr operon leader peptide D CI104_19835 transcriptional regulator K15833 hycA; formate hydrogenlyase regulatory protein HycA D CI104_19800 formate hydrogenlyase maturation protein HycH K15834 hycH; formate hydrogenlyase maturation protein HycH D CI104_06490 transcriptional regulator K04752 glnK; nitrogen regulatory protein P-II 2 D CI104_01710 RNA-binding transcriptional accessory protein K06959 tex; protein Tex C 99974 Translation D CI104_01205 ABC transporter ATP-binding protein/permease K13926 rbbA; ribosome-dependent ATPase C 99975 Protein processing D CI104_13710 heat-inducible protein K03668 hslJ; heat shock protein HslJ D CI104_08850 ATP-dependent Clp protease adaptor ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D CI104_06415 trigger factor K03545 tig; trigger factor D CI104_02435 protein-methionine-sulfoxide reductase heme-binding subunit MsrQ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D CI104_24420 fdhE; formate dehydrogenase accessory protein FdhE K02380 fdhE; FdhE protein D CI104_03695 urease accessory protein UreE K03187 ureE; urease accessory protein D CI104_03690 urease accessory protein UreF K03188 ureF; urease accessory protein D CI104_03685 ureG; urease accessory protein UreG K03189 ureG; urease accessory protein D CI104_03715 urease accessory protein K03190 ureD; urease accessory protein D CI104_19085 SsrA-binding protein SmpB K03664 smpB; SsrA-binding protein D CI104_04055 hydrogenase 2 accessory protein HypG K04653 hypC; hydrogenase expression/formation protein HypC D CI104_19850 hydrogenase assembly chaperone K04653 hypC; hydrogenase expression/formation protein HypC D CI104_19855 hydrogenase formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD D CI104_19860 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D CI104_19765 hypF; carbamoyltransferase HypF K04656 hypF; hydrogenase maturation protein HypF D CI104_19565 NrdH-redoxin K06191 nrdH; glutaredoxin-like protein NrdH D CI104_25025 ATP-dependent protease K07391 comM; magnesium chelatase family protein D CI104_01920 hypothetical protein K07397 yhfA; putative redox protein D CI104_01670 iron-sulfur cluster biogenesis protein NfuA K07400 nfuA; Fe/S biogenesis protein NfuA D CI104_20930 hypothetical protein K07402 xdhC; xanthine dehydrogenase accessory factor D CI104_13300 glutathione S-transferase family protein K11208 yncG; GST-like protein C 99976 Replication and repair D CI104_06510 6-O-methylguanine DNA methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein D CI104_20130 flap endonuclease Xni K01146 xni; protein Xni D CI104_21745 hypothetical protein K03630 radC; DNA repair protein RadC D CI104_00515 hypothetical protein K03630 radC; DNA repair protein RadC D CI104_19350 hypothetical protein K03630 radC; DNA repair protein RadC D CI104_24710 DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC D CI104_08825 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D CI104_19295 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D CI104_16025 ATP-dependent endonuclease K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D CI104_02995 YraN family protein K07460 yraN; putative endonuclease D CI104_02960 GIY-YIG nuclease family protein K07461 K07461; putative endonuclease D CI104_02220 DNA-protecting protein DprA K04096 smf; DNA processing protein D CI104_20615 integrase K07357 fimB; type 1 fimbriae regulatory protein FimB D CI104_20620 tyrosine recombinase K07358 fimE; type 1 fimbriae regulatory protein FimE D CI104_16300 DNA gyrase inhibitor SbmC K07470 sbmC; DNA gyrase inhibitor D CI104_08930 replication-associated recombination protein A K07478 ycaJ; putative ATPase D CI104_02230 hypothetical protein K07479 yrdD; putative DNA topoisomerase D CI104_27275 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family D CI104_27525 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family D CI104_28015 IS5/IS1182 family transposase K07481 K07481; transposase, IS5 family D CI104_26750 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_26810 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_26880 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_26920 