+D GENES KO
#
KEGG Orthology (KO) - Cellulosilyticum lentocellum
%
!
A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cle00010]
D Clole_1649 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Clole_1062 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clole_2584 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clole_2600 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Clole_2999 Fructose-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Clole_1453 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Clole_2833 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Clole_2835 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Clole_2834 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Clole_2832 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Clole_1611 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Clole_2829 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clole_2251 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_1021 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_2583 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_2358 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Clole_4160 Pyruvate synthase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Clole_4159 Pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Clole_4162 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Clole_4161 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Clole_2027 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_1006 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_1004 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_1690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Clole_0779 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_3867 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clole_2965 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Clole_0530 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Clole_4133 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Clole_3958 Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D Clole_0617 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Clole_3922 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Clole_0311 PTS system, glucose subfamily, IIA subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Clole_1200 PTS system, glucose subfamily, IIA subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
C 00020 Citrate cycle (TCA cycle) [PATH:cle00020]
D Clole_1766 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Clole_1325 (R)-citramalate synthase K05942 E2.3.3.3; citrate (Re)-synthase [EC:2.3.3.3]
D Clole_3688 3-isopropylmalate dehydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Clole_1326 Isocitrate dehydrogenase (NAD(+)) K00030 IDH3; isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]
D Clole_0768 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Clole_0769 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Clole_0617 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Clole_4160 Pyruvate synthase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Clole_4159 Pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Clole_4162 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Clole_4161 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Clole_2027 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_1006 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_1004 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cle00030]
D Clole_1062 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clole_1781 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Clole_0569 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Clole_3482 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Clole_0568 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Clole_3683 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Clole_1146 deoxyribose-phosphate aldolase K01619 deoC; deoxyribose-phosphate aldolase [EC:4.1.2.4]
D Clole_1317 ribokinase K00852 rbsK; ribokinase [EC:2.7.1.15]
D Clole_2277 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Clole_4133 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Clole_1541 phosphoribosyltransferase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Clole_1101 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Clole_3857 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D Clole_3958 Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]
D Clole_3855 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Clole_3856 PfkB domain protein K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D Clole_0256 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Clole_1453 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Clole_2999 Fructose-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Clole_2584 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clole_2600 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
C 00040 Pentose and glucuronate interconversions [PATH:cle00040]
D Clole_2811 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Clole_1221 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Clole_0688 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2]
D Clole_0686 Pectate disaccharide-lyase K22994 pelX; pectate disaccharide-lyase [EC:4.2.2.9]
D Clole_1219 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase K01815 kduI; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [EC:5.3.1.17]
D Clole_4233 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Clole_1218 2-deoxy-D-gluconate 3-dehydrogenase K00065 kduD; 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase [EC:1.1.1.127]
D Clole_3971 Alpha-galactosidase K22933 lplD; galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
D Clole_0606 Alpha-galactosidase K22933 lplD; galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
D Clole_1214 Glucuronate isomerase K01812 uxaC; glucuronate isomerase [EC:5.3.1.12]
D Clole_1216 Tagaturonate reductase K00041 uxaB; tagaturonate reductase [EC:1.1.1.58]
D Clole_1217 Altronate dehydratase K01685 uxaA; altronate hydrolase [EC:4.2.1.7]
D Clole_0560 mannonate dehydratase K01686 uxuA; mannonate dehydratase [EC:4.2.1.8]
D Clole_0561 Mannitol 2-dehydrogenase K00040 uxuB; fructuronate reductase [EC:1.1.1.57]
D Clole_3792 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Clole_3827 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Clole_4029 Xylose isomerase domain-containing protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Clole_0503 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Clole_1781 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Clole_0501 L-arabinose isomerase K01804 araA; L-arabinose isomerase [EC:5.3.1.4]
D Clole_0025 xylulokinase K00854 xylB; xylulokinase [EC:2.7.1.17]
D Clole_0026 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
C 00051 Fructose and mannose metabolism [PATH:cle00051]
D Clole_1968 type 3a cellulose-binding domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Clole_1631 Mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Clole_1102 Endoglucanase H/Glycosyl hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Clole_3357 Mannan endo-1,4-beta-mannosidase K19355 MAN; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Clole_0213 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Clole_3356 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Clole_3360 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Clole_3817 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Clole_3816 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Clole_2584 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clole_2600 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Clole_2999 Fructose-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Clole_3843 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
D Clole_0026 xylose isomerase K01805 xylA; xylose isomerase [EC:5.3.1.5]
D Clole_1453 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Clole_2833 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Clole_3815 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Clole_3683 sugar-phosphate isomerase, RpiB/LacA/LacB family K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Clole_3844 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
C 00052 Galactose metabolism [PATH:cle00052]
D Clole_2965 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Clole_0530 Aldose 1-epimerase K01785 galM; aldose 1-epimerase [EC:5.1.3.3]
D Clole_2967 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Clole_2969 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Clole_2066 hypothetical protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Clole_2968 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clole_1711 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clole_1713 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clole_3827 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Clole_4133 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Clole_1649 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Clole_0250 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Clole_3323 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Clole_0249 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Clole_3706 Beta-galactosidase K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D Clole_0693 glycoside hydrolase family 35 K12308 bgaB; beta-galactosidase [EC:3.2.1.23]
D Clole_3366 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Clole_3367 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Clole_3326 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Clole_2584 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clole_2600 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Clole_0042 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Clole_0764 Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Clole_0482 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
C 00053 Ascorbate and aldarate metabolism [PATH:cle00053]
D Clole_3792 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Clole_4029 Xylose isomerase domain-containing protein TIM barrel K03079 ulaE; L-ribulose-5-phosphate 3-epimerase [EC:5.1.3.22]
D Clole_0503 L-ribulose-5-phosphate 4-epimerase K03077 araD; L-ribulose-5-phosphate 4-epimerase [EC:5.1.3.4]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00500 Starch and sucrose metabolism [PATH:cle00500]
D Clole_0041 PTS system, glucose-like IIB subunint K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Clole_0042 sucrose-6-phosphate hydrolase K01193 INV; beta-fructofuranosidase [EC:3.2.1.26]
D Clole_0764 Oligo-1,6-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Clole_0482 Alpha-glucosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D Clole_0212 sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D Clole_3827 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Clole_2594 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_0676 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_1639 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_0559 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_3150 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Clole_3976 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0675 Cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_2863 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_1765 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_3667 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0683 Cellulase., Gelatinase B K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0038 Cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_2598 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0709 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_2599 type 3a cellulose-binding domain protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_1921 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0485 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_2576 glycosyltransferase 36 K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D Clole_3988 cellobiose phosphorylase-like protein K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D Clole_3989 glycosyltransferase 36 K00702 E2.4.1.20; cellobiose phosphorylase [EC:2.4.1.20]
D Clole_3922 6-phospho-beta-glucosidase K01223 E3.2.1.86B; 6-phospho-beta-glucosidase [EC:3.2.1.86]
D Clole_1706 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Clole_1097 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Clole_1098 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Clole_3133 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Clole_1067 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Clole_2476 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Clole_3679 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Clole_3837 glycogen/starch/alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Clole_2943 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D Clole_1801 pullulanase, type I K01200 pulA; pullulanase [EC:3.2.1.41]
D Clole_1150 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Clole_0109 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Clole_2971 alpha amylase catalytic region K01176 AMY; alpha-amylase [EC:3.2.1.1]
D Clole_3851 Cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Clole_1933 Cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Clole_0302 Cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Clole_2977 Cyclomaltodextrinase K01208 cd; cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:3.2.1.54 3.2.1.133 3.2.1.135]
D Clole_3838 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Clole_0765 PTS system IIBC component protein K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D Clole_0766 Endonuclease/exonuclease/phosphatase K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D Clole_1007 Endonuclease/exonuclease/phosphatase K06896 mapP; maltose 6'-phosphate phosphatase [EC:3.1.3.90]
D Clole_2073 Isoamylase K01214 ISA; isoamylase [EC:3.2.1.68]
D Clole_3451 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D Clole_3450 alpha,alpha-phosphotrehalase K01226 treC; trehalose-6-phosphate hydrolase [EC:3.2.1.93]
D Clole_4133 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Clole_1649 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Clole_1062 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clole_0213 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Clole_3356 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cle00520]
D Clole_2843 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Clole_3233 glycosyltransferase 36 K18675 chbP; N,N'-diacetylchitobiose phosphorylase [EC:2.4.1.280]
D Clole_3268 N-acetylglucosamine-6-phosphate deacetylase K01443 nagA; N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25]
D Clole_0213 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Clole_3356 Fructokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D Clole_2038 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Clole_3355 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Clole_1100 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Clole_3771 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Clole_2329 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Clole_2926 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Clole_3629 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Clole_3571 UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing K18429 legG; GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing) [EC:3.2.1.184]
D Clole_3572 N-acetylneuraminate synthase K18430 legI; N,N'-diacetyllegionaminate synthase [EC:2.5.1.101]
D Clole_3570 N-acylneuraminate cytidylyltransferase K18431 legF; CMP-N,N'-diacetyllegionaminic acid synthase [EC:2.7.7.82]
D Clole_0555 alpha-L-arabinofuranosidase domain protein K01209 abfA; alpha-L-arabinofuranosidase [EC:3.2.1.55]
D Clole_3947 Alpha-N-arabinofuranosidase K15921 xynD; arabinoxylan arabinofuranohydrolase [EC:3.2.1.55]
D Clole_0528 Alpha-N-arabinofuranosidase K01198 xynB; xylan 1,4-beta-xylosidase [EC:3.2.1.37]
D Clole_0311 PTS system, glucose subfamily, IIA subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Clole_1200 PTS system, glucose subfamily, IIA subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Clole_1649 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Clole_4133 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Clole_3827 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Clole_3792 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Clole_2967 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Clole_2969 UDP-glucose--hexose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Clole_2066 hypothetical protein K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Clole_2968 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clole_1711 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clole_1713 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clole_1062 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clole_3360 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Clole_3817 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Clole_3816 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Clole_3815 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Clole_3813 Glutamine--scyllo-inositol transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Clole_3584 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Clole_1706 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Clole_1707 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D Clole_1705 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D Clole_1097 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D Clole_1098 glucose-1-phosphate adenylyltransferase, GlgD subunit K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:cle00620]
D Clole_4160 Pyruvate synthase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Clole_4159 Pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Clole_4162 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Clole_4161 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Clole_2027 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_1006 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_1004 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_0907 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Clole_2255 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Clole_1081 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Clole_4088 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D Clole_0779 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_3867 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_2315 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Clole_2316 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Clole_2251 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_1021 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_2583 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_3045 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Clole_3049 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Clole_3047 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Clole_3046 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clole_4165 D-lactate dehydrogenase (cytochrome) K26113 lctD; lactate dehydrogenase (NAD+,ferredoxin) subunit LctD [EC:1.1.1.436]
D Clole_1690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Clole_2223 D-lactate dehydrogenase K03778 ldhA; D-lactate dehydrogenase [EC:1.1.1.28]
D Clole_3434 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Clole_1251 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Clole_4003 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Clole_2373 Glyoxalase/bleomycin resistance protein/dioxygenase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D Clole_2542 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Clole_4014 beta-lactamase domain protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Clole_1048 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Clole_2266 Pyruvate carboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Clole_2003 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clole_2267 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clole_0768 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit K01677 E4.2.1.2AA; fumarate hydratase subunit alpha [EC:4.2.1.2]
D Clole_0769 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit K01678 E4.2.1.2AB; fumarate hydratase subunit beta [EC:4.2.1.2]
D Clole_0617 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Clole_2358 pyruvate, phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Clole_0110 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Clole_2855 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Clole_2856 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Clole_0461 Homocitrate synthase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
D Clole_0460 isopropylmalate/homocitrate/citramalate synthase-like protein K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cle00630]
D Clole_1766 Citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Clole_3688 3-isopropylmalate dehydratase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Clole_2655 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Clole_0145 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Clole_2606 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Clole_1909 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Clole_0684 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Clole_2194 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4238 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4245 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_1269 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Clole_2718 2-hydroxy-3-oxopropionate reductase K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60]
D Clole_0256 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Clole_3857 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
C 00640 Propanoate metabolism [PATH:cle00640]
