+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Nakaseomyces glabratus
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E CAGL0K07051g uncharacterized protein K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E CAGL0H07535g uncharacterized protein K04563 CDC28; cyclin-dependent kinase [EC:2.7.11.22]
E CAGL0H10318g uncharacterized protein K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E CAGL0I09570g uncharacterized protein K00987 CEG1; mRNA guanylyltransferase [EC:2.7.7.50]
E CAGL0E06050g uncharacterized protein K01098 CET1; polynucleotide 5'-triphosphatase [EC:3.6.1.74]
E CAGL0D03630g uncharacterized protein K01098 CET1; polynucleotide 5'-triphosphatase [EC:3.6.1.74]
D Cap binding complex
E CAGL0K03729g uncharacterized protein K12882 NCBP1; nuclear cap-binding protein subunit 1
E CAGL0C01529g uncharacterized protein K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
D Pre-mRNA cleavage factor IIm (CFIIm)
E CAGL0K09086g uncharacterized protein K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E CAGL0K11374g uncharacterized protein K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E CAGL0H01463g uncharacterized protein K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E CAGL0D02332g uncharacterized protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E CAGL0F05005g uncharacterized protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E CAGL0G01694g uncharacterized protein K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E CAGL0M09064g uncharacterized protein K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E CAGL0I05456g uncharacterized protein K15541 MPE1; protein MPE1
E CAGL0M04081g uncharacterized protein K15542 PFS2; polyadenylation factor subunit 2
E CAGL0L09757g uncharacterized protein K14962 WDR82; COMPASS component SWD2
E CAGL0G08382g uncharacterized protein K15543 REF2; RNA end formation protein 2
E CAGL0K02079g uncharacterized protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CAGL0F03223g uncharacterized protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CAGL0H04851g uncharacterized protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CAGL0C01507g uncharacterized protein K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E CAGL0K05071g uncharacterized protein K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E CAGL0D06182g uncharacterized protein K14407 CSTF2; cleavage stimulation factor subunit 2
E CAGL0E03179g uncharacterized protein K14407 CSTF2; cleavage stimulation factor subunit 2
E CAGL0F06479g uncharacterized protein K14408 CSTF3; cleavage stimulation factor subunit 3
E CAGL0M12166g uncharacterized protein K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E CAGL0C02497g uncharacterized protein K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E CAGL0M04631g uncharacterized protein K11088 SNRPD3; small nuclear ribonucleoprotein D3
E CAGL0L04350g uncharacterized protein K11097 SNRPE; small nuclear ribonucleoprotein E
E CAGL0G09933g uncharacterized protein K11098 SNRPF; small nuclear ribonucleoprotein F
E CAGL0D02150g uncharacterized protein K11099 SNRPG; small nuclear ribonucleoprotein G
E CAGL0D02332g uncharacterized protein K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E CAGL0F05005g uncharacterized protein K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E CAGL0D06182g uncharacterized protein K14407 CSTF2; cleavage stimulation factor subunit 2
E CAGL0E03179g uncharacterized protein K14407 CSTF2; cleavage stimulation factor subunit 2
E CAGL0M12166g uncharacterized protein K06100 SYMPK; symplekin
D DRB sensitivity inducing factor (DSIF) complex
E CAGL0K04543g uncharacterized protein K15171 SUPT4H1; transcription elongation factor SPT4
E CAGL0H04697g uncharacterized protein K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E CAGL0A03300g uncharacterized protein K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E CAGL0B00462g uncharacterized protein K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
D Poly(A) addition factors
E CAGL0L02277g uncharacterized protein K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
D Negative regulators of mRNA 3' end processing
C Other processing factors
