+D GENES KO
#
KEGG Orthology (KO) - Campylobacter jejuni RM1221
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cjr00010]
D CJE1706 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJE0927 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJE0700 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJE1588 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJE1590 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJE1589 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CJE0484 pgm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CJE1844 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJE0441 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJE1649 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CJE0640 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJE0641 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJE1301 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJE1719 oxidoreductase, zinc-binding dehydrogenase family K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CJE1708 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJE1594 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJE1010 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:cjr00020]
D CJE1851 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CJE0922 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJE0635 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D CJE0640 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJE0641 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJE0642 oorC; 2-oxoglutarate:acceptor oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D CJE0639 oorD; 2-oxoglutarate:acceptor oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D CJE0638 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJE0637 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJE0489 sdhB; succinate dehydrogenase, iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJE0490 sdhC; succinate dehydrogenase, C subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJE0458 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJE0459 frdB; fumarate reductase, iron-sulfur protein subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJE0457 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D CJE1556 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CJE0636 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJE0442 malate:quinone oxidoreductase, putative K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CJE1181 accC-1; acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D CJE1011 oxaloacetate decarboxylase, alpha subunit, putative K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D CJE1010 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CJE1649 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cjr00030]
D CJE1706 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJE0501 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CJE1817 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D CJE0329 tal; transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D CJE1003 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D CJE1594 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJE0996 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CJE0464 oxidoreductase, putative K06151 E1.1.99.3A; gluconate 2-dehydrogenase alpha chain [EC:1.1.99.3]
D CJE0463 conserved hypothetical protein K06152 E1.1.99.3G; gluconate 2-dehydrogenase gamma chain [EC:1.1.99.3]
D CJE0700 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJE0927 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
C 00040 Pentose and glucuronate interconversions [PATH:cjr00040]
D CJE1707 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJE0501 rpe; ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D CJE1605 capsular polysaccharide biosynthesis protein, putative K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:cjr00051]
D CJE1594 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJE1612 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CJE1605 capsular polysaccharide biosynthesis protein, putative K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D CJE0535 oxidoreductase, short chain dehydrogenase/reductase family K18333 E1.1.1.435; L-fucose dehydrogenase [EC:1.1.1.435]
D CJE0532 dihydrodipicolinate synthase, putative K26911 fucH; 2-dehydro-3-deoxy-L-fuconate aldolase [EC:4.1.2.64]
D CJE0927 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJE0700 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJE1588 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D CJE1611 wcbK; GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D CJE1003 rpiB; ribose 5-phosphate isomerase B K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:cjr00052]
D CJE1273 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJE1707 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJE1594 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
C 00053 Ascorbate and aldarate metabolism
C 00500 Starch and sucrose metabolism [PATH:cjr00500]
D CJE1707 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJE1594 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJE1706 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cjr00520]
D CJE1558 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJE0409 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D CJE0908 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CJE0945 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJE1848 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJE0612 DegT/DnrJ/EryC1/StrS aminotransferase family K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CJE1485 flmA; polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CJE1486 aminotransferase, DegT/DnrJ/EryC1/StrS family K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92]
D CJE1508 acetyltransferase, GNAT family K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D CJE1507 flagellar protein, putative K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CJE1512 neuB; N-acetylneuraminic acid synthetase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CJE1506 neuA; CMP-N-acetylneuraminic acid synthetase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CJE1263 pglF; general glycosylation pathway protein K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D CJE1264 pglE; general glycosylation pathway protein K15910 pglE; UDP-N-acetylbacillosamine transaminase [EC:2.6.1.34]
D CJE1265 pglD; general glycosylation pathway protein K15913 pglD; UDP-N-acetylbacillosamine N-acetyltransferase [EC:2.3.1.203]
D CJE1517 neuC; UDP-N-acetylglucosamine 2-epimerase K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D CJE1516 ptmC; N-acetylneuraminic acid synthetase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D CJE1520 ptmB; posttranslational flagellin modification protein B K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D CJE1594 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJE1707 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJE1273 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJE1706 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJE1611 wcbK; GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D CJE1514 aminotransferase, DegT family K13010 per; perosamine synthetase [EC:2.6.1.102]
D CJE1612 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
C 00620 Pyruvate metabolism [PATH:cjr00620]
D CJE1708 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJE1649 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CJE0640 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJE0641 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJE1719 oxidoreductase, zinc-binding dehydrogenase family K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CJE0788 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CJE0787 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJE0441 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJE0495 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJE1483 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJE1482 accC-2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJE0122 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJE1301 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJE1756 oxidoreductase, FAD-binding, iron-sulfur cluster-binding K18930 dld; D-lactate dehydrogenase
D CJE0539 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D CJE0900 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D CJE1479 NADP-dependent malic enzyme, truncation K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D CJE1181 accC-1; acetyl-CoA carboxylase, biotin carboxylase K01959 pycA; pyruvate carboxylase subunit A [EC:6.4.1.1]
D CJE1011 oxaloacetate decarboxylase, alpha subunit, putative K01960 pycB; pyruvate carboxylase subunit B [EC:6.4.1.1]
D CJE0636 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJE0442 malate:quinone oxidoreductase, putative K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D CJE1556 fumC; fumarate hydratase, class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D CJE0458 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJE0459 frdB; fumarate reductase, iron-sulfur protein subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJE0457 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D CJE1010 pckA; phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D CJE1889 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CJE0648 membrane protein, putative K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cjr00630]
D CJE1708 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJE0636 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJE1851 gltA; citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D CJE0922 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJE1347 glcD; glycolate oxidase, subunit GlcD K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D CJE1071 iron-sulfur cluster-binding domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D CJE1576 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
D CJE1368 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CJE1650 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D CJE0798 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJE0451 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJE0539 aldA; aldehyde dehydrogenase K07248 aldA; lactaldehyde dehydrogenase / glycolaldehyde dehydrogenase [EC:1.2.1.22 1.2.1.21]
D CJE1684 fdhA; formate dehydrogenase, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJE1683 fdhB; formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CJE1682 fdhC; formate dehydrogenase, cytochrome b subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CJE0881 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:cjr00640]
D CJE1708 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJE0788 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CJE0787 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJE0495 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJE1483 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJE1482 accC-2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJE0122 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJE0637 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJE0638 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJE0922 acnB; aconitate hydratase 2 K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D CJE1301 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
C 00650 Butanoate metabolism [PATH:cjr00650]
D CJE0489 sdhB; succinate dehydrogenase, iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJE0490 sdhC; succinate dehydrogenase, C subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJE0458 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJE0459 frdB; fumarate reductase, iron-sulfur protein subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJE0457 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D CJE1649 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D CJE0640 oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D CJE0641 oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D CJE0677 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJE0678 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cjr00660]
D CJE0677 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJE0678 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJE0637 sucC; succinyl-CoA synthase, beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D CJE0638 sucD; succinyl-CoA synthase, alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D CJE1887 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CJE1886 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CJE1888 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cjr00562]
D CJE0123 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D CJE1588 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cjr00190]
D CJE1750 nuoA; NADH-quinone oxidoreductase, A subunit K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D CJE1749 nuoB; NADH-quinone oxidoreductase, B subunit K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D CJE1748 nuoC; NADH-quinone oxidoreductase, C subunit K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D CJE1747 nuoD; NADH-quinone oxidoreductase, D subunit K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D CJE1746 conserved hypothetical protein K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D CJE1745 hypothetical protein K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D CJE1744 nuoG; NADH-quinone oxidoreductase, G subunit K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D CJE1743 nuoH; NADH-quinone oxidoreductase, H subunit K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D CJE1742 nuoI; NADH-quinone oxidoreductase, I subunit K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2]
D CJE1741 nuoJ; NADH-quinone oxidoreductase, J subunit K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D CJE1740 nuoK; NADH-quinone oxidoreductase, K subunit K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D CJE1739 nuoL; NADH-quinone oxidoreductase, L subunit K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D CJE1738 nuoM; NADH-quinone oxidoreductase, M subunit K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D CJE1737 nuoN; NADH-quinone oxidoreductase, N subunit K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D CJE0489 sdhB; succinate dehydrogenase, iron-sulfur protein subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D CJE0490 sdhC; succinate dehydrogenase, C subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D CJE0458 frdA; fumarate reductase, flavoprotein subunit K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12]
D CJE0459 frdB; fumarate reductase, iron-sulfur protein subunit K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12]
D CJE0457 frdC; fumarate reductase, cytochrome b subunit K25996 frdC; succinate dehydrogenase subunit C
D CJE1320 petA; ubiquinol--cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CJE1319 petB; ubiquinol--cytochrome c reductase, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJE1318 petC; ubiquinol--cytochrome c reductase, cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CJE1663 ccoN; cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CJE1662 ccoO; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CJE1661 ccoQ; cytochrome c oxidase, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CJE1660 ccoP; cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CJE0077 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CJE0078 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CJE1289 cyf; cytochrome c553 K08738 CYC; cytochrome c
D CJE0100 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CJE0102 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CJE0101 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CJE0099 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CJE0103 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CJE1338 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CJE0097 ATP synthase F0, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJE0098 ATP synthase F0, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJE1014 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CJE0741 ppa; inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D CJE1548 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJE0707 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cjr00680]
D CJE1684 fdhA; formate dehydrogenase, alpha subunit, selenocysteine-containing K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9]
D CJE1683 fdhB; formate dehydrogenase, iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit
D CJE1682 fdhC; formate dehydrogenase, cytochrome b subunit K00127 fdoI; formate dehydrogenase subunit gamma
D CJE0451 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJE1844 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJE0636 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJE0700 fbaA; fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D CJE0927 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJE0788 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D CJE0787 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJE1708 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJE0484 pgm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CJE0970 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJE0371 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJE0330 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cjr00910]
D CJE0871 napA; periplasmic nitrate reductase, large subunit K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D CJE0874 napB; periplasmic nitrate reductase, small subunit K02568 napB; nitrate reductase (cytochrome), electron transfer subunit
D CJE1546 nrfA; cytochrome c552 K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D CJE1547 nrfH; cytochrome c-type protein nrfH K15876 nrfH; cytochrome c nitrite reductase small subunit
D CJE1406 oxidoreductase, 2-nitropropane dioxygenase family K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D CJE1199 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJE0798 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJE0007 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJE0008 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CJE0288 cynT; carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cjr00920]
D CJE1781 ATP-sulfurylase family protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJE1850 cysQ; CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CJE0854 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CJE0990 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CJE1894 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cjr00061]
D CJE0495 accA; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D CJE1483 accB; acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D CJE1482 accC-2; acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D CJE0122 accD; acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D CJE0493 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CJE1493 acyl carrier protein, putative K02078 acpP; acyl carrier protein
D CJE0111 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJE1492 3-oxoacyl-(acyl-carrier-protein) synthase, putative K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJE0373 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJE0494 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJE0485 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJE0322 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJE1587 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation
D CJE1016 aas; 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:cjr00121]
D CJE0898 oxidoreductase, short chain dehydrogenase/reductase family K00076 hdhA; 7-alpha-hydroxysteroid dehydrogenase [EC:1.1.1.159]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cjr00561]
D CJE1719 oxidoreductase, zinc-binding dehydrogenase family K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D CJE0374 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CJE0406 conserved hypothetical protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJE0623 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CJE0307 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:cjr00564]
D CJE1330 gpsA; glycerol-3-phosphate dehydrogenase, NAD(P)-dependent K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D CJE0406 conserved hypothetical protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJE0623 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D CJE0307 dgkA; diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D CJE1540 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
D CJE1016 aas; 2-acylglycerophosphoethanolamine acyltransferase / acyl-acyl carrier protein synthetase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20]