D Clole_2315 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Clole_2316 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Clole_4160 Pyruvate synthase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Clole_4159 Pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Clole_4162 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Clole_4161 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Clole_0907 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Clole_2255 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Clole_1081 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Clole_3045 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Clole_3049 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Clole_3047 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Clole_3046 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Clole_0538 Acetylornithine transaminase K25571 pydD; beta-alanine---2-oxoglutarate transaminase [EC:2.6.1.120]
D Clole_1690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Clole_2102 methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D Clole_2256 Methylglyoxal synthase K01734 mgsA; methylglyoxal synthase [EC:4.2.3.3]
D Clole_1539 NADP-dependent oxidoreductase domain K18471 ydjG; methylglyoxal reductase [EC:1.1.1.-]
C 00650 Butanoate metabolism [PATH:cle00650]
D Clole_4088 acetaldehyde dehydrogenase (acetylating) K00132 E1.2.1.10; acetaldehyde dehydrogenase (acetylating) [EC:1.2.1.10]
D Clole_0779 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_3867 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_3219 Alcohol dehydrogenase (NADP(+)) K00100 bdhAB; butanol dehydrogenase [EC:1.1.1.-]
D Clole_2003 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clole_2267 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clole_2268 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Clole_2269 sodium pump decarboxylase, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Clole_0907 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Clole_2255 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Clole_1081 formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54]
D Clole_4160 Pyruvate synthase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Clole_4159 Pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Clole_4162 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Clole_4161 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Clole_2027 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_1006 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_1004 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Clole_2847 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_2859 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_1708 Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_2858 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cle00660]
D Clole_2847 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_2859 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_1708 Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_2858 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Clole_2852 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Clole_2850 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D Clole_2833 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cle00190]
D Clole_1576 NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Clole_1577 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Clole_1578 hydrogenase, Fe-only K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Clole_0894 NADH dehydrogenase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Clole_3621 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Clole_3619 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Clole_3620 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Clole_3622 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Clole_3618 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Clole_3626 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Clole_3623 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Clole_3624 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Clole_3625 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Clole_1364 H+transporting two-sector ATPase alpha/beta subunit central region K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1]
D Clole_1365 H+transporting two-sector ATPase alpha/beta subunit central region K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B
D Clole_1359 H+transporting two-sector ATPase C (AC39) subunit K02119 ATPVC; V/A-type H+/Na+-transporting ATPase subunit C
D Clole_1366 V-type ATPase, D subunit K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D
D Clole_1363 H+transporting two-sector ATPase E subunit K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E
D Clole_1362 Vacuolar H+transporting two-sector ATPase F subunit K02122 ATPVF; V/A-type H+/Na+-transporting ATPase subunit F
D Clole_1360 V-type ATPase 116 kDa subunit K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I
D Clole_1361 H+transporting two-sector ATPase C subunit K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K
D Clole_1085 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cle00680]
D Clole_1269 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Clole_0256 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Clole_2829 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clole_1453 fructose-1,6-bisphosphate aldolase, class II K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Clole_2999 Fructose-bisphosphatase K04041 fbp3; fructose-1,6-bisphosphatase III [EC:3.1.3.11]
D Clole_2584 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clole_2600 Diphosphate--fructose-6-phosphate 1-phosphotransferase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90]
D Clole_2315 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Clole_2316 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Clole_4160 Pyruvate synthase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Clole_4159 Pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Clole_4162 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Clole_4161 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
D Clole_2832 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Clole_1611 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Clole_2083 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clole_2082 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Clole_3957 Haloacid dehalogenase domain protein hydrolase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 00910 Nitrogen metabolism [PATH:cle00910]
D Clole_2524 Ferredoxin--nitrite reductase K00366 nirA; ferredoxin-nitrite reductase [EC:1.7.7.1]
D Clole_0455 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Clole_0456 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Clole_0452 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Clole_0367 Nitrogenase K02588 nifH; nitrogenase iron protein NifH
D Clole_2705 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Clole_1194 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Clole_3057 2-nitropropane dioxygenase NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D Clole_2181 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Clole_2194 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4238 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4245 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4244 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Clole_0612 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Clole_4243 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Clole_0136 Glutamate synthase (NADPH) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Clole_0293 transcriptional regulator, XRE family K01725 cynS; cyanate lyase [EC:4.2.1.104]
D Clole_3419 carbonic anhydrase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cle00920]
D Clole_0045 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Clole_0046 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Clole_0047 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Clole_0048 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Clole_4035 nitrogenase cofactor biosynthesis protein NifB K15553 ssuA; sulfonate transport system substrate-binding protein
D Clole_4037 ABC-type transporter, integral membrane subunit K15554 ssuC; sulfonate transport system permease protein
D Clole_4036 Taurine-transporting ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Clole_0052 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Clole_0051 Sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Clole_1254 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D Clole_0049 fumarate reductase/succinate dehydrogenase flavoprotein domain protein K00394 aprA; adenylylsulfate reductase, subunit A [EC:1.8.99.2]
D Clole_0050 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein K00395 aprB; adenylylsulfate reductase, subunit B [EC:1.8.99.2]
D Clole_0053 Ferredoxin--nitrite reductase K00392 sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
D Clole_1347 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clole_1507 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clole_1686 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Clole_4171 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Clole_1506 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Clole_2882 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cle00061]
D Clole_3045 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Clole_3049 acetyl-CoA carboxylase, biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Clole_3047 acetyl-CoA carboxylase, biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Clole_3046 acetyl-CoA carboxylase, carboxyl transferase, beta subunit K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Clole_2311 acyl carrier protein K02078 acpP; acyl carrier protein
D Clole_3054 acyl carrier protein K02078 acpP; acyl carrier protein
D Clole_3879 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D Clole_3052 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Clole_3652 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain-containing protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Clole_3055 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Clole_3050 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Clole_3507 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clole_3051 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clole_3048 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Clole_3053 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Clole_3880 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cle00071]
D Clole_3880 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clole_0779 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_3867 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis [PATH:cle00121]
D Clole_2713 Choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cle00561]
D Clole_0256 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clole_0474 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Clole_2312 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Clole_1988 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Clole_2290 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Clole_2163 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Clole_3640 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Clole_2186 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Clole_0152 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Clole_3084 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D Clole_3366 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Clole_3367 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Clole_3326 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:cle00564]
D Clole_2289 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Clole_1988 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Clole_2290 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Clole_2163 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Clole_3640 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Clole_0176 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Clole_0890 glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D Clole_4093 Ethanolamine utilization EutA K04019 eutA; ethanolamine utilization protein EutA
D Clole_4092 Ethanolamine ammonia-lyase K03735 eutB; ethanolamine ammonia-lyase large subunit [EC:4.3.1.7]
D Clole_4091 Ethanolamine ammonia-lyase K03736 eutC; ethanolamine ammonia-lyase small subunit [EC:4.3.1.7]
D Clole_2422 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Clole_2160 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Clole_4015 CDP-alcohol phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Clole_0402 HAD-superfamily hydrolase, subfamily IB (PSPase-like) K18697 pgpC; phosphatidylglycerophosphatase C [EC:3.1.3.27]
D Clole_3638 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Clole_3847 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Clole_2908 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Clole_2704 Glycerol-1-phosphate dehydrogenase (NAD(P)(+)) K00096 araM; glycerol-1-phosphate dehydrogenase [NAD(P)+] [EC:1.1.1.261]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:cle00600]
D Clole_0250 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Clole_3323 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Clole_0249 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Clole_3366 glycoside hydrolase clan GH-D K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Clole_3367 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D Clole_3326 Alpha-galactosidase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cle00230]
D Clole_1597 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Clole_2277 phosphopentomutase K01839 deoB; phosphopentomutase [EC:5.4.2.7]
D Clole_4133 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Clole_1541 phosphoribosyltransferase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Clole_1101 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Clole_1468 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Clole_1571 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Clole_1471 phosphoribosylamine/glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Clole_1470 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Clole_1465 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D Clole_1469 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Clole_3489 ATP-dependent carboxylate-amine ligase domain protein ATP-grasp K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D Clole_3961 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Clole_1466 phosphoribosylaminoimidazole carboxylase, catalytic subunit K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Clole_1467 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Clole_2465 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Clole_3207 Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Clole_3208 Inosine monophosphate cyclohydrolase-like protein K11176 purO; IMP cyclohydrolase [EC:3.5.4.10]
D Clole_2545 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Clole_0636 hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Clole_1431 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Clole_1201 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Clole_2292 Multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Clole_1905 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Clole_3383 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Clole_3329 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Clole_4236 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Clole_0441 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Clole_1115 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Clole_3216 xanthine phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D Clole_3328 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Clole_1770 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Clole_3131 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Clole_3130 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Clole_1692 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Clole_2017 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Clole_2020 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Clole_2355 deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D Clole_2544 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Clole_2883 RelA/SpoT domain protein K07816 E2.7.6.5; GTP pyrophosphokinase [EC:2.7.6.5]
D Clole_1117 adenylate cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Clole_1086 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Clole_0342 adenosine deaminase K01488 add; adenosine deaminase [EC:3.5.4.4]
D Clole_1804 adenine deaminase K01486 ade; adenine deaminase [EC:3.5.4.2]
D Clole_3240 5'-Nucleotidase domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Clole_3525 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Clole_1107 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Clole_4209 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
D Clole_0052 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Clole_0051 Sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:cle00240]
D Clole_1815 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clole_0264 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clole_1814 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Clole_1811 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Clole_1812 dihydroorotase, multifunctional complex type K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Clole_1817 dihydroorotate dehydrogenase family protein K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Clole_1816 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Clole_1818 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Clole_1813 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Clole_2425 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Clole_0441 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Clole_1107 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Clole_2092 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Clole_1051 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Clole_2263 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Clole_1142 hypothetical protein K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Clole_1642 uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Clole_2350 phosphoribulokinase/uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D Clole_0636 hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Clole_1201 protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2]
D Clole_3684 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Clole_2280 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Clole_3240 5'-Nucleotidase domain-containing protein K01119 cpdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6]
D Clole_2276 pyrimidine-nucleoside phosphorylase K00756 pdp; pyrimidine-nucleoside phosphorylase [EC:2.4.2.2]
D Clole_2059 cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D Clole_1291 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Clole_1692 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Clole_2017 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Clole_2020 anaerobic ribonucleoside-triphosphate reductase K21636 nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]
D Clole_3131 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Clole_3130 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Clole_3132 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Clole_3030 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Clole_2019 deoxyUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Clole_1809 thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D Clole_0609 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Clole_0545 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Clole_0544 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Clole_0546 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cle00250]
D Clole_3433 Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Clole_1592 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Clole_2480 Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Clole_1688 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D Clole_3703 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Clole_1047 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Clole_2227 aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D Clole_2508 Acetylornithine transaminase K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40]
D Clole_2472 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Clole_2473 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Clole_1086 adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Clole_2465 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Clole_1811 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Clole_4244 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Clole_0612 glutamate synthase (NADPH), homotetrameric K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Clole_4243 glutamate synthase, NADH/NADPH, small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Clole_0136 Glutamate synthase (NADPH) K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D Clole_2181 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Clole_2194 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4238 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4245 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_1815 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clole_0264 carbamoyl-phosphate synthase, large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Clole_1814 carbamoyl-phosphate synthase, small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Clole_2038 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Clole_1468 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Clole_1571 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cle00260]