D CAGL0K05533g uncharacterized protein K13102 KIN; DNA/RNA-binding protein KIN17
D CAGL0F07095g uncharacterized protein K23039 NAB2; nuclear polyadenylated RNA-binding protein NAB2
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E CAGL0A03117g uncharacterized protein K12881 THOC4; THO complex subunit 4
E CAGL0L06908g uncharacterized protein K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E CAGL0M06567g uncharacterized protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
D TREX complex
E CAGL0J05654g uncharacterized protein K12879 THOC2; THO complex subunit 2
E CAGL0J07854g uncharacterized protein K12880 THOC3; THO complex subunit 3
E CAGL0A03117g uncharacterized protein K12881 THOC4; THO complex subunit 4
E CAGL0B01617g uncharacterized protein K18712 HPR1; THO complex subunit HPR1
E CAGL0I02310g uncharacterized protein K18713 THP2; THO complex subunit THP2
E CAGL0L11220g uncharacterized protein K18714 MFT1; THO complex subunit MFT1
D TREX-2 complex
E CAGL0I08063g uncharacterized protein K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E CAGL0A02728g uncharacterized protein K10881 SHFM1; 26 proteasome complex subunit DSS1
E CAGL0K07755g uncharacterized protein K11368 ENY2; enhancer of yellow 2 transcription factor
E CAGL0K08954g uncharacterized protein K16466 CETN3; centrin-3
E CAGL0E01111g uncharacterized protein K23719 SAC3; nuclear mRNA export protein SAC3
D Nuclear pore complex
E CAGL0G02497g uncharacterized protein K09291 TPR; nucleoprotein TPR
E CAGL0G03399g uncharacterized protein K14298 RAE1; mRNA export factor
E CAGL0J08778g uncharacterized protein K14004 SEC13; protein transport protein SEC13
E CAGL0I03454g uncharacterized protein K14004 SEC13; protein transport protein SEC13
E CAGL0I01584g uncharacterized protein K14304 NUP85; nuclear pore complex protein Nup85
E CAGL0L04862g uncharacterized protein K14308 NUP54; nuclear pore complex protein Nup54
E CAGL0J00781g uncharacterized protein K14306 NUP62; nuclear pore complex protein Nup62
E CAGL0L09130g uncharacterized protein K14309 NUP93; nuclear pore complex protein Nup93
E CAGL0F02277g uncharacterized protein K14309 NUP93; nuclear pore complex protein Nup93
E CAGL0L04928g uncharacterized protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E CAGL0F06171g uncharacterized protein K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E CAGL0H10494g uncharacterized protein K14301 NUP107; nuclear pore complex protein Nup107
E CAGL0G02211g uncharacterized protein K14300 NUP133; nuclear pore complex protein Nup133
E CAGL0J06534g uncharacterized protein K14311 NUP188; nuclear pore complex protein Nup188
E CAGL0G03355g uncharacterized protein K14312 NUP155; nuclear pore complex protein Nup155
E CAGL0I05412g uncharacterized protein K14303 NUP160; nuclear pore complex protein Nup160
E CAGL0J00759g uncharacterized protein K14310 NUP205; nuclear pore complex protein Nup205
E CAGL0L05852g uncharacterized protein K14307 NUPL1; nucleoporin p58/p45
E CAGL0G07359g uncharacterized protein K14315 NDC1; nucleoporin NDC1
E CAGL0J10340g uncharacterized protein K14299 SEH1; nucleoporin SEH1
E CAGL0C01265g uncharacterized protein K18715 NUP159; nucleoporin NUP159
E CAGL0F05599g uncharacterized protein K18716 NUP42; nucleoporin NUP42
E CAGL0L07062g uncharacterized protein K18717 ASM4; nucleoporin ASM4
E CAGL0M09691g uncharacterized protein K18717 ASM4; nucleoporin ASM4
E CAGL0G00660g uncharacterized protein K18718 NUP60; nucleoporin NUP60
E CAGL0J05214g uncharacterized protein K18719 NUP82; nucleoporin NUP82
E CAGL0H03069g uncharacterized protein K18720 NUP145; nucleoporin NUP145
E CAGL0L03784g uncharacterized protein K18721 NUP1; nucleoporin NUP1
E CAGL0G00902g uncharacterized protein K18722 NUP2; nucleoporin NUP2
E CAGL0K08954g uncharacterized protein K16466 CETN3; centrin-3
E CAGL0J09636g uncharacterized protein K18723 GLE1; nucleoporin GLE1
E CAGL0F03531g uncharacterized protein K14284 NXF; nuclear RNA export factor
E CAGL0D00440g uncharacterized protein K14543 MTR2; mRNA transport regulator MTR2
E CAGL0D03212g uncharacterized protein K18724 POM34; nucleoporin POM34
E CAGL0K03817g uncharacterized protein K18725 POM152; nucleoporin POM152
E CAGL0J02310g uncharacterized protein K14017 SNL1; HSP70 co-chaperone SNL1
