+E Messenger RNA Biogenesis KO
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Messenger RNA Biogenesis - Callithrix jacchus (white-tufted-ear marmoset)
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AEukaryotic type
B mRNA processing factors
C 5' end processing
D Capping factors
E 100407846 RNMT; mRNA cap guanine-N7 methyltransferase K00565 RNMT; mRNA (guanine-N7-)-methyltransferase [EC:2.1.1.56]
E 100394937 RNGTT; mRNA-capping enzyme isoform X1 K13917 RNGTT; mRNA-capping enzyme [EC:2.7.7.50 3.6.1.74]
E 100389970 CDK7; cyclin-dependent kinase 7 isoform X1 K02202 CDK7; cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
E 100388430 CMTR1; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 isoform X1 K14589 CMTR1; cap1 methyltransferase [EC:2.1.1.57]
E 100412690 CMTR2; cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 K14590 CMTR2; cap2 methyltransferase [EC:2.1.1.296]
E 100396902 RAMAC; RNA guanine-N7 methyltransferase activating subunit K18708 FAM103A1; RNMT-activating mini protein
D Cap binding complex
E 100398174 NCBP1; nuclear cap-binding protein subunit 1 isoform X1 K12882 NCBP1; nuclear cap-binding protein subunit 1
E 100404338 NCBP2; nuclear cap-binding protein subunit 2 isoform X1 K12883 NCBP2; nuclear cap-binding protein subunit 2
E 118150460 NCBP2L; LOW QUALITY PROTEIN: nuclear cap-binding protein subunit 2-like K12883 NCBP2; nuclear cap-binding protein subunit 2
C 3' end processing
D Pre-mRNA cleavage factor Im (CFIm)
E 100394109 NUDT21; cleavage and polyadenylation specificity factor subunit 5 isoform X2 K14397 NUDT21; cleavage and polyadenylation specificity factor subunit 5
E 100387773 CPSF7; cleavage and polyadenylation specificity factor subunit 7 isoform X1 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
E 100393328 CPSF6; cleavage and polyadenylation specificity factor subunit 6 isoform X4 K14398 CPSF6_7; cleavage and polyadenylation specificity factor subunit 6/7
D Pre-mRNA cleavage factor IIm (CFIIm)
E 100386802 CLP1; polyribonucleotide 5'-hydroxyl-kinase Clp1 K14399 CLP1; polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
E 100392833 PCF11; pre-mRNA cleavage complex 2 protein Pcf11 isoform X2 K14400 PCF11; pre-mRNA cleavage complex 2 protein Pcf11
D Cleavage and polyadenylation specificity factor (CPSF) complex
E 100401197 CPSF1; cleavage and polyadenylation specificity factor subunit 1 isoform X1 K14401 CPSF1; cleavage and polyadenylation specificity factor subunit 1
E 100395136 CPSF2; cleavage and polyadenylation specificity factor subunit 2 isoform X2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 100407252 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 103788604 CPSF4; cleavage and polyadenylation specificity factor subunit 4 isoform X1 K14404 CPSF4; cleavage and polyadenylation specificity factor subunit 4
E 100895892 FIP1L1; pre-mRNA 3'-end-processing factor FIP1 K14405 FIP1L1; pre-mRNA 3'-end-processing factor FIP1
E 100405131 WDR33; pre-mRNA 3' end processing protein WDR33 isoform X1 K15542 PFS2; polyadenylation factor subunit 2
E 100388760 WDR82; WD repeat-containing protein 82 isoform X1 K14962 WDR82; COMPASS component SWD2
E 100386375 WD repeat-containing protein 82-like K14962 WDR82; COMPASS component SWD2
E 100410496 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 100396453 PPP1CA; serine/threonine-protein phosphatase PP1-alpha catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 100394435 PPP1CB; serine/threonine-protein phosphatase PP1-beta catalytic subunit isoform X1 K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 100391612 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 100402258 PPP1CC; serine/threonine-protein phosphatase PP1-gamma catalytic subunit K06269 PPP1C; serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]
E 100411906 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 isoform X2 K15544 SSU72; RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:3.1.3.16]
D Cleavage stimulation factor (CSTF) complex
E 100398694 CSTF1; cleavage stimulation factor subunit 1 K14406 CSTF1; cleavage stimulation factor subunit 1
E 100395529 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 1-like K14406 CSTF1; cleavage stimulation factor subunit 1
E 103796738 CSTF2T; cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 100402701 CSTF2; cleavage stimulation factor subunit 2 isoform X6 K14407 CSTF2; cleavage stimulation factor subunit 2
E 100397369 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2 tau variant-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 100408807 CSTF3; cleavage stimulation factor subunit 3 isoform X1 K14408 CSTF3; cleavage stimulation factor subunit 3
E 100412467 SYMPK; symplekin isoform X1 K06100 SYMPK; symplekin
D U7-dependent histone pre-mRNA processing factors
E 100401360 SNRPB; small nuclear ribonucleoprotein-associated proteins B and B' isoform X1 K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 108588051 small nuclear ribonucleoprotein-associated protein B-like K11086 SNRPB; small nuclear ribonucleoprotein B and B'
E 100385397 SNRPD3; small nuclear ribonucleoprotein Sm D3 K11088 SNRPD3; small nuclear ribonucleoprotein D3
E 100413994 SNRPE; small nuclear ribonucleoprotein E isoform X2 K11097 SNRPE; small nuclear ribonucleoprotein E
E 100389619 small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 100405665 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 108593723 small nuclear ribonucleoprotein E-like K11097 SNRPE; small nuclear ribonucleoprotein E
E 118146163 small nuclear ribonucleoprotein E K11097 SNRPE; small nuclear ribonucleoprotein E
E 100399108 SNRPF; small nuclear ribonucleoprotein F K11098 SNRPF; small nuclear ribonucleoprotein F
E 100403965 SNRPG; small nuclear ribonucleoprotein G isoform X2 K11099 SNRPG; small nuclear ribonucleoprotein G
E 108593219 small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 108587811 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 108588199 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 108589589 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 108589783 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 108591158 small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 108591170 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 108591630 small nuclear ribonucleoprotein G K11099 SNRPG; small nuclear ribonucleoprotein G
E 108593478 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 108593489 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 108593631 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 108593946 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 108594112 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 118147686 small nuclear ribonucleoprotein G-like K11099 SNRPG; small nuclear ribonucleoprotein G
E 100392698 LSM10; U7 snRNA-associated Sm-like protein LSm10 isoform X1 K25591 LSM10; U7 snRNA-associated Sm-like protein LSm10
E 100392744 LSM11; U7 snRNA-associated Sm-like protein LSm11 K25592 LSM11; U7 snRNA-associated Sm-like protein LSm11
E 100395136 CPSF2; cleavage and polyadenylation specificity factor subunit 2 isoform X2 K14402 CPSF2; cleavage and polyadenylation specificity factor subunit 2
E 100407252 CPSF3; cleavage and polyadenylation specificity factor subunit 3 isoform X1 K14403 CPSF3; cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
E 103796738 CSTF2T; cleavage stimulation factor subunit 2 tau variant K14407 CSTF2; cleavage stimulation factor subunit 2
E 100402701 CSTF2; cleavage stimulation factor subunit 2 isoform X6 K14407 CSTF2; cleavage stimulation factor subunit 2
E 100397369 LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2 tau variant-like K14407 CSTF2; cleavage stimulation factor subunit 2
E 100412467 SYMPK; symplekin isoform X1 K06100 SYMPK; symplekin
E 100408981 SLBP; histone RNA hairpin-binding protein isoform X1 K18710 SLBP; histone RNA hairpin-binding protein
E 100401726 CASP8AP2; CASP8-associated protein 2 isoform X1 K25593 CASP8AP2; CASP8-associated protein 2
D DRB sensitivity inducing factor (DSIF) complex
E 100413198 SUPT4H1; transcription elongation factor SPT4 K15171 SUPT4H1; transcription elongation factor SPT4
E 100412465 SUPT5H; transcription elongation factor SPT5 isoform X1 K15172 SUPT5H; transcription elongation factor SPT5
D N6-methyltransferase complex
E 100408434 METTL3; N6-adenosine-methyltransferase catalytic subunit isoform X2 K05925 METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]
E 100407273 METTL14; N6-adenosine-methyltransferase non-catalytic subunit isoform X1 K23960 METTL14; mRNA m6A methyltransferase non-catalytic subunit
E 100385149 METTL4; N(6)-adenine-specific methyltransferase METTL4 isoform X1 K24174 METTL4; N(6)-adenine-specific DNA methyltransferase [EC:2.1.1.72]
E 100394235 METTL16; RNA N6-adenosine-methyltransferase METTL16 isoform X1 K11393 METTL16; U6 snRNA m6A methyltransferase [EC:2.1.1.346]
E 100409826 WTAP; pre-mRNA-splicing regulator WTAP isoform X1 K22824 WTAP; pre-mRNA-splicing regulator WTAP
E 100386360 VIRMA; protein virilizer homolog isoform X1 K22910 VIRMA; protein virilizer
E 100408831 RBM15B; putative RNA-binding protein 15B K13190 RBM15; RNA-binding protein 15
E 100409871 RBM15; RNA-binding protein 15 isoform X1 K13190 RBM15; RNA-binding protein 15
E 100409664 ZC3H13; zinc finger CCCH domain-containing protein 13 isoform X8 K22909 ZC3H13; zinc finger CCCH domain-containing protein 13
E 100399104 CBLL1; E3 ubiquitin-protein ligase Hakai isoform X3 K15685 CBLL1; E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]
D Poly(A) addition factors