D Clole_2153 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clole_1612 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clole_0587 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clole_4226 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clole_1610 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Clole_1613 homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D Clole_1355 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Clole_3099 aromatic amino acid beta-eliminating lyase/threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D Clole_1269 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Clole_0256 Hydroxypyruvate reductase K11529 gck; glycerate 2-kinase [EC:2.7.1.165]
D Clole_2832 phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Clole_1611 proposed homoserine kinase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Clole_2083 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clole_2082 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Clole_3957 Haloacid dehalogenase domain protein hydrolase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
D Clole_2508 Acetylornithine transaminase K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40]
D Clole_2661 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Clole_2662 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Clole_1893 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Clole_1894 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Clole_1253 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Clole_3954 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D Clole_0707 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Clole_0706 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Clole_3906 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cle00270]
D Clole_1347 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clole_1507 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clole_1686 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Clole_4171 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Clole_1506 Cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Clole_4170 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Clole_0470 Cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Clole_2700 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clole_3632 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clole_3603 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Clole_1385 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Clole_1384 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Clole_1552 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Clole_1057 MTA/SAH nucleosidase K01243 mtnN; adenosylhomocysteine nucleosidase [EC:3.2.2.9]
D Clole_2292 Multi-copper polyphenol oxidoreductase, laccase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Clole_2703 2,3-diketo-5-methylthio-1-phosphopentane phosphatase K08966 mtnX; 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [EC:3.1.3.87]
D Clole_0732 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0231 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0233 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_1843 DNA-cytosine methyltransferase K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
D Clole_2992 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Clole_2153 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clole_1612 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clole_0587 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clole_4226 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clole_1610 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Clole_2882 Homoserine O-succinyltransferase K00651 metA; homoserine O-succinyltransferase/O-acetyltransferase [EC:2.3.1.46 2.3.1.31]
D Clole_4151 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Clole_0158 O-acetylhomoserine/O-acetylserine sulfhydrylase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Clole_2849 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clole_2508 Acetylornithine transaminase K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40]
D Clole_1003 glutamate/cysteine ligase,/amino acid ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Clole_3433 Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Clole_1690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Clole_2227 aspartate 4-decarboxylase K09758 asdA; aspartate 4-decarboxylase [EC:4.1.1.12]
D Clole_3954 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D Clole_2661 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Clole_2662 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Clole_1893 L-serine dehydratase, iron-sulfur-dependent, beta subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Clole_1894 L-serine dehydratase, iron-sulfur-dependent, alpha subunit K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D Clole_2083 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clole_2082 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:cle00280]
D Clole_2849 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clole_2508 Acetylornithine transaminase K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cle00290]
D Clole_1253 threonine dehydratase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Clole_2852 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Clole_2850 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Clole_2847 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_2859 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_1708 Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_2858 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Clole_2857 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Clole_2848 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Clole_2849 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clole_0110 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Clole_2855 2-isopropylmalate synthase/homocitrate synthase family protein K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Clole_2856 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cle00300]
D Clole_1610 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Clole_2153 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clole_1612 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clole_0587 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clole_4226 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clole_2955 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Clole_2633 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Clole_2956 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Clole_1393 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Clole_4247 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Clole_2032 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Clole_4248 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Clole_2887 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Clole_2654 diaminopimelate dehydrogenase K03340 dapdh; diaminopimelate dehydrogenase [EC:1.4.1.16]
D Clole_1458 putative transcriptional regulator, GntR family K05825 LYSN; 2-aminoadipate transaminase [EC:2.6.1.-]
D Clole_2334 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Clole_1573 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Clole_2333 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cle00310]
D Clole_3954 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:cle00220]
D Clole_2081 Ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Clole_2472 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Clole_2473 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Clole_0431 urea carboxylase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
D Clole_0432 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Clole_2194 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4238 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4245 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_2181 Glutamate dehydrogenase (NADP(+)) K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D Clole_3433 Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Clole_1391 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Clole_1392 acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Clole_3850 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Clole_1393 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cle00330]
D Clole_1291 Cytosine deaminase K01485 codA; cytosine/creatinine deaminase [EC:3.5.4.1 3.5.4.21]
D Clole_1551 Arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Clole_1383 agmatinase K01480 speB; agmatinase [EC:3.5.3.11]
D Clole_1384 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Clole_1552 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Clole_1385 S-adenosylmethionine decarboxylase proenzyme K01611 speD; S-adenosylmethionine decarboxylase [EC:4.1.1.50]
D Clole_1554 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clole_3801 GCN5-related N-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D Clole_1602 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Clole_2383 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Clole_2984 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
D Clole_1963 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Clole_3433 Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:cle00340]
D Clole_2490 ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Clole_2491 histidyl-tRNA synthetase 2 K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Clole_2481 phosphoribosyl-ATP diphosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D Clole_2483 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Clole_2484 Imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Clole_2482 imidazoleglycerol phosphate synthase, cyclase subunit K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Clole_2485 Imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Clole_2488 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Clole_2976 histidinol phosphate phosphatase HisJ family K04486 E3.1.3.15B; histidinol-phosphatase (PHP family) [EC:3.1.3.15]
D Clole_2489 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00350 Tyrosine metabolism [PATH:cle00350]
D Clole_3433 Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Clole_2488 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Clole_0779 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_3867 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00360 Phenylalanine metabolism [PATH:cle00360]
D Clole_0772 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Clole_4163 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Clole_0771 Phenylacetate--CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Clole_2040 phenylacetic acid degradation-related protein K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D Clole_3433 Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Clole_2488 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Clole_1714 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00380 Tryptophan metabolism [PATH:cle00380]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clole_2655 Catalase K03781 katE; catalase [EC:1.11.1.6]
D Clole_0145 Catalase K03781 katE; catalase [EC:1.11.1.6]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cle00400]
D Clole_0253 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Clole_0662 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Clole_4211 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Clole_0550 3-dehydroquinate dehydratase, type I K03785 aroD; 3-dehydroquinate dehydratase I [EC:4.2.1.10]
D Clole_0687 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Clole_1732 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Clole_0533 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Clole_2901 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Clole_0701 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Clole_0702 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Clole_0703 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Clole_0705 Phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Clole_0704 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Clole_0707 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Clole_0706 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Clole_3906 tryptophan synthase, beta subunit K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Clole_0663 Prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Clole_2264 chorismate mutase K06208 aroH; chorismate mutase [EC:5.4.99.5]
D Clole_1609 amino acid-binding ACT domain protein K06209 pheB; chorismate mutase [EC:5.4.99.5]
D Clole_2602 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Clole_3433 Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Clole_2488 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cle00410]
D Clole_0538 Acetylornithine transaminase K25571 pydD; beta-alanine---2-oxoglutarate transaminase [EC:2.6.1.120]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clole_1157 Pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Clole_0545 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Clole_0544 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Clole_0546 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
C 00430 Taurine and hypotaurine metabolism [PATH:cle00430]
D Clole_2316 phosphate acetyltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Clole_2315 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism [PATH:cle00440]
D Clole_3577 phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
D Clole_3575 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00450 Selenocompound metabolism [PATH:cle00450]
D Clole_4170 Cys/Met metabolism pyridoxal-phosphate-dependent protein K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Clole_0470 Cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Clole_2700 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clole_3632 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clole_3284 cysteine desulfurase, SufS subfamily K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D Clole_0334 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Clole_1895 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Clole_0265 Thioredoxin-disulfide reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Clole_4027 alkyl hydroperoxide reductase F subunit K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Clole_0052 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Clole_0051 Sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Clole_0629 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:cle00460]
D Clole_2594 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_0676 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_1639 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_0559 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_3150 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
D Clole_2480 Asparaginase K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D Clole_1688 aspartate/ammonia ligase K01914 asnA; aspartate--ammonia ligase [EC:6.3.1.1]
D Clole_1269 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cle00470]
D Clole_3017 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Clole_1161 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clole_3829 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clole_3954 aspartate racemase K25316 racX; amino-acid racemase [EC:5.1.1.10]
D Clole_1678 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Clole_2331 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Clole_4247 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Clole_2887 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cle00480]
D Clole_1003 glutamate/cysteine ligase,/amino acid ligase K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2]
D Clole_3040 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Clole_2070 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Clole_1384 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
D Clole_1552 spermidine synthase K00797 speE; spermidine synthase [EC:2.5.1.16]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis [PATH:cle00515]
D Clole_0635 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00514 Other types of O-glycan biosynthesis [PATH:cle00514]
D Clole_0635 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:cle00511]
D Clole_0250 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Clole_3323 Beta-galactosidase K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Clole_0249 glycoside hydrolase family 2 TIM barrel K01190 lacZ; beta-galactosidase [EC:3.2.1.23]
D Clole_3117 Beta-mannosidase K01192 E3.2.1.25; beta-mannosidase [EC:3.2.1.25]
D Clole_1009 Alpha-L-fucosidase K15923 AXY8; alpha-L-fucosidase 2 [EC:3.2.1.51]
C 00540 Lipopolysaccharide biosynthesis
C 00542 O-Antigen repeat unit biosynthesis [PATH:cle00542]
D Clole_3685 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cle00541]
D Clole_3827 UTP-glucose-1-phosphate uridylyltransferase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Clole_2968 UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clole_1711 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clole_1713 NAD-dependent epimerase/dehydratase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Clole_3792 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Clole_3798 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clole_3797 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Clole_0373 dTDP-4-dehydrorhamnose 35-epimerase related protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Clole_3559 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D Clole_1706 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Clole_1707 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D Clole_1705 DegT/DnrJ/EryC1/StrS aminotransferase K12452 ascC; CDP-4-dehydro-6-deoxyglucose reductase, E1 [EC:1.17.1.1]
D Clole_3360 mannose-6-phosphate isomerase, class I K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D Clole_3817 Mannose-1-phosphate guanylyltransferase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Clole_3816 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Clole_3815 GDP-mannose 4,6-dehydratase K15856 rmd; GDP-4-dehydro-6-deoxy-D-mannose reductase [EC:1.1.1.281]
D Clole_3813 Glutamine--scyllo-inositol transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Clole_3584 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Clole_1100 UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Clole_3629 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
C 00550 Peptidoglycan biosynthesis [PATH:cle00550]
D Clole_3771 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Clole_2329 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Clole_2926 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Clole_1095 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Clole_2331 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Clole_2334 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Clole_1573 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Clole_1161 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clole_3829 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clole_2333 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Clole_2423 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Clole_3265 Di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Clole_2970 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Clole_3331 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Clole_2332 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Clole_1049 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Clole_2193 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clole_1276 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clole_2097 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Clole_2525 Penicillin-binding protein dimerization domain protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Clole_2335 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Clole_2336 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Clole_2376 penicillin-binding protein transpeptidase K05364 pbpA; penicillin-binding protein A
D Clole_2115 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_2272 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_2275 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_3921 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_0855 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_2165 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_0320 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_1512 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
C 00552 Teichoic acid biosynthesis [PATH:cle00552]
D Clole_2970 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Clole_3331 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Clole_3685 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Clole_3500 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Clole_3505 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Clole_3509 cell envelope-related transcriptional attenuator K01005 tagT_U_V; polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase [EC:2.7.8.-]
D Clole_3084 sulfatase K19005 ltaS; lipoteichoic acid synthase [EC:2.7.8.20]
D Clole_2186 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Clole_0152 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Clole_0621 glycosyl transferase group 1 K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cle00543]
D Clole_3685 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D Clole_3068 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Clole_1001 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Clole_3610 membrane bound O-acyl transferase MBOAT family protein K19294 algI; alginate O-acetyltransferase complex protein AlgI
D Clole_1347 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Clole_1507 Serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cle00730]