D CJE1536 cdsA; phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D CJE1257 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CJE1258 phosphatidylserine decarboxylase-related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CJE0934 psd; phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D CJE1210 pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D CJE1782 pgpA; phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
C 00565 Ether lipid metabolism [PATH:cjr00565]
D CJE1540 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
D CJE1540 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00591 Linoleic acid metabolism
D CJE1540 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 00592 alpha-Linolenic acid metabolism [PATH:cjr00592]
D CJE1540 pldA; phospholipase A K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4]
C 01040 Biosynthesis of unsaturated fatty acids
D CJE0993 thioesterase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cjr00230]
D CJE1594 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJE0996 prsA; ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D CJE0189 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CJE1387 purD; phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D CJE0180 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJE1515 formyltransferase, putative K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJE1035 purL; phosphoribosylformylglycinamidine synthase II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D CJE0620 purS; phosphoribosylformylglycinamidine synthase, purS protein K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D CJE0621 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJE1700 purM; phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D CJE0802 purE; phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D CJE0619 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D CJE0023 purB-1; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CJE1033 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJE1005 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CJE0339 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJE1352 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CJE1201 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CJE0377 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJE1566 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D CJE1562 nucleotide phosphoribosyltransferase, putative K00769 gpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D CJE1385 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJE1311 guanylate kinase, putative K00942 gmk; guanylate kinase [EC:2.7.4.8]
D CJE0024 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJE0282 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CJE1408 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CJE0402 phosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CJE1372 phosphatase, Ppx/GppA family K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D CJE1671 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CJE0742 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJE0607 Hit family protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D CJE1781 ATP-sulfurylase family protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJE0815 transthyretin-like protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 00240 Pyrimidine metabolism [PATH:cjr00240]
D CJE0327 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CJE1667 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CJE1241 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CJE1329 dihydroorotase, putative K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CJE0309 pyrC; dihydroorotase, homodimeric type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D CJE0895 pyrD; dihydroorotate dehydrogenase K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D CJE0284 pyrE; orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D CJE0430 pyrF; orotidine 5`-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D CJE1410 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D CJE0377 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJE0614 maf protein, putative K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D CJE0027 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D CJE0339 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJE1478 upp; uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D CJE1484 deoxycytidine triphosphate deaminase, putative K01494 dcd; dCTP deaminase [EC:3.5.4.13]
D CJE0024 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJE0282 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D CJE0857 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D CJE0026 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CJE0920 oxidoreductase, short chain dehydrogenase/reductase family K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cjr00250]
D CJE0853 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJE0080 aspartate racemase, putative K01779 racD; aspartate racemase [EC:5.1.1.13]
D CJE0029 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CJE0082 aspA; aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1]
D CJE0767 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJE1009 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJE1671 purA; adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D CJE0023 purB-1; adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D CJE1241 pyrB; aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D CJE0007 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJE0008 gltD; glutamate synthase, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D CJE1676 bifunctional putA protein, putative K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CJE0798 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJE0327 carB; carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D CJE1667 carA; carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D CJE0621 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJE1558 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJE0189 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cjr00260]
D CJE0685 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJE1167 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJE0145 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJE0129 thrB; homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D CJE0903 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D CJE0451 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJE0484 pgm; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D CJE0970 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJE0371 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJE0330 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D CJE0920 oxidoreductase, short chain dehydrogenase/reductase family K16066 ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]
D CJE1257 pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D CJE1796 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CJE0915 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJE0398 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CJE0397 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cjr00270]
D CJE0854 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D CJE0990 cysK; cysteine synthase A K01738 cysK; cysteine synthase [EC:2.5.1.47]
D CJE1581 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CJE1335 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJE1239 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CJE0112 mtnA; MTA/SAH nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D CJE1352 conserved hypothetical protein K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D CJE1332 luxS; autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CJE0703 conserved hypothetical protein K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D CJE0685 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJE1167 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJE0145 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJE1894 metA; homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D CJE1895 metX; homoserine O-acetyltransferase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D CJE0318 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJE0853 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJE1301 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJE0636 mdh; malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D CJE1796 sdaA; L-serine ammonia-lyase K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D CJE0970 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJE0371 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cjr00280]
D CJE0318 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cjr00290]
D CJE0915 ilvA; threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D CJE1887 leuC; 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D CJE1886 leuD; 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D CJE1888 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D CJE0677 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJE0678 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJE0735 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CJE0012 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CJE0318 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJE1889 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D CJE0648 membrane protein, putative K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cjr00300]
D CJE0145 hom; homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D CJE0685 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJE1167 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJE0897 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CJE0190 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D CJE1777 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase, putative K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D CJE0278 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CJE1192 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CJE1702 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CJE0359 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D CJE1813 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJE0886 Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation
C 00220 Arginine biosynthesis [PATH:cjr00220]
D CJE1074 argF; ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D CJE0767 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJE1009 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJE0621 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJE0798 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJE0853 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJE0276 acetyltransferase, GNAT family K22477 argO; N-acetylglutamate synthase [EC:2.3.1.1]
D CJE0277 argB; acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D CJE0275 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D CJE0278 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cjr00330]
D CJE0855 speA; arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D CJE1027 peptidyl-arginine deiminase family protein K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D CJE1025 hydrolase, carbon-nitrogen family K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D CJE1688 nspC; carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D CJE1219 proC; pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D CJE1676 bifunctional putA protein, putative K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CJE0092 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CJE0662 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D CJE0853 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cjr00340]
D CJE1769 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D CJE1776 hisI; phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D CJE1773 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D CJE1772 hisH-2; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CJE1510 hisH-1; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D CJE1775 hisF-2; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CJE1509 hisF-1; imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D CJE1771 hisB; imidazoleglycerol-phosphate dehydratase/histidinol-phosphatase K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D CJE0362 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJE1770 hisD; histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism [PATH:cjr00350]
D CJE0853 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJE0362 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:cjr00360]
D CJE0853 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJE0362 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:cjr00380]
D CJE1199 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJE1576 katA; catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cjr00400]
D CJE0816 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CJE1088 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D CJE0063 aroQ; 3-dehydroquinate dehydratase, type II K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D CJE0454 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D CJE0436 aroK; shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D CJE0974 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D CJE1806 aroC; chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D CJE0394 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CJE0395 trpD; anthranilate synthase component II K13497 trpGD; anthranilate synthase/phosphoribosyltransferase [EC:4.1.3.27 2.4.2.18]
D CJE0396 trpF; N-(5'phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D CJE0606 trpC; indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D CJE0398 trpA; tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D CJE0397 trpB; tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D CJE0361 pheA; chorismate mutase/prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D CJE0125 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CJE0853 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJE0362 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cjr00410]
D CJE0341 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D CJE0342 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cjr00430]
D CJE0787 pta; phosphate acetyltransferase K13788 pta; phosphate acetyltransferase [EC:2.3.1.8]
D CJE0788 ackA; acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cjr00450]
D CJE1581 metC; cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D CJE1335 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase K00549 metE; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]
D CJE0142 trxB; thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CJE0663 pyridine nucleotide-disulphide oxidoreductase family protein K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D CJE1781 ATP-sulfurylase family protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJE1677 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CJE1569 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CJE0925 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cjr00460]
D CJE1199 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJE0029 ansA; L-asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D CJE0451 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cjr00470]
D CJE0984 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJE0889 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJE0621 purQ; phosphoribosylformylglycinamidine synthetase I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D CJE1824 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CJE0482 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJE0080 aspartate racemase, putative K01779 racD; aspartate racemase [EC:5.1.1.13]
D CJE1702 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D CJE0359 lysA; diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cjr00480]
D CJE1712 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D CJE1007 cytosol aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJE1062 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CJE0635 icd; isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:cjr00540]
D CJE0323 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CJE0127 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CJE0679 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CJE0334 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CJE0336 lpxB; lipid-A-disaccharide synthetase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CJE0902 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CJE1617 kpsF; arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CJE0433 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CJE0750 phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CJE0904 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CJE0807 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CJE1276 waaM; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CJE0306 sulfatase, putative K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CJE1609 gmhA-2; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJE1285 gmhA-1; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJE1286 hldE; D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D CJE1288 hydrolase, putative K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CJE1287 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
D CJE1610 capsular biosynthesis sugar kinase, putative K07031 hddA; D-glycero-alpha-D-manno-heptose-7-phosphate kinase [EC:2.7.1.168]
D CJE1608 capsular biosynthesis nucleotidyltransferase, putative K15669 hddC; D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase [EC:2.7.7.71]
D CJE1275 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CJE1283 waaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cjr00541]
D CJE1707 galU; UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D CJE1273 galE; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D CJE1611 wcbK; GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D CJE1612 fcl; GDP-L-fucose synthetase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D CJE1514 aminotransferase, DegT family K13010 per; perosamine synthetase [EC:2.6.1.102]
D CJE0908 glmU; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D CJE1485 flmA; polysaccharide biosynthesis protein K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D CJE1486 aminotransferase, DegT/DnrJ/EryC1/StrS family K15895 pseC; UDP-4-amino-4,6-dideoxy-L-N-acetyl-beta-L-altrosamine transaminase [EC:2.6.1.92]
D CJE1508 acetyltransferase, GNAT family K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D CJE1507 flagellar protein, putative K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D CJE1512 neuB; N-acetylneuraminic acid synthetase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D CJE1506 neuA; CMP-N-acetylneuraminic acid synthetase K15899 pseF; pseudaminic acid cytidylyltransferase [EC:2.7.7.81]
D CJE1263 pglF; general glycosylation pathway protein K15912 pglF; UDP-N-acetylglucosamine 4,6-dehydratase [EC:4.2.1.135]
D CJE0612 DegT/DnrJ/EryC1/StrS aminotransferase family K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00550 Peptidoglycan biosynthesis [PATH:cjr00550]
D CJE0945 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJE1848 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJE1198 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CJE0482 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJE1813 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJE0889 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJE0886 Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CJE0911 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CJE0198 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJE0483 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJE1183 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CJE0615 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJE0755 pbpC; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJE0629 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:cjr00552]
D CJE0198 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJE1613 capsular polysaccharide biosynthesis protein, putative K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cjr00543]
D CJE0854 cysE; serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cjr00730]
D CJE0503 thiC; thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D CJE1225 thiD; phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D CJE1190 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D CJE0291 cysteine desulfurase, putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJE1188 thiH; ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D CJE0366 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CJE1189 thiG; ThiG K03149 thiG; thiazole synthase [EC:2.8.1.10]