D Ran-mediated transport factors
E CAGL0I00594g uncharacterized protein K07936 RAN; GTP-binding nuclear protein Ran
E CAGL0L07128g uncharacterized protein K18726 FAF2; FAS-associated factor 2
E CAGL0J09350g uncharacterized protein K13525 VCP; transitional endoplasmic reticulum ATPase
E CAGL0B02189g uncharacterized protein K14290 XPO1; exportin-1
E CAGL0I01782g uncharacterized protein K14290 XPO1; exportin-1
E CAGL0M04961g uncharacterized protein K14319 RANGAP1; Ran GTPase-activating protein 1
E CAGL0H04763g uncharacterized protein K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E CAGL0E01463g uncharacterized protein K03259 EIF4E; translation initiation factor 4E
E CAGL0I04356g uncharacterized protein K03257 EIF4A; translation initiation factor 4A
E CAGL0D06314g uncharacterized protein K03260 EIF4G; translation initiation factor 4G
E CAGL0E03289g uncharacterized protein K03260 EIF4G; translation initiation factor 4G
E CAGL0I08393g uncharacterized protein K03258 EIF4B; translation initiation factor 4B
E CAGL0H01573g uncharacterized protein K05749 CYFIP; cytoplasmic FMR1 interacting protein
E CAGL0L02915g uncharacterized protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E CAGL0J06908g uncharacterized protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E CAGL0H05929g uncharacterized protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E CAGL0M06149g uncharacterized protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E CAGL0L11792g uncharacterized protein K13126 PABPC; polyadenylate-binding protein
E CAGL0F08217g uncharacterized protein K13126 PABPC; polyadenylate-binding protein
E CAGL0C02563g uncharacterized protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E CAGL0G00506g uncharacterized protein K18664 SLH1; antiviral helicase SLH1 [EC:5.6.2.6]
E CAGL0J02266g uncharacterized protein K07575 MCTS; malignant T-cell-amplified sequence
E CAGL0B03927g uncharacterized protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
D Other transport factors
E CAGL0M03795g uncharacterized protein K14411 MSI; RNA-binding protein Musashi
E CAGL0E01947g uncharacterized protein K14411 MSI; RNA-binding protein Musashi
E CAGL0G02255g uncharacterized protein K14416 HBS1; elongation factor 1 alpha-like protein
E CAGL0B04675g uncharacterized protein K06965 PELO; protein pelota
E CAGL0H03949g uncharacterized protein K06965 PELO; protein pelota
E CAGL0J02200g uncharacterized protein K14396 PABPN1; polyadenylate-binding protein 2
E CAGL0H02497g uncharacterized protein K18731 GFD1; mRNA transport factor GFD1
E CAGL0L10021g uncharacterized protein K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E CAGL0F02915g uncharacterized protein K12867 SYF1; pre-mRNA-splicing factor SYF1
E CAGL0J02992g uncharacterized protein K18732 SARNP; SAP domain-containing ribonucleoprotein
E CAGL0J05346g uncharacterized protein K11493 RCC1; regulator of chromosome condensation
E CAGL0H08690g uncharacterized protein K23802 LENG8; SAC3 family protein LENG8/THP3
E CAGL0K00253g uncharacterized protein K23799 YRA2; RNA annealing protein YRA2
C Surveillance factors
D Surveillance complex
E CAGL0L06754g uncharacterized protein K03265 ETF1; peptide chain release factor subunit 1
E CAGL0E00781g uncharacterized protein K03267 ERF3; peptide chain release factor subunit 3
E CAGL0D04312g uncharacterized protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E CAGL0J10670g uncharacterized protein K14327 UPF2; regulator of nonsense transcripts 2
E CAGL0K01309g uncharacterized protein K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E CAGL0I03938g uncharacterized protein K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E CAGL0H06281g uncharacterized protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E CAGL0F00957g uncharacterized protein K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E CAGL0L06182g uncharacterized protein K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E CAGL0F01397g uncharacterized protein K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E CAGL0H05929g uncharacterized protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E CAGL0M06149g uncharacterized protein K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