D Clole_1158 thiamine biosynthesis protein ThiC K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Clole_3146 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Clole_2841 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2135 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2254 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2136 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Clole_2658 biotin and thiamin synthesis associated K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Clole_1750 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Clole_3148 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Clole_3147 Thiamine-phosphate pyrophosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Clole_1780 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Clole_4206 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Clole_3865 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Clole_1782 thiamine pyrophosphokinase K00949 thiN; thiamine pyrophosphokinase [EC:2.7.6.2]
D Clole_3525 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cle00740]
D Clole_2715 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Clole_2717 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Clole_2714 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Clole_2716 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Clole_2411 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Clole_3148 Hydroxyethylthiazole kinase K00878 thiM; hydroxyethylthiazole kinase [EC:2.7.1.50]
D Clole_1597 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Clole_2505 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cle00750]
D Clole_3910 Phosphomethylpyrimidine kinase type-1 K00868 pdxK; pyridoxine kinase [EC:2.7.1.35]
D Clole_2082 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Clole_1355 threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Clole_0477 pyridoxine biosynthesis protein K06215 pdxS; pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]
D Clole_0478 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 K08681 pdxT; pyridoxal 5'-phosphate synthase pdxT subunit [EC:4.3.3.6]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cle00760]
D Clole_1592 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Clole_1591 quinolinate synthetase complex, A subunit K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Clole_1593 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Clole_3641 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Clole_1431 purine nucleoside phosphorylase K03784 deoD; purine-nucleoside phosphorylase [EC:2.4.2.1]
D Clole_3928 cytidyltransferase-related domain protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D Clole_0636 hypothetical protein K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D Clole_2112 metal dependent phosphohydrolase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Clole_1107 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Clole_3231 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22]
D Clole_2237 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Clole_1543 NAD+ synthetase K01950 E6.3.5.1; NAD+ synthase (glutamine-hydrolysing) [EC:6.3.5.1]
D Clole_1540 isochorismatase hydrolase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Clole_1542 Nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
D Clole_2517 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D Clole_1752 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cle00770]
D Clole_2847 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_2859 acetolactate synthase, large subunit, biosynthetic type K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_1708 Acetolactate synthase K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Clole_2858 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Clole_2857 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Clole_2848 dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Clole_1544 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Clole_1157 Pantoate-beta-alanine ligase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Clole_3377 putative transcriptional acitvator, Baf family K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Clole_3378 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Clole_1107 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Clole_1788 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Clole_2064 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Clole_3021 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Clole_3877 phosphopantetheine-protein transferase K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D Clole_2849 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clole_0545 dihydroorotate dehydrogenase family protein K17723 preA; dihydropyrimidine dehydrogenase (NAD+) subunit PreA [EC:1.3.1.1]
D Clole_0544 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Clole_0546 amidase, hydantoinase/carbamoylase family K06016 pydC; beta-ureidopropionase / N-carbamoyl-L-amino-acid hydrolase [EC:3.5.1.6 3.5.1.87]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:cle00780]
D Clole_3050 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Clole_3507 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clole_3051 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clole_3048 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Clole_2657 Radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D Clole_0350 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Clole_3381 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism
C 00790 Folate biosynthesis [PATH:cle00790]
D Clole_3865 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Clole_0608 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Clole_3872 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Clole_2715 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Clole_3463 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Clole_0285 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Clole_0336 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Clole_2575 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
C 00670 One carbon pool by folate [PATH:cle00670]
D Clole_0608 Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D Clole_2157 Formate--tetrahydrofolate ligase K01938 fhs; formate--tetrahydrofolate ligase [EC:6.3.4.3]
D Clole_2158 Methylenetetrahydrofolate dehydrogenase (NADP(+)) K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Clole_1269 Glycine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Clole_1470 phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Clole_3207 Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Clole_1774 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Clole_2700 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clole_3632 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clole_0609 Thymidylate synthase thyX K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Clole_3634 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cle00860]
D Clole_1401 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clole_3657 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Clole_3653 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Clole_3654 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Clole_3656 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Clole_0035 flavodoxin/nitric oxide synthase K00230 hemG; menaquinone-dependent protoporphyrinogen oxidase [EC:1.3.5.3]
D Clole_3655 uroporphyrin-III C-methyltransferase K13542 cobA-hemD; uroporphyrinogen III methyltransferase / synthase [EC:2.1.1.107 4.2.1.75]
D Clole_1808 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Clole_3658 Sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Clole_3424 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Clole_2957 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Clole_3425 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Clole_3423 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Clole_3417 Adenosylcobinamide-phosphate guanylyltransferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Clole_3416 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Clole_3418 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Clole_1807 Phosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73]
D Clole_3422 aminotransferase class I and II K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D Clole_4086 cobalamin adenosyltransferase K04032 eutT; ethanolamine utilization cobalamin adenosyltransferase [EC:2.5.1.154]
D Clole_0439 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07226 hutZ; heme oxygenase (biliverdin-IX-beta and delta-forming) [EC:1.14.99.58]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cle00130]
D Clole_2506 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Clole_2507 menaquinone biosynthesis decarboxylase, SCO4490 family K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Clole_2505 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Clole_0859 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Clole_2217 hypothetical protein K09834 VTE1; tocopherol cyclase [EC:5.5.1.24]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cle00900]
D Clole_1750 deoxyxylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Clole_2421 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Clole_3339 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Clole_4135 4-diphosphocytidyl-2C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Clole_3000 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Clole_2419 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Clole_2262 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Clole_2505 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Clole_1747 Farnesyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Clole_2423 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Clole_3265 Di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:cle00906]
D Clole_0362 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D Clole_4057 phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation [PATH:cle00903]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clole_0846 hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00907 Pinene, camphor and geraniol degradation
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Clole_0569 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Clole_3482 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cle00523]
D Clole_3798 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clole_3797 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Clole_0373 dTDP-4-dehydrorhamnose 35-epimerase related protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Clole_3797 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids [PATH:cle00946]
D Clole_2594 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_0676 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_1639 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_0559 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_3150 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D Clole_0068 copper amine oxidase-like domain-containing protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis [PATH:cle00332]
D Clole_2383 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Clole_2984 gamma-glutamyl phosphate reductase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cle00261]
D Clole_0052 sulfate adenylyltransferase, large subunit K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D Clole_0051 Sulfate adenylyltransferase K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D Clole_2153 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clole_1612 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Clole_0587 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clole_4226 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Clole_2955 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Clole_2633 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Clole_2956 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cle00521]
D Clole_1649 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
D Clole_4133 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Clole_3798 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clole_3797 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Clole_0373 dTDP-4-dehydrorhamnose 35-epimerase related protein K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Clole_1649 glucokinase, ROK family K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cle00525]
D Clole_3798 glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Clole_3797 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cle00401]
D Clole_2602 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Clole_3433 Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Clole_2488 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Clole_0701 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Clole_0702 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Clole_3052 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Clole_3507 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clole_3051 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics [PATH:cle00998]
D Clole_2311 acyl carrier protein K02078 acpP; acyl carrier protein
D Clole_3054 acyl carrier protein K02078 acpP; acyl carrier protein
D Clole_3879 phosphopantetheine-binding protein K02078 acpP; acyl carrier protein
D Clole_3577 phosphoenolpyruvate phosphomutase K23999 fom1; phosphoenolpyruvate phosphomutase / 2-hydroxyethylphosphonate cytidylyltransferase [EC:5.4.2.9 2.7.7.104]
D Clole_3575 phosphonopyruvate decarboxylase K09459 E4.1.1.82; phosphonopyruvate decarboxylase [EC:4.1.1.82]
C 00999 Biosynthesis of various plant secondary metabolites [PATH:cle00999]
D Clole_3603 S-adenosylmethionine synthetase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Clole_0687 shikimate 5-dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25]
D Clole_2594 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_0676 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_1639 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_0559 Beta-glucosidase K05349 bglX; beta-glucosidase [EC:3.2.1.21]
D Clole_3150 beta-galactosidase K05350 bglB; beta-glucosidase [EC:3.2.1.21]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cle00362]
D Clole_1714 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
D Clole_2003 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clole_2267 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clole_2268 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Clole_2269 sodium pump decarboxylase, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
C 00627 Aminobenzoate degradation
D Clole_2505 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation [PATH:cle00625]
D Clole_0779 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_3867 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_2175 Aldehyde Dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D Clole_0456 Nitrogenase K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Clole_0452 nitrogenase iron protein K02588 nifH; nitrogenase iron protein NifH
D Clole_0367 Nitrogenase K02588 nifH; nitrogenase iron protein NifH
D Clole_0455 nitrogenase molybdenum-iron protein alpha chain K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D Clole_1714 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00633 Nitrotoluene degradation
D Clole_4160 Pyruvate synthase K00169 porA; pyruvate ferredoxin oxidoreductase alpha subunit [EC:1.2.7.1]
D Clole_4159 Pyruvate synthase K00170 porB; pyruvate ferredoxin oxidoreductase beta subunit [EC:1.2.7.1]
D Clole_4162 pyruvate/ketoisovalerate oxidoreductase, gamma subunit K00172 porC; pyruvate ferredoxin oxidoreductase gamma subunit [EC:1.2.7.1]
D Clole_4161 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit K00171 porD; pyruvate ferredoxin oxidoreductase delta subunit [EC:1.2.7.1]
C 00642 Ethylbenzene degradation
C 00643 Styrene degradation
C 00791 Atrazine degradation [PATH:cle00791]
D Clole_0432 allophanate hydrolase K01457 atzF; allophanate hydrolase [EC:3.5.1.54]
D Clole_0431 urea carboxylase K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6]
C 00930 Caprolactam degradation
D Clole_0846 hypothetical protein K14731 mlhB; epsilon-lactone hydrolase [EC:3.1.1.83]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D Clole_1714 pyruvate carboxyltransferase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39]
C 00626 Naphthalene degradation [PATH:cle00626]
D Clole_0779 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
D Clole_3867 Acetaldehyde dehydrogenase (acetylating) K04072 adhE; acetaldehyde dehydrogenase / alcohol dehydrogenase [EC:1.2.1.10 1.1.1.1]
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cle03020]
D Clole_3556 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Clole_3555 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Clole_3517 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Clole_1771 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
D Clole_3704 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cle03010]
D Clole_2427 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Clole_3540 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Clole_3518 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Clole_3529 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Clole_1071 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Clole_3550 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Clole_3532 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Clole_3510 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Clole_3547 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Clole_3519 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Clole_3551 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Clole_3520 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Clole_3533 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Clole_2410 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Clole_2305 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Clole_3537 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Clole_1073 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Clole_3542 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Clole_2122 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Clole_2167 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Clole_3563 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Clole_3543 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Clole_3546 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Clole_3545 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Clole_3534 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Clole_3531 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Clole_3557 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Clole_1076 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Clole_3558 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Clole_3564 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Clole_3511 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Clole_3536 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Clole_3527 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Clole_3539 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Clole_3516 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Clole_3530 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Clole_2301 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Clole_2945 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Clole_2107 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Clole_3541 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Clole_3544 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Clole_3535 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Clole_3936 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Clole_2109 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Clole_1783 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Clole_3538 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Clole_3528 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Clole_1627 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Clole_2313 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Clole_4273 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Clole_2946 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Clole_3521 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Clole_3552 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D Clole_R0021 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0053 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0058 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0075 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0062 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0141 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0036 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0018 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0126 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0079 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0137 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0024 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0061 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0064 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0054 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0041 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0065 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0059 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0140 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0076 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0063 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0034 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cle00970]