E 100400674 PAPOLA; poly(A) polymerase alpha isoform X3 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 100413972 PAPOLG; poly(A) polymerase gamma isoform X1 K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 100411243 PAPOLB; poly(A) polymerase beta K14376 PAP; poly(A) polymerase [EC:2.7.7.19]
E 100392265 TENT2; poly(A) RNA polymerase GLD2 isoform X4 K14079 PAPD4; poly(A) RNA polymerase GLD2 [EC:2.7.7.19]
E 100392106 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1 K18709 TUT1; speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
D Negative regulators of mRNA 3' end processing
E 100405252 BARD1; BRCA1-associated RING domain protein 1 K10683 BARD1; BRCA1-associated RING domain protein 1
E 100411227 RBM26; RNA-binding protein 26 isoform X19 K13192 RBM26; RNA-binding protein 26
E 100411384 FTO; alpha-ketoglutarate-dependent dioxygenase FTO isoform X2 K19469 FTO; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 100395449 ALKBH5; RNA demethylase ALKBH5 K10767 ALKBH5; mRNA N6-methyladenine demethylase [EC:1.14.11.53]
E 100405373 TARDBP; TAR DNA-binding protein 43 K23600 TARDBP; TAR DNA-binding protein 43
C Other processing factors
D 100406213 DHX40; probable ATP-dependent RNA helicase DHX40 isoform X2 K18711 DHX40; ATP-dependent RNA helicase DHX40 [EC:5.6.2.6]
D 100388348 KIN; DNA/RNA-binding protein KIN17 isoform X7 K13102 KIN; DNA/RNA-binding protein KIN17
D 100410209 METTL8; tRNA N(3)-methylcytidine methyltransferase METTL8, mitochondrial isoform X1 K24975 METTL8; mRNA N(3)-methylcytidine methyltransferase METTL8 [EC:2.1.1.-]
D 100409417 METTL22; methyltransferase-like protein 22 K23040 METTL22; methyltransferase-like protein 22 [EC:2.1.1.-]
D 100403291 TENT5A; terminal nucleotidyltransferase 5A K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 100411073 TENT5B; terminal nucleotidyltransferase 5B K23033 TENT5A_B; terminal nucleotidyltransferase 5A/B [EC:2.7.7.-]
D 100397289 TENT5C; terminal nucleotidyltransferase 5C isoform X2 K23034 TENT5C; terminal nucleotidyltransferase 5C [EC:2.7.7.19]
D 100400284 TENT5D; terminal nucleotidyltransferase 5D K23035 TENT5D; terminal nucleotidyltransferase 5D [EC:2.7.7.19]
D 100409046 ZC3H14; zinc finger CCCH domain-containing protein 14 isoform X2 K23038 ZC3H14; zinc finger CCCH domain-containing protein 14
D 100392630 SRRT; serrate RNA effector molecule homolog isoform X1 K27103 SRRT; serrate RNA effector molecule
B mRNA surveillance and transport factors
C Transport factors
D EJC complex
E 100399389 RBM8A; RNA-binding protein 8A isoform X1 K12876 RBM8A; RNA-binding protein 8A
E 100397294 MAGOHB; protein mago nashi homolog 2 isoform X1 K12877 MAGOH; protein mago nashi
E 100414778 MAGOH; protein mago nashi homolog K12877 MAGOH; protein mago nashi
E 118153902 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 100395064 DDX39B; spliceosome RNA helicase DDX39B K12812 DDX39B; ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
E 100414274 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 118143659 eukaryotic initiation factor 4A-III-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 100390321 CCDC174; coiled-coil domain-containing protein 174 K25178 CCDC174; coiled-coil domain-containing protein 174
E 100409366 CASC3; protein CASC3 K14323 CASC3; protein CASC3
E 100390014 SAP18; histone deacetylase complex subunit SAP18 K14324 SAP18; histone deacetylase complex subunit SAP18
E 100385009 PNN; pinin K13114 PNN; pinin
E 100395500 ACIN1; LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus K12875 ACIN1; apoptotic chromatin condensation inducer in the nucleus
E 100403592 RNPS1; RNA-binding protein with serine-rich domain 1 isoform X2 K14325 RNPS1; RNA-binding protein with serine-rich domain 1
E 100385227 LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like K13171 SRRM1; serine/arginine repetitive matrix protein 1
E 100389073 SRRM1; serine/arginine repetitive matrix protein 1 isoform X5 K13171 SRRM1; serine/arginine repetitive matrix protein 1
D TREX complex
E 100393939 THOC1; THO complex subunit 1 isoform X2 K12878 THOC1; THO complex subunit 1
E 100390990 LOW QUALITY PROTEIN: THO complex subunit 2 K12879 THOC2; THO complex subunit 2
E 100399788 THOC2; THO complex subunit 2 isoform X3 K12879 THOC2; THO complex subunit 2
E 100386008 LOW QUALITY PROTEIN: THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 100400596 THO complex subunit 3 K12880 THOC3; THO complex subunit 3
E 118153902 ALYREF; THO complex subunit 4 K12881 THOC4; THO complex subunit 4
E 100412070 THOC5; THO complex subunit 5 homolog isoform X1 K13174 THOC5; THO complex subunit 5
E 103791587 LOW QUALITY PROTEIN: THO complex subunit 5 homolog K13174 THOC5; THO complex subunit 5
E 100414440 THOC6; THO complex subunit 6 homolog isoform X2 K13175 THOC6; THO complex subunit 6
E 100413500 THOC7; THO complex subunit 7 homolog isoform X1 K13176 THOC7; THO complex subunit 7
E 118154575 THO complex subunit 7 homolog K13176 THOC7; THO complex subunit 7
D TREX-2 complex
E 100408461 PCID2; PCI domain-containing protein 2 isoform X1 K23801 PCID2; nuclear mRNA export protein PCID2/THP1
E 100400302 SEM1; 26S proteasome complex subunit SEM1 isoform X1 K10881 SHFM1; 26 proteasome complex subunit DSS1
E 103788381 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 100411722 ENY2; transcription and mRNA export factor ENY2 isoform X1 K11368 ENY2; enhancer of yellow 2 transcription factor
E 100396339 transcription and mRNA export factor ENY2-like K11368 ENY2; enhancer of yellow 2 transcription factor
E 100399306 CETN2; centrin-2 K10840 CETN2; centrin-2
E 103792567 centrin-2-like K10840 CETN2; centrin-2
E 103794888 centrin-2-like K10840 CETN2; centrin-2
E 100411849 CETN3; centrin-3 K16466 CETN3; centrin-3
E 100405224 MCM3AP; germinal-center associated nuclear protein isoform X1 K24317 MCM3AP; germinal-center associated nuclear protein [EC:2.3.1.48]
D Nuclear pore complex
E 100415679 TPR; nucleoprotein TPR K09291 TPR; nucleoprotein TPR
E 100403780 RAE1; mRNA export factor RAE1 isoform X2 K14298 RAE1; mRNA export factor
E 100410639 SEC13; protein SEC13 homolog isoform X1 K14004 SEC13; protein transport protein SEC13
E 100393550 NUP37; nucleoporin Nup37 isoform X1 K14302 NUP37; nuclear pore complex protein Nup37
E 100393883 NUP85; nuclear pore complex protein Nup85 isoform X1 K14304 NUP85; nuclear pore complex protein Nup85
E 100410679 NUP43; nucleoporin Nup43 isoform X2 K14305 NUP43; nuclear pore complex protein Nup43
E 100409558 NUP50; nuclear pore complex protein Nup50 K14295 NUP50; nuclear pore complex protein Nup50
E 100413060 LOW QUALITY PROTEIN: nuclear pore complex protein Nup50-like K14295 NUP50; nuclear pore complex protein Nup50
E 100397958 NUP54; nucleoporin p54 isoform X3 K14308 NUP54; nuclear pore complex protein Nup54
E 100387104 NUP62; nuclear pore glycoprotein p62 K14306 NUP62; nuclear pore complex protein Nup62
E 100402818 LOW QUALITY PROTEIN: nuclear pore glycoprotein p62-like K14306 NUP62; nuclear pore complex protein Nup62
E 100392788 NUP62CL; nucleoporin-62 C-terminal-like protein K14306 NUP62; nuclear pore complex protein Nup62
E 100398342 NUP88; nuclear pore complex protein Nup88 isoform X1 K14318 NUP88; nuclear pore complex protein Nup88
E 100407646 NUP93; nuclear pore complex protein Nup93 isoform X1 K14309 NUP93; nuclear pore complex protein Nup93
E 100406506 nuclear pore complex protein Nup98-Nup96-like K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 100414799 NUP98; nuclear pore complex protein Nup98-Nup96 isoform X1 K14297 NUP98; nuclear pore complex protein Nup98-Nup96
E 100413940 NUP107; nuclear pore complex protein Nup107 isoform X1 K14301 NUP107; nuclear pore complex protein Nup107
E 100396989 NUP133; nuclear pore complex protein Nup133 K14300 NUP133; nuclear pore complex protein Nup133
E 100412066 NUP188; nucleoporin NUP188 K14311 NUP188; nuclear pore complex protein Nup188
E 100395301 NUP153; nuclear pore complex protein Nup153 isoform X1 K14296 NUP153; nuclear pore complex protein Nup153
E 100392143 NUP155; nuclear pore complex protein Nup155 isoform X1 K14312 NUP155; nuclear pore complex protein Nup155
E 100400079 NUP160; nuclear pore complex protein Nup160 isoform X1 K14303 NUP160; nuclear pore complex protein Nup160
E 100412134 NUP35; nucleoporin NUP35 isoform X3 K14313 NUP35; nuclear pore complex protein Nup53
E 100413815 NUP205; nuclear pore complex protein Nup205 isoform X2 K14310 NUP205; nuclear pore complex protein Nup205
E 100386475 NUP210; nuclear pore membrane glycoprotein 210 isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 100402434 NUP210L; nuclear pore membrane glycoprotein 210-like isoform X1 K14314 NUP210; nuclear pore complex protein Nup210
E 100400586 NUP214; nuclear pore complex protein Nup214 isoform X2 K14317 NUP214; nuclear pore complex protein Nup214
E 100402183 nuclear envelope pore membrane protein POM 121C isoform X1 K14316 POM121; nuclear pore complex protein Nup121
E 100414248 POM121L2; POM121-like protein 2 K14316 POM121; nuclear pore complex protein Nup121
E 100385581 NUP58; nucleoporin p58/p45 isoform X1 K14307 NUPL1; nucleoporin p58/p45
E 100391607 NUP42; nucleoporin NUP42 isoform X1 K14321 NUPL2; nucleoporin-like protein 2
E 100385239 NDC1; nucleoporin NDC1 K14315 NDC1; nucleoporin NDC1
E 100895681 SEH1L; nucleoporin SEH1 isoform X1 K14299 SEH1; nucleoporin SEH1
E 100386461 RANBP2; E3 SUMO-protein ligase RanBP2 isoform X6 K12172 RANBP2; E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
E 100396716 SENP2; sentrin-specific protease 2 isoform X13 K03345 SENP2; sentrin-specific protease 2 (axin associating molecule) [EC:3.4.22.68]