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_26940 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_26710 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_27335 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_27400 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_27420 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_27445 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_19100 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_19175 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_19215 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_27550 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_27605 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_28610 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_25575 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_25600 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_25770 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_25795 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_26325 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_26490 IS6 family transposase IS15DIV K18320 IS15; transposase, IS6 family D CI104_25655 IS6 family transposase K18320 IS15; transposase, IS6 family D CI104_26720 IS6 family transposase K18320 IS15; transposase, IS6 family D CI104_27570 IS66 family insertion sequence hypothetical protein K07483 K07483; transposase D CI104_27585 hypothetical protein K07483 K07483; transposase D CI104_27600 hypothetical protein K07483 K07483; transposase D CI104_27995 IS66 family insertion sequence hypothetical protein K07483 K07483; transposase D CI104_28005 transposase K07483 K07483; transposase D CI104_27565 IS66 family insertion sequence hypothetical protein K07484 K07484; transposase D CI104_27985 IS66 family transposase K07484 K07484; transposase D CI104_27990 IS66 family insertion sequence hypothetical protein K07484 K07484; transposase D CI104_27190 IS110 family transposase K07486 K07486; transposase D CI104_27980 IS110 family transposase K07486 K07486; transposase D CI104_07210 IS3 family transposase K07497 K07497; putative transposase D CI104_28445 IS3 family transposase K07497 K07497; putative transposase D CI104_28635 integrase K07497 K07497; putative transposase D CI104_25870 IS3 family transposase K07497 K07497; putative transposase D CI104_14950 transposase K07497 K07497; putative transposase C 99979 Viral proteins C 99998 Others D CI104_13990 phage shock protein PspA K03969 pspA; phage shock protein A D CI104_13975 phage shock protein D K03971 pspD; phage shock protein D D CI104_06625 nucleoid-associated protein, YbaB/EbfC family K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CI104_17855 hypothetical protein K21990 yfdC; formate-nitrite transporter family protein D CI104_24505 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D CI104_24510 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D CI104_24075 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D CI104_24195 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D CI104_00400 glycoside-pentoside-hexuronide family transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D CI104_21665 MFS transporter K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family D CI104_24865 amino acid permease K03293 TC.AAT; amino acid transporter, AAT family D CI104_01640 citrate transporter K03300 TC.CITMHS; citrate-Mg2+:H+ or citrate-Ca2+:H+ symporter, CitMHS family D CI104_05855 MFS transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CI104_12485 dipeptide/tripeptide permease DtpA K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CI104_01175 dipeptide/tripeptide permease K03305 TC.POT; proton-dependent oligopeptide transporter, POT family D CI104_04485 sodium:alanine symporter family protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CI104_06140 brnQ; branched-chain amino acid transporter carrier protein BrnQ K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CI104_23500 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D CI104_07940 bile acid:sodium symporter K03453 TC.BASS; bile acid:Na+ symporter, BASS family D CI104_19370 anion permease