D Clole_R0004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0078 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0138 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0017 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0112 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0128 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0129 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0093 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0087 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0072 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0080 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0083 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0125 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0121 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0136 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clole_R0119 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clole_R0132 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clole_R0046 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clole_R0082 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Clole_R0084 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Clole_R0027 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clole_R0056 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clole_R0089 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clole_R0094 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clole_R0081 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0135 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0099 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0114 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0026 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0039 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0067 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0086 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0092 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0020 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0066 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0055 tRNA-His K14226 tRNA-His; tRNA His
D Clole_R0088 tRNA-His K14226 tRNA-His; tRNA His
D Clole_R0032 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clole_R0077 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clole_R0139 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clole_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0068 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0091 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0111 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0098 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0097 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0069 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0070 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0113 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0012 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0101 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0045 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0117 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0122 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0145 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0085 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0010 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0051 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0133 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0011 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Clole_R0052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Clole_R0108 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Clole_R0096 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0044 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0116 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0073 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0142 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0143 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0103 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0134 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0127 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0106 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0104 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0120 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Clole_R0124 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Clole_R0050 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Clole_R0107 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Clole_R0009 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Clole_R0131 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0144 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0047 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0123 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0007 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0118 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_1401 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clole_4241 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Clole_4240 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Clole_4242 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Clole_1334 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Clole_2166 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Clole_1008 Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Clole_1149 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Clole_4239 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Clole_2579 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Clole_2359 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Clole_2948 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Clole_0132 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Clole_0849 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Clole_1348 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Clole_0629 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Clole_1774 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Clole_1928 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Clole_1316 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Clole_3647 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Clole_3374 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Clole_4264 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Clole_4229 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Clole_1148 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Clole_2597 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Clole_2596 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Clole_2072 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Clole_2991 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cle03060]
D Clole_3526 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Clole_3566 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Clole_2827 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Clole_2562 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Clole_2561 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Clole_3479 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Clole_2899 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Clole_4270 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Clole_3409 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Clole_2306 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Clole_R0074 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Clole_2308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Clole_4176 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clole_4178 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clole_2297 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Clole_2298 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Clole_2299 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Clole_2282 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cle04122]
D Clole_2841 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2135 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2254 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2839 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Clole_2575 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Clole_2136 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cle03018]
D Clole_2829 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clole_2409 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Clole_2826 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Clole_0607 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_2520 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_1379 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_2605 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_0097 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Clole_1626 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Clole_2466 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Clole_2143 Ribocuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Clole_1821 Ribocuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Clole_2584 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clole_2129 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clole_3332 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clole_2241 RNA chaperone Hfq K03666 hfq; host factor-I protein
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cle03030]
D Clole_0717 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_1693 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_2585 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clole_2523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Clole_1030 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Clole_0013 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clole_2121 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clole_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clole_1077 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Clole_2354 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Clole_1072 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_0945 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_2631 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Clole_4148 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Clole_2296 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Clole_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clole_2985 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cle03410]
D Clole_3334 DNA-(apurinic or apyrimidinic site) lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D Clole_2185 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Clole_1687 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Clole_3616 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Clole_3635 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Clole_0389 DNA glycosylase/AP lyase, H2TH DNA-binding protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Clole_3028 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Clole_1250 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Clole_3506 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Clole_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clole_1346 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Clole_2985 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cle03420]
D Clole_1104 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Clole_1645 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Clole_4106 ABC transporter related protein K03701 uvrA; excinuclease ABC subunit A
D Clole_1638 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Clole_1647 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D Clole_2230 Excinuclease ABC C subunit domain protein K03703 uvrC; excinuclease ABC subunit C
D Clole_2987 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_2188 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_4201 ATP-dependent DNA helicase replicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_0395 viral RNA helicase 1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_3175 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_2257 DNA polymerase III, epsilon subunit K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_0225 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clole_2985 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Clole_3704 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
C 03430 Mismatch repair [PATH:cle03430]
D Clole_2244 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Clole_0921 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS
D Clole_1939 MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2
D Clole_3903 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Clole_2243 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Clole_2987 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_2188 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_4201 ATP-dependent DNA helicase replicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_0395 viral RNA helicase 1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_3175 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_2257 DNA polymerase III, epsilon subunit K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_0225 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_1745 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Clole_1746 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Clole_1346 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Clole_1072 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_0945 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_2631 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Clole_2585 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clole_2523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Clole_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clole_1030 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Clole_2121 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clole_0013 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clole_0717 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_1693 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_2985 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cle03440]
D Clole_1346 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Clole_1072 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_0945 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_2631 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Clole_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Clole_2062 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Clole_1032 Recombination protein recR K06187 recR; recombination protein RecR
D Clole_2467 recA protein K03553 recA; recombination protein RecA
D Clole_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clole_2381 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Clole_2380 Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Clole_1786 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clole_2403 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clole_3024 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Clole_3601 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Clole_2585 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clole_2523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Clole_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clole_1030 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Clole_2121 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clole_0013 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clole_0717 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_1693 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_1772 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cle02010]
D Clole_0045 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Clole_0046 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Clole_0047 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Clole_0048 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Clole_4035 nitrogenase cofactor biosynthesis protein NifB K15553 ssuA; sulfonate transport system substrate-binding protein
D Clole_4037 ABC-type transporter, integral membrane subunit K15554 ssuC; sulfonate transport system permease protein
D Clole_4036 Taurine-transporting ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Clole_0449 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Clole_0450 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Clole_0451 Fe(3+)-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Clole_0511 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Clole_0513 ABC-type transporter, integral membrane subunit K02011 afuB; iron(III) transport system permease protein
D Clole_0512 Fe(3+)-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Clole_2932 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Clole_0388 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Clole_2933 ABC-type transporter, integral membrane subunit K11070 potC; spermidine/putrescine transport system permease protein
D Clole_2934 ABC-type transporter, integral membrane subunit K11071 potB; spermidine/putrescine transport system permease protein
D Clole_2935 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Clole_0191 ABC-type glycine betaine transport, periplasmic subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D Clole_0190 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Clole_3499 Glycerol-3-phosphate-transporting ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Clole_1932 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_0690 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_2974 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_0496 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_0299 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_1930 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_2973 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_0300 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_0691 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_2972 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_1931 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_0301 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_0692 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_2589 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_0572 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_2048 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_3312 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_3408 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_3689 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_3982 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_0246 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_2588 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Clole_0573 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Clole_3311 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Clole_0247 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Clole_3310 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_2587 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_0574 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_3406 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_0248 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_1222 extracellular solute-binding protein family 1 K10192 togB; oligogalacturonide transport system substrate-binding protein
D Clole_1223 extracellular solute-binding protein family 1 K10192 togB; oligogalacturonide transport system substrate-binding protein
D Clole_1224 ABC-type transporter, integral membrane subunit K10193 togM; oligogalacturonide transport system permease protein
D Clole_1225 ABC-type transporter, integral membrane subunit K10194 togN; oligogalacturonide transport system permease protein
D Clole_2053 Domain of unknown function DUF3502 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Clole_1012 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Clole_0524 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Clole_0312 Domain of unknown function DUF3502 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Clole_1010 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein
D Clole_2051 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein
D Clole_0525 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein
D Clole_0526 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein
D Clole_1011 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein
D Clole_2052 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein
D Clole_1343 periplasmic sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D Clole_1345 ABC-type transporter, integral membrane subunit K10547 gguB; putative multiple sugar transport system permease protein
D Clole_1344 Monosaccharide-transporting ATPase K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Clole_0338 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clole_2553 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clole_1606 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clole_1607 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clole_1604 ABC-type transporter, integral membrane subunit K23535 nupB; general nucleoside transport system permease protein
D Clole_0340 ABC-type transporter, integral membrane subunit K23535 nupB; general nucleoside transport system permease protein
D Clole_0341 ABC-type transporter, integral membrane subunit K23536 nupC; general nucleoside transport system permease protein
D Clole_1603 ABC-type transporter, integral membrane subunit K23536 nupC; general nucleoside transport system permease protein
D Clole_1605 Monosaccharide-transporting ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D Clole_0339 Monosaccharide-transporting ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D Clole_1339 ABC-type sugar transport system periplasmic component-like protein K10439 rbsB; ribose transport system substrate-binding protein
D Clole_0506 periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D Clole_0509 ABC-type transporter, integral membrane subunit K23509 ytfT; galactofuranose transport system permease protein
D Clole_0508 ABC-type transporter, integral membrane subunit K23509 ytfT; galactofuranose transport system permease protein
D Clole_0507 Monosaccharide-transporting ATPase K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D Clole_1342 periplasmic binding protein/LacI transcriptional regulator K10543 xylF; D-xylose transport system substrate-binding protein