E 100405154 AAAS; aladin isoform X1 K14320 AAAS; aladin
E 100411849 CETN3; centrin-3 K16466 CETN3; centrin-3
E 100407740 GLE1; mRNA export factor GLE1 K18723 GLE1; nucleoporin GLE1
E 100399719 NXF1; nuclear RNA export factor 1 isoform X2 K14284 NXF; nuclear RNA export factor
E 100386998 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 100414986 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 100397387 NXF3; nuclear RNA export factor 3 isoform X6 K14284 NXF; nuclear RNA export factor
E 103790736 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor
E 100405107 NXT1; NTF2-related export protein 1 K14285 NXT1_2; NTF2-related export protein 1/2
E 100410924 NXT2; NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2
E 108592063 NPAP1; nuclear pore-associated protein 1 K26564 NPAP1; nuclear pore-associated protein 1
D Ran-mediated transport factors
E 100400787 RAN; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran
E 100398495 ANP32A; acidic leucine-rich nuclear phosphoprotein 32 family member A isoform X3 K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 100402864 acidic leucine-rich nuclear phosphoprotein 32 family member A-like K18646 ANP32A_C_D; acidic leucine-rich nuclear phosphoprotein 32 family member A/C/D
E 100400333 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B isoform X2 K18647 ANP32B; acidic leucine-rich nuclear phosphoprotein 32 family member B
E 100551510 TNFSF13; tumor necrosis factor ligand superfamily member 13 K05475 TNFSF13; tumor necrosis factor ligand superfamily member 13
E 100896727 ELAVL1; ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 100395627 ELAVL2; ELAV-like protein 2 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 100391077 ELAVL3; ELAV-like protein 3 isoform X1 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 100393436 ELAVL4; ELAV-like protein 4 isoform X5 K13208 ELAVL2_3_4; ELAV like protein 2/3/4
E 100385292 FAF2; FAS-associated factor 2 isoform X1 K18726 FAF2; FAS-associated factor 2
E 100403131 VCP; transitional endoplasmic reticulum ATPase isoform X1 K13525 VCP; transitional endoplasmic reticulum ATPase
E 100409766 VCPKMT; protein N-lysine methyltransferase METTL21D isoform X3 K21806 VCPKMT; protein N-lysine methyltransferase METTL21D [EC:2.1.1.-]
E 100397373 TNPO2; transportin-2 isoform X1 K18727 TNPO2; transportin-2
E 100410392 XPO1; exportin-1 isoform X1 K14290 XPO1; exportin-1
E 100389347 XPO7; exportin-7 K18460 XPO7; exportin-7
E 100403870 RANBP17; ran-binding protein 17 isoform X1 K24115 RANBP17; Ran-binding protein 17
E 100395992 RANGAP1; ran GTPase-activating protein 1 isoform X2 K14319 RANGAP1; Ran GTPase-activating protein 1
E 100391580 TAF15; TATA-binding protein-associated factor 2N isoform X1 K14651 TAF15; transcription initiation factor TFIID subunit 15
E 100396362 LOW QUALITY PROTEIN: TATA-binding protein-associated factor 2N-like K14651 TAF15; transcription initiation factor TFIID subunit 15
E 108593199 LOW QUALITY PROTEIN: TATA-binding protein-associated factor 2N K14651 TAF15; transcription initiation factor TFIID subunit 15
D eIF4F and regulatory proteins
E 100395777 EIF4E; eukaryotic translation initiation factor 4E isoform X5 K03259 EIF4E; translation initiation factor 4E
E 100415426 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 100401386 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 100406173 eukaryotic initiation factor 4A-II-like K03257 EIF4A; translation initiation factor 4A
E 100388544 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 100406521 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 100414675 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 100390541 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 100391519 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X2 K03260 EIF4G; translation initiation factor 4G
E 100399688 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 100401147 EIF4B; eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B
E 100395825 EIF4H; eukaryotic translation initiation factor 4H K24086 EIF4H; translation initiation factor 4H
E 100386453 EIF4EBP1; eukaryotic translation initiation factor 4E-binding protein 1 K07205 EIF4EBP1; eukaryotic translation initiation factor 4E binding protein 1
E 100407004 EIF4EBP2; eukaryotic translation initiation factor 4E-binding protein 2 K18644 EIF4EBP2; eukaryotic translation initiation factor 4E binding protein 2
E 100394085 EIF4EBP3; eukaryotic translation initiation factor 4E-binding protein 3 K18645 EIF4EBP3; eukaryotic translation initiation factor 4E binding protein 3
E 100399016 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X2 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 100398030 ANGEL1; protein angel homolog 1 isoform X2 K18729 ANGEL; protein angel
E 100405693 ANGEL2; protein angel homolog 2 isoform X1 K18729 ANGEL; protein angel
E 100399500 FXR1; RNA-binding protein FXR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 100387469 FXR2; RNA-binding protein FXR2 K15516 FMR; fragile X mental retardation protein
E 100414871 FMR1; fragile X messenger ribonucleoprotein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 100388277 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 100411412 CYFIP1; LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 100394560 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 100410295 TACC3; transforming acidic coiled-coil-containing protein 3 isoform X1 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 100402805 CPEB2; LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100393658 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100392612 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100389966 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100387734 DDX3Y; ATP-dependent RNA helicase DDX3Y K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 100399667 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 100401755 GIGYF2; GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 100413746 GIGYF1; GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 100389746 PABPC4L; polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 100413032 PABPC1; polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 100395684 PABPC3; polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 100406206 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 100399096 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 100399785 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 100385809 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 100403792 LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 100406124 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 100411130 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 108589964 PABPC1L2B; polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 100392023 PAIP1; polyadenylate-binding protein-interacting protein 1 isoform X1 K14322 PAIP1; polyadenylate-binding protein-interacting protein 1
E 100410887 PAIP2; polyadenylate-binding protein-interacting protein 2 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 100896730 polyadenylate-binding protein-interacting protein 2-like K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 100398054 PAIP2B; polyadenylate-binding protein-interacting protein 2B isoform X1 K27470 PAIP2; polyadenylate-binding protein-interacting protein 2
E 100409587 SKIC2; SKI2 subunit of superkiller complex protein isoform X2 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 100404683 DEAF1; deformed epidermal autoregulatory factor 1 homolog isoform X1 K23041 DEAF1; deformed epidermal autoregulatory factor 1
E 100388540 MCTS2; malignant T-cell-amplified sequence 2 K07575 MCTS; malignant T-cell-amplified sequence
E 100396539 MCTS1; malignant T-cell-amplified sequence 1 isoform X2 K07575 MCTS; malignant T-cell-amplified sequence
E 103795457 DENR; density-regulated protein K24272 DENR; density-regulated protein
D APOBEC1-ACF complex
E 100394516 APOBEC1; C->U-editing enzyme APOBEC-1 isoform X2 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 100389343 A1CF; APOBEC1 complementation factor isoform X1 K24978 A1CF; APOBEC1 complementation factor
D Other transport factors
E 108587742 PYM1; partner of Y14 and mago isoform X1 K14294 WIBG; partner of Y14 and mago
E 100392244 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100403489 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100410389 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100411573 heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100409067 heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100415175 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100407564 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100414716 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100385123 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100413569 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100413454 heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100385748 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100385762 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100386652 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100895835 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103796241 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108588388 heterogeneous nuclear ribonucleoprotein A1-like 3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108588454 heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108591245 heterogeneous nuclear ribonucleoprotein A1 isoform X2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 118142886 heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 118143590 heterogeneous nuclear ribonucleoprotein A3-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 118148454 heterogeneous nuclear ribonucleoprotein A1-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 118153440 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 128928150 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 128930023 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 128932351 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 128932643 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100390978 MSI2; RNA-binding protein Musashi homolog 2 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 100395069 DAZAP1; DAZ-associated protein 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 100412167 MSI1; RNA-binding protein Musashi homolog 1 isoform X1 K14411 MSI; RNA-binding protein Musashi