K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D CI104_08405 2-oxoglutarate translocator K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D CI104_24170 C4-dicarboxylate ABC transporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family D CI104_00085 transporter K07085 K07085; putative transport protein D CI104_08670 transporter K07085 K07085; putative transport protein D CI104_16695 heavy metal resistance protein K23243 rcnB; nickel/cobalt homeostasis protein C 99978 Cell growth D CI104_14215 septation protein A K06190 ispZ; intracellular septation protein D CI104_01360 hypothetical protein K27311 dcrB; inner membrane lipoprotein DcrB D CI104_22385 iron-sulfur cluster repair protein YtfE K07322 ytfE; regulator of cell morphogenesis and NO signaling D CI104_11870 cell division activator CedA K15722 cedA; cell division activator D CI104_14635 SpoVR family protein K06415 spoVR; stage V sporulation protein R D CI104_12535 division septum protein Blr K22718 blr; divisome-associated membrane protein D CI104_00635 murein hydrolase activator EnvC K22719 envC; murein hydrolase activator C 99993 Cell motility D CI104_10595 penicillin-binding protein activator LpoB K07337 K07337; penicillin-binding protein activator D CI104_09260 Crp/Fnr family transcriptional regulator K07343 tfoX; DNA transformation protein and related proteins D CI104_20105 SecY-interacting protein K15723 syd; SecY interacting protein Syd D CI104_03785 cell surface composition regulator GlgS K22720 glgS; surface composition regulator C 99995 Signaling proteins D CI104_04995 regulatory signaling modulator protein AmpE K03807 ampE; AmpE protein D CI104_15215 RNA chaperone ProQ K03607 proQ; ProP effector D CI104_28530 hypothetical protein K03607 proQ; ProP effector D CI104_01180 universal stress protein A K06149 uspA; universal stress protein A D CI104_15565 universal stress protein UspC K14064 uspC; universal stress protein C D CI104_13830 universal stress protein UspE K14055 uspE; universal stress protein E D CI104_13740 universal stress protein UspF K14061 uspF; universal stress protein F D CI104_14695 universal stress protein UspF K14061 uspF; universal stress protein F D CI104_07390 universal stress protein UspG K11932 uspG; universal stress protein G D CI104_23305 universal stress protein UspG K11932 uspG; universal stress protein G D CI104_07355 carbon starvation protein A K06200 cstA; carbon starvation protein D CI104_24520 translational GTPase TypA K06207 typA; GTP-binding protein D CI104_10205 phosphate starvation protein PhoH K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CI104_07620 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D CI104_11605 serine protein kinase PrkA K07180 prkA; serine protein kinase D CI104_03760 hypothetical protein K07184 ygiM; SH3 domain protein D CI104_21155 hypothetical protein K07186 smp; membrane protein D CI104_12870 multiple antibiotic resistance protein MarB K13630 marB; multiple antibiotic resistance protein MarB D CI104_06350 YajQ family cyclic di-GMP-binding protein K09767 yajQ; cyclic-di-GMP-binding protein D CI104_11435 diguanylate phosphodiesterase K21973 bluF; blue light- and temperature-responsive anti-repressor D CI104_11440 two-component-system connector protein YcgZ K21974 ycgZ; probable RcsB/C two-component-system connector D CI104_11445 hypothetical protein K21975 ymgA; probable RcsB/C two-component-system connector D CI104_11450 two-component-system connector protein AriR K21976 ariR; probable RcsB/C two-component-system connector, global regulator of biofilm formation and acid-resistance C 99992 Structural proteins D CI104_08925 lolA; outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D CI104_14445 lolB; outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D CI104_17850 phospholipid-binding lipoprotein MlaA K04754 mlaA; phospholipid-binding lipoprotein MlaA D CI104_24920 ECA polysaccharide chain length modulation protein K05790 wzzE; lipopolysaccharide biosynthesis protein WzzE D CI104_12450 glycine zipper 2TM domain-containing protein K06077 slyB; outer membrane lipoprotein SlyB D CI104_05340 molecular chaperone Skp K06142 hlpA; outer membrane protein