C Factors involved in mRNA localization
D Cargo complex
E CAGL0K07612g uncharacterized protein K18736 SHE2; SWI5-dependent HO expression protein 2
E CAGL0K07942g uncharacterized protein K18737 SHE3; SWI5-dependent HO expression protein 3
E CAGL0C00583g uncharacterized protein K18737 SHE3; SWI5-dependent HO expression protein 3
E CAGL0I02926g pumilio-family RNA binding domain-containing protein K14844 PUF6; pumilio homology domain family member 6
E CAGL0F04257g uncharacterized protein K18738 HEK; heterogeneous nuclear rnp K-like protein
E CAGL0K07117g uncharacterized protein K18738 HEK; heterogeneous nuclear rnp K-like protein
E CAGL0L06226g uncharacterized protein K18738 HEK; heterogeneous nuclear rnp K-like protein
E CAGL0F00671g uncharacterized protein K10357 MYO5; myosin V
E CAGL0G06336g uncharacterized protein K10357 MYO5; myosin V
E CAGL0D00462g uncharacterized protein K18658 ASH1; transcriptional regulatory protein ASH1
D Factors that have mRNA localization signals
D Trans-acting binding proteins
E CAGL0D01188g uncharacterized protein K03231 EEF1A; elongation factor 1-alpha
E CAGL0K07832g uncharacterized protein K03231 EEF1A; elongation factor 1-alpha
E CAGL0L12760g elongation factor 1 gamma domain-containing protein K03233 EEF1G; elongation factor 1-gamma
E CAGL0L05148g elongation factor 1 gamma domain-containing protein K03233 EEF1G; elongation factor 1-gamma
D Other mRNA localization factors
E CAGL0H01573g uncharacterized protein K05749 CYFIP; cytoplasmic FMR1 interacting protein
E CAGL0H01287g uncharacterized protein K18748 SSD1; protein SSD1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E CAGL0L05874g uncharacterized protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E CAGL0E01463g uncharacterized protein K03259 EIF4E; translation initiation factor 4E
E CAGL0D04312g uncharacterized protein K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E CAGL0L02915g uncharacterized protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E CAGL0J06908g uncharacterized protein K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E CAGL0I03476g uncharacterized protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E CAGL0L04796g uncharacterized protein K18749 LSM14; protein LSM14
E CAGL0I04488g uncharacterized protein K18752 TNPO1; transportin-1
E CAGL0G09020g uncharacterized protein K04345 PKA; protein kinase A [EC:2.7.11.11]
E CAGL0M08404g uncharacterized protein K04345 PKA; protein kinase A [EC:2.7.11.11]
E CAGL0B00792g uncharacterized protein K18757 LARP1; la-related protein 1
E CAGL0F00627g uncharacterized protein K18757 LARP1; la-related protein 1
D P-body specific factors
E CAGL0L04004g uncharacterized protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E CAGL0B01331g uncharacterized protein K12612 DCP1; mRNA-decapping enzyme subunit 1
E CAGL0L05544g uncharacterized protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E CAGL0G05115g uncharacterized protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E CAGL0M00874g uncharacterized protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E CAGL0G03465g uncharacterized protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E CAGL0I06721g uncharacterized protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E CAGL0A03051g uncharacterized protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E CAGL0J05764g uncharacterized protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E CAGL0M07854g uncharacterized protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E CAGL0F00671g uncharacterized protein K10357 MYO5; myosin V
E CAGL0G06336g uncharacterized protein K10357 MYO5; myosin V
E CAGL0B02497g uncharacterized protein K07374 TUBA; tubulin alpha
E CAGL0E00451g uncharacterized protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E CAGL0I03388g uncharacterized protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E CAGL0L01001g uncharacterized protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E CAGL0D01342g uncharacterized protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E CAGL0J03102g uncharacterized protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E CAGL0H06149g uncharacterized protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E CAGL0C03399g uncharacterized protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CAGL0H03025g uncharacterized protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E CAGL0L09889g uncharacterized protein K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E CAGL0M07029g uncharacterized protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E CAGL0I06941g uncharacterized protein K18759 EDC1_2; enhancer of mRNA-decapping protein 1/2