E 100404628 HBS1L; HBS1-like protein isoform X1 K14416 HBS1; elongation factor 1 alpha-like protein
E 100414352 PELO; protein pelota homolog K06965 PELO; protein pelota
E 100396934 polyadenylate-binding protein 2 isoform X1 K14396 PABPN1; polyadenylate-binding protein 2
E 100389399 PABPN1L; embryonic polyadenylate-binding protein 2 K14396 PABPN1; polyadenylate-binding protein 2
E 100414615 DDX19A; ATP-dependent RNA helicase DDX19A K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 103789493 ATP-dependent RNA helicase DDX19B isoform X6 K18655 DDX19; ATP-dependent RNA helicase DDX19/DBP5 [EC:5.6.2.7]
E 100407711 DDX25; ATP-dependent RNA helicase DDX25 isoform X1 K18656 DDX25; ATP-dependent RNA helicase DDX25 [EC:5.6.2.7]
E 100408254 XAB2; pre-mRNA-splicing factor SYF1 isoform X1 K12867 SYF1; pre-mRNA-splicing factor SYF1
E 100403936 SARNP; SAP domain-containing ribonucleoprotein isoform X7 K18732 SARNP; SAP domain-containing ribonucleoprotein
E 100409243 SAP domain-containing ribonucleoprotein-like K18732 SARNP; SAP domain-containing ribonucleoprotein
E 100399095 RCC1; regulator of chromosome condensation K11493 RCC1; regulator of chromosome condensation
E 100407949 LARP6; la-related protein 6 K18733 LARP6; la-related protein 6
E 100405797 PURA; transcriptional activator protein Pur-alpha K21772 PURA; transcriptional activator protein Pur-alpha
E 100389193 PURB; transcriptional activator protein Pur-beta K21799 PURB; transcriptional activator protein Pur-beta
E 100398897 POLDIP3; polymerase delta-interacting protein 3 K22414 POLDIP3; polymerase delta-interacting protein 3
E 100412100 ZC3H11A; zinc finger CCCH domain-containing protein 11A K22415 ZC3H11; zinc finger CCCH domain-containing protein 11
E 100410553 LENG8; leukocyte receptor cluster member 8 K23802 LENG8; SAC3 family protein LENG8/THP3
E 100403580 PATL2; protein PAT1 homolog 2 isoform X1 K24823 PATL2; protein PAT1 homolog 2
C Surveillance factors
D Surveillance complex
E 100407263 ETF1; eukaryotic peptide chain release factor subunit 1 isoform X1 K03265 ETF1; peptide chain release factor subunit 1
E 100413998 GSPT1; eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1 K03267 ERF3; peptide chain release factor subunit 3
E 100396166 GSPT2; eukaryotic peptide chain release factor GTP-binding subunit ERF3B K03267 ERF3; peptide chain release factor subunit 3
E 118155343 eukaryotic peptide chain release factor GTP-binding subunit ERF3A K03267 ERF3; peptide chain release factor subunit 3
E 100388434 UPF1; regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 100394499 UPF2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 100385275 UPF3A; regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 100388330 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
D Protein phosphatase 2A
E 100395261 PPP2CB; serine/threonine-protein phosphatase 2A catalytic subunit beta isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 100398536 PPP2CA; serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform K04382 PPP2C; serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]
E 100408674 PPP2R1B; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform isoform X3 K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 100413664 PPP2R1A; serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A
E 100385385 PPP2R2D; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform isoform X1 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 100407485 PPP2R2A; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X3 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 100407627 PPP2R2B; serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X6 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 100386371 PPP2R2C; protein phosphatase 2, regulatory subunit B, gamma isoform X3 K04354 PPP2R2; serine/threonine-protein phosphatase 2A regulatory subunit B
E 100399834 PPP2R3C; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 100398540 PPP2R3A; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 100404394 PPP2R3B; serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 128928017 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta isoform X1 K11583 PPP2R3; serine/threonine-protein phosphatase 2A regulatory subunit B''
E 100415024 PPP2R5C; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 100413827 PPP2R5E; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 100407360 PPP2R5B; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 100411858 PPP2R5A; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform isoform X1 K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
E 100414007 PPP2R5D; serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform K11584 PPP2R5; serine/threonine-protein phosphatase 2A regulatory subunit B'
D Other surveillance factors
E 100410734 SMG1; serine/threonine-protein kinase SMG1 isoform X4 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 100403998 SMG5; nonsense-mediated mRNA decay factor SMG5 isoform X1 K11125 SMG5; protein SMG5
E 100395317 SMG6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 100399275 SMG7; nonsense-mediated mRNA decay factor SMG7 isoform X7 K14409 SMG7; protein SMG7
E 100405117 SMG8; LOW QUALITY PROTEIN: nonsense-mediated mRNA decay factor SMG8 K18734 SMG8; protein SMG8
E 100395804 SMG9; nonsense-mediated mRNA decay factor SMG9 isoform X5 K18735 SMG9; protein SMG9
E 100401755 GIGYF2; GRB10-interacting GYF protein 2 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 100413746 GIGYF1; GRB10-interacting GYF protein 1 isoform X1 K18730 GIGYF; PERQ amino acid-rich with GYF domain-containing protein
E 100404936 SECISBP2; selenocysteine insertion sequence-binding protein 2 isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 100393197 SECISBP2L; selenocysteine insertion sequence-binding protein 2-like isoform X1 K19539 SECISBP2; selenocysteine insertion sequence-binding protein 2
E 100390854 DHX34; probable ATP-dependent RNA helicase DHX34 K20101 DHX34; ATP-dependent RNA helicase DHX34 [EC:5.6.2.6]
E 100410520 GTPBP1; GTP-binding protein 1 isoform X1 K24887 GTPBP1; GTP-binding protein 1
C Factors involved in mRNA localization
D Cargo complex
E 100403964 PUM3; pumilio homolog 3 isoform X2 K14844 PUF6; pumilio homology domain family member 6
E 100385252 MYO5C; unconventional myosin-Vc isoform X1 K10357 MYO5; myosin V
E 100394767 MYO5A; unconventional myosin-Va isoform X2 K10357 MYO5; myosin V
E 100406508 MYO5B; unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 100415284 BICD2; protein bicaudal D homolog 2 isoform X3 K18739 BICD; protein bicaudal D
E 100391248 BICD1; protein bicaudal D homolog 1 isoform X2 K18739 BICD; protein bicaudal D
E 100410724 EXD1; piRNA biogenesis protein EXD1 isoform X1 K18740 EXD1; exonuclease 3'-5' domain-containing protein 1
D Factors that have mRNA localization signals
E 100398645 actin, cytoplasmic 2-like K05692 ACTB_G1; actin beta/gamma 1
E 100404409 actin, cytoplasmic 1-like K05692 ACTB_G1; actin beta/gamma 1
E 100406907 actin, cytoplasmic 2-like K05692 ACTB_G1; actin beta/gamma 1
E 100410882 actin, cytoplasmic 2-like K05692 ACTB_G1; actin beta/gamma 1
E 100412618 actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 100409006 ACTG1; actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 100388094 actin, cytoplasmic 2 K05692 ACTB_G1; actin beta/gamma 1
E 100406296 ACTB; actin, cytoplasmic 1 K05692 ACTB_G1; actin beta/gamma 1
E 100401391 actin, cytoplasmic 2-like K05692 ACTB_G1; actin beta/gamma 1
E 118150586 actin, cytoplasmic 2-like K05692 ACTB_G1; actin beta/gamma 1
E 100397069 MBP; myelin basic protein isoform X4 K17269 MBP; myelin basic protein
E 100408168 VIM; vimentin K07606 VIM; vimentin
E 103790482 metallothionein-1L-like K14739 MT1_2; metallothionein 1/2
E 103790816 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 103792630 metallothionein-2E-like K14739 MT1_2; metallothionein 1/2
E 100410187 metallothionein-I, hippocampal-like K14739 MT1_2; metallothionein 1/2
E 103789437 metallothionein-1E K14739 MT1_2; metallothionein 1/2
E 100894903 metallothionein-1E isoform X2 K14739 MT1_2; metallothionein 1/2
E 100404252 MT2A; metallothionein-2 isoform X2 K14739 MT1_2; metallothionein 1/2
E 100406557 metallothionein-1E K14739 MT1_2; metallothionein 1/2
E 100896966 metallothionein-2A K14739 MT1_2; metallothionein 1/2
E 100407281 metallothionein-1L-like K14739 MT1_2; metallothionein 1/2
E 118151576 metallothionein-1E-like K14739 MT1_2; metallothionein 1/2
E 100407754 MYC; myc proto-oncogene protein K04377 MYC; Myc proto-oncogene protein