D Clole_0175 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Clole_0173 ABC-type transporter, integral membrane subunit K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Clole_0174 ABC-type transporter, integral membrane subunit K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Clole_1136 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clole_1137 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clole_1138 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Clole_1139 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Clole_1140 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Clole_3244 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D Clole_3241 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Clole_3242 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Clole_3243 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Clole_1237 ABC-type transporter, periplasmic subunit family 3 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D Clole_1239 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D Clole_1238 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D Clole_1236 Phosphonate-transporting ATPase K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Clole_3475 ABC-type transporter, periplasmic subunit family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Clole_3474 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D Clole_3473 Phosphate-transporting ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Clole_0648 ABC-type transporter, periplasmic subunit family 3 K17073 lysX1; putative lysine transport system substrate-binding protein
D Clole_0649 polar amino acid ABC transporter, inner membrane subunit K17074 lysX2; putative lysine transport system permease protein
D Clole_0650 Fe(3+)-transporting ATPase K17076 lysY; putative lysine transport system ATP-binding protein
D Clole_0464 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Clole_0915 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Clole_0465 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Clole_0916 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Clole_0466 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Clole_0917 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Clole_0467 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Clole_0918 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Clole_0468 Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Clole_0919 Phosphonate-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Clole_4166 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Clole_0380 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Clole_1590 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Clole_4167 ABC-type transporter, integral membrane subunit K02072 metI; D-methionine transport system permease protein
D Clole_0379 ABC-type transporter, integral membrane subunit K02072 metI; D-methionine transport system permease protein
D Clole_1589 ABC-type transporter, integral membrane subunit K02072 metI; D-methionine transport system permease protein
D Clole_4168 Phosphonate-transporting ATPase K02071 metN; D-methionine transport system ATP-binding protein
D Clole_0378 Phosphonate-transporting ATPase K02071 metN; D-methionine transport system ATP-binding protein
D Clole_1588 Phosphonate-transporting ATPase K02071 metN; D-methionine transport system ATP-binding protein
D Clole_1451 ABC-type transporter, periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein
D Clole_1447 ABC-type transporter, integral membrane subunit K15581 oppB; oligopeptide transport system permease protein
D Clole_1448 ABC-type transporter, integral membrane subunit K15582 oppC; oligopeptide transport system permease protein
D Clole_1449 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D Clole_1450 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D Clole_3252 ABC-type metal ion transporter, periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein
D Clole_3250 ABC-type transporter, integral membrane subunit K09816 znuB; zinc transport system permease protein
D Clole_3251 Phosphonate-transporting ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Clole_4219 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Clole_0094 ABC-type transporter, integral membrane subunit K16785 ecfT; energy-coupling factor transport system permease protein
D Clole_3513 ABC-type transporter, integral membrane subunit K16785 ecfT; energy-coupling factor transport system permease protein
D Clole_3515 Polyamine-transporting ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Clole_3514 Polyamine-transporting ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Clole_3073 ABC-2 type transporter K11051 cylB; multidrug/hemolysin transport system permease protein
D Clole_3074 Phosphonate-transporting ATPase K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D Clole_3812 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Clole_3811 Teichoic-acid-transporting ATPase K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Clole_0070 Abortive infection protein K09696 natB; sodium transport system permease protein
D Clole_0069 Phosphonate-transporting ATPase K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Clole_0361 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein
D Clole_0360 Polyamine-transporting ATPase K11631 bceA; bacitracin transport system ATP-binding protein
D Clole_0427 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein
D Clole_0426 Fe(3+)-transporting ATPase K19083 braD; bacitracin transport system ATP-binding protein
D Clole_3496 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Clole_3497 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Clole_0142 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D Clole_0141 Monosaccharide-transporting ATPase K16921 ytrB; acetoin utilization transport system ATP-binding protein
D Clole_3085 Xenobiotic-transporting ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3086 Xenobiotic-transporting ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_4005 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_2570 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_4079 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3443 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3439 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_4004 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_4078 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3442 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3438 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_2569 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_0086 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_3663 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_0113 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_4207 ABC transporter related protein K18231 msr; macrolide transport system ATP-binding/permease protein
C 02060 Phosphotransferase system (PTS) [PATH:cle02060]
D Clole_2979 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Clole_2922 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Clole_2980 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Clole_2137 phosphoryl transfer system HPr K02784 ptsH; phosphocarrier protein HPr
D Clole_0311 PTS system, glucose subfamily, IIA subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Clole_1200 PTS system, glucose subfamily, IIA subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Clole_0765 PTS system IIBC component protein K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D Clole_0041 PTS system, glucose-like IIB subunint K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Clole_3923 PTS system, beta-glucoside-specific IIABC subunit K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D Clole_3451 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D Clole_3844 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Clole_3843 1-phosphofructokinase K00882 fruK; 1-phosphofructokinase [EC:2.7.1.56]
C 03070 Bacterial secretion system [PATH:cle03070]
D Clole_2562 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Clole_3479 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Clole_2561 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Clole_3566 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Clole_2827 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Clole_3526 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Clole_2899 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Clole_4270 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Clole_3409 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Clole_2308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Clole_2306 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Clole_4032 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cle02020]
D Clole_1134 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Clole_1133 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Clole_0103 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Clole_0645 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Clole_3865 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Clole_1136 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clole_1137 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clole_3940 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D Clole_3939 two component transcriptional regulator, winged helix family K07770 cssR; two-component system, OmpR family, response regulator CssR
D Clole_1672 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Clole_1248 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Clole_3591 flagellin domain protein K02406 fliC; flagellin
D Clole_1041 flagellin domain protein K02406 fliC; flagellin
D Clole_0848 flagellin domain protein K02406 fliC; flagellin
D Clole_2431 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Clole_3933 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_2450 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_2249 multi-sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Clole_2250 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Clole_1673 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD
D Clole_3775 integral membrane sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Clole_3776 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR
D Clole_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Clole_0360 Polyamine-transporting ATPase K11631 bceA; bacitracin transport system ATP-binding protein
D Clole_0361 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein
D Clole_0427 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein
D Clole_0426 Fe(3+)-transporting ATPase K19083 braD; bacitracin transport system ATP-binding protein
D Clole_0359 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D Clole_0425 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D Clole_0358 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D Clole_0410 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D Clole_3065 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Clole_3066 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Clole_1231 two component transcriptional regulator, winged helix family K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D Clole_0032 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR
D Clole_2165 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_0320 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_1511 D-alanine/D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D Clole_1512 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D Clole_1514 alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
D Clole_0018 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Clole_0019 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR
D Clole_0118 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D Clole_1756 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Clole_1048 malic protein NAD-binding protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Clole_0069 Phosphonate-transporting ATPase K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Clole_0070 Abortive infection protein K09696 natB; sodium transport system permease protein
D Clole_1891 Accessory gene regulator B K07813 agrB; accessory gene regulator B
D Clole_3592 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D Clole_3766 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Clole_3702 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Clole_1527 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Clole_2194 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4238 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4245 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_1719 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Clole_1731 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Clole_2261 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Clole_0184 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0694 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0777 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0778 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0651 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1528 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1144 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2684 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1653 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2560 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2846 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3413 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3044 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Clole_4122 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3430 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3868 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3990 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3649 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3650 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_4204 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1114 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Clole_2434 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Clole_2435 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Clole_2445 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_2134 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_0906 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_2436 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Clole_1147 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Clole_0570 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_2049 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_0505 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_0522 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_1014 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_1340 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_3690 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_3986 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_2591 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_0514 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_1341 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_0504 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_0515 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_0523 response regulator receiver protein K07720 yesN; two-component system, response regulator YesN
D Clole_1015 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_2050 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_3987 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_2590 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_0571 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_0266 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D Clole_3629 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Clole_2811 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Clole_1221 Pectinesterase K01051 E3.1.1.11; pectinesterase [EC:3.1.1.11]
D Clole_3976 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0675 Cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_2863 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_1765 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_3667 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0683 Cellulase., Gelatinase B K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0038 Cellulose 1,4-beta-cellobiosidase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_2598 glycoside hydrolase family 5 K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0709 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_2599 type 3a cellulose-binding domain protein K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_1921 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_0485 Cellulase K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D Clole_3598 flagellar biosynthesis anti-sigma factor protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
D Clole_1843 DNA-cytosine methyltransferase K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cle02024]
D Clole_2992 quorum-sensing autoinducer 2 (AI-2), LuxS K07173 luxS; S-ribosylhomocysteine lyase [EC:4.4.1.21]
D Clole_2241 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Clole_0701 anthranilate synthase component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Clole_0702 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Clole_0253 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Clole_2250 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Clole_0464 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Clole_0915 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Clole_0465 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Clole_0916 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Clole_0466 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Clole_0917 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Clole_0467 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Clole_0918 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Clole_0468 Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Clole_0919 Phosphonate-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Clole_0688 Pectate lyase/Amb allergen K01728 pel; pectate lyase [EC:4.2.2.2]
D Clole_0658 S-layer domain-containing protein K20276 bapA; large repetitive protein
D Clole_3880 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clole_1968 type 3a cellulose-binding domain protein K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Clole_1631 Mannan endo-1,4-beta-mannosidase K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Clole_1102 Endoglucanase H/Glycosyl hydrolase family 26 K01218 gmuG; mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]
D Clole_2717 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Clole_1689 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Clole_1891 Accessory gene regulator B K07813 agrB; accessory gene regulator B
D Clole_3065 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Clole_3066 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Clole_1231 two component transcriptional regulator, winged helix family K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D Clole_1451 ABC-type transporter, periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein
D Clole_1447 ABC-type transporter, integral membrane subunit K15581 oppB; oligopeptide transport system permease protein
D Clole_1448 ABC-type transporter, integral membrane subunit K15582 oppC; oligopeptide transport system permease protein
D Clole_1449 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D Clole_1450 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D Clole_0086 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_3663 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_0113 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_3662 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D Clole_0087 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D Clole_3787 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clole_2065 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clole_1299 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clole_3786 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Clole_1300 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Clole_1301 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Clole_3785 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Clole_1302 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Clole_3784 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Clole_3783 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Clole_1303 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Clole_4270 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Clole_3479 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Clole_3566 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Clole_2827 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Clole_3526 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Clole_2899 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Clole_3409 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Clole_2308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Clole_2306 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Clole_1756 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Clole_0118 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cle02030]