D CJE1224 thiE; thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CJE1187 thiamine-phosphate pyrophosphorylase, putative K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D CJE1632 thiamine-monophosphate kinase, putative K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D CJE0742 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJE0491 TenA/Thi-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
C 00740 Riboflavin metabolism [PATH:cjr00740]
D CJE1076 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJE0675 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CJE1794 riboflavin biosynthesis protein RibD, putative K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CJE0432 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D CJE1353 ribE; riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D CJE0692 riboflavin biosynthesis protein RibF, putative K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D CJE0859 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cjr00750]
D CJE0371 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJE1374 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262]
D CJE1373 pdxJ; pyridoxal phosphate biosynthetic protein PdxJ K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D CJE0903 thrC; threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cjr00760]
D CJE0281 nicotinate phosphoribosyltransferase, putative K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D CJE0339 surE; acid phosphatase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D CJE1591 nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D CJE0901 nadE; NAD+ synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D CJE1205 competence/damage-inducible domain protein K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42]
D CJE1194 NAD-dependent deacetylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D CJE0744 ATP-NAD kinase, putative K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cjr00770]
D CJE0677 ilvB; acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D CJE0678 ilvH; acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D CJE0735 ilvC; ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D CJE0012 ilvD; dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D CJE0343 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D CJE0342 panC; pantoate--beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D CJE0443 transcriptional activator, putative, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D CJE0909 coaBC; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D CJE0858 coaD; posphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D CJE1701 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D CJE1596 acpS; holo-(acyl-carrier-protein) synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D CJE0318 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJE0341 panD; aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:cjr00780]
D CJE0349 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D CJE0494 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJE0485 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJE0322 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJE1587 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CJE0350 conserved hypothetical protein K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D CJE0351 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJE0352 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CJE0353 bioD; dethiobiotin synthetase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D CJE1853 bioB; biotin synthetase K01012 bioB; biotin synthase [EC:2.8.1.6]
D CJE0094 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:cjr00790]
D CJE0187 folE; GTP cyclohydrolase I K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D CJE0805 conserved hypothetical protein TIGR00486 K22391 E3.5.4.16; GTP cyclohydrolase I [EC:3.5.4.16]
D CJE0405 folB domain protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D CJE0062 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D CJE0688 folP; dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D CJE1231 folC; folC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D CJE1076 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJE0675 ribB; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D CJE0948 pabA; para-aminobenzoate synthase glutamine amidotransferase, component II K01664 pabA; para-aminobenzoate synthetase component II [EC:2.6.1.85]
D CJE0949 pabB; para-aminobenzoate synthase glutamine amidotransferase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CJE0155 6-pyruvoyl tetrahydrobiopterin synthase, homolog K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CJE0156 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CJE0016 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CJE1892 GTP cyclohydrolase I family protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CJE0157 molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJE0302 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CJE1691 molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CJE0825 mog; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CJE1693 molybdopterin biosynthesis MoeA protein, putative K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CJE0944 molybdopterin biosynthesis MoeA protein, putative K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D CJE1539 molybdopterin-guanine dinucleotide biosynthesis protein, putative K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cjr00670]
D CJE0942 folD; folD bifunctional protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D CJE0451 glyA; serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D CJE0180 purN; phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJE1515 formyltransferase, putative K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D CJE1033 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJE0093 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJE1498 formyl transferase domain protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJE0026 thyX; thymidylate synthase, flavin-dependent K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D CJE0881 purU; formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D CJE1336 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D CJE1342 conserved hypothetical protein K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cjr00860]
D CJE0932 gltX-1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE1480 gltX-2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE0646 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D CJE0940 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CJE1075 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CJE0649 hemC; porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D CJE1223 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D CJE1379 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D CJE1072 hemN; oxygen-independent coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3]
D CJE0411 conserved hypothetical protein TIGR00701 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D CJE0610 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D CJE1785 conserved hypothetical protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cjr00130]
D CJE0160 4-hydroxybenzoate octaprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D CJE0650 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D CJE0859 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CJE0369 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D CJE1477 conserved hypothetical protein K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D CJE1560 radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D CJE0064 amidohydrolase family protein K20810 mqnX; aminodeoxyfutalosine deaminase [EC:3.5.4.40]
D CJE0112 mtnA; MTA/SAH nucleosidase K18284 K18284; adenosylhomocysteine/aminodeoxyfutalosine nucleosidase [EC:3.2.2.9 3.2.2.30]
D CJE0512 radical SAM domain protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D CJE1846 conserved hypothetical protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cjr00900]
D CJE0366 dxs; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D CJE1535 dxr; 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D CJE1779 ispD/ispF bifunctional enzyme K12506 ispDF; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase / 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:2.7.7.60 4.6.1.12]
D CJE1247 ispE; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D CJE0785 ispG; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D CJE0973 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D CJE0859 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D CJE1816 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CJE0645 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CJE0911 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D CJE1817 tkt; transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis
C 01054 Nonribosomal peptide structures [PATH:cjr01054]
D CJE0080 aspartate racemase, putative K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cjr00332]
D CJE0092 proB; glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D CJE0662 proA; gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cjr00261]
D CJE1781 ATP-sulfurylase family protein K00958 sat; sulfate adenylyltransferase [EC:2.7.7.4]
D CJE0685 aspartate kinase, monofunctional class K00928 lysC; aspartate kinase [EC:2.7.2.4]
D CJE1167 asd; aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D CJE0897 dapA; dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D CJE0190 dapB; dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cjr00521]
D CJE1594 algC; phosphomannomutase/phosphoglucomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D CJE0123 Inositol monophosphatase family protein K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis
C 00401 Novobiocin biosynthesis [PATH:cjr00401]
D CJE0125 tyrA; prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D CJE0853 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJE0362 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D CJE0394 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D CJE0111 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJE0485 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJE1587 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D CJE0493 acpP; acyl carrier protein K02078 acpP; acyl carrier protein
D CJE1493 acyl carrier protein, putative K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cjr00999]
D CJE1239 metK; S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D CJE0454 aroE; shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cjr00362]
D CJE0319 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D CJE1725 4-carboxymuconolactone decarboxylase, putative K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44]
C 00627 Aminobenzoate degradation [PATH:cjr00627]
D CJE1199 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D CJE0859 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D CJE0319 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
D CJE1199 hydrolase, carbon-nitrogen family K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D CJE0319 4-oxalocrotonate tautomerase family protein K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cjr03020]
D CJE0528 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJE0529 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJE1767 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJE1409 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cjr03010]
D CJE0972 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CJE1316 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CJE1869 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CJE1766 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CJE1858 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CJE1213 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CJE0541 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CJE1861 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CJE1652 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CJE1876 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CJE1765 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CJE0540 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CJE1764 rpsM; ribosomal protein S13/S18 K02952 RP-S13; small subunit ribosomal protein S13
D CJE1862 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CJE0964 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CJE0810 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CJE1866 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CJE1215 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CJE1871 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CJE1783 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CJE0419 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CJE0525 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CJE1872 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CJE1875 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CJE1874 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CJE1863 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CJE1860 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CJE0527 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CJE0766 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CJE0526 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CJE0524 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CJE1653 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CJE1865 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CJE1857 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CJE1868 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CJE1768 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CJE1859 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CJE0814 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CJE0295 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CJE0089 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CJE1870 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CJE1873 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CJE1864 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CJE0356 rplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CJE0090 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CJE0500 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CJE1867 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CJE0151 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CJE0375 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CJE0521 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CJE1041 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CJE0294 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CJE1763 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CJE_Cj16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJE_Cj16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJE_Cj16SC rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJE_Cj23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJE_Cj23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJE_Cj23SC rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cjr00970]
D CJE_tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJE_tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJE_tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJE_tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJE_tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJE_tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJE_tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJE_tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJE_tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CJE_tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJE_tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJE_tRNA-Cys-1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CJE_tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJE_tRNA-Arg-2 tRNA-Arg K14224 tRNA-Glu; tRNA Glu
D CJE_tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJE_tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJE_tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJE_tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJE_tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D CJE_tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJE_tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJE_tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJE_tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJE_tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJE_tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJE_tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJE_tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJE_tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJE_tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJE_tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJE_tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJE_tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CJE_tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJE_tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJE_tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJE_tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJE_tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJE_tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJE_tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CJE_tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CJE_tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJE_tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJE_tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJE_tRNA-SeC-1 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CJE0932 gltX-1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE1480 gltX-2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE1202 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CJE1331 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CJE0447 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CJE0613 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJE0743 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJE0804 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJE1369 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJE0199 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJE0438 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJE1569 selA; L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D CJE0893 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJE0925 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJE0093 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJE1498 formyl transferase domain protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D CJE0866 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJE1234 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJE1204 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJE0450 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CJE1309 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJE0647 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJE0856 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJE0976 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJE0975 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJE1407 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJE0437 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cjr03060]
D CJE1856 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CJE0522 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CJE0286 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CJE1236 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CJE1235 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CJE1237 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CJE1038 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJE1020 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJE0809 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJE_CjSRP1 sRNA K01983 ffs; SRP RNA
D CJE1340 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJE1310 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CJE0682 tatB; twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CJE0681 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CJE0943 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJE0410 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cjr04122]
D CJE0291 cysteine desulfurase, putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJE0048 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJE1805 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJE1691 molybdopterin converting factor, subunit 2 K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12]
D CJE0157 molybdenum cofactor biosynthesis protein K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D CJE1690 thiS family protein K03636 moaD; sulfur-carrier protein