E 108587669 GDF1; embryonic growth/differentiation factor 1 K05495 GDF1; growth differentiation factor 1
E 100393569 TBX6; LOW QUALITY PROTEIN: T-box transcription factor TBX6 K10180 TBX6; T-box protein 6
E 100413242 NANOS1; nanos homolog 1 K18741 NANOS1; protein nanos 1
D Trans-acting binding proteins
E 100411875 ZBP1; Z-DNA-binding protein 1 isoform X1 K12965 ZBP1; Z-DNA binding protein 1
E 100399862 FUBP3; far upstream element-binding protein 3 isoform X1 K13210 FUBP; far upstream element-binding protein
E 100399048 KHSRP; far upstream element-binding protein 2 isoform X1 K13210 FUBP; far upstream element-binding protein
E 100401762 FUBP1; far upstream element-binding protein 1 isoform X9 K13210 FUBP; far upstream element-binding protein
E 100397123 EEF1A2; elongation factor 1-alpha 2 K03231 EEF1A; elongation factor 1-alpha
E 100415334 EEF1A1; elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 100894850 elongation factor 1-alpha 1 K03231 EEF1A; elongation factor 1-alpha
E 100385903 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 100398916 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 100400599 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 100404981 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 128932493 elongation factor 1-alpha 1-like K03231 EEF1A; elongation factor 1-alpha
E 100415027 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 100393926 EEF1G; elongation factor 1-gamma K03233 EEF1G; elongation factor 1-gamma
E 100399984 elongation factor 1-gamma-like K03233 EEF1G; elongation factor 1-gamma
E 100401647 HNRNPA2B1; heterogeneous nuclear ribonucleoproteins A2/B1 isoform X1 K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 100399278 LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoproteins A2/B1-like K13158 HNRNPA2B1; heterogeneous nuclear ribonucleoprotein A2/B1
E 100414479 HAX1; HCLS1-associated protein X-1 isoform X1 K16220 HAX1; HCLS1-associated protein X-1
E 100385345 AGFG1; arf-GAP domain and FG repeat-containing protein 1 isoform X1 K15044 AGFG1; Arf-GAP domain and FG repeats-containing protein 1
E 100410699 double-stranded RNA-binding protein Staufen homolog 2-like K17597 STAU; double-stranded RNA-binding protein Staufen
E 100409920 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 100393512 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 100394155 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3 isoform X1 K13197 IGF2BP3; insulin-like growth factor 2 mRNA-binding protein 3
E 100387091 PTBP1; polypyrimidine tract-binding protein 1 isoform X1 K13218 PTBP1; polypyrimidine tract-binding protein 1
E 100402805 CPEB2; LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100393658 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100392612 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100389966 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
D Other mRNA localization factors
E 100399500 FXR1; RNA-binding protein FXR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 100387469 FXR2; RNA-binding protein FXR2 K15516 FMR; fragile X mental retardation protein
E 100414871 FMR1; fragile X messenger ribonucleoprotein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 100388277 CYFIP2; cytoplasmic FMR1-interacting protein 2 isoform X1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 100411412 CYFIP1; LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein 1 K05749 CYFIP; cytoplasmic FMR1 interacting protein
E 100409398 PCBP2; poly(rC)-binding protein 2 isoform X3 K13162 PCBP2; poly(rC)-binding protein 2
E 100391375 LOW QUALITY PROTEIN: poly(rC)-binding protein 2-like K13162 PCBP2; poly(rC)-binding protein 2
E 100392590 poly(rC)-binding protein 2-like K13162 PCBP2; poly(rC)-binding protein 2
E 100408015 PCBP3; poly(rC)-binding protein 3 isoform X3 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 100415533 PCBP4; poly(rC)-binding protein 4 isoform X1 K21444 PCBP3_4; poly(rC)-binding protein 3/4
E 100387407 CAPRIN1; caprin-1 isoform X1 K18743 CAPRIN1; caprin-1
E 100398860 CAPRIN2; caprin-2 isoform X10 K18744 CAPRIN2; caprin-2
E 100401646 YBX1; Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
E 100402964 LOW QUALITY PROTEIN: Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
C mRNA cycle factors
D Common to processing body (P body) and stress granule
E 100412678 XRN1; 5'-3' exoribonuclease 1 isoform X7 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 100390940 AGO2; protein argonaute-2 isoform X2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 100389074 AGO4; protein argonaute-4 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 100387270 AGO3; protein argonaute-3 isoform X1 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 100386910 AGO1; protein argonaute-1 isoform X2 K11593 ELF2C; eukaryotic translation initiation factor 2C
E 100395777 EIF4E; eukaryotic translation initiation factor 4E isoform X5 K03259 EIF4E; translation initiation factor 4E
E 100415426 EIF4E1B; eukaryotic translation initiation factor 4E type 1B K03259 EIF4E; translation initiation factor 4E
E 100401386 EIF4E2; eukaryotic translation initiation factor 4E type 2 isoform X1 K03259 EIF4E; translation initiation factor 4E
E 100388434 UPF1; regulator of nonsense transcripts 1 isoform X1 K14326 UPF1; regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
E 100387734 DDX3Y; ATP-dependent RNA helicase DDX3Y K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 100399667 DDX3X; ATP-dependent RNA helicase DDX3X isoform X1 K11594 DDX3X; ATP-dependent RNA helicase DDX3X [EC:5.6.2.7]
E 100408438 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 100410023 MEX3C; RNA-binding E3 ubiquitin-protein ligase MEX3C K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 100410413 MEX3A; RNA-binding protein MEX3A K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 100400135 MEX3D; LOW QUALITY PROTEIN: RNA-binding protein MEX3D K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 100403790 MEX3B; RNA-binding protein MEX3B K15686 MEX3; RNA-binding protein MEX3 [EC:2.3.2.27]
E 100409995 FASTK; fas-activated serine/threonine kinase isoform X1 K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 100391071 LOW QUALITY PROTEIN: fas-activated serine/threonine kinase-like K08290 FASTK; Fas-activated serine/threonine kinase [EC:2.7.11.8]
E 100390973 LSM14B; protein LSM14 homolog B isoform X1 K18749 LSM14; protein LSM14
E 100411266 LSM14A; protein LSM14 homolog A isoform X1 K18749 LSM14; protein LSM14
E 118154007 LOW QUALITY PROTEIN: protein LSM14 homolog A-like K18749 LSM14; protein LSM14
E 100388387 poly(rC)-binding protein 1 isoform X2 K12889 PCBP1; poly(rC)-binding protein 1
E 100405918 PCBP1; poly(rC)-binding protein 1 K12889 PCBP1; poly(rC)-binding protein 1
E 103788804 poly(rC)-binding protein 1-like K12889 PCBP1; poly(rC)-binding protein 1
E 100409398 PCBP2; poly(rC)-binding protein 2 isoform X3 K13162 PCBP2; poly(rC)-binding protein 2
E 100391375 LOW QUALITY PROTEIN: poly(rC)-binding protein 2-like K13162 PCBP2; poly(rC)-binding protein 2
E 100392590 poly(rC)-binding protein 2-like K13162 PCBP2; poly(rC)-binding protein 2
E 100401646 YBX1; Y-box-binding protein 1 isoform X1 K09276 YBX1; Y-box-binding protein 1
E 100402964 LOW QUALITY PROTEIN: Y-box-binding protein 1-like K09276 YBX1; Y-box-binding protein 1
E 100399549 WTIP; Wilms tumor protein 1-interacting protein K16682 AJUBA; LIM domain-containing protein
E 100392345 AJUBA; LIM domain-containing protein ajuba isoform X1 K16682 AJUBA; LIM domain-containing protein
E 100394908 LIMD1; LIM domain-containing protein 1 K16682 AJUBA; LIM domain-containing protein
E 100394516 APOBEC1; C->U-editing enzyme APOBEC-1 isoform X2 K16932 APOBEC1; C->U-editing enzyme APOBEC1 [EC:3.5.4.36]
E 100397263 APOBEC3C; LOW QUALITY PROTEIN: DNA dC->dU-editing enzyme APOBEC-3C K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100413502 DNA dC->dU-editing enzyme APOBEC-3G-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100393962 DNA dC->dU-editing enzyme APOBEC-3G K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100412309 APOBEC3H; DNA dC->dU-editing enzyme APOBEC-3H isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100413381 DNA dC->dU-editing enzyme APOBEC-3G K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100397628 APOBEC3G; DNA dC->dU-editing enzyme APOBEC-3G K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100386727 DNA dC->dU-editing enzyme APOBEC-3G K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100387905 APOBEC3A; DNA dC->dU-editing enzyme APOBEC-3A K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100412662 DNA dC->dU-editing enzyme APOBEC-3G isoform X1 K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 128929074 DNA dC->dU-editing enzyme APOBEC-3G-like K18750 APOBEC3; C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
E 100396313 MOV10; helicase MOV-10 isoform X1 K18422 MOV10; helicase MOV-10 [EC:5.6.2.5]
E 100398839 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 100896925 PNRC2; proline-rich nuclear receptor coactivator 2 K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 128932030 proline-rich nuclear receptor coactivator 2-like K18751 PNRC2; proline-rich nuclear receptor coactivator 2
E 100413875 TNPO1; transportin-1 isoform X1 K18752 TNPO1; transportin-1
E 100410734 SMG1; serine/threonine-protein kinase SMG1 isoform X4 K08873 SMG1; serine/threonine-protein kinase SMG1 [EC:2.7.11.1]
E 100403998 SMG5; nonsense-mediated mRNA decay factor SMG5 isoform X1 K11125 SMG5; protein SMG5
E 100395317 SMG6; telomerase-binding protein EST1A isoform X1 K11124 SMG6; protein SMG6 [EC:3.1.-.-]