D CI104_19925 nlpD; murein hydrolase activator NlpD K06194 nlpD; lipoprotein NlpD D CI104_20880 hypothetical protein K12943 ygeR; lipoprotein YgeR D CI104_02920 lipoprotein NlpI K05803 nlpI; lipoprotein NlpI D CI104_14200 outer membrane protein OmpW K07275 ompW; outer membrane protein D CI104_11915 DUF481 domain-containing protein K07283 ydiY; putative salt-induced outer membrane protein D CI104_15070 hypothetical protein K07285 slp; outer membrane lipoprotein D CI104_06400 hypothetical protein K07286 yajG; uncharacterized lipoprotein D CI104_16575 outer membrane assembly protein AsmA K07289 asmA; AsmA protein D CI104_01100 AsmA family protein K07290 yhjG; AsmA family protein D CI104_06910 NfeD family protein K07340 ybbJ; inner membrane protein D CI104_01200 hypothetical protein K01993 ABC-2.TX; HlyD family secretion protein D CI104_12630 tqsA; pheromone autoinducer 2 transporter K11744 tqsA; AI-2 transport protein TqsA D CI104_14055 osmotically-inducible lipoprotein B K04062 osmB; osmotically inducible lipoprotein OsmB D CI104_11825 transcriptional regulator K04064 osmE; osmotically inducible lipoprotein OsmE D CI104_04440 cell envelope integrity protein CreD K06143 creD; inner membrane protein D CI104_17125 cytochrome c maturation protein CcmE K02197 ccmE; cytochrome c-type biogenesis protein CcmE D CI104_17110 cytochrome c biogenesis protein CcmH K02200 ccmH; cytochrome c-type biogenesis protein CcmH D CI104_18550 cytoskeleton protein RodZ K15539 rodZ; cytoskeleton protein RodZ D CI104_26735 MFS transporter K19061 mrx; macrolide resistance protein D CI104_02505 protein AaeX K21695 aaeX; protein AaeX D CI104_16190 propanediol utilization microcompartment protein PduB K27263 pduB; bacterial microcompartment shell protein D CI104_16220 BMC domain-containing protein K27266 pduJ; bacterial microcompartment shell protein D CI104_16225 BMC domain-containing protein K27267 pduK; bacterial microcompartment shell protein D CI104_16235 microcompartment protein PduM K27268 pduM; bacterial microcompartment assembly protein D CI104_16240 ethanolamine utilization protein EutN K27269 pduN; bacterial microcompartment shell vertex protein D CI104_16265 BMC domain-containing protein K27272 pduT; bacterial microcompartment shell protein C 99994 Others D CI104_25225 phoU; phosphate transport system regulatory protein PhoU K02039 phoU; phosphate transport system protein D CI104_15605 ferritin K02255 ftnB; ferritin-like protein 2 D CI104_02025 bacterioferritin-associated ferredoxin K02192 bfd; bacterioferritin-associated ferredoxin D CI104_10295 mdoG; glucan biosynthesis protein G K03670 mdoG; periplasmic glucans biosynthesis protein D CI104_22715 divalent cation tolerance protein CutA K03926 cutA; periplasmic divalent cation tolerance protein D CI104_15415 copper homeostasis protein CutC K06201 cutC; copper homeostasis protein D CI104_23105 phnK; phosphonate C-P lyase system protein PhnK K05781 phnK; putative phosphonate transport system ATP-binding protein D CI104_04715 Co2+/Mg2+ efflux protein ApaG K06195 apaG; ApaG protein D CI104_24815 iron donor protein CyaY K06202 cyaY; iron-sulfur cluster assembly protein CyaY D CI104_14390 hypothetical protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur B B 09194 Poorly characterized C 99996 General function prediction only D CI104_17710 colicin V production protein K03558 cvpA; membrane protein required for colicin V production D CI104_09460 endolysin K03791 K03791; putative chitinase D CI104_00810 hypothetical protein K03796 bax; Bax protein D CI104_09220 paraquat-inducible protein B K06192 pqiB; paraquat-inducible protein B D CI104_10395 gfo/Idh/MocA family oxidoreductase K03810 mviM; virulence factor D CI104_17475 GNAT family N-acetyltransferase K02348 elaA; ElaA protein D CI104_18910 hypothetical protein K05811 yfiM; putative lipoprotein D CI104_14405 chaB; cation transport regulator K06197 chaB; cation transport regulator D CI104_21210 molecular chaperone OsmY K04065 osmY; hyperosmotically inducible periplasmic protein D CI104_10220 phosphatase K04477 ycdX; putative hydrolase D CI104_18870 autonomous glycyl radical cofactor GrcA K06866 