D CJE0302 moaC; molybdenum cofactor biosynthesis protein MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D CJE0825 mog; molybdenum cofactor biosynthesis protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D CJE1191 thiS; thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D CJE1190 thiF; thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cjr03018]
D CJE0684 nidH; (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CJE1844 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJE1390 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CJE0734 RNB-like protein K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CJE1292 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CJE1343 HD/HDIG/KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CJE1879 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CJE0850 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJE1356 groEL; co-chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJE1548 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJE0707 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cjr03030]
D CJE0502 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJE0818 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJE1293 dnaX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJE0687 DNA polymerase III, delta prime subunit, homolog K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJE0733 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJE0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJE0667 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CJE1810 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJE1214 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CJE1808 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CJE0009 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CJE0689 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cjr03410]
D CJE0698 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CJE0081 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CJE1792 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CJE1043 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJE0305 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJE0028 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJE0689 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cjr03420]
D CJE1228 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CJE0390 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CJE0778 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CJE1382 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CJE1244 ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJE0868 ATP-dependent DNA helicase, putative K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJE0689 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cjr03430]
D CJE1196 mutS; DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D CJE1244 ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJE0868 ATP-dependent DNA helicase, putative K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJE0370 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CJE1200 exodeoxyribonuclease VII, small subunit, putative K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CJE0028 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJE1214 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CJE0818 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJE0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJE1293 dnaX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJE0733 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJE0687 DNA polymerase III, delta prime subunit, homolog K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJE0502 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJE0689 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJE0220 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
C 03440 Homologous recombination [PATH:cjr03440]
D CJE0028 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJE1214 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CJE1399 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CJE1845 recA; RecA K03553 recA; recombination protein RecA
D CJE0890 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CJE1554 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CJE1897 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CJE0514 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CJE1654 ATP-dependent DNA helicase, UvrD/REP family K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CJE0818 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJE0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJE1293 dnaX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJE0733 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJE0687 DNA polymerase III, delta prime subunit, homolog K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJE0502 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJE0782 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cjr02010]
D CJE1711 tungstate ABC transporter, periplasmic tungstate-binding protein, putative K05772 tupA; tungstate transport system substrate-binding protein
D CJE1710 tungstate ABC transporter, permease protein, putative K05773 tupB; tungstate transport system permease protein
D CJE1709 tungsten ABC transporter, ATP-binding protein, putative K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CJE0348 modA; molybdenum ABC transporter, periplasmic molybdenum-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CJE0346 modB; molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CJE0345 modC; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CJE0168 iron ABC transporter, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CJE0167 iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CJE0166 iron ABC transporter, ATP binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CJE1564 toluene tolerance protein, putative K07323 mlaC; phospholipid transport system substrate-binding protein
D CJE1820 ABC transporter, periplasmic substrate-binding protein, putative K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJE1818 ABC transporter, permease protein, putative K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJE1819 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CJE0716 phosphate ABC transporter, periplasmic phosphate-binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D CJE0717 phosphate ABC transporter, permease protein PstC, putative K02037 pstC; phosphate transport system permease protein
D CJE0718 phosphate ABC transporter, permease protein PstA, putative K02038 pstA; phosphate transport system permease protein
D CJE0719 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CJE0999 pebA; amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D CJE0998 amino acid ABC transporter, permease protein PEB1 K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJE0997 amino acid ABC transporter, permease protein PEB1 K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJE1000 pebC; amino acid ABC transporter, ATP-binding protein PEB1 K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CJE0834 cjaC; CjaC K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CJE0980 amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D CJE0981 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CJE1162 high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJE1163 high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJE1161 livH; high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CJE1160 livM; high affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CJE1159 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CJE1158 livF; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CJE0863 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CJE0861 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CJE0862 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CJE1334 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CJE0864 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D CJE0865 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CJE0138 cation ABC transporter, periplasmic cation-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CJE0136 cation ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CJE0137 cation ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CJE1619 kpsE; capsular polysaccharide ABC transporter K10107 kpsE; capsular polysaccharide transport system permease protein
D CJE1621 kpsM; capsular polysaccharide ABC transporter, permease protein K09688 kpsM; capsular polysaccharide transport system permease protein
D CJE1620 kpsT; capsular polysaccharide ABC transporter, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CJE0913 membrane protein, putative K07091 lptF; lipopolysaccharide export system permease protein
D CJE0358 membrane protein, putative K11720 lptG; lipopolysaccharide export system permease protein
D CJE0770 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CJE1412 cell division protein FtsX, putative K09811 ftsX; cell division transport system permease protein
D CJE1413 lolD; lipoprotein releasing system ATP-binding protein LolD K09812 ftsE; cell division transport system ATP-binding protein
D CJE0894 ABC transporter, ATP-binding protein/permease MsbA, putative K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CJE0710 macrolide-specific efflux protein macB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CJE1758 cyclic peptide ABC transporter, ATP-binding protein/permease K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:cjr03070]
D CJE1647 ctsD; general secretory pathway protein D K02453 gspD; general secretion pathway protein D
D CJE1643 ctsF; general secretory pathway protein F K02455 gspF; general secretion pathway protein F
D CJE1532 ctsG; transformation system protein K02456 gspG; general secretion pathway protein G
D CJE0781 hypothetical protein K02456 gspG; general secretion pathway protein G
D CJE1644 ctsE; general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CJE1236 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CJE1235 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CJE0522 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CJE0286 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CJE1856 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CJE1237 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CJE1038 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJE1020 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJE1340 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJE0809 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJE1310 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CJE0682 tatB; twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CJE0681 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
D CJE1141 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cjr02020]
D CJE0716 phosphate ABC transporter, periplasmic phosphate-binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D CJE1363 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D CJE1528 flaA; flagellin subunit protein FlaA K02406 fliC; flagellin
D CJE1526 flaB; flagellin subunit protein FlaB K02406 fliC; flagellin
D CJE0820 flaC; flagellin subunit protein FlaC K02406 fliC; flagellin
D CJE0058 fliA; RNA polymerase sigma factor, sigma-F K02405 fliA; RNA polymerase sigma factor FliA
D CJE0382 chemotaxis protein MotA, putative K02556 motA; chemotaxis protein MotA
D CJE0776 potassium-transporting ATPase, C subunit, putative K01548 kdpC; potassium-transporting ATPase KdpC subunit
D CJE0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJE0772 dcuB; anaerobic C4-dicarboxylate membrane transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CJE1246 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
D CJE1559 GlnD family protein K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D CJE0798 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJE1326 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJE0771 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CJE1401 hydC; quinone-reactive Ni/Fe hydrogenase, cytochrome b subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D CJE1001 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJE0314 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE1253 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE1679 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0312 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0019 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0140 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE1735 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0331 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CJE0332 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJE1261 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJE1002 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJE0333 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CJE1320 petA; ubiquinol--cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
D CJE1319 petB; ubiquinol--cytochrome c reductase, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJE1318 petC; ubiquinol--cytochrome c reductase, cytochrome c1 subunit K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit
D CJE1289 cyf; cytochrome c553 K08738 CYC; cytochrome c
D CJE1663 ccoN; cytochrome c oxidase, cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D CJE1662 ccoO; cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D CJE1661 ccoQ; cytochrome c oxidase, cbb3-type, subunit IV K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV
D CJE1660 ccoP; cytochrome c oxidase, cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III
D CJE0077 cydA; cytochrome d ubiquinol oxidase, subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D CJE0078 cydB; cytochrome d ubiquinol oxidase, subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7]
D CJE1394 low molecular weight phosphotyrosine protein phosphatase family protein K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D CJE1320 petA; ubiquinol--cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cjr02024]
D CJE1332 luxS; autoinducer-2 production protein LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D CJE0394 trpE; anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D CJE0816 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D CJE0827 ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CJE0831 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CJE0830 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CJE0832 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CJE1162 high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJE1163 high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJE1161 livH; high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CJE1160 livM; high affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CJE1159 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CJE1158 livF; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CJE1076 ribA; GTP cyclohydrolase II K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D CJE1794 riboflavin biosynthesis protein RibD, putative K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D CJE0414 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJE1038 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJE0522 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CJE0286 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CJE1856 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CJE1237 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CJE1020 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJE1340 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJE0809 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cjr02030]
D CJE0314 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE1253 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE1679 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0312 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0019 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0140 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE1735 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0332 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJE0331 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CJE1261 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJE1002 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJE0333 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CJE1001 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJE0364 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CJE0057 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJE0056 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CJE0400 fliN; flagellar switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJE0382 chemotaxis protein MotA, putative K02556 motA; chemotaxis protein MotA
D CJE0381 chemotaxis protein MotB, putative K02557 motB; chemotaxis protein MotB
D CJE0702 chemotaxis protein MotB, putative K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cjr02040]
D CJE0630 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJE0363 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CJE0364 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CJE0365 flagellar assembly protein FliH, putative K02411 fliH; flagellar assembly protein FliH
D CJE0188 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJE0040 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D CJE1595 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D CJE0057 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJE0056 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CJE0400 fliN; flagellar switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJE0907 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CJE1847 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CJE1313 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJE0962 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJE0380 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CJE0860 flagellar basal-body P-ring formation protein FlgA, putative K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CJE0632 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CJE0631 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CJE0041 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CJE0042 flgE-1; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D CJE1896 flgE-2; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D CJE0796 flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CJE0797 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CJE0786 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D CJE1636 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D CJE1637 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CJE1640 flagellar hook-associated protein FlgK, putative K02396 flgK; flagellar hook-associated protein 1
D CJE0966 flagellin family protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D CJE1170 lipoprotein, putative K09860 flgP; outer membrane protein FlgP
D CJE1169 hypothetical protein K24346 flgQ; flagellar motility protein FlgQ
D CJE1528 flaA; flagellin subunit protein FlaA K02406 fliC; flagellin
D CJE1526 flaB; flagellin subunit protein FlaB K02406 fliC; flagellin
D CJE0820 flaC; flagellin subunit protein FlaC K02406 fliC; flagellin
D CJE0652 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D CJE0653 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CJE0382 chemotaxis protein MotA, putative K02556 motA; chemotaxis protein MotA
D CJE0381 chemotaxis protein MotB, putative K02557 motB; chemotaxis protein MotB
D CJE0702 chemotaxis protein MotB, putative K02557 motB; chemotaxis protein MotB
D CJE1081 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CJE0771 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CJE0058 fliA; RNA polymerase sigma factor, sigma-F K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D CJE1844 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cjr01501]
D CJE0416 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJE0415 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJE0414 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJE0615 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJE0755 pbpC; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJE0629 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJE0344 beta-lactamase K19210 blaOXA-61; beta-lactamase class D OXA-61 [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:cjr01502]
D CJE0889 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJE0984 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJE0886 Mur ligase family protein K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D CJE0483 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJE1183 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cjr01503]
D CJE0306 sulfatase, putative K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CJE1405 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJE1363 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D CJE0416 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJE0415 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJE0323 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cjr01000]