E 100399275 SMG7; nonsense-mediated mRNA decay factor SMG7 isoform X7 K14409 SMG7; protein SMG7
E 100397247 ZFP36; mRNA decay activator protein ZFP36 K15308 TTP; tristetraprolin
E 100386590 ZFP36L2; mRNA decay activator protein ZFP36L2 K18753 ZFP36L; butyrate response factor
E 100405281 ZFP36L1; mRNA decay activator protein ZFP36L1 K18753 ZFP36L; butyrate response factor
E 100388273 protein lin-28 homolog A-like K18754 LIN28; protein lin-28
E 100405014 LIN28A; protein lin-28 homolog A K18754 LIN28; protein lin-28
E 100400137 LIN28B; protein lin-28 homolog B isoform X1 K18754 LIN28; protein lin-28
E 100406610 protein lin-28 homolog A-like K18754 LIN28; protein lin-28
E 118143095 protein lin-28 homolog A K18754 LIN28; protein lin-28
E 100403524 HTT; huntingtin K04533 HD; huntingtin
E 100399463 IPO8; importin-8 isoform X1 K18755 IPO8; importin-8
E 100412529 BICC1; protein bicaudal C homolog 1 isoform X3 K18756 BICC1; protein bicaudal C
E 100392244 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100403489 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100410389 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100411573 heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100409067 heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100415175 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100407564 HNRNPA3; heterogeneous nuclear ribonucleoprotein A3 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100414716 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100385123 HNRNPA1; heterogeneous nuclear ribonucleoprotein A1 isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100413569 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100413454 heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100385748 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100385762 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100386652 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100895835 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 103796241 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108588388 heterogeneous nuclear ribonucleoprotein A1-like 3 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108588454 heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 108591245 heterogeneous nuclear ribonucleoprotein A1 isoform X2 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 118142886 heterogeneous nuclear ribonucleoprotein A1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 118143590 heterogeneous nuclear ribonucleoprotein A3-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 118148454 heterogeneous nuclear ribonucleoprotein A1-like isoform X1 K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 118153440 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 128928150 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 128930023 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 128932351 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 128932643 heterogeneous nuclear ribonucleoprotein A1-like K12741 HNRNPA1_3; heterogeneous nuclear ribonucleoprotein A1/A3
E 100392123 PRKACG; LOW QUALITY PROTEIN: cAMP-dependent protein kinase catalytic subunit gamma K04345 PKA; protein kinase A [EC:2.7.11.11]
E 100408115 cAMP-dependent protein kinase catalytic subunit gamma-like K04345 PKA; protein kinase A [EC:2.7.11.11]
E 100407692 PRKACB; cAMP-dependent protein kinase catalytic subunit beta isoform X1 K04345 PKA; protein kinase A [EC:2.7.11.11]
E 100400737 PRKACA; LOW QUALITY PROTEIN: cAMP-dependent protein kinase catalytic subunit alpha K04345 PKA; protein kinase A [EC:2.7.11.11]
E 100409206 cAMP-dependent protein kinase catalytic subunit gamma-like K04345 PKA; protein kinase A [EC:2.7.11.11]
E 118151333 cAMP-dependent protein kinase catalytic subunit alpha-like K04345 PKA; protein kinase A [EC:2.7.11.11]
E 100393120 LARP1; la-related protein 1 isoform X3 K18757 LARP1; la-related protein 1
E 100407405 LARP1B; la-related protein 1B isoform X1 K18757 LARP1; la-related protein 1
E 100386696 ATXN2L; ataxin-2-like protein isoform X1 K23625 ATXN2_2L; ataxin 2/2L
E 100410598 ATXN2; ataxin-2 isoform X21 K23625 ATXN2_2L; ataxin 2/2L
D P-body specific factors
E 100415186 DCP2; m7GpppN-mRNA hydrolase isoform X3 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 100397204 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 100410358 DCP1B; mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 100388253 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 100407527 LSM2; U6 snRNA-associated Sm-like protein LSm2 isoform X1 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 100389959 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 100408877 LSM4; U6 snRNA-associated Sm-like protein LSm4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 100409872 LSM5; U6 snRNA-associated Sm-like protein LSm5 isoform X1 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 100401332 LSM6; U6 snRNA-associated Sm-like protein LSm6 isoform X2 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 128928784 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 100408990 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 100413456 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
E 100394278 KLC1; kinesin light chain 1 isoform X1 K10407 KLC; kinesin light chain
E 100393453 KLC2; kinesin light chain 2 K10407 KLC; kinesin light chain
E 100385792 KLC4; kinesin light chain 4 K10407 KLC; kinesin light chain
E 100398459 KLC3; kinesin light chain 3 isoform X1 K10407 KLC; kinesin light chain
E 100385252 MYO5C; unconventional myosin-Vc isoform X1 K10357 MYO5; myosin V
E 100394767 MYO5A; unconventional myosin-Va isoform X2 K10357 MYO5; myosin V
E 100406508 MYO5B; unconventional myosin-Vb isoform X1 K10357 MYO5; myosin V
E 100404055 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 100403861 TUBA8; tubulin alpha-8 chain isoform X1 K07374 TUBA; tubulin alpha
E 100410702 tubulin alpha-4A chain-like K07374 TUBA; tubulin alpha
E 100400294 TUBA4A; tubulin alpha-4A chain isoform X3 K07374 TUBA; tubulin alpha
E 100410466 TUBAL3; tubulin alpha chain-like 3 isoform X1 K07374 TUBA; tubulin alpha
E 100392817 tubulin alpha-1A chain K07374 TUBA; tubulin alpha
E 100409161 TUBA1C; tubulin alpha-1C chain isoform X1 K07374 TUBA; tubulin alpha
E 100392213 tubulin alpha-1B chain K07374 TUBA; tubulin alpha
E 100390144 LOW QUALITY PROTEIN: tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 118147191 tubulin alpha-3 chain K07374 TUBA; tubulin alpha
E 100402805 CPEB2; LOW QUALITY PROTEIN: cytoplasmic polyadenylation element-binding protein 2 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100393658 CPEB1; cytoplasmic polyadenylation element-binding protein 1 isoform X4 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100392612 CPEB3; cytoplasmic polyadenylation element-binding protein 3 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100389966 CPEB4; cytoplasmic polyadenylation element-binding protein 4 isoform X1 K02602 CPEB; cytoplasmic polyadenylation element-binding protein
E 100394560 GEMIN5; gem-associated protein 5 isoform X1 K13133 GEMIN5; gem associated protein 5
E 100410295 TACC3; transforming acidic coiled-coil-containing protein 3 isoform X1 K14283 TACC3; transforming acidic coiled-coil-containing protein 3
E 100396225 TNRC6A; trinucleotide repeat-containing gene 6A protein isoform X4 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 100397391 TNRC6C; trinucleotide repeat-containing gene 6C protein isoform X4 K18412 TNRC6; trinucleotide repeat-containing gene 6 protein
E 100389255 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X9 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 100398024 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 100407781 CNOT3; CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 100414175 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 100390585 CNOT6L; CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 100414347 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 100415404 CNOT7; CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100394202 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100410547 GARRE1; granule associated Rac and RHOG effector protein 1 isoform X1 K26671 GARRE1; granule associated Rac and RHOG effector protein 1
E 100398360 DIS3L2; DIS3-like exonuclease 2 isoform X2 K18758 DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
E 100413819 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 100405730 PAN3; PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
E 100412192 protein BTG1-like K14443 TOB; protein Tob/BTG
E 100393479 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 100394994 BTG4; protein BTG4 isoform X1 K14443 TOB; protein Tob/BTG
E 100409458 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 100408523 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 100400853 BTG3; protein BTG3 isoform X1 K14443 TOB; protein Tob/BTG
E 100405025 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 100399016 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter isoform X2 K18728 EIF4ENIF1; eukaryotic translation initiation factor 4E transporter
E 100407719 PATL1; protein PAT1 homolog 1 isoform X2 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
E 100393915 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 100387589 EDC4; enhancer of mRNA-decapping protein 4 isoform X3 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 100402101 NANOS2; nanos homolog 2 K18760 NANOS2; protein nanos 2
E 100405226 NANOS3; nanos homolog 3 K18761 NANOS3; protein nanos 3