grcA; autonomous glycyl radical cofactor D CI104_14320 patatin family protein K07001 K07001; NTE family protein D CI104_16410 HAD family hydrolase K07025 K07025; putative hydrolase of the HAD superfamily D CI104_05230 iron-sulfur cluster insertion protein ErpA K15724 erpA; iron-sulfur cluster insertion protein D CI104_12130 Fe-S cluster assembly scaffold SufA K05997 sufA; Fe-S cluster assembly protein SufA D CI104_12135 Fe-S cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB D CI104_12145 Fe-S cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD D CI104_11880 metal-dependent hydrolase K07038 K07038; inner membrane protein D CI104_06995 metal-dependent hydrolase K07038 K07038; inner membrane protein D CI104_24450 YihY/virulence factor BrkB family protein K07058 K07058; membrane protein D CI104_01115 yhjD; inner membrane protein YhjD K07058 K07058; membrane protein D CI104_22700 membrane protein FxsA K07113 fxsA; UPF0716 protein FxsA D CI104_20265 csdE; cysteine desulfurase sulfur acceptor subunit CsdE K02426 sufE; cysteine desulfuration protein SufE D CI104_12155 cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE D CI104_10330 rhodanese domain-containing protein K07146 K07146; UPF0176 protein D CI104_10990 lysogenization protein HflD K07153 hflD; high frequency lysogenization protein D CI104_04630 carnitine operon protein CaiE K08279 caiE; carnitine operon protein CaiE D CI104_23060 VOC family protein K04750 phnB; PhnB protein D CI104_07935 heme-binding protein K11477 glcG; glc operon protein GlcG D CI104_26185 arsH; arsenical resistance protein ArsH K11811 arsH; arsenical resistance protein ArsH D CI104_10310 secY/secA suppressor protein K12147 msyB; acidic protein MsyB D CI104_21265 hydroxamate siderophore iron reductase FhuF K13255 fhuF; ferric iron reductase protein FhuF D CI104_20075 glucarate dehydratase K13918 gudX; glucarate dehydratase-related protein D CI104_01435 LemA family protein K03744 lemA; LemA protein D CI104_01970 lysis protein K03745 slyX; SlyX protein D CI104_02225 DUF494 domain-containing protein K03747 smg; Smg protein D CI104_04425 hypothetical protein K05805 creA; CreA protein D CI104_04230 SprT family protein K02742 sprT; SprT protein D CI104_17715 cell division protein DedD K03749 dedD; DedD protein D CI104_01800 cell division protein DamX K03112 damX; DamX protein D CI104_16850 vancomycin high temperature exclusion protein K03748 sanA; SanA protein D CI104_17730 hypothetical protein K03975 dedA; membrane-associated protein D CI104_09215 paraquat-inducible membrane protein A K03808 pqiA; paraquat-inducible protein A D CI104_15225 paraquat-inducible protein A K03808 pqiA; paraquat-inducible protein A D CI104_17470 protein ElaB K05594 elaB; ElaB protein D CI104_00105 DUF202 domain-containing protein K00389 yidH; putative membrane protein D CI104_22970 hypothetical protein K08984 yjdF; putative membrane protein D CI104_13880 TIGR01620 family protein K08990 ycjF; putative membrane protein D CI104_01390 hypothetical protein K08993 yhhL; putative membrane protein D CI104_14325 hypothetical protein K09858 K09858; SEC-C motif domain protein D CI104_06505 hypothetical protein K09914 K09914; putative lipoprotein D CI104_23410 maltose operon protein MalM K05775 malM; maltose operon periplasmic protein D CI104_23440 phosphate-starvation-inducible protein PsiE K13256 psiE; protein PsiE D CI104_06100 AroM protein K14591 aroM; protein AroM D CI104_23055 hypothetical protein K06193 phnA; protein PhnA D CI104_00360 DUF1471 domain-containing protein K21740 rclB; reactive chlorine resistance protein B C 99997 Function unknown D CI104_20555 ankyrin repeat domain-containing protein K06867 K06867; uncharacterized protein D CI104_00115 hypothetical protein K06871 K06871; uncharacterized protein D CI104_10160 stress-induced protein K06884 K06884; uncharacterized protein D CI104_11480 stress-induced acidophilic repeat motif-containing protein K06884 K06884; uncharacterized protein D CI104_22205 alpha/beta hydrolase K06889 K06889; uncharacterized protein D CI104_22475 esterase K06889 K06889; uncharacterized protein D CI104_21480 hypothetical protein K06889 