C 01001 Protein kinases [BR:cjr01001]
D CJE1361 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJE1398 racS; sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJE1357 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJE0884 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CJE0332 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cjr01009]
D CJE0625 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CJE0330 serB; phosphoserine phosphatase SerB K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cjr01002]
D CJE0410 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D CJE0912 peptidase, A24 family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CJE1400 hydD; hydrogenase maturation protease HydD K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D CJE1385 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D CJE1825 nlpC; lipoprotein NlpC K13695 nlpC; probable lipoprotein NlpC
D CJE0189 purF; amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D CJE0007 gltB; glutamate synthase, large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D CJE1558 glmS; glucosamine--fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D CJE0978 thiJ; 4-methyl-5(B-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme K03152 thiJ; protein deglycase [EC:3.5.1.124]
D CJE1242 pepF; oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D CJE1007 cytosol aminopeptidase family protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D CJE1192 dapE; succinyl-diaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
D CJE1062 pepD; aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D CJE1067 hipO; hippurate hydrolase K01451 hipO; hippurate hydrolase [EC:3.5.1.32]
D CJE1823 map; methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D CJE0756 peptidase, M24 family K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D CJE1259 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJE1085 cell division protein FtsH, putative K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJE1211 membrane-associated zinc metalloprotease, putative K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D CJE1363 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D CJE0185 clpP; ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D CJE1216 lon; ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D CJE0943 lepB; signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D CJE0618 ctpA; carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D CJE0065 sppA; signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D CJE0765 hslV; ATP-dependent protease HslVU, HslV subunit K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D CJE0801 peptidase, U32 family K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cjr01003]
D CJE0615 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJE1267 pglA; general glycosylation pathway protein K15914 pglA; N,N'-diacetylbacillosaminyl-diphospho-undecaprenol alpha-1,3-N-acetylgalactosaminyltransferase [EC:2.4.1.290]
D CJE1271 pglH; general glycosylation pathway protein K17249 pglH; GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase [EC:2.4.1.292]
D CJE1270 pglI; general glycosylation pathway protein K17250 pglI; GalNAc5-diNAcBac-PP-undecaprenol beta-1,3-glucosyltransferase [EC:2.4.1.293]
D CJE1269 pglJ; general glycosylation pathway protein K17248 pglJ; N-acetylgalactosamine-N,N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase [EC:2.4.1.291]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cjr01005]
D CJE0323 lpxA; acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D CJE0336 lpxB; lipid-A-disaccharide synthetase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D CJE0127 lpxC; UDP-3-0-acyl N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D CJE0679 lpxD; UDP-3-O-(R-3-hydroxymyristoyl)-glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D CJE0334 conserved hypothetical protein K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D CJE0902 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D CJE1276 waaM; lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D CJE0807 waaA; 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D CJE0306 sulfatase, putative K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43]
D CJE0433 kdsA; 3-deoxy-8-phosphooctulonate synthase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D CJE0904 kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D CJE0750 phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D CJE1617 kpsF; arabinose-5-phosphate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D CJE1275 waaC; lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D CJE1283 waaF; ADP-heptose--LPS heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D CJE1609 gmhA-2; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJE1285 gmhA-1; phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D CJE1288 hydrolase, putative K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D CJE1286 hldE; D,D-heptose 1-phosphate adenosyltransferase/7-phosphate kinase K03272 gmhC; D-beta-D-heptose 7-phosphate kinase / D-beta-D-heptose 1-phosphate adenosyltransferase [EC:2.7.1.167 2.7.7.70]
D CJE1287 waaD; ADP-L-glycero-D-mannoheptose-6-epimerase K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cjr01011]
D CJE0945 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D CJE1848 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D CJE1198 murC; UDP-N-acetylmuramate--alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D CJE0482 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D CJE1813 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D CJE0889 ddlA; D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D CJE0984 alr; alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D CJE1824 murI; glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D CJE0483 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D CJE1183 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D CJE0198 undecaprenol kinase, putative K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D CJE0892 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CJE0615 pbpA; penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D CJE0755 pbpC; penicillin-binding protein 2 K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D CJE0629 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJE0930 soluble lytic murein transglycosylase, putative K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJE0748 membrane-bound lytic murein transglycosylase D, putative K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D CJE0633 conserved hypothetical protein K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D CJE0749 rlpA; rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D CJE1405 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cjr01004]
D CJE0111 fabD; malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D CJE1492 3-oxoacyl-(acyl-carrier-protein) synthase, putative K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJE0373 fabH; 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D CJE0494 fabF; 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D CJE0485 fabG; 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D CJE0322 fabZ; beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D CJE1587 fabI; enoyl-(acyl-carrier-protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D CJE0993 thioesterase family protein K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-]
D CJE1708 acs; acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D CJE0374 plsX; fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D CJE0406 conserved hypothetical protein TIGR00023 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D CJE0623 1-acyl-sn-glycerol-3-phosphate acyltransferase, putative K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cjr01008]
D CJE0080 aspartate racemase, putative K01779 racD; aspartate racemase [EC:5.1.1.13]
C 01006 Prenyltransferases [BR:cjr01006]
D CJE1816 ispA; geranyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D CJE0645 polyprenyl synthetase family protein K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D CJE0911 uppS; undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D CJE0161 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CJE0160 4-hydroxybenzoate octaprenyltransferase, putative K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:cjr01007]
D CJE0932 gltX-1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE1480 gltX-2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE1407 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJE0437 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CJE0893 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJE1309 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJE0925 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJE1204 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJE0866 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJE1234 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJE0450 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CJE0743 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJE0856 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJE0804 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJE1369 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJE0438 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJE0647 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJE0199 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJE0613 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJE0976 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJE0975 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJE0853 aspC; aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D CJE0146 aminotransferase, classes I and II K14261 alaC; alanine-synthesizing transaminase [EC:2.6.1.-]
D CJE0362 hisC; histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D CJE0351 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D CJE0278 argD; acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D CJE0352 bioA; adenosylmethionine--8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D CJE0940 hemL; glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D CJE0318 ilvE; branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D CJE0949 pabB; para-aminobenzoate synthase glutamine amidotransferase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38]
D CJE0371 serC; phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D CJE0612 DegT/DnrJ/EryC1/StrS aminotransferase family K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D CJE1514 aminotransferase, DegT family K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cjr00194]
D CJE0103 atpC; ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D CJE0102 atpD; ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D CJE0101 atpG; ATP synthase F1, gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D CJE0100 atpA; ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D CJE0099 atpH; ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D CJE0097 ATP synthase F0, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJE0098 ATP synthase F0, B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D CJE1014 atpE; ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D CJE1338 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cjr03000]
D CJE0417 transcriptional regulator, TetR family K18992 cmeR; TetR/AcrR family transcriptional regulator, cmeABC operon repressor
D CJE1365 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D CJE0449 fur; ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D CJE0367 transcriptional regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D CJE1731 arsR; arsenical resistance operon repressor K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D CJE0094 biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D CJE1680 ModE repressor domain protein K02019 modE; molybdate transport system regulatory protein
D CJE1676 bifunctional putA protein, putative K13821 putA; RHH-type transcriptional regulator, proline utilization regulon repressor / proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.5.2 1.2.1.88]
D CJE1360 conserved hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D CJE0617 conserved hypothetical protein K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D CJE0096 chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJE0848 hrcA; heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D CJE0491 TenA/Thi-4 family protein K03707 tenA; thiaminase (transcriptional activator TenA) [EC:3.5.99.2]
D CJE0120 dnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
C 03021 Transcription machinery [BR:cjr03021]
D CJE1767 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJE0528 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJE0529 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJE1409 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CJE1081 rpoD; RNA polymerase sigma factor RpoD K03086 rpoD; RNA polymerase primary sigma factor
D CJE0771 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D CJE0058 fliA; RNA polymerase sigma factor, sigma-F K02405 fliA; RNA polymerase sigma factor FliA
D CJE0510 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CJE0431 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CJE0523 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CJE0120 dnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D CJE0335 greA; transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D CJE1292 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cjr03019]
D CJE1807 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJE1879 metallo-beta-lactamase family protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D CJE1343 HD/HDIG/KH domain protein K18682 rny; ribonucrease Y [EC:3.1.-.-]
D CJE0734 RNB-like protein K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CJE1844 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJE1390 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D CJE1292 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho
D CJE0850 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJE1356 groEL; co-chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJE1548 ppk; polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D CJE0707 conserved hypothetical protein K22468 ppk2; polyphosphate kinase [EC:2.7.4.34]
D CJE0684 nidH; (di)nucleoside polyphosphate hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
D CJE1246 csrA; carbon storage regulator K03563 csrA; carbon storage regulator
C 03041 Spliceosome
C 03011 Ribosome [BR:cjr03011]
D CJE0972 rpsA; ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D CJE1316 rpsB; ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D CJE1869 rpsC; ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D CJE1766 rpsD; ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D CJE1858 rpsE; ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D CJE1213 rpsF; ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D CJE0541 rpsG; ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D CJE1861 rpsH; ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D CJE1652 rpsI; ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D CJE1876 rpsJ; ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D CJE1765 rpsK; ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D CJE0540 rpsL; ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D CJE1764 rpsM; ribosomal protein S13/S18 K02952 RP-S13; small subunit ribosomal protein S13
D CJE1862 rpsN; ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D CJE0964 rpsO; ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D CJE0810 rpsP; ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D CJE1866 rpsQ; ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D CJE1215 rpsR; ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D CJE1871 rpsS; ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D CJE1783 rpsT; ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D CJE0419 rpsU; ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D CJE0525 rplA; ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D CJE1872 rplB; ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D CJE1875 rplC; ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D CJE1874 rplD; ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D CJE1863 rplE; ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D CJE1860 rplF; ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D CJE0766 rplI; ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D CJE0526 rplJ; ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D CJE0524 rplK; ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D CJE0527 rplL; ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D CJE1653 rplM; ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D CJE1865 rplN; ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D CJE1857 rplO; ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D CJE1868 rplP; ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D CJE1768 rplQ; ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D CJE1859 rplR; ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D CJE0814 rplS; ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D CJE0295 rplT; ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D CJE0089 rplU; ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D CJE1870 rplV; ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D CJE1873 rplW; ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D CJE1864 rplX; ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D CJE0090 rpmA; ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D CJE0500 rpmB; ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D CJE1867 rpmC; ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D CJE0151 rpmE; ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D CJE0375 rpmF; ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D CJE0521 rpmG; ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33
D CJE1041 rpmH; ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D CJE0294 rpmI; ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D CJE1763 rpmJ; ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D CJE0356 rplY; ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D CJE_Cj16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJE_Cj16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJE_Cj16SC rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJE_Cj23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJE_Cj23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJE_Cj23SC rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cjr03009]
D CJE1807 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJE0763 era; GTP-binding protein Era K03595 era; GTPase
D CJE0091 GTP-binding protein, GTP1/Obg family K03979 obgE; GTPase [EC:3.6.5.-]
D CJE0120 dnaK suppressor protein, putative K06204 dksA; RNA polymerase-binding transcription factor
D CJE0510 nusA; transcription termination factor NusA K02600 nusA; transcription termination/antitermination protein NusA
D CJE0431 nusB; transcription antitermination factor NusB K03625 nusB; transcription antitermination protein NusB
D CJE0523 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
D CJE1880 ksgA; dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D CJE0152 conserved hypothetical protein TIGR00046 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D CJE1077 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CJE0792 mraW; S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D CJE0150 tetrapyrrole methylase family protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D CJE0691 tlyA; hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D CJE0149 RNA methyltransferase, TrmH family K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D CJE0121 conserved hypothetical protein K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D CJE1882 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D CJE1878 RNA pseudouridylate synthase family protein K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D CJE1416 ribosomal large subunit pseudouridine synthases, RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJE0022 RNA pseudouridylate synthase family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJE0808 RNA pseudouridylate synthase family protein K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D CJE1497 acetyltransferase, GNAT family K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D CJE0812 rimM; 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D CJE1627 yliG; MiaB-like tRNA modifying enzyme YliG, TIGR01125 K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D CJE1260 ribosomal protein L11 methyltransferase, putative K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D CJE0738 conserved hypothetical protein TIGR00250 K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D CJE0435 GTPase family protein K03977 engA; GTPase