E 100394499 UPF2; regulator of nonsense transcripts 2 isoform X1 K14327 UPF2; regulator of nonsense transcripts 2
E 100385275 UPF3A; regulator of nonsense transcripts 3A isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 100388330 UPF3B; regulator of nonsense transcripts 3B isoform X1 K14328 UPF3; regulator of nonsense transcripts 3
E 100387049 TRIM21; E3 ubiquitin-protein ligase TRIM21 K10651 TRIM21; tripartite motif-containing protein 21 [EC:2.3.2.27]
E 100396005 TRIM71; E3 ubiquitin-protein ligase TRIM71 K12035 TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]
E 100398629 POLR2G; DNA-directed RNA polymerase II subunit RPB7 isoform X1 K03015 RPB7; DNA-directed RNA polymerase II subunit RPB7
E 100399251 EIF2AK2; interferon-induced, double-stranded RNA-activated protein kinase isoform X1 K16195 EIF2AK2; eukaryotic translation initiation factor 2-alpha kinase 2 [EC:2.7.11.1]
E 100395057 ZAR1; zygote arrest protein 1 K18762 ZAR1; zygote arrest protein 1
E 100397135 ZAR1L; protein ZAR1-like K18762 ZAR1; zygote arrest protein 1
E 100396031 YTHDF1; YTH domain-containing family protein 1 K20102 YTHDF; YTH domain-containing family protein
E 100401270 YTHDF2; YTH domain-containing family protein 2 K20102 YTHDF; YTH domain-containing family protein
E 100404954 YTHDF3; YTH domain-containing family protein 3 isoform X2 K20102 YTHDF; YTH domain-containing family protein
D Stress granule specific factors
E 100414325 TIAL1; nucleolysin TIAR isoform X1 K13201 TIA1; nucleolysin TIA-1/TIAR
E 100405306 TIA1; cytotoxic granule associated RNA binding protein TIA1 isoform X14 K13201 TIA1; nucleolysin TIA-1/TIAR
E 100389746 PABPC4L; polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 100413032 PABPC1; polyadenylate-binding protein 1 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 100395684 PABPC3; polyadenylate-binding protein 3 K13126 PABPC; polyadenylate-binding protein
E 100406206 PABPC1L; polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 100399096 PABPC4; polyadenylate-binding protein 4 isoform X1 K13126 PABPC; polyadenylate-binding protein
E 100399785 polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 100385809 PABPC5; polyadenylate-binding protein 5 K13126 PABPC; polyadenylate-binding protein
E 100403792 LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like K13126 PABPC; polyadenylate-binding protein
E 100406124 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 100411130 polyadenylate-binding protein 1-like K13126 PABPC; polyadenylate-binding protein
E 108589964 PABPC1L2B; polyadenylate-binding protein 1-like 2 K13126 PABPC; polyadenylate-binding protein
E 100410699 double-stranded RNA-binding protein Staufen homolog 2-like K17597 STAU; double-stranded RNA-binding protein Staufen
E 100409920 STAU2; double-stranded RNA-binding protein Staufen homolog 2 isoform X2 K17597 STAU; double-stranded RNA-binding protein Staufen
E 100393512 STAU1; double-stranded RNA-binding protein Staufen homolog 1 isoform X1 K17597 STAU; double-stranded RNA-binding protein Staufen
E 100399500 FXR1; RNA-binding protein FXR1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 100387469 FXR2; RNA-binding protein FXR2 K15516 FMR; fragile X mental retardation protein
E 100414871 FMR1; fragile X messenger ribonucleoprotein 1 isoform X1 K15516 FMR; fragile X mental retardation protein
E 100411875 ZBP1; Z-DNA-binding protein 1 isoform X1 K12965 ZBP1; Z-DNA binding protein 1
E 100896727 ELAVL1; ELAV-like protein 1 isoform X1 K13088 ELAVL1; ELAV-like protein 1
E 100415182 G3BP1; ras GTPase-activating protein-binding protein 1 isoform X2 K17265 G3BP1; Ras GTPase-activating protein-binding protein 1 [EC:5.6.2.5 5.6.2.3]
E 100413275 G3BP2; ras GTPase-activating protein-binding protein 2 isoform X1 K24983 G3BP2; Ras GTPase-activating protein-binding protein 2
E 100398797 EIF2A; eukaryotic translation initiation factor 2A isoform X1 K15026 EIF2A; translation initiation factor 2A
E 100399382 EIF3B; eukaryotic translation initiation factor 3 subunit B isoform X1 K03253 EIF3B; translation initiation factor 3 subunit B
E 100406173 eukaryotic initiation factor 4A-II-like K03257 EIF4A; translation initiation factor 4A
E 100388544 EIF4A1; eukaryotic initiation factor 4A-I K03257 EIF4A; translation initiation factor 4A
E 100406521 EIF4A2; eukaryotic initiation factor 4A-II isoform X1 K03257 EIF4A; translation initiation factor 4A
E 100414675 LOW QUALITY PROTEIN: eukaryotic initiation factor 4A-I-like K03257 EIF4A; translation initiation factor 4A
E 100414274 EIF4A3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 118143659 eukaryotic initiation factor 4A-III-like K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7]
E 100401147 EIF4B; eukaryotic translation initiation factor 4B isoform X1 K03258 EIF4B; translation initiation factor 4B
E 100390541 EIF4G2; eukaryotic translation initiation factor 4 gamma 2 K03260 EIF4G; translation initiation factor 4G
E 100391519 EIF4G1; eukaryotic translation initiation factor 4 gamma 1 isoform X2 K03260 EIF4G; translation initiation factor 4G
E 100399688 EIF4G3; eukaryotic translation initiation factor 4 gamma 3 isoform X1 K03260 EIF4G; translation initiation factor 4G
E 100393148 RPS6KA2; ribosomal protein S6 kinase alpha-2 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 100407933 RPS6KA1; ribosomal protein S6 kinase alpha-1 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 100407189 RPS6KA6; LOW QUALITY PROTEIN: ribosomal protein S6 kinase alpha-6 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 100403409 RPS6KA3; ribosomal protein S6 kinase alpha-3 isoform X1 K04373 RPS6KA; ribosomal protein S6 kinase alpha-1/2/3/6 [EC:2.7.11.1]
E 100394803 RACK1; receptor of activated protein C kinase 1 K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 100895688 LOW QUALITY PROTEIN: receptor of activated protein C kinase 1-like K14753 RACK1; guanine nucleotide-binding protein subunit beta-2-like 1 protein
E 100404226 TRAF2; TNF receptor-associated factor 2 K03173 TRAF2; TNF receptor-associated factor 2 [EC:2.3.2.27]
E 100399719 NXF1; nuclear RNA export factor 1 isoform X2 K14284 NXF; nuclear RNA export factor
E 100386998 nuclear RNA export factor 2-like K14284 NXF; nuclear RNA export factor
E 100414986 nuclear RNA export factor 2 isoform X1 K14284 NXF; nuclear RNA export factor
E 100397387 NXF3; nuclear RNA export factor 3 isoform X6 K14284 NXF; nuclear RNA export factor
E 103790736 nuclear RNA export factor 2 K14284 NXF; nuclear RNA export factor
E 100414028 HDAC6; LOW QUALITY PROTEIN: histone deacetylase 6 K11407 HDAC6; histone deacetylase 6 [EC:3.5.1.98]
E 100404096 TDRD3; tudor domain-containing protein 3 isoform X1 K18404 TDRD3; tudor domain-containing protein 3
E 100388098 LARP4B; la-related protein 4B isoform X1 K18763 LARP4; la-related protein 4
E 100401898 LARP4; la-related protein 4 isoform X3 K18763 LARP4; la-related protein 4
B mRNA degradation factors
C 5'-3' decay
D Decapping complex
E 100397204 DCP1A; mRNA-decapping enzyme 1A isoform X1 K12610 DCP1A; mRNA-decapping enzyme 1A [EC:3.-.-.-]
E 100410358 DCP1B; mRNA-decapping enzyme 1B isoform X1 K12611 DCP1B; mRNA-decapping enzyme 1B [EC:3.-.-.-]
E 100415186 DCP2; m7GpppN-mRNA hydrolase isoform X3 K12613 DCP2; mRNA-decapping enzyme subunit 2 [EC:3.6.1.62]
E 100408438 DDX6; probable ATP-dependent RNA helicase DDX6 K12614 DDX6; ATP-dependent RNA helicase DDX6/DHH1 [EC:5.6.2.7]
E 100393915 EDC3; enhancer of mRNA-decapping protein 3 K12615 EDC3; enhancer of mRNA-decapping protein 3
E 100387589 EDC4; enhancer of mRNA-decapping protein 4 isoform X3 K12616 EDC4; enhancer of mRNA-decapping protein 4
E 100407719 PATL1; protein PAT1 homolog 1 isoform X2 K12617 PATL1; DNA topoisomerase 2-associated protein PAT1
D Lsm complex
E 100388253 LSM1; U6 snRNA-associated Sm-like protein LSm1 K12620 LSM1; U6 snRNA-associated Sm-like protein LSm1
E 100407527 LSM2; U6 snRNA-associated Sm-like protein LSm2 isoform X1 K12621 LSM2; U6 snRNA-associated Sm-like protein LSm2
E 100389959 LSM3; U6 snRNA-associated Sm-like protein LSm3 K12622 LSM3; U6 snRNA-associated Sm-like protein LSm3
E 100408877 LSM4; U6 snRNA-associated Sm-like protein LSm4 isoform X1 K12623 LSM4; U6 snRNA-associated Sm-like protein LSm4
E 100409872 LSM5; U6 snRNA-associated Sm-like protein LSm5 isoform X1 K12624 LSM5; U6 snRNA-associated Sm-like protein LSm5
E 100401332 LSM6; U6 snRNA-associated Sm-like protein LSm6 isoform X2 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 128928784 U6 snRNA-associated Sm-like protein LSm6 K12625 LSM6; U6 snRNA-associated Sm-like protein LSm6
E 100408990 LSM7; U6 snRNA-associated Sm-like protein LSm7 K12626 LSM7; U6 snRNA-associated Sm-like protein LSm7
E 100413456 LSM8; LSM8 homolog, U6 small nuclear RNA associated K12627 LSM8; U6 snRNA-associated Sm-like protein LSm8
D 5' exonucleases
E 100412678 XRN1; 5'-3' exoribonuclease 1 isoform X7 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-]
E 100388181 XRN2; 5'-3' exoribonuclease 2 isoform X1 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-]
E 100406671 U8 snoRNA-decapping enzyme-like K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
E 100410770 NUDT16; U8 snoRNA-decapping enzyme K16855 NUDT16; U8 snoRNA-decapping enzyme [EC:3.6.1.62 3.6.1.64]
D Other 5'-3' decay factors
E 100410129 DCPS; m7GpppX diphosphatase isoform X1 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 100391093 HELZ; probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
C 3'-5' decay
D Core exosome factors
E 100402399 EXOSC1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