D Clole_0184 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0694 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0777 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0778 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0651 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1528 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1144 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2684 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1653 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2560 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2846 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3413 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3044 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Clole_4122 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3430 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3868 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3990 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3649 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3650 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_4204 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1339 ABC-type sugar transport system periplasmic component-like protein K10439 rbsB; ribose transport system substrate-binding protein
D Clole_2435 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Clole_1114 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Clole_2434 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Clole_2445 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_2134 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_0906 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_2433 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Clole_2436 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Clole_1147 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Clole_2432 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Clole_2261 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Clole_2459 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Clole_2447 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Clole_2446 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D Clole_3933 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_2450 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_3934 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Clole_2449 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cle02040]
D Clole_2461 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Clole_2460 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Clole_2459 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Clole_2458 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D Clole_2457 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Clole_2456 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Clole_2454 Flagellar hook-length control protein-like protein K02414 fliK; flagellar hook-length control protein FliK
D Clole_2447 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Clole_2446 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D Clole_2443 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Clole_2442 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Clole_2441 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Clole_2439 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Clole_2440 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Clole_2463 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Clole_2462 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Clole_2453 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Clole_2452 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D Clole_3606 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Clole_3605 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D Clole_3604 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D Clole_3595 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Clole_3596 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Clole_3594 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Clole_3591 flagellin domain protein K02406 fliC; flagellin
D Clole_1041 flagellin domain protein K02406 fliC; flagellin
D Clole_0848 flagellin domain protein K02406 fliC; flagellin
D Clole_3589 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2
D Clole_3588 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Clole_1040 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Clole_3573 FlgN family protein K02423 fliT; flagellar protein FliT
D Clole_3933 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_2450 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_3934 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Clole_2449 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Clole_3598 flagellar biosynthesis anti-sigma factor protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Clole_0877 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor
D Clole_2353 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Clole_2431 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Clole_2829 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism
D Clole_2700 methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Clole_3632 Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cle01501]
D Clole_2843 glycoside hydrolase family 3 domain protein K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D Clole_1451 ABC-type transporter, periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein
D Clole_1447 ABC-type transporter, integral membrane subunit K15581 oppB; oligopeptide transport system permease protein
D Clole_1448 ABC-type transporter, integral membrane subunit K15582 oppC; oligopeptide transport system permease protein
D Clole_1449 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D Clole_1450 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D Clole_3675 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Clole_2896 Beta-lactamase K02172 blaR1; bla regulator protein blaR1
D Clole_4055 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Clole_4196 cell envelope-related transcriptional attenuator K02172 blaR1; bla regulator protein blaR1
D Clole_0316 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Clole_2895 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_3676 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_4056 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_4197 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_0315 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_0068 copper amine oxidase-like domain-containing protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Clole_0534 release factor H-coupled RctB family protein K18148 rtcB; release factor H-coupled RctB family protein
D Clole_2193 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clole_1276 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clole_2097 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Clole_2525 Penicillin-binding protein dimerization domain protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cle01502]
D Clole_0032 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR
D Clole_1161 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clole_3829 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clole_3017 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Clole_2333 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Clole_2332 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Clole_1049 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Clole_1512 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D Clole_1511 D-alanine/D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D Clole_2165 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_0320 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_1514 alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cle01503]
D Clole_1395 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1091 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1584 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1608 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1672 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Clole_1248 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cle01000]
C 01001 Protein kinases [BR:cle01001]
D Clole_1779 serine/threonine protein kinase with PASTA sensor(s) K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D Clole_2401 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Clole_1134 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Clole_3940 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D Clole_2249 multi-sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Clole_3775 integral membrane sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Clole_0359 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D Clole_0425 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D Clole_3065 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Clole_3066 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Clole_0018 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Clole_0118 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D Clole_3222 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Clole_2435 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Clole_0570 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_2049 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_0505 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_0522 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_1014 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_1340 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_3690 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_3986 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_2591 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_0514 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:cle01009]
D Clole_2584 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clole_1665 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Clole_1778 protein serine/threonine phosphatase K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16]
D Clole_3957 Haloacid dehalogenase domain protein hydrolase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3]
C 01002 Peptidases and inhibitors [BR:cle01002]
D Clole_2282 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Clole_1720 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Clole_2123 spore protease K06012 gpr; spore protease [EC:3.4.24.78]
D Clole_2326 peptidase U4 sporulation factor SpoIIGA K06383 spoIIGA; stage II sporulation protein GA (sporulation sigma-E factor processing peptidase) [EC:3.4.23.-]
D Clole_3328 GMP synthase, large subunit K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Clole_1304 peptidase C26 K07010 K07010; putative glutamine amidotransferase
D Clole_0086 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_3663 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_0113 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_2963 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Clole_2964 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Clole_1652 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Clole_1468 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Clole_1571 Amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Clole_4244 Glutamate synthase (ferredoxin) K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Clole_2038 glucosamine/fructose-6-phosphate aminotransferase, isomerizing K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Clole_3703 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Clole_1047 asparagine synthase (glutamine-hydrolyzing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D Clole_1121 DJ-1 family protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D Clole_0155 ThiJ/PfpI domain-containing protein K03152 thiJ; protein deglycase [EC:3.5.1.124]
D Clole_2713 Choloylglycine hydrolase K01442 cbh; choloylglycine hydrolase [EC:3.5.1.24]
D Clole_4031 peptidase C60 sortase A and B K08600 srtB; sortase B [EC:3.4.22.71]
D Clole_1891 Accessory gene regulator B K07813 agrB; accessory gene regulator B
D Clole_1425 Abortive infection protein K07052 K07052; CAAX protease family protein
D Clole_2902 Abortive infection protein K07052 K07052; CAAX protease family protein
D Clole_0268 Abortive infection protein K07052 K07052; CAAX protease family protein
D Clole_2408 Abortive infection protein K07052 K07052; CAAX protease family protein
D Clole_1805 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-]
D Clole_0106 Endothelin-converting enzyme 1 K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D Clole_2076 peptidase M14 carboxypeptidase A K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D Clole_1196 peptidase M14 carboxypeptidase A K01308 yqgT; g-D-glutamyl-meso-diaminopimelate peptidase [EC:3.4.19.11]
D Clole_2165 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_0320 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_1512 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D Clole_1880 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D Clole_2733 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D Clole_1790 Peptidase M16C associated domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D Clole_1702 peptidase M16 domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D Clole_3481 peptidase M16 domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D Clole_2030 Peptidase M16C associated domain protein K06972 PITRM1; presequence protease [EC:3.4.24.-]
D Clole_3040 Leucyl aminopeptidase K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Clole_0627 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Clole_3172 peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D Clole_2070 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Clole_1560 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Clole_3524 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Clole_1733 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Clole_1444 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Clole_1438 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Clole_3382 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Clole_3075 peptidase M42 family protein K01269 yhfE; aminopeptidase [EC:3.4.11.-]
D Clole_2420 membrane-associated zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Clole_1806 peptidase M55 D-aminopeptidase K16203 dppA1; D-amino peptidase [EC:3.4.11.-]
D Clole_3675 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Clole_2896 Beta-lactamase K02172 blaR1; bla regulator protein blaR1
D Clole_4055 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Clole_4196 cell envelope-related transcriptional attenuator K02172 blaR1; bla regulator protein blaR1
D Clole_0316 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Clole_1672 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Clole_1248 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Clole_3849 Subtilisin K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D Clole_1696 peptidase S8 and S53 subtilisin kexin sedolisin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D Clole_1697 peptidase S8 and S53 subtilisin kexin sedolisin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D Clole_2725 peptidase S8 and S53 subtilisin kexin sedolisin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D Clole_2115 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_2272 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_2275 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_3921 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_0855 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_1124 ATP-dependent Clp protease, proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Clole_1127 anti-sigma H sporulation factor, LonB K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Clole_1126 anti-sigma H sporulation factor, LonB K04076 lonB; ATP-dependent Lon protease [EC:3.4.21.53]
D Clole_2236 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Clole_2297 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Clole_2298 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Clole_2299 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Clole_1963 alpha/beta hydrolase fold protein K01259 pip; proline iminopeptidase [EC:3.4.11.5]
D Clole_3493 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Clole_3494 peptidase S41 K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Clole_0770 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Clole_3276 Peptidase S54, rhomboid domain K19225 gluP; rhomboid protease GluP [EC:3.4.21.105]
D Clole_1755 stage IV sporulation protein B K06399 spoIVB; stage IV sporulation protein B [EC:3.4.21.116]
D Clole_0653 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Clole_0743 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D Clole_1857 phage prohead protease, HK97 family K06904 GP4; Escherichia/Staphylococcus phage prohead protease
D Clole_2145 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Clole_2378 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Clole_2509 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
D Clole_3895 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cle01003]
D Clole_0635 glycosyl transferase family 39 K00728 POMT; dolichyl-phosphate-mannose-protein mannosyltransferase [EC:2.4.1.109]
D Clole_2186 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Clole_0152 glycosyl transferase group 1 K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]
D Clole_0621 glycosyl transferase group 1 K13678 cpoA; 1,2-diacylglycerol-3-alpha-glucose alpha-1,2-galactosyltransferase [EC:2.4.1.-]
D Clole_3133 glycogen/starch synthase, ADP-glucose type K00703 glgA; starch synthase [EC:2.4.1.21]
D Clole_1067 Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D Clole_2193 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clole_1276 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clole_3500 glycosyl transferase, WecB/TagA/CpsF family K05946 tagA; N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase [EC:2.4.1.187]
D Clole_3685 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cle01005]
D Clole_2043 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D Clole_3799 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D Clole_1709 glycosyl transferase family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-]
D Clole_3685 glycosyl transferase family 4 K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cle01011]
D Clole_3771 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Clole_2329 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Clole_2926 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Clole_1095 UDP-N-acetylmuramate/alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Clole_2331 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Clole_2334 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Clole_1573 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Clole_1161 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clole_3829 D-alanine/D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Clole_3017 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Clole_1678 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Clole_0653 peptidase U61 LD-carboxypeptidase A K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D Clole_2332 phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Clole_1049 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Clole_2970 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Clole_3331 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Clole_2193 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clole_1276 Peptidoglycan glycosyltransferase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Clole_2097 penicillin-binding protein transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Clole_2525 Penicillin-binding protein dimerization domain protein K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Clole_2335 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Clole_2336 Peptidoglycan glycosyltransferase K08384 spoVD; stage V sporulation protein D (sporulation-specific penicillin-binding protein)
D Clole_2376 penicillin-binding protein transpeptidase K05364 pbpA; penicillin-binding protein A
D Clole_2115 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_2272 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_2275 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_3921 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_0855 Serine-type D-Ala-D-Ala carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4]
D Clole_2165 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_0320 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_1512 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D Clole_2963 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Clole_2964 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Clole_1652 NLP/P60 protein K21471 cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
D Clole_1880 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D Clole_2733 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]
D Clole_4031 peptidase C60 sortase A and B K08600 srtB; sortase B [EC:3.4.22.71]
D Clole_2147 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Clole_3612 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Clole_2921 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Clole_1370 SpoIID/LytB domain protein K06381 spoIID; stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:4.2.2.29]
D Clole_1395 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1091 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1584 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1608 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cle01004]
D Clole_3052 malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Clole_3652 3-Oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain-containing protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Clole_3055 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Clole_3050 3-oxoacyl-(acyl-carrier-protein) synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Clole_3507 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clole_3051 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Clole_3048 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Clole_3053 enoyl-(acyl-carrier-protein) reductase II K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D Clole_3880 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clole_3651 o-succinylbenzoate--CoA ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Clole_2312 fatty acid/phospholipid synthesis protein PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Clole_1988 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Clole_2290 protein of unknown function DUF205 K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Clole_2163 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Clole_3640 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:cle01008]