D CJE1408 RelA/SpoT family protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D CJE0132 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D CJE0133 conserved hypothetical protein K09748 rimP; ribosome maturation factor RimP
D CJE1592 conserved hypothetical protein K09710 ybeB; ribosome-associated protein
D CJE0116 conserved hypothetical protein TIGR00043 K07042 ybeY; probable rRNA maturation factor
D CJE1008 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
C 03016 Transfer RNA biogenesis [BR:cjr03016]
D CJE0880 polyA polymerase family protein K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D CJE0932 gltX-1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE1480 gltX-2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE0647 proS; prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D CJE1204 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D CJE1234 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJE0925 metS; methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D CJE1309 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJE0450 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D CJE0743 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJE0613 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D CJE0199 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D CJE0438 serS; seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D CJE0893 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D CJE0866 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D CJE0856 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D CJE0976 pheS; phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D CJE0975 pheT; phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D CJE1407 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJE0437 trpS; tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D CJE0977 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CJE1414 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D CJE0914 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D CJE1245 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D CJE1631 tRNA pseudouridine synthase D, putative K06176 truD; tRNA pseudouridine13 synthase [EC:5.4.99.27]
D CJE0291 cysteine desulfurase, putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJE0161 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D CJE1036 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D CJE1322 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CJE1677 selD; selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D CJE1850 cysQ; CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D CJE1040 rnpA; ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D CJE_CjrnpB1 sRNA K01978 rnpB; M1 RNA
D CJE0804 glyQ; glycyl-tRNA synthetase, alpha subunit K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D CJE1369 glyS; glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D CJE0118 dusB; tRNA-dihydrouridine synthase B K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D CJE0508 miaB; tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D CJE0693 methyltransferase, putative K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D CJE1058 methyltransferase, putative K15257 cmoB; tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
D CJE0918 trmA; tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35]
D CJE0813 trmD; tRNA (guanine-N1)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D CJE0983 RNA methyltransferase, TrmH family K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D CJE0603 conserved hypothetical protein K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D CJE0048 trmU; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJE1805 conserved hypothetical protein K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D CJE0113 PP-loop family protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D CJE1404 oxidoreductase, FAD-dependent K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-]
D CJE0680 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D CJE0016 ExsB K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D CJE0155 6-pyruvoyl tetrahydrobiopterin synthase, homolog K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D CJE0156 radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D CJE1892 GTP cyclohydrolase I family protein K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D CJE0321 conserved hypothetical protein K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D CJE0608 GTP-binding protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D CJE1090 tgt; queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D CJE1626 PP-loop family protein K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D CJE0128 conserved hypothetical protein K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D CJE1533 gcp; O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D CJE0769 conserved hypothetical protein TIGR00150 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D CJE0340 thiF family protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D CJE0734 RNB-like protein K12573 rnr; ribonuclease R [EC:3.1.13.1]
D CJE1390 pnp; polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cjr03012]
D CJE0131 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CJE0200 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CJE1315 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CJE0520 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CJE0542 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CJE1570 selB; selenocysteine-specific elongation factor K03833 selB; selenocysteine-specific elongation factor
D CJE1784 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D CJE0285 frr; ribosome recycling factor K02838 frr; ribosome recycling factor
D CJE0822 modification methylase, HemK family K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D CJE0357 pth; peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D CJE1762 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D CJE0655 efp; translation elongation factor P K02356 efp; elongation factor P
D CJE1628 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:cjr03110]
D CJE1251 clpA; ATP-dependent Clp protease, ATP-binding subunit ClpA K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D CJE0616 clpB; ATP-dependent chaperone protein ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D CJE0324 clpX; ATP-dependent Clp protease, ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D CJE0764 hslU; heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D CJE0625 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CJE0850 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJE1356 groEL; co-chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJE1396 dnaJ-2; co-chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CJE1178 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D CJE1364 dnaJ-1; co-chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein
D CJE1034 DnaJ domain protein K05801 djlA; DnaJ like chaperone protein
D CJE0849 grpE; co-chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE
D CJE1355 groES; chaperonin GroES K04078 groES; chaperonin GroES
D CJE1363 htrA; protease DO K04771 degP; serine protease Do [EC:3.4.21.107]
D CJE1259 ftsH; cell division protein FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJE1085 cell division protein FtsH, putative K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D CJE1338 atpB; ATP synthase F0, A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D CJE0987 conserved hypothetical protein K09796 pccA; periplasmic copper chaperone A
D CJE0730 hypA; hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D CJE0726 hypB; hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D CJE1305 ppiB; peptidyl-prolyl cis-trans isomerase B K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D CJE0793 peptidyl-prolyl cis-trans isomerase D, homolog K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D CJE0110 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8]
D CJE0699 major antigenic peptide PEB4 K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D CJE0143 trx; thioredoxin K03671 TXN; thioredoxin
D CJE1571 conserved hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJE0706 dsbD; thiol:disulfide interchange protein DsbD K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16]
C 04131 Membrane trafficking [BR:cjr04131]
D CJE0377 ndk; nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D CJE1590 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJE0441 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJE0625 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:cjr04121]
C 03051 Proteasome [BR:cjr03051]
D CJE0625 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cjr03032]
D CJE1808 rnhA; RNase H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D CJE0991 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CJE0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJE0667 dnaB; replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D CJE1810 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D CJE1214 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CJE0818 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJE0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJE0733 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJE0687 DNA polymerase III, delta prime subunit, homolog K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJE0502 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJE1293 dnaX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJE0009 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D CJE0689 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJE0220 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CJE1171 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CJE0003 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CJE1854 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cjr03036]
D CJE1807 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D CJE0991 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CJE1364 dnaJ-1; co-chaperone protein DnaJ K05516 cbpA; curved DNA-binding protein
D CJE0001 dnaA; chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D CJE1705 bacterioferritin, putative K04047 dps; starvation-inducible DNA-binding protein
D CJE0794 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CJE1413 lolD; lipoprotein releasing system ATP-binding protein LolD K09812 ftsE; cell division transport system ATP-binding protein
D CJE0629 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D CJE0965 cell division protein FtsK, putative K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D CJE1182 cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D CJE1412 cell division protein FtsX, putative K09811 ftsX; cell division transport system permease protein
D CJE0795 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJE1405 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D CJE0416 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJE0325 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CJE0326 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D CJE1417 rod shape-determining protein RodA, putative K05837 rodA; rod shape determining protein RodA
D CJE0095 chromosome partitioning protein, ParA family K03496 parA; chromosome partitioning protein
D CJE0096 chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D CJE1322 gidA; glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D CJE1077 gidB; methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D CJE0950 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CJE1094 site-specific recombinase, phage integrase family K04763 xerD; integrase/recombinase XerD
D CJE1778 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CJE1723 MloA protein, putative K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108]
D CJE0753 GTP-binding protein K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cjr03400]
D CJE0923 ogt; methylated-DNA--protein-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D CJE0081 ung; uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D CJE1792 mutY; A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D CJE0698 nth; endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D CJE1043 conserved hypothetical protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D CJE0305 xth; exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D CJE0028 recJ; single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D CJE0689 ligA; DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D CJE0390 uvrA; excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D CJE0778 uvrB; excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D CJE1382 uvrC; excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D CJE1244 ATP-dependent DNA helicase, UvrD/REP family K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJE0868 ATP-dependent DNA helicase, putative K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D CJE0528 rpoB; DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D CJE0529 rpoC; DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D CJE1767 rpoA; DNA-directed RNA polymerase, alpha subunit K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D CJE1409 rpoZ; DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D CJE1228 mfd; transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D CJE1196 mutS; DNA mismatch repair protein K07456 mutS2; DNA mismatch repair protein MutS2
D CJE0370 xseA; exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D CJE1200 exodeoxyribonuclease VII, small subunit, putative K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D CJE0818 dnaE; DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D CJE0002 dnaN; DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D CJE0733 conserved hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D CJE0687 DNA polymerase III, delta prime subunit, homolog K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D CJE0502 exonuclease, DNA polymerase III, epsilon subunit family K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D CJE1293 dnaX; DNA polymerase III, gamma/tau subunits K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D CJE1214 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CJE0220 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CJE1654 ATP-dependent DNA helicase, UvrD/REP family K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5]
D CJE1845 recA; RecA K03553 recA; recombination protein RecA
D CJE0890 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D CJE1554 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D CJE1897 ruvC; crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D CJE0782 priA; primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D CJE0590 hypothetical protein K03546 sbcC; DNA repair protein SbcC/Rad50
D CJE1339 radA; DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D CJE0514 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D CJE1399 recR; recombination protein RecR K06187 recR; recombination protein RecR
D CJE0745 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D CJE1695 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D CJE1171 gyrA; DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D CJE0003 gyrB; DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D CJE1854 topA; DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D CJE0991 hup; DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D CJE0024 nrdA; ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D CJE0282 nrdB; ribonucleoside-diphosphate reductase, beta subunit K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:cjr03029]
D CJE1319 petB; ubiquinol--cytochrome c reductase, cytochrome b subunit K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit
D CJE0131 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D CJE0200 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D CJE1315 tsf; translation elongation factor Ts K02357 tsf; elongation factor Ts
D CJE0520 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CJE0542 fusA; translation elongation factor G K02355 fusA; elongation factor G
D CJE0763 era; GTP-binding protein Era K03595 era; GTPase
D CJE1407 tyrS; tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D CJE1234 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D CJE0743 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D CJE1309 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D CJE1202 gatA; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D CJE1331 gatB; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D CJE0447 gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D CJE0566 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D CJE0697 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D CJE1441 DNA/RNA non-specific endonuclease K01173 ENDOG; endonuclease G, mitochondrial
D CJE1214 ssb; single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D CJE0124 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D CJE0850 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJE0849 grpE; co-chaperone protein GrpE K03687 GRPE; molecular chaperone GrpE
D CJE1356 groEL; co-chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJE1355 groES; chaperonin GroES K04078 groES; chaperonin GroES
D CJE1396 dnaJ-2; co-chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D CJE1178 DnaJ domain protein K03686 dnaJ; molecular chaperone DnaJ
D CJE0291 cysteine desulfurase, putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D CJE1778 mrp; ATP/GTP-binding protein K03593 mrp; ATP-binding protein involved in chromosome partitioning
D CJE1038 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJE0989 SCO1/SenC family protein K07152 SCO1; protein SCO1
D CJE0625 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cjr02000]
D CJE0894 ABC transporter, ATP-binding protein/permease MsbA, putative K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D CJE1272 wlaB; ABC transporter, ATP-binding/permease protein K24846 pglK; ATP-binding cassette, subfamily B, bacterial PglK [EC:7.5.2.-]
D CJE0710 macrolide-specific efflux protein macB K05685 macB; macrolide transport system ATP-binding/permease protein [EC:7.6.2.-]
D CJE1758 cyclic peptide ABC transporter, ATP-binding protein/permease K06159 yojI; multidrug/microcin transport system ATP-binding/permease protein
D CJE0967 ABC transporter, ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D CJE0348 modA; molybdenum ABC transporter, periplasmic molybdenum-binding protein K02020 modA; molybdate transport system substrate-binding protein
D CJE0346 modB; molybdenum ABC transporter, permease protein K02018 modB; molybdate transport system permease protein
D CJE0345 modC; molybdenum ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D CJE1711 tungstate ABC transporter, periplasmic tungstate-binding protein, putative K05772 tupA; tungstate transport system substrate-binding protein
D CJE1710 tungstate ABC transporter, permease protein, putative K05773 tupB; tungstate transport system permease protein
D CJE1709 tungsten ABC transporter, ATP-binding protein, putative K06857 tupC; tungstate transport system ATP-binding protein [EC:7.3.2.6]
D CJE0168 iron ABC transporter, periplasmic iron-binding protein K02012 afuA; iron(III) transport system substrate-binding protein
D CJE0167 iron ABC transporter, permease protein K02011 afuB; iron(III) transport system permease protein
D CJE0166 iron ABC transporter, ATP binding subunit K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D CJE0827 ABC transporter, periplasmic substrate-binding protein K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D CJE0831 ABC transporter, permease protein K02053 ABC.SP.P; putative spermidine/putrescine transport system permease protein
D CJE0830 ABC transporter, permease protein K02054 ABC.SP.P1; putative spermidine/putrescine transport system permease protein
D CJE0832 ABC transporter, ATP-binding protein K02052 ABC.SP.A; putative spermidine/putrescine transport system ATP-binding protein
D CJE1820 ABC transporter, periplasmic substrate-binding protein, putative K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D CJE1818 ABC transporter, permease protein, putative K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D CJE1819 ABC transporter, ATP-binding protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D CJE1821 lipoprotein, putative K18480 linN; cholesterol transport system auxiliary component
D CJE1564 toluene tolerance protein, putative K07323 mlaC; phospholipid transport system substrate-binding protein
D CJE0716 phosphate ABC transporter, periplasmic phosphate-binding protein, putative K02040 pstS; phosphate transport system substrate-binding protein