K06889; uncharacterized protein D CI104_08330 BAX inhibitor (BI)-1/YccA family protein K06890 K06890; uncharacterized protein D CI104_03570 baseplate assembly protein K06903 W; Bacteriophage baseplate protein W D CI104_10845 baseplate protein K06903 W; Bacteriophage baseplate protein W D CI104_03630 late control protein D K06905 D; Bacteriophage probable baseplate hub protein D CI104_10835 phage protein D K06905 D; Bacteriophage probable baseplate hub protein D CI104_03625 phage tail protein K06906 gpU; phage tail protein D CI104_03600 phage tail protein K06907 FI; Bacteriophage tail sheath protein D CI104_10795 phage tail protein K06907 FI; Bacteriophage tail sheath protein D CI104_03605 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein D CI104_10800 phage major tail tube protein K06908 FII; Bacteriophage tail tube protein D CI104_13885 hypothetical protein K06918 K06918; uncharacterized protein D CI104_09290 CoA-binding protein K06929 K06929; uncharacterized protein D CI104_04330 DNA-binding protein K06934 K06934; uncharacterized protein D CI104_12415 DUF1289 domain-containing protein K06938 K06938; uncharacterized protein D CI104_16975 zinc/iron-chelating domain-containing protein K06940 K06940; uncharacterized protein D CI104_21775 hypothetical protein K06946 K06946; uncharacterized protein D CI104_19320 hypothetical protein K06946 K06946; uncharacterized protein D CI104_15960 phosphohydrolase K06950 K06950; uncharacterized protein D CI104_11875 L-cystine transporter K06956 K06956; uncharacterized protein D CI104_13510 SgcQ protein K06971 K06971; uncharacterized protein D CI104_20575 N-acetyltransferase K06975 K06975; uncharacterized protein D CI104_06245 VOC family protein K06996 K06996; uncharacterized protein D CI104_10610 hypothetical protein K07000 K07000; uncharacterized protein D CI104_03850 esterase YqiA K07000 K07000; uncharacterized protein D CI104_17080 DUF3413 domain-containing protein K07014 K07014; uncharacterized protein D CI104_01935 hydrolase K07019 K07019; uncharacterized protein D CI104_04505 hypothetical protein K07034 K07034; uncharacterized protein D CI104_15650 YecA family protein K07039 K07039; uncharacterized protein D CI104_18385 neutral zinc metallopeptidase K07054 K07054; uncharacterized protein D CI104_01960 hypothetical protein K07070 K07070; uncharacterized protein D CI104_17660 TIGR01777 family protein K07071 K07071; uncharacterized protein D CI104_23475 nucleotidyltransferase domain-containing protein K07074 K07074; uncharacterized protein D CI104_02980 permease K07089 K07089; uncharacterized protein D CI104_24495 anion permease K07090 K07090; uncharacterized protein D CI104_10135 anion permease K07090 K07090; uncharacterized protein D CI104_17800 hypothetical protein K07090 K07090; uncharacterized protein D CI104_22430 hypothetical protein K07090 K07090; uncharacterized protein D CI104_17640 YfcE family phosphodiesterase K07095 K07095; uncharacterized protein D CI104_22350 YtfJ family protein K07109 K07109; uncharacterized protein D CI104_09985 YtfJ family protein K07109 K07109; uncharacterized protein D CI104_16320 YeeE/YedE family protein K07112 K07112; uncharacterized protein D CI104_15830 hypothetical protein K07112 K07112; uncharacterized protein D CI104_07870 AbrB family transcriptional regulator K07120 K07120; uncharacterized protein D CI104_03000 penicillin-binding protein activator K07121 K07121; uncharacterized protein D CI104_23145 sel1 repeat family protein K07126 K07126; uncharacterized protein D CI104_15400 hypothetical protein K07136 K07136; uncharacterized protein D CI104_02650 TIGR01212 family radical SAM protein K07139 K07139; uncharacterized protein D CI104_09200 hypothetical protein K07140 K07140; MOSC domain-containing protein D CI104_16885 DUF418 family protein K07148 K07148; uncharacterized protein D CI104_04115 DUF554 domain-containing protein K07150 K07150; uncharacterized protein D CI104_25275 membrane protein insertion efficiency factor YidD K08998 K08998; uncharacterized protein D CI104_04185 YggU family protein K09131 K09131; uncharacterized protein D CI104_07510 hypothetical protein K09158 K09158; uncharacterized