E CAGL0M03333g uncharacterized protein K12615 EDC3; enhancer of mRNA-decapping protein 3
E CAGL0J10670g uncharacterized protein K14327 UPF2; regulator of nonsense transcripts 2
E CAGL0K01309g uncharacterized protein K14328 UPF3; regulator of nonsense transcripts 3
E CAGL0F02673g uncharacterized protein K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E CAGL0A02970g uncharacterized protein K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E CAGL0H10604g uncharacterized protein K13201 TIA1; nucleolysin TIA-1/TIAR
E CAGL0L11792g uncharacterized protein K13126 PABPC; polyadenylate-binding protein
E CAGL0F08217g uncharacterized protein K13126 PABPC; polyadenylate-binding protein
E CAGL0K04345g uncharacterized protein K15026 EIF2A; translation initiation factor 2A
E CAGL0K09966g uncharacterized protein K03253 EIF3B; translation initiation factor 3 subunit B
E CAGL0I04356g uncharacterized protein K03257 EIF4A; translation initiation factor 4A
E CAGL0M06567g uncharacterized protein K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E CAGL0I08393g uncharacterized protein K03258 EIF4B; translation initiation factor 4B
E CAGL0D06314g uncharacterized protein K03260 EIF4G; translation initiation factor 4G
E CAGL0E03289g uncharacterized protein K03260 EIF4G; translation initiation factor 4G
E CAGL0D02090g uncharacterized protein K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E CAGL0F03531g uncharacterized protein K14284 NXF; nuclear RNA export factor
E CAGL0J03454g uncharacterized protein K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E CAGL0B01331g uncharacterized protein K12612 DCP1; mRNA-decapping enzyme subunit 1
E CAGL0L04004g uncharacterized protein K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E CAGL0I03476g uncharacterized protein K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E CAGL0I06941g uncharacterized protein K18759 EDC1_2; enhancer of mRNA-decapping protein 1/2
E CAGL0M03333g uncharacterized protein K12615 EDC3; enhancer of mRNA-decapping protein 3
E CAGL0M07029g uncharacterized protein K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E CAGL0L05544g uncharacterized protein K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E CAGL0G05115g uncharacterized protein K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E CAGL0M00874g uncharacterized protein K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E CAGL0G03465g uncharacterized protein K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E CAGL0I06721g uncharacterized protein K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E CAGL0A03051g uncharacterized protein K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E CAGL0J05764g uncharacterized protein K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E CAGL0M07854g uncharacterized protein K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E CAGL0L05874g uncharacterized protein K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E CAGL0L10120g uncharacterized protein K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
D Other 5'-3' decay factors
E CAGL0C03113g uncharacterized protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
C 3'-5' decay
D Core exosome factors
E CAGL0J07458g uncharacterized protein K07573 CSL4; exosome complex component CSL4
E CAGL0H07205g uncharacterized protein K03679 RRP4; exosome complex component RRP4
E CAGL0B01463g exosome complex component RRP40 K03681 RRP40; exosome complex component RRP40
E CAGL0G09317g uncharacterized protein K11600 RRP41; exosome complex component RRP41
E CAGL0G03113g uncharacterized protein K12590 RRP46; exosome complex component RRP46
E CAGL0E03223g uncharacterized protein K12587 MTR3; exosome complex component MTR3