D CJE0717 phosphate ABC transporter, permease protein PstC, putative K02037 pstC; phosphate transport system permease protein
D CJE0718 phosphate ABC transporter, permease protein PstA, putative K02038 pstA; phosphate transport system permease protein
D CJE0719 pstB; phosphate ABC transporter, ATP-binding protein K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D CJE0999 pebA; amino acid ABC transporter, periplasmic amino acid-binding protein PEB1 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D CJE0998 amino acid ABC transporter, permease protein PEB1 K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJE0997 amino acid ABC transporter, permease protein PEB1 K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D CJE1000 pebC; amino acid ABC transporter, ATP-binding protein PEB1 K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D CJE0834 cjaC; CjaC K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D CJE0980 amino acid ABC tansporter, permease protein, His/Glu/Gln/Arg/opine family K17077 artQ; arginine/lysine/histidine transport system permease protein
D CJE0981 amino acid ABC transporter, ATP-binding protein K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D CJE1162 high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJE1163 high affinity branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein K01999 livK; branched-chain amino acid transport system substrate-binding protein
D CJE1161 livH; high affinity branched-chain amino acid ABC transporter, permease protein K01997 livH; branched-chain amino acid transport system permease protein
D CJE1160 livM; high affinity branched-chain amino acid ABC transporter, permease protein K01998 livM; branched-chain amino acid transport system permease protein
D CJE1159 livG; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01995 livG; branched-chain amino acid transport system ATP-binding protein
D CJE1158 livF; high affinity branched-chain amino acid ABC transporter, ATP-binding protein K01996 livF; branched-chain amino acid transport system ATP-binding protein
D CJE0863 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CJE0861 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CJE0862 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CJE1334 lipoprotein, NLPA family K02073 metQ; D-methionine transport system substrate-binding protein
D CJE0864 ABC transporter, permease protein K02072 metI; D-methionine transport system permease protein
D CJE0865 ABC transporter, ATP-binding protein K02071 metN; D-methionine transport system ATP-binding protein
D CJE1064 surface antigen, CjaA K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CJE0906 amino acid-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D CJE0517 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein
D CJE0518 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein
D CJE1018 amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family K02029 ABC.PA.P; polar amino acid transport system permease protein
D CJE0519 amino acid ABC transporter, ATP-binding protein K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D CJE1755 peptide ABC transporter, periplasmic peptide-binding protein K25103 nikZ; nickel transport system substrate-binding protein
D CJE1754 peptide ABC transporter, permease protein K25104 nikY; nickel transport system permease protein
D CJE1753 peptide ABC transporter, permease protein K25105 nikX; nickel transport system permease protein
D CJE1752 peptide ABC transporter, ATP-binding protein K25106 nikW; nickel transport system ATP-binding protein [EC:7.2.2.11]
D CJE1751 peptide ABC transporter, ATP-binding protein K25107 nikV; nickel transport system ATP-binding protein [EC:7.2.2.11]
D CJE1542 ceuC; enterochelin ABC transporter, permease protein K25283 yclO; iron-siderophore transport system permease protein
D CJE1541 ceuB; enterochelin ABC transporter, permease protein K25284 yclN; iron-siderophore transport system permease protein
D CJE1543 ceuD; enterochelin ABC transporter, ATP-binding protein K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D CJE1789 hemin ABC transporter, periplasmic hemin-binding protein, putative K25034 btuF; cobalamin transport system substrate-binding protein
D CJE1787 hemin ABC transporter, permease protein, putative K25027 btuC; cobalamin transport system permease protein
D CJE1788 hemin ABC transporter, ATP-binding protein, putative K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D CJE0138 cation ABC transporter, periplasmic cation-binding protein K09815 znuA; zinc transport system substrate-binding protein
D CJE0136 cation ABC transporter, permease protein K09816 znuB; zinc transport system permease protein
D CJE0137 cation ABC transporter, ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D CJE1621 kpsM; capsular polysaccharide ABC transporter, permease protein K09688 kpsM; capsular polysaccharide transport system permease protein
D CJE1619 kpsE; capsular polysaccharide ABC transporter K10107 kpsE; capsular polysaccharide transport system permease protein
D CJE1620 kpsT; capsular polysaccharide ABC transporter, ATP-binding protein K09689 kpsT; capsular polysaccharide transport system ATP-binding protein [EC:7.6.2.12]
D CJE0913 membrane protein, putative K07091 lptF; lipopolysaccharide export system permease protein
D CJE0358 membrane protein, putative K11720 lptG; lipopolysaccharide export system permease protein
D CJE0770 ABC transporter, ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D CJE1412 cell division protein FtsX, putative K09811 ftsX; cell division transport system permease protein
D CJE1413 lolD; lipoprotein releasing system ATP-binding protein LolD K09812 ftsE; cell division transport system ATP-binding protein
D CJE1833 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CJE1834 ABC transporter, permease protein K02004 ABC.CD.P; putative ABC transport system permease protein
D CJE1019 permease, putative K02004 ABC.CD.P; putative ABC transport system permease protein
D CJE1835 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJE1314 ABC transporter, ATP-binding protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D CJE0536 fucP; L-fucose permease K02429 fucP; MFS transporter, FHS family, L-fucose permease
D CJE1791 kgtP; alpha-ketoglutarate permease K03761 kgtP; MFS transporter, MHS family, alpha-ketoglutarate permease
D CJE0300 major facilitator superfamily protein K03762 proP; MFS transporter, MHS family, proline/betaine transporter
D CJE0384 major facilitator family transporter K08173 ydfJ; MFS transporter, MHS family, metabolite:H+ symporter
D CJE0534 tartrate transporter, putative K26580 rhmT; MFS transporter, ACS family, inner membrane transport protein
D CJE1184 membrane protein, putative K03449 MFS.CP; MFS transporter, CP family, cyanate transporter
D CJE0034 drug resistance transporter, Bcr/CflA family K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D CJE1728 transporter, putative K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CJE1377 transporter, putative K19577 ydhP; MFS transporter, DHA1 family, inner membrane transport protein
D CJE0511 transporter, putative K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CJE0287 membrane protein, putative K19416 yccA; modulator of FtsH protease
D CJE0289 mechanosensitive ion channel family protein K16052 ynaI; MscS family membrane protein
D CJE0382 chemotaxis protein MotA, putative K02556 motA; chemotaxis protein MotA
D CJE0381 chemotaxis protein MotB, putative K02557 motB; chemotaxis protein MotB
D CJE0702 chemotaxis protein MotB, putative K02557 motB; chemotaxis protein MotB
D CJE0172 exbB-1; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D CJE1800 exbB-2; TonB system transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D CJE1801 exbD; biopolymer transport exbD protein K03559 exbD; biopolymer transport protein ExbD
D CJE0105 TonB system transport protein ExbD, putative K03559 exbD; biopolymer transport protein ExbD
D CJE0173 biopolymer transport protein, ExbD/TolR family K03559 exbD; biopolymer transport protein ExbD
D CJE0826 corA; magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D CJE0624 CrcB K06199 crcB; fluoride exporter
D CJE0176 transporter, putative K03699 tlyC; magnesium and cobalt exporter, CNNM family
D CJE1651 cadF; fibronectin-binding protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D CJE0847 cfrA; ferric receptor CfrA K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D CJE0171 TonB-dependent colicin receptor protein, putative K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D CJE1786 chuA; TonB-dependent heme receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D CJE0414 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
D CJE0124 outer membrane protein, OMP85 family K07277 SAM50; outer membrane protein insertion porin family
D CJE1217 lipoprotein, putative K05807 bamD; outer membrane protein assembly factor BamD
D CJE0752 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D CJE1389 organic solvent tolerance protein, putative K04744 lptD; LPS-assembly protein
D CJE1297 cation efflux family protein K16264 czcD; cobalt-zinc-cadmium efflux system protein
D CJE1026 cation efflux family protein K13283 fieF; ferrous-iron efflux pump FieF
D CJE0313 zinc transporter ZupT K07238 TC.ZIP; zinc transporter, ZIP family
D CJE0415 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJE0355 multidrug resistance protein, SMR family K18924 ykkC; paired small multidrug resistance pump
D CJE0354 multidrug resistance protein, SMR family K18925 ykkD; paired small multidrug resistance pump
D CJE1308 multidrug resistance protein, SMR family K11742 mdtI; spermidine export protein MdtI
D CJE1307 multidrug resistance protein, SMR family K11743 mdtJ; spermidine export protein MdtJ
D CJE0006 Na+/H+ antiporter family protein K07084 yuiF; putative amino acid transporter
D CJE0083 dcuA; anaerobic C4-dicarboxylate membrane transporter DcuA K07791 dcuA; anaerobic C4-dicarboxylate transporter DcuA
D CJE0772 dcuB; anaerobic C4-dicarboxylate membrane transporter DcuB K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB
D CJE0072 lctP; L-lactate permease K03303 lutP; lactate permease
D CJE1675 putP; sodium/proline permease K11928 putP; sodium/proline symporter
D CJE1326 dctA; C4-dicarboxylate transport protein K11103 dctA; aerobic C4-dicarboxylate transport protein
D CJE1240 sodium/dicarboxylate symporter K07862 sstT; serine/threonine transporter
D CJE1827 nhaA-2; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D CJE1826 nhaA-1; Na+/H+ antiporter NhaA K03313 nhaA; Na+:H+ antiporter, NhaA family
D CJE1366 sodium/hydrogen exchanger family protein K03455 KEA1_2_3; K+:H+ antiporter
D CJE1475 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D CJE1476 potassium uptake protein TrkA, putative K03499 trkA; trk/ktr system potassium uptake protein
D CJE1561 xanthine/uracil permease family protein K06901 pbuG; adenine/guanine/hypoxanthine permease
D CJE1797 sdaC; serine transporter K03837 sdaC; serine transporter
D CJE0628 Na/Pi-cotransporter, putative K03324 yjbB; phosphate:Na+ symporter
D CJE1321 arsB; arsenical pump membrane protein K03893 arsB; arsenical pump membrane protein
D CJE1733 arsenical-resistance protein, putative K03325 ACR3; arsenite transporter
D CJE0892 mviN; integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D CJE1015 membrane protein, putative K24180 mleP; malate permease and related proteins
D CJE1193 transporter, LysE family K06895 lysE; L-lysine exporter family protein LysE/ArgO
D CJE1254 integral membrane protein, MarC family K05595 marC; multiple antibiotic resistance protein
D CJE1182 cell division protein, FtsW/RodA/SpoVE family K03588 ftsW; cell division protein FtsW
D CJE0162 membrane protein, putative K23242 mntP; manganese efflux pump family protein
D CJE1830 iron permease, FTR1 family K07243 FTR; high-affinity iron transporter
D CJE1831 conserved hypothetical protein K07230 p19; periplasmic iron binding protein
D CJE0845 tonB; TonB K03832 tonB; periplasmic protein TonB
D CJE0106 TonB domain protein K03832 tonB; periplasmic protein TonB
D CJE0174 TonB-dependent colicin receptor protein, putative K03832 tonB; periplasmic protein TonB
D CJE0108 peptidoglycan-associated lipoprotein Omp18 K03640 pal; peptidoglycan-associated lipoprotein
D CJE0107 tolB protein, putative K03641 tolB; TolB protein
D CJE0416 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJE0709 macrolide-specific efflux protein macA K13888 macA; membrane fusion protein, macrolide-specific efflux system
D CJE1584 feoA family protein K04758 feoA; ferrous iron transport protein A
D CJE0175 antibiotic transport protein, putative K17938 sbmA; peptide/bleomycin uptake transporter
D CJE0815 transthyretin-like protein K07127 uraH; 5-hydroxyisourate hydrolase [EC:3.5.2.17]
C 02044 Secretion system [BR:cjr02044]
D CJE1647 ctsD; general secretory pathway protein D K02453 gspD; general secretion pathway protein D
D CJE1644 ctsE; general secretory pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8]
D CJE1643 ctsF; general secretory pathway protein F K02455 gspF; general secretion pathway protein F
D CJE1532 ctsG; transformation system protein K02456 gspG; general secretion pathway protein G
D CJE0781 hypothetical protein K02456 gspG; general secretion pathway protein G
D CJE0912 peptidase, A24 family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D CJE0931 YGGT family protein K02221 yggT; YggT family protein
D CJE0010 comEA; competence protein ComEA K02237 comEA; competence protein ComEA
D CJE1345 ComEC/Rec2 family protein K02238 comEC; competence protein ComEC
D CJE1172 ctsW; transformation system protein K02242 comFC; competence protein ComFC
D CJE0962 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJE0380 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CJE0935 FlhB domain protein K04061 flhB2; flagellar biosynthesis protein
D CJE0363 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CJE0365 flagellar assembly protein FliH, putative K02411 fliH; flagellar assembly protein FliH
D CJE0188 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJE0056 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CJE0400 fliN; flagellar switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJE0907 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CJE1847 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CJE1313 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJE1107 TraG-like protein K12056 traG; conjugal transfer mating pair stabilization protein TraG
D CJE1571 conserved hypothetical protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1]
D CJE1141 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D CJE1139 hypothetical protein K11894 impI; type VI secretion system protein ImpI
D CJE1020 secA; preprotein translocase, SecA subunit K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D CJE1236 secD; protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D CJE0522 secE; preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D CJE1235 secF; protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D CJE0286 secG; preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D CJE1856 secY; preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D CJE0809 ffh; signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D CJE1340 ftsY; signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D CJE1237 yajC; preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D CJE1038 inner membrane protein, 60 kDa K03217 yidC; YidC/Oxa1 family membrane protein insertase
D CJE1310 twin-arginine translocation protein, TatA/E family K03116 tatA; sec-independent protein translocase protein TatA
D CJE0682 tatB; twin-arginine translocation protein TatB K03117 tatB; sec-independent protein translocase protein TatB
D CJE0681 tatC; Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cjr02042]
D CJE0075 cdtA; cytolethal distending toxin, subunit A K11013 cdtA; cytolethal distending toxin subunit A
D CJE0074 cdtB; cytolethal distending toxin, subunit B K11014 cdtB; cytolethal distending toxin subunit B
D CJE0073 cdtC; cytolethal distending toxin, subunit C K11015 cdtC; cytolethal distending toxin subunit C
D CJE0176 transporter, putative K03699 tlyC; magnesium and cobalt exporter, CNNM family
C 02022 Two-component system [BR:cjr02022]
D CJE1361 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJE1398 racS; sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJE1357 sensor histidine kinase K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3]
D CJE0404 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJE1397 racR; DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJE1362 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJE0969 DNA-binding response regulator K02483 K02483; two-component system, OmpR family, response regulator
D CJE0884 sensor histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D CJE1168 sigma-54 dependent DNA-binding response regulator K02481 flgR; two-component system, NtrC family, response regulator
D CJE0332 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJE1261 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJE1002 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJE0333 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
C 02035 Bacterial motility proteins [BR:cjr02035]
D CJE0332 cheA; chemotaxis protein CheA K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D CJE0331 cheW; purine-binding chemotaxis protein CheW K03408 cheW; purine-binding chemotaxis protein CheW
D CJE1001 cheR; chemotaxis protein methyltransferase CheR K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D CJE1002 cheB; protein-glutamate methylesterase CheB K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D CJE1261 cheY; chemotaxis protein CheY K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D CJE0333 cheV; chemotaxis protein CheV K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D CJE0314 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE1253 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE1679 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0312 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0019 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0140 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE1735 methyl-accepting chemotaxis protein K03406 mcp; methyl-accepting chemotaxis protein
D CJE0365 flagellar assembly protein FliH, putative K02411 fliH; flagellar assembly protein FliH
D CJE0188 fliI; flagellum-specific ATP synthase FliI K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D CJE0907 fliP; flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D CJE1847 fliQ; flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D CJE1313 fliR; flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D CJE0962 flhA; flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D CJE0380 flhB; flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D CJE0364 fliG; flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D CJE0057 fliM; flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D CJE0056 fliY; flagellar motor switch protein K02417 fliN; flagellar motor switch protein FliN
D CJE0400 fliN; flagellar switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D CJE0363 fliF; flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D CJE1636 flgI; flagellar P-ring protein FlgI K02394 flgI; flagellar P-ring protein FlgI
D CJE0860 flagellar basal-body P-ring formation protein FlgA, putative K02386 flgA; flagellar basal body P-ring formation protein FlgA
D CJE0786 flgH; flagellar L-ring protein FlgH K02393 flgH; flagellar L-ring protein FlgH
D CJE1595 fliL; flagellar protein FliL K02415 fliL; flagellar protein FliL
D CJE0630 fliE; flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D CJE0040 hypothetical protein K02414 fliK; flagellar hook-length control protein FliK
D CJE0632 flgB; flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D CJE0631 flgC; flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D CJE0041 flgD; flagellar hook assembly protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D CJE0796 flagellar basal-body rod protein K02391 flgF; flagellar basal-body rod protein FlgF
D CJE0797 flgG; flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D CJE1637 conserved hypothetical protein K02395 flgJ; peptidoglycan hydrolase FlgJ
D CJE0042 flgE-1; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D CJE1896 flgE-2; flagellar hook protein K02390 flgE; flagellar hook protein FlgE
D CJE1640 flagellar hook-associated protein FlgK, putative K02396 flgK; flagellar hook-associated protein 1
D CJE0966 flagellin family protein K02397 flgL; flagellar hook-associated protein 3 FlgL
D CJE1170 lipoprotein, putative K09860 flgP; outer membrane protein FlgP
D CJE1169 hypothetical protein K24346 flgQ; flagellar motility protein FlgQ
D CJE1528 flaA; flagellin subunit protein FlaA K02406 fliC; flagellin
