+E Ribosome biogenesis KO
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Ribosome Biogenesis - Campylobacter hominis
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D CHAB381_1613 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C CHAB381_1060 era; GTP-binding protein Era K03595 era; GTPase
C CHAB381_0676 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C CHAB381_0535 dksA; DnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor
C CHAB381_0508 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
C CHAB381_0030 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
C CHAB381_1668 nusG; transcription termination/antitermination factor NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D CHAB381_1746 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CHAB381_0412 conserved hypothetical protein K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CHAB381_1700 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CHAB381_0818 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CHAB381_0222 conserved hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CHAB381_1016 rrmJ; ribosomal RNA large subunit methyltransferase J K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
C 23S rRNA modification factors
D CHAB381_0221 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CHAB381_0536 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CHAB381_1743 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CHAB381_1016 rrmJ; ribosomal RNA large subunit methyltransferase J K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CHAB381_1750 hypothetical RNA pseudouridine synthase (RNA-uridine isomerase) (RNA pseudouridylate synthase) K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CHAB381_1289 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CHAB381_1741 hypothetical RNA pseudouridine synthase (RNA-uridine isomerase) (RNA pseudouridylate synthase) K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CHAB381_0704 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C CHAB381_0559 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
C CHAB381_0502 conserved hypothetical protein K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
C CHAB381_0488 prmA; ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
B rRNA processing factors
C CHAB381_1613 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C CHAB381_0377 conserved hypothetical protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C CHAB381_1060 era; GTP-binding protein Era K03595 era; GTPase
C CHAB381_0053 GTP-binding protein EngA K03977 engA; GTPase
C CHAB381_0676 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
B Other maturation factors
C CHAB381_1281 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase)(ppGpp synthetase I) ((P)ppGpp synthetase) K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C CHAB381_1678 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C CHAB381_1677 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
C CHAB381_0743 conserved hypothetical protein K07042 ybeY; probable rRNA maturation factor
C CHAB381_0555 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
C CHAB381_1047 ychF; GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024