E CAGL0H10384g uncharacterized protein K12589 RRP42; exosome complex component RRP42
E CAGL0L08206g uncharacterized protein K12586 RRP43; exosome complex component RRP43
E CAGL0J00275g uncharacterized protein K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E CAGL0H04411g uncharacterized protein K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E CAGL0E02585g uncharacterized protein K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E CAGL0F03289g uncharacterized protein K12592 C1D; exosome complex protein LRP1
E CAGL0M10681g uncharacterized protein K12594 MPP6; M-phase phosphoprotein 6, fungi type
E CAGL0K05511g uncharacterized protein K12595 SKI7; superkiller protein 7
D TRAMP complex
E CAGL0E02101g uncharacterized protein K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E CAGL0J09460g uncharacterized protein K12597 AIR1_2; protein AIR1/2
E CAGL0J03388g uncharacterized protein K12597 AIR1_2; protein AIR1/2
E CAGL0J04928g uncharacterized protein K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
E CAGL0M03751g uncharacterized protein K12596 TRF5; poly(A) RNA polymerase
D Ski complex
E CAGL0C02563g uncharacterized protein K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E CAGL0G10087g uncharacterized protein K12600 SKI3; superkiller protein 3
E CAGL0I07073g uncharacterized protein K12601 SKI8; superkiller protein 8
D Ccr4-NOT complex
E CAGL0H06149g uncharacterized protein K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E CAGL0E00451g uncharacterized protein K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E CAGL0I03388g uncharacterized protein K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E CAGL0L01001g uncharacterized protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E CAGL0D01342g uncharacterized protein K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E CAGL0J03102g uncharacterized protein K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E CAGL0C03399g uncharacterized protein K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E CAGL0M03553g uncharacterized protein K12606 RCD1; CCR4-NOT transcription complex subunit 9
E CAGL0K12474g uncharacterized protein K12608 CAF16; CCR4-NOT complex subunit CAF16
E CAGL0J08349g uncharacterized protein K12609 CAF120; CCR4-NOT transcriptional complex subunit CAF120
D Pan complex
E CAGL0H03025g uncharacterized protein K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E CAGL0L09889g uncharacterized protein K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E CAGL0C03113g uncharacterized protein K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E CAGL0K09922g uncharacterized protein K27407 VTS1; RNA-binding protein VTS1
C Other degradation factors
D RNases
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E CAGL0M05159g uncharacterized protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
E CAGL0I09636g uncharacterized protein K03685 rnc; ribonuclease III [EC:3.1.26.3]
E CAGL0F01727g uncharacterized protein K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E CAGL0I02486g uncharacterized protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E CAGL0F08261g uncharacterized protein K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E CAGL0L10758g uncharacterized protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E CAGL0I05698g uncharacterized protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E CAGL0F08041g uncharacterized protein K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E CAGL0I03322g uncharacterized protein K04043 dnaK; molecular chaperone DnaK
E CAGL0I01496g uncharacterized protein K04043 dnaK; molecular chaperone DnaK
E CAGL0G04917g uncharacterized protein K04043 dnaK; molecular chaperone DnaK
E CAGL0K05973g uncharacterized protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E CAGL0I04598g uncharacterized protein K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E CAGL0H07205g uncharacterized protein K03679 RRP4; exosome complex component RRP4
E CAGL0J07458g uncharacterized protein K07573 CSL4; exosome complex component CSL4
D Cofactors
E CAGL0G09317g uncharacterized protein K11600 RRP41; exosome complex component RRP41
E CAGL0H10384g uncharacterized protein K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024