D CJE1526 flaB; flagellin subunit protein FlaB K02406 fliC; flagellin
D CJE0820 flaC; flagellin subunit protein FlaC K02406 fliC; flagellin
D CJE0652 fliD; flagellar hook-associated protein FliD K02407 fliD; flagellar hook-associated protein 2
D CJE0653 fliS; flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D CJE0058 fliA; RNA polymerase sigma factor, sigma-F K02405 fliA; RNA polymerase sigma factor FliA
D CJE0382 chemotaxis protein MotA, putative K02556 motA; chemotaxis protein MotA
D CJE0381 chemotaxis protein MotB, putative K02557 motB; chemotaxis protein MotB
D CJE0702 chemotaxis protein MotB, putative K02557 motB; chemotaxis protein MotB
D CJE1218 conserved hypothetical protein K13626 fliW; flagellar assembly factor FliW
D CJE0651 flaG; flagellar protein FlaG K06603 flaG; flagellar protein FlaG
D CJE0061 flhF; flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D CJE0060 ATPase, ParA family K04562 flhG; flagellar biosynthesis protein FlhG
D CJE0912 peptidase, A24 family K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cjr04812]
D CJE0325 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CJE0795 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJE0794 ftsA; cell division protein FtsA K03590 ftsA; cell division protein FtsA
D CJE0095 chromosome partitioning protein, ParA family K03496 parA; chromosome partitioning protein
D CJE0096 chromosome partitioning protein, ParB family K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cjr04147]
D CJE0625 htpG; heat shock protein HtpG K04079 HSP90A; molecular chaperone HtpG
D CJE1844 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D CJE1590 gapA; glyceraldehyde 3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D CJE1589 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D CJE0441 pyk; pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D CJE0379 antioxidant, AhpC/Tsa family K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D CJE1356 groEL; co-chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D CJE0850 dnaK; chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D CJE1706 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D CJE1201 guaB; inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D CJE0520 tuf; translation elongation factor Tu K02358 tuf; elongation factor Tu
D CJE0977 HIT family protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D CJE1301 ldh; L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D CJE0742 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D CJE1005 apt; adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D CJE1009 argH; argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D CJE0767 argG; argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D CJE0927 fbp; fructose-1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D CJE0798 glnA; glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D CJE1075 hemB; porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D CJE0970 serA; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D CJE1033 purH; bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D CJE1588 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cjr02048]
D CJE1695 cas1; CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D CJE1694 cas2; CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D CJE1724 hsdM; type I restriction-modification system, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D CJE0220 dam; DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72]
D CJE0031 type II restriction-modification enzyme K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CJE0201 D12 class N6 adenine-specific DNA methyltransferase K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CJE1421 site-specific DNA-methyltransferase K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D CJE0550 site-specific DNA-methyltransferase, putative K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D CJE0732 type III restriction-modification enzyme K01156 res; type III restriction enzyme [EC:3.1.21.5]
D CJE0731 type III restriction/modification enzyme, methylase subunit K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D CJE1473 HNH endonuclease domain protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D CJE0134 McrBC restriction endonuclease system, McrB subunit, putative K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D CJE0135 hypothetical protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D CJE1470 toxin-antitoxin protein, putative K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D CJE1360 conserved hypothetical protein K18918 relB; RHH-type transcriptional regulator, rel operon repressor / antitoxin RelB
D CJE1103 conserved hypothetical protein K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D CJE1100 death-on-curing family protein K07341 doc; death on curing protein
D CJE0795 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D CJE0325 mreB; cell shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D CJE0932 gltX-1; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE1480 gltX-2; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D CJE0291 cysteine desulfurase, putative K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cjr01504]
D CJE0344 beta-lactamase K19210 blaOXA-61; beta-lactamase class D OXA-61 [EC:3.5.2.6]
D CJE1488 conserved domain protein K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D CJE0511 transporter, putative K08217 mef; MFS transporter, DHA3 family, macrolide efflux protein
D CJE0416 cmeA; RND efflux system, membrane fusion protein CmeA K03585 acrA; membrane fusion protein, multidrug efflux system
D CJE0415 cmeB; RND efflux system, inner membrane transporter CmeB K18138 acrB; multidrug efflux pump
D CJE0414 cmeC; RND efflux system, outer membrane lipoprotein CmeC K18139 oprM; outer membrane protein, multidrug efflux system
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cjr03100]
D CJE_tRNA-Ala-1 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJE_tRNA-Ala-3 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJE_tRNA-Ala-2 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJE_tRNA-Ala-4 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D CJE_tRNA-Arg-3 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJE_tRNA-Arg-4 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJE_tRNA-Arg-5 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJE_tRNA-Arg-1 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D CJE_tRNA-Asn-1 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D CJE_tRNA-Asp-1 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJE_tRNA-Asp-2 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D CJE_tRNA-Cys-1 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D CJE_tRNA-Gln-1 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D CJE_tRNA-Arg-2 tRNA-Arg K14224 tRNA-Glu; tRNA Glu
D CJE_tRNA-Glu-1 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D CJE_tRNA-Gly-1 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJE_tRNA-Gly-3 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJE_tRNA-Gly-2 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D CJE_tRNA-His-1 tRNA-His K14226 tRNA-His; tRNA His
D CJE_tRNA-Ile-1 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJE_tRNA-Ile-3 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJE_tRNA-Ile-2 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D CJE_tRNA-Leu-3 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJE_tRNA-Leu-4 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJE_tRNA-Leu-1 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJE_tRNA-Leu-2 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D CJE_tRNA-Lys-1 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJE_tRNA-Lys-2 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D CJE_tRNA-Met-3 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJE_tRNA-Met-2 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJE_tRNA-Met-1 tRNA-Met K14230 tRNA-Met; tRNA Met
D CJE_tRNA-Phe-1 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D CJE_tRNA-Pro-1 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D CJE_tRNA-Ser-1 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJE_tRNA-Ser-3 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJE_tRNA-Ser-2 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D CJE_tRNA-Thr-1 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJE_tRNA-Thr-2 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D CJE_tRNA-Trp-1 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D CJE_tRNA-Tyr-1 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D CJE_tRNA-Val-3 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJE_tRNA-Val-1 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJE_tRNA-Val-2 tRNA-Val K14237 tRNA-Val; tRNA Val
D CJE_tRNA-SeC-1 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D CJE_Cj16SA rrsA; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJE_Cj16SB rrsB; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJE_Cj16SC rrsC; 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D CJE_Cj23SA rrlA; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJE_Cj23SB rrlB; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJE_Cj23SC rrlC; 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D CJE_CjSRP1 sRNA K01983 ffs; SRP RNA
D CJE_CjrnpB1 sRNA K01978 rnpB; M1 RNA
D CJE_CjtmRNA1 sRNA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D CJE0165 saccharopine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D CJE1716 flavodoxin-like fold domain protein K03923 mdaB; NADPH dehydrogenase (quinone) [EC:1.6.5.10]
D CJE0740 msrA; peptide methionine sulfoxide reductase K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D CJE1255 msrB; methionine-R-sulfoxide reductase K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D CJE0428 oxidoreductase, molybdopterin binding, putative K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-]
D CJE0407 ccpA-2; cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CJE0020 ccpA-1; cytochrome c551 peroxidase K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D CJE0320 antioxidant, AhpC/Tsa family K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CJE0870 tpx; thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D CJE1402 hydB; quinone-reactive Ni/Fe-hydrogenase, large subunit K05922 hydB; quinone-reactive Ni/Fe-hydrogenase large subunit [EC:1.12.5.1]
D CJE1586 hydrogenase, (NiFe)/(NiFeSe) small subunit family K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D CJE1403 hydA; quinone-reactive Ni/Fe-hydrogenase, small subunit K05927 hydA; quinone-reactive Ni/Fe-hydrogenase small subunit [EC:1.12.5.1]
D CJE0715 ftn; nonheme iron-containing ferritin K02217 ftnA; ferritin [EC:1.16.3.2]
D CJE1732 arsC; arsenate reductase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D CJE0279 pcm; protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D CJE1317 cyclopropane-fatty-acyl-phospholipid synthase, putative K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D CJE0412 radical SAM domain protein K23078 mqnK; menaquinone C8-methyltransferase [EC:2.1.1.350]
D CJE1238 cutE; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D CJE1252 aat; leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D CJE1179 arginine-tRNA-protein transferase-related protein K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29]
D CJE1268 pglB; general glycosylation pathway protein K17251 pglB; undecaprenyl-diphosphooligosaccharide---protein glycotransferase [EC:2.4.99.19]
D CJE0456 lgt; prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D CJE1266 pglC; general glycosylation pathway protein K15915 pglC; undecaprenyl phosphate N,N'-diacetylbacillosamine 1-phosphate transferase [EC:2.7.8.36]
D CJE1045 thioesterase family protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D CJE1082 sixA; phosphohistidine phosphatase SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D CJE0256 dns; extracellular deoxyribonuclease K01150 endA; deoxyribonuclease I [EC:3.1.21.1]
D CJE0747 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D CJE1061 thermonuclease family protein K01174 nuc; micrococcal nuclease [EC:3.1.31.1]
D CJE0184 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D CJE1579 endoribonuclease L-PSP, putative K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D CJE0181 conserved hypothetical protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D CJE0538 conserved hypothetical protein K03534 rhaM; L-rhamnose mutarotase [EC:5.1.3.32]
D CJE1841 DNA ligase, ATP-dependent K26441 lig; DNA ligase [EC:6.5.1.1]
D CJE1295 copper-translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D CJE0071 cysteine-rich domain protein K18928 lldE; L-lactate dehydrogenase complex protein LldE
D CJE0070 iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF
D CJE0069 conserved domain protein K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D CJE1681 fdhD; formate dehydrogenase accessory protein FdhD K02379 fdhD; FdhD protein
D CJE0290 NifU family protein K13819 K13819; NifU-like protein
D CJE0876 napD; NapD K02570 napD; periplasmic nitrate reductase NapD
D CJE1573 fldA; flavodoxin K03839 fldA; flavodoxin I
D CJE0872 napG; ferredoxin-type protein NapG K02573 napG; ferredoxin-type protein NapG
D CJE0873 napH; ferredoxin-type protein NapH K02574 napH; ferredoxin-type protein NapH
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D CJE0819 conserved hypothetical protein TIGR00044 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D CJE1284 lipooligosaccharide biosynthesis glycosyltransferase, putative K07270 K07270; glycosyl transferase, family 25
C 99987 Cofactor metabolism
D CJE0928 mobB; molybdopterin-guanine dinucleotide biosynthesis protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D CJE1435 DNA-binding protein Roi K07741 antB; anti-repressor protein
D CJE0548 phage anti-repressor protein, putative K07741 antB; anti-repressor protein
C 99974 Translation
C 99975 Protein processing
D CJE1028 heat shock protein HslJ, putative K03668 hslJ; heat shock protein HslJ
D CJE1250 conserved hypothetical protein K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D CJE0186 tig; trigger factor K03545 tig; trigger factor
D CJE0427 membrane protein, putative K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D CJE1248 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D CJE0727 hypC; hydrogenase assembly chaperone HypC/HupF K04653 hypC; hydrogenase expression/formation protein HypC
D CJE0728 hypD; hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D CJE0729 hypE; hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D CJE0725 hypF; [NiFe] hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D CJE0183 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein
C 99976 Replication and repair
D CJE1226 endonuclease III, putative K07457 K07457; endonuclease III related protein
D CJE0144 conserved hypothetical protein K07460 yraN; putative endonuclease
D CJE0737 dprA; DNA processing protein A K04096 smf; DNA processing protein
D CJE0191 ATPase, AAA family protein K07478 ycaJ; putative ATPase
D CJE1274 wlaX; polysaccharide biosynthesis protein K07501 K07501; 3'-5' exonuclease
D CJE0270 bacteriophage DNA transposition protein A, putative K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D CJE1814 conserved hypothetical protein TIGR00103 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D CJE1177 AcrB/AcrD/AcrF family protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D CJE0757 di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D CJE1328 phosphate transporter family protein K03306 TC.PIT; inorganic phosphate transporter, PiT family
D CJE1013 sodium transporter, putative K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CJE0704 sodium-dependent transporter, putative K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CJE1012 sodium transporter, putative K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family
D CJE0982 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
C 99978 Cell growth
D CJE1037 conserved hypothetical protein K06346 jag; spoIIIJ-associated protein
D CJE1713 conserved hypothetical protein K06351 kipI; inhibitor of KinA
C 99993 Cell motility
D CJE0086 lipoprotein, putative K07337 K07337; penicillin-binding protein activator
C 99995 Signaling proteins
D CJE0995 cstA; carbon starvation protein A K06200 cstA; carbon starvation protein
D CJE0038 typA; GTP-binding protein TypA K06207 typA; GTP-binding protein
D CJE0423 conserved hypothetical protein K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D CJE1021 conserved hypothetical protein K03634 lolA; outer membrane lipoprotein carrier protein
D CJE1563 lipoprotein, VacJ family K04754 mlaA; phospholipid-binding lipoprotein MlaA
D CJE1600 kpsS; capsule polysaccharide export protein KpsS K07265 kpsS; capsular polysaccharide export protein
D CJE1601 kpsC; capsule polysaccharide export protein KpsC K07266 kpsC; capsular polysaccharide export protein
D CJE1312 conserved hypothetical protein K07288 tspA; uncharacterized membrane protein
C 99994 Others
D CJE1359 non-heme iron protein, hemerythrin family K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D CJE0448 cvpA family protein K03558 cvpA; membrane protein required for colicin V production
D CJE1703 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase domain protein K03796 bax; Bax protein
D CJE0515 conserved hypothetical protein K06886 glbN; hemoglobin
D CJE1346 rbn; ribonuclease BN K07058 K07058; membrane protein
D CJE0453 conserved hypothetical protein K03749 dedD; DedD protein
D CJE0178 PhnA domain protein K06193 phnA; protein PhnA
C 99997 Function unknown
D CJE0921 ankyrin repeat protein K06867 K06867; uncharacterized protein
D CJE1577 ankyrin repeat protein K06867 K06867; uncharacterized protein
D CJE1415 fibronectin type III domain protein K06882 K06882; uncharacterized protein
D CJE0234 baseplate assembly protein W, putative K06903 W; Bacteriophage baseplate protein W
D CJE0254 tail protein D, putative K06905 D; Bacteriophage probable baseplate hub protein
D CJE0252 phage tail protein, putative K06906 gpU; phage tail protein
D CJE0227 major tail sheath protein K06907 FI; Bacteriophage tail sheath protein
D CJE0226 phage major tail tube protein, putative K06908 FII; Bacteriophage tail tube protein
D CJE0883 conserved hypothetical protein K06921 K06921; uncharacterized protein
D CJE1227 conserved hypothetical protein K06923 K06923; uncharacterized protein
D CJE0916 CoA-binding domain protein K06929 K06929; uncharacterized protein
D CJE0604 conserved hypothetical protein K06940 K06940; uncharacterized protein
D CJE0025 sodium/dicarboxylate symporter K06956 K06956; uncharacterized protein
D CJE0811 conserved hypothetical protein K06960 K06960; uncharacterized protein
D CJE0055 peptidase family protein K06992 K06992; uncharacterized protein
D CJE1565 membrane protein, putative K07003 K07003; uncharacterized protein
D CJE1730 permease, putative K07089 K07089; uncharacterized protein
D CJE1642 membrane protein, putative K07090 K07090; uncharacterized protein
D CJE0391 membrane protein, putative K07090 K07090; uncharacterized protein
D CJE0141 conserved hypothetical protein K07093 K07093; uncharacterized protein
D CJE0961 conserved hypothetical protein K07097 K07097; uncharacterized protein
D CJE0933 Ser/Thr protein phosphatase family protein K07098 K07098; uncharacterized protein
D CJE1673 membrane protein, putative K07112 K07112; uncharacterized protein
D CJE0462 conserved hypothetical protein K07126 K07126; uncharacterized protein
D CJE1704 conserved hypothetical protein K07133 K07133; uncharacterized protein
D CJE0806 conserved hypothetical protein K07164 K07164; uncharacterized protein
D CJE1039 conserved hypothetical protein K08998 K08998; uncharacterized protein
D CJE0676 GatB/Yqey family protein K09117 K09117; uncharacterized protein
D CJE1666 membrane protein, putative K09792 K09792; uncharacterized protein
D CJE0499 conserved hypothetical protein K09794 K09794; uncharacterized protein
D CJE0713 conserved hypothetical protein K09795 K09795; uncharacterized protein
D CJE0033 conserved hypothetical protein K09797 K09797; uncharacterized protein
D CJE0736 conserved domain protein K09798 K09798; uncharacterized protein
D CJE1668 conserved hypothetical protein K09804 K09804; uncharacterized protein
D CJE1774 HrgA protein K09805 K09805; uncharacterized protein
D CJE1212 conserved hypothetical protein K09824 virK; uncharacterized protein
D CJE0084 lipoprotein, putative K09859 K09859; uncharacterized protein
D CJE1066 conserved hypothetical protein K09861 K09861; uncharacterized protein
D CJE0917 conserved hypothetical protein K09943 K09943; uncharacterized protein
D CJE1089 trkA domain protein K09944 K09944; uncharacterized protein
D CJE1622 conserved hypothetical protein K09979 K09979; uncharacterized protein
D CJE1298 conserved hypothetical protein K09981 K09981; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 12, 2024