E 100397822 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 100394070 EXOSC3; exosome complex component RRP40 isoform X2 K03681 RRP40; exosome complex component RRP40
E 100393370 EXOSC4; exosome complex component RRP41 isoform X2 K11600 RRP41; exosome complex component RRP41
E 100407420 EXOSC5; exosome complex component RRP46 isoform X3 K12590 RRP46; exosome complex component RRP46
E 100399403 EXOSC6; exosome complex component MTR3 K12587 MTR3; exosome complex component MTR3
E 100406887 EXOSC7; exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42
E 100407072 EXOSC8; exosome complex component RRP43 K12586 RRP43; exosome complex component RRP43
E 100388650 EXOSC9; exosome complex component RRP45 K03678 RRP45; exosome complex component RRP45
D Exosome cofactors
E 100395737 DIS3; exosome complex exonuclease RRP44 isoform X1 K12585 DIS3; exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
E 100386678 DIS3L; DIS3-like exonuclease 1 isoform X1 K18681 DIS3L; DIS3-like exonuclease 1 [EC:3.1.13.-]
E 100405990 EXOSC10; exosome component 10 isoform X1 K12591 RRP6; exosome complex exonuclease RRP6 [EC:3.1.13.-]
E 100388868 C1D; nuclear nucleic acid-binding protein C1D K12592 C1D; exosome complex protein LRP1
E 100391070 MPHOSPH6; M-phase phosphoprotein 6 isoform X1 K12593 MPHOSPH6; M-phase phosphoprotein 6, animal type
E 100396369 DDX60L; LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX60-like K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
E 100410287 DDX60; probable ATP-dependent RNA helicase DDX60 isoform X1 K20103 DDX60; ATP-dependent RNA helicase DDX60 [EC:5.6.2.7]
D TRAMP complex
E 100391060 TENT4A; terminal nucleotidyltransferase 4A isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 100404009 TENT4B; terminal nucleotidyltransferase 4B isoform X1 K03514 PAPD5_7; non-canonical poly(A) RNA polymerase PAPD5/7 [EC:2.7.7.19]
E 100390677 ZCCHC7; zinc finger CCHC domain-containing protein 7 isoform X1 K12597 AIR1_2; protein AIR1/2
E 100399268 MTREX; exosome RNA helicase MTR4 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6]
D Ski complex
E 100409587 SKIC2; SKI2 subunit of superkiller complex protein isoform X2 K12599 SKI2; antiviral helicase SKI2 [EC:5.6.2.6]
E 100407035 SKIC3; SKI3 subunit of superkiller complex protein isoform X1 K12600 SKI3; superkiller protein 3
E 100415315 SKIC8; SKI8 subunit of superkiller complex protein isoform X2 K12602 WDR61; WD repeat-containing protein 61
D Ccr4-NOT complex
E 100390585 CNOT6L; CCR4-NOT transcription complex subunit 6-like isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 100414347 CNOT6; CCR4-NOT transcription complex subunit 6 isoform X1 K12603 CNOT6; CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
E 100389255 CNOT1; CCR4-NOT transcription complex subunit 1 isoform X9 K12604 CNOT1; CCR4-NOT transcription complex subunit 1
E 100398024 CNOT2; CCR4-NOT transcription complex subunit 2 isoform X1 K12605 CNOT2; CCR4-NOT transcription complex subunit 2
E 100407781 CNOT3; CCR4-NOT transcription complex subunit 3 isoform X1 K12580 CNOT3; CCR4-NOT transcription complex subunit 3
E 100414175 CNOT4; CCR4-NOT transcription complex subunit 4 isoform X2 K10643 CNOT4; CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
E 100415404 CNOT7; CCR4-NOT transcription complex subunit 7 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100394202 CNOT8; CCR4-NOT transcription complex subunit 8 isoform X1 K12581 CNOT7_8; CCR4-NOT transcription complex subunit 7/8
E 100390513 CNOT9; CCR4-NOT transcription complex subunit 9 isoform X2 K12606 RCD1; CCR4-NOT transcription complex subunit 9
E 100393129 CNOT10; CCR4-NOT transcription complex subunit 10 isoform X3 K12607 CNOT10; CCR4-NOT transcription complex subunit 10
D Pan complex
E 100413819 PAN2; PAN2-PAN3 deadenylation complex catalytic subunit PAN2 isoform X1 K12571 PAN2; PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:3.1.13.4]
E 100405730 PAN3; PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1 K12572 PAN3; PAB-dependent poly(A)-specific ribonuclease subunit 3
D Other 3'-5' decay factors
E 100394289 PARN; poly(A)-specific ribonuclease PARN isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 100388797 PNLDC1; poly(A)-specific ribonuclease PNLDC1 isoform X1 K01148 PARN; poly(A)-specific ribonuclease [EC:3.1.13.4]
E 100389011 DHX36; ATP-dependent DNA/RNA helicase DHX36 K14442 DHX36; ATP-dependent RNA helicase DHX36 [EC:5.6.2.6]
E 100412192 protein BTG1-like K14443 TOB; protein Tob/BTG
E 100393479 TOB2; protein Tob2 K14443 TOB; protein Tob/BTG
E 100394994 BTG4; protein BTG4 isoform X1 K14443 TOB; protein Tob/BTG
E 100409458 BTG2; protein BTG2 K14443 TOB; protein Tob/BTG
E 100408523 TOB1; protein Tob1 K14443 TOB; protein Tob/BTG
E 100400853 BTG3; protein BTG3 isoform X1 K14443 TOB; protein Tob/BTG
E 100405025 BTG1; protein BTG1 K14443 TOB; protein Tob/BTG
E 100410164 CSF2; granulocyte-macrophage colony-stimulating factor K05427 CSF2; granulocyte-macrophage colony-stimulating factor
E 100393251 NOCT; nocturnin K18764 NOCT; nocturnin [EC:3.1.3.108]
E 100389348 ERI1; 3'-5' exoribonuclease 1 isoform X1 K18416 THEX1; 3'-5' exoribonuclease 1 [EC:3.1.-.-]
E 100387057 ERI2; ERI1 exoribonuclease 2 isoform X1 K18417 ERI2; ERI1 exoribonuclease 2 [EC:3.1.-.-]
E 100410129 DCPS; m7GpppX diphosphatase isoform X1 K12584 DCPS; m7GpppX diphosphatase [EC:3.6.1.59]
E 100403371 PDE12; 2',5'-phosphodiesterase 12 K19612 PDE12; 2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]
E 100385776 IREB2; iron-responsive element-binding protein 2 isoform X1 K22416 IREB2; iron-responsive element-binding protein 2
E 100391093 HELZ; probable helicase with zinc finger domain isoform X1 K25168 HELZ; helicase with zinc finger domain [EC:5.6.2.-]
E 100407546 HELZ2; LOW QUALITY PROTEIN: helicase with zinc finger domain 2 K25165 HELZ2; 3'-5' exoribonuclease HELZ2 [EC:3.1.13.1 5.6.2.6]
E 100389090 NRDE2; nuclear exosome regulator NRDE2 isoform X2 K26109 NRDE2; nuclear exosome regulator NRDE2
E 100405517 SAMD4A; protein Smaug homolog 1 isoform X1 K27396 SMG; protein Smaug
E 100396522 SAMD4B; protein Smaug homolog 2 K27396 SMG; protein Smaug
E 100387306 FOCAD; focadhesin isoform X1 K27498 FOCAD; focadhesin
C Other degradation factors
D RNases
E 100391488 RNASE3; non-secretory ribonuclease K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 100389327 RNASE1; ribonuclease pancreatic K01168 RNASE1_2; pancreatic ribonuclease [EC:4.6.1.18]
E 100400198 RNASE4; ribonuclease 4 precursor K16632 RNASE4; ribonuclease 4 [EC:3.1.27.-]
E 100402265 RNASE8; ribonuclease 8 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 100401158 RNASE7; ribonuclease 8 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 100401157 RNASE6; ribonuclease K6 K01172 RNASE6_7_8; ribonuclease 6/7/8 [EC:3.1.27.-]
E 100395231 ZC3H12A; endoribonuclease ZC3H12A isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 100404920 ZC3H12C; probable ribonuclease ZC3H12C isoform X1 K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 100397011 ZC3H12B; LOW QUALITY PROTEIN: probable ribonuclease ZC3H12B K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
E 100399546 ZC3H12D; probable ribonuclease ZC3H12D K18668 ZC3H12; ribonuclease ZC3H12 [EC:3.1.-.-]
#
AProkaryotic type
B Bacterial mRNA degradation factors
C RNA degradosome components
D Ribonucreases
E 100414839 DROSHA; ribonuclease 3 isoform X1 K03685 rnc; ribonuclease III [EC:3.1.26.3]
E 100409888 REXO2; oligoribonuclease, mitochondrial isoform X2 K13288 orn; oligoribonuclease [EC:3.1.-.-]
D Helicases
D Other RNA degradosome components
E 100415373 ENO1; alpha-enolase isoform X1 K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 100409160 ENO2; gamma-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 100391942 ENO3; beta-enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 100398660 beta-enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 100400153 beta-enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 118145733 beta-enolase-like K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
E 100393231 PNPT1; polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
E 100393627 PFKL; ATP-dependent 6-phosphofructokinase, liver type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 100403074 PFKP; ATP-dependent 6-phosphofructokinase, platelet type isoform X2 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
E 100403092 PFKM; ATP-dependent 6-phosphofructokinase, muscle type isoform X1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C Other RNA degradation factors
D Chaperones
E 100406895 HSPA9; stress-70 protein, mitochondrial isoform X1 K04043 dnaK; molecular chaperone DnaK
E 100414401 LOW QUALITY PROTEIN: 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
E 103787195 HSPD1; 60 kDa heat shock protein, mitochondrial K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Others
D Bacterial Small RNA Regulators
B Archeal mRNA degradation factors
C Exosome components
D Core exosome
E 100397822 EXOSC2; exosome complex component RRP4 isoform X1 K03679 RRP4; exosome complex component RRP4
E 100402399 EXOSC1; exosome complex component CSL4 isoform X1 K07573 CSL4; exosome complex component CSL4
D Cofactors
E 100393370 EXOSC4; exosome complex component RRP41 isoform X2 K11600 RRP41; exosome complex component RRP41
E 100406887 EXOSC7; exosome complex component RRP42 isoform X1 K12589 RRP42; exosome complex component RRP42
D Others
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#
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 25, 2024