protein D CI104_14655 YcgN family cysteine cluster protein K09160 K09160; uncharacterized protein D CI104_17580 YfbU family protein K09161 K09161; uncharacterized protein D CI104_06085 DUF188 domain-containing protein K09768 K09768; uncharacterized protein D CI104_14235 hypothetical protein K09780 K09780; uncharacterized protein D CI104_15940 hypothetical protein K09781 K09781; uncharacterized protein D CI104_11600 hypothetical protein K09786 K09786; uncharacterized protein D CI104_06610 DUF454 domain-containing protein K09790 K09790; uncharacterized protein D CI104_09075 hypothetical protein K09791 K09791; uncharacterized protein D CI104_13530 hypothetical protein K09794 K09794; uncharacterized protein D CI104_00630 hypothetical protein K09798 K09798; uncharacterized protein D CI104_19075 RnfH family protein K09801 K09801; uncharacterized protein D CI104_16290 hypothetical protein K09802 K09802; uncharacterized protein D CI104_21395 hypothetical protein K09803 K09803; uncharacterized protein D CI104_04390 oxidative stress defense protein K09807 K09807; uncharacterized protein D CI104_08830 DUF535 domain-containing protein K09824 virK; uncharacterized protein D CI104_09225 hypothetical protein K09857 K09857; uncharacterized protein D CI104_04480 peroxide stress protein YaaA K09861 K09861; uncharacterized protein D CI104_04950 DNA gyrase inhibitor YacG K09862 K09862; uncharacterized protein D CI104_23690 DUF416 domain-containing protein K09891 K09891; uncharacterized protein D CI104_24555 GTPase-activating protein K09894 K09894; uncharacterized protein D CI104_21095 YecA family protein K09895 K09895; uncharacterized protein D CI104_24590 hypothetical protein K09896 K09896; uncharacterized protein D CI104_25030 DUF413 family protein K09897 K09897; uncharacterized protein D CI104_01930 hypothetical protein K09898 K09898; uncharacterized protein D CI104_17585 DUF412 domain-containing protein K09899 K09899; uncharacterized protein D CI104_14250 dsDNA-mimic protein K09901 K09901; uncharacterized protein D CI104_14665 hypothetical protein K09902 K09902; uncharacterized protein D CI104_17075 hypothetical protein K09904 K09904; uncharacterized protein D CI104_15420 VOC family protein K09907 K09907; uncharacterized protein D CI104_02555 hypothetical protein K09908 K09908; uncharacterized protein D CI104_09285 hypothetical protein K09909 K09909; uncharacterized protein D CI104_05040 hypothetical protein K09910 K09910; uncharacterized protein D CI104_09245 macrodomain Ter protein K09911 K09911; uncharacterized protein D CI104_17970 DUF2058 domain-containing protein K09912 K09912; uncharacterized protein D CI104_10390 DUF480 domain-containing protein K09915 K09915; uncharacterized protein D CI104_11635 DUF1315 domain-containing protein K09916 K09916; uncharacterized protein D CI104_15090 YoaH family protein K09917 K09917; uncharacterized protein D CI104_15300 damage-inducible protein YebG K09918 K09918; uncharacterized protein D CI104_03840 hypothetical protein K09920 K09920; uncharacterized protein D CI104_24800 DUF484 domain-containing protein K09921 K09921; uncharacterized protein D CI104_04160 DUF469 domain-containing protein K09923 K09923; uncharacterized protein D CI104_09070 winged helix-turn-helix domain-containing protein K09927 K09927; uncharacterized protein D CI104_06165 antibiotic biosynthesis monooxygenase K09932 K09932; uncharacterized protein D CI104_22515 DUF2065 domain-containing protein K09937 K09937; uncharacterized protein D CI104_17890 DUF1508 domain-containing protein K09946 K09946; uncharacterized protein D CI104_18100 hypothetical protein K09954 K09954; uncharacterized protein D CI104_06690 hypothetical protein K09973 K09973; uncharacterized protein D CI104_11810 hypothetical protein K09975 K09975; uncharacterized protein D CI104_13655 DUF1318 domain-containing protein K09978 K09978; uncharacterized protein D CI104_02965 hypothetical protein K09979 K09979; uncharacterized protein D CI104_21835 hypothetical protein K09982 K09982; uncharacterized protein D CI104_09845 hypothetical protein K09982 K09982; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 30, 2024