C 01006 Prenyltransferases [BR:cle01006]
D Clole_1747 Farnesyltranstransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Clole_2423 undecaprenyl diphosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Clole_3265 Di-trans,poly-cis-decaprenylcistransferase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Clole_2242 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Clole_0859 UbiA prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D Clole_2506 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:cle01007]
D Clole_1401 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clole_1334 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Clole_2072 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Clole_2991 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Clole_1348 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Clole_4264 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Clole_0629 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Clole_3647 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Clole_1928 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Clole_1316 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Clole_3374 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Clole_1149 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Clole_2579 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Clole_4239 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Clole_1148 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Clole_2359 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Clole_0849 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Clole_4229 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Clole_2948 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Clole_0132 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Clole_2166 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Clole_1008 Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Clole_2597 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Clole_2596 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Clole_3433 Aspartate transaminase K11358 yhdR; aspartate aminotransferase [EC:2.6.1.1]
D Clole_2032 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Clole_4248 LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Clole_2533 Aspartate transaminase K10907 K10907; aminotransferase [EC:2.6.1.-]
D Clole_2488 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Clole_0470 Cystathionine beta-lyase K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D Clole_2508 Acetylornithine transaminase K00827 AGXT2; alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40]
D Clole_1393 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Clole_3653 glutamate-1-semialdehyde-2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Clole_2849 branched-chain amino acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Clole_2082 phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D Clole_3559 TDP-4-keto-6-deoxy-D-glucose transaminase K02805 wecE; dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:2.6.1.59]
D Clole_3813 Glutamine--scyllo-inositol transaminase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Clole_3584 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450 [BR:cle00199]
D Clole_1959 cytochrome P450 K15629 CYP152A; fatty-acid peroxygenase [EC:1.11.2.4]
C 00194 Photosynthesis proteins [BR:cle00194]
D Clole_3618 ATP synthase F1, epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Clole_3619 ATP synthase F1, beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Clole_3620 ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Clole_3621 ATP synthase F1, alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Clole_3622 ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Clole_3623 ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Clole_3624 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Clole_3625 ATP synthase F0, C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Clole_3626 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Clole_3628 putative ATP synthase protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cle03000]
D Clole_1843 DNA-cytosine methyltransferase K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
D Clole_0732 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0231 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0233 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0674 transcriptional regulator, AraC family K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D Clole_3151 transcriptional regulator, AraC family K02099 araC; AraC family transcriptional regulator, arabinose operon regulatory protein
D Clole_0565 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D Clole_3272 transcription activator effector binding protein K13653 K13653; AraC family transcriptional regulator
D Clole_3320 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D Clole_0135 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D Clole_0172 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D Clole_3292 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D Clole_0375 transcriptional regulator, AraC family K13653 K13653; AraC family transcriptional regulator
D Clole_2636 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Clole_3608 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D Clole_2771 sporulation transcriptional regulator SpoIIID K06283 spoIIID; putative DeoR family transcriptional regulator, stage III sporulation protein D
D Clole_0500 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Clole_1215 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Clole_3365 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Clole_2966 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Clole_3180 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Clole_3836 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Clole_3842 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Clole_3245 transcriptional regulator, LacI family K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D Clole_0207 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D Clole_0040 transcriptional regulator, LacI family K03484 scrR; LacI family transcriptional regulator, sucrose operon repressor
D Clole_3452 transcriptional regulator, GntR family with UTRA sensor domain K03486 treR2; GntR family transcriptional regulator, trehalose operon transcriptional repressor
D Clole_0567 transcriptional regulator, GntR family with UTRA sensor domain K03710 K03710; GntR family transcriptional regulator
D Clole_2688 regulatory protein GntR HTH K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Clole_1505 transcriptional regulator, GntR family with aminotransferase domain K00375 K00375; GntR family transcriptional regulator / MocR family aminotransferase
D Clole_0140 transcriptional regulator, GntR family K07979 ytrA; GntR family transcriptional regulator
D Clole_3278 regulatory protein TetR K09017 rutR; TetR/AcrR family transcriptional regulator
D Clole_0351 regulatory protein TetR K16138 uidR; TetR/AcrR family transcriptional regulator, repressor for uid operon
D Clole_4203 regulatory protein TetR K21453 icaR; TetR/AcrR family transcriptional regulator, biofilm operon repressor
D Clole_3296 regulatory protein MarR K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D Clole_0637 transcriptional regulator, MarR family K06075 slyA; MarR family transcriptional regulator, transcriptional regulator for hemolysin
D Clole_0034 regulatory protein MarR K15974 emrR; MarR family transcriptional regulator, negative regulator of the multidrug operon emrRAB
D Clole_3441 regulatory protein MarR K18909 mepR; MarR family transcriptional regulator, repressor for mepA
D Clole_4179 regulatory protein MarR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D Clole_3966 transcriptional regulator, MerR family K21744 tipA; MerR family transcriptional regulator, thiopeptide resistance regulator
D Clole_3194 transcriptional regulator, MerR family K21745 adhR; MerR family transcriptional regulator, aldehyde-responsive regulator
D Clole_1369 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Clole_2142 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Clole_0274 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Clole_2532 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Clole_4232 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Clole_0998 transcriptional regulator, Crp/Fnr family K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D Clole_0366 putative transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
D Clole_1685 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D Clole_2842 transcriptional regulator, BadM/Rrf2 family K17472 cymR; Rrf2 family transcriptional regulator, cysteine metabolism repressor
D Clole_1655 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Clole_1459 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor
D Clole_3486 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Clole_0131 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Clole_1313 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Clole_1255 transcriptional regulator, PadR-like family K10947 K10947; PadR family transcriptional regulator
D Clole_1898 Iron dependent repressor, diptheria toxin type K11924 mntR; DtxR family transcriptional regulator, manganese transport regulator
D Clole_2895 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_3676 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_4056 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_4197 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_0315 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_3381 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Clole_3928 cytidyltransferase-related domain protein K06211 nadR; HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes [EC:2.7.7.1 2.7.1.22]
D Clole_2886 transcriptional regulator, TrmB K23356 trmB; HTH-type transcriptional regulator, sugar sensing transcriptional regulator
D Clole_1096 purine operon repressor, PurR K09685 purR; HTH-type transcriptional regulator, purine operon repressor
D Clole_3498 putative transcriptional regulator, PucR family K02647 cdaR; carbohydrate diacid regulator
D Clole_0254 transcriptional regulator, CdaR K02647 cdaR; carbohydrate diacid regulator
D Clole_3033 Redox-sensing transcriptional repressor rex K01926 rex; redox-sensing transcriptional repressor
D Clole_2319 GTP-sensing pleiotropic transcriptional repressor CodY K03706 codY; transcriptional pleiotropic repressor
D Clole_4019 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator
D Clole_4021 transcriptional regulator, XRE family K07727 K07727; putative transcriptional regulator
D Clole_1474 helix-turn-helix domain protein K07729 K07729; putative transcriptional regulator
D Clole_1406 helix-turn-helix domain protein K07729 K07729; putative transcriptional regulator
D Clole_3016 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Clole_3924 transcriptional antiterminator, BglG K03488 licT; beta-glucoside operon transcriptional antiterminator
D Clole_0100 protein of unknown function DUF156 K21600 csoR; CsoR family transcriptional regulator, copper-sensing transcriptional repressor
D Clole_0532 transcriptional regulator, PucR family K23253 putR; PucR family transcriptional regulator, proline-responsive transcriptional activator
D Clole_3693 transcriptional regulator, AbrB family K06284 abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes
D Clole_1106 stage V sporulation protein T K04769 spoVT; AbrB family transcriptional regulator, stage V sporulation protein T
D Clole_0730 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clole_4262 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clole_4265 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clole_3173 transcriptional regulator, CarD family K07736 carD; CarD family transcriptional regulator, regulator of rRNA transcription
D Clole_1753 arginine repressor, ArgR K03402 argR; transcriptional regulator of arginine metabolism
D Clole_2127 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Clole_2836 transcriptional regulator, DeoR family K05311 cggR; central glycolytic genes regulator
D Clole_2280 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Clole_2323 Ribonucleotide reductase regulator NrdR-like protein K07738 nrdR; transcriptional repressor NrdR
D Clole_2339 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cle03021]
D Clole_3704 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D Clole_3517 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Clole_3556 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Clole_3555 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Clole_1771 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Clole_0877 RNA polymerase, sigma 32 subunit, RpoH K03086 rpoD; RNA polymerase primary sigma factor
D Clole_2353 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Clole_0166 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Clole_4059 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Clole_3931 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Clole_0902 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Clole_2361 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Clole_3892 RNA polymerase, sigma-24 subunit, ECF subfamily K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D Clole_1464 RNA polymerase, sigma 28 subunit, SigF K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Clole_2144 RNA polymerase, sigma 28 subunit, SigK K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Clole_2324 RNA polymerase, sigma 28 subunit, SigG K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Clole_2325 RNA polymerase, sigma 28 subunit, SigE K03091 sigE_F_G; RNA polymerase sigma-E/F/G factor
D Clole_1352 transcriptional regulator, LuxR family K27000 sigH; RNA polymerase sigma-H factor
D Clole_2431 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Clole_2417 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Clole_1744 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Clole_3565 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Clole_2401 putative anti-sigma regulatory factor, serine/threonine protein kinase K17752 rsbT; serine/threonine-protein kinase RsbT [EC:2.7.11.1]
D Clole_1258 Positive regulator of sigma(E) RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Clole_0008 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Clole_3375 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Clole_1626 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cle03019]
D Clole_2106 Ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-]
D Clole_2310 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Clole_2143 Ribocuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Clole_1821 Ribocuclease J K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Clole_2466 2,3 cyclic-nucleotide 2-phosphodiesterase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Clole_2826 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Clole_1942 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D Clole_0607 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_2520 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_1379 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_2605 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_0097 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Clole_2829 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clole_2409 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Clole_1626 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Clole_2584 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Clole_2129 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clole_3332 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clole_2241 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Clole_3592 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D Clole_2925 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cle03011]
D Clole_2427 ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D Clole_3540 ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D Clole_3518 ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D Clole_3529 ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D Clole_1071 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Clole_3550 ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D Clole_3532 ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D Clole_3510 ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D Clole_3547 ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D Clole_3519 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D Clole_3551 ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D Clole_3520 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D Clole_3533 ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D Clole_2410 ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D Clole_2305 ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D Clole_3537 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D Clole_1073 ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D Clole_3542 ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D Clole_2122 ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D Clole_2167 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Clole_3563 ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D Clole_3543 ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D Clole_3546 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D Clole_3545 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Clole_3534 ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D Clole_3531 ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D Clole_1076 ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D Clole_3558 ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D Clole_3564 ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D Clole_3557 ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D Clole_3511 ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D Clole_3536 ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D Clole_3527 ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D Clole_3539 ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D Clole_3516 ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D Clole_3530 ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D Clole_2301 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D Clole_2945 ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D Clole_2107 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D Clole_3541 ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D Clole_3544 Ribosomal protein L25/L23 K02892 RP-L23; large subunit ribosomal protein L23
D Clole_3535 ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D Clole_2109 ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D Clole_1783 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D Clole_3538 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Clole_3528 ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D Clole_1627 50S ribosomal protein L31 K02909 RP-L31; large subunit ribosomal protein L31
D Clole_2313 ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D Clole_4273 ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D Clole_2946 ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D Clole_3521 ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36
D Clole_3936 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 K02897 RP-L25; large subunit ribosomal protein L25
D Clole_3552 ribosomal protein L7Ae/L30e/S12e/Gadd45 K07590 RP-L7A; large subunit ribosomal protein L7A
D Clole_R0041 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0065 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0059 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0140 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0076 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0063 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0034 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0021 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0053 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0058 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0075 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0062 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0141 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0036 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0018 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0126 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0079 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0137 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0024 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0061 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0064 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0054 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cle03009]
D Clole_0204 hypothetical protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D Clole_2310 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Clole_2060 GTP-binding protein Era K03595 era; GTPase
D Clole_2110 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Clole_2417 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Clole_1744 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Clole_3565 NusG antitermination factor K02601 nusG; transcription termination/antitermination protein NusG
D Clole_2080 pseudouridine synthase Rsu K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19]
D Clole_0654 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Clole_1776 sun protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Clole_1787 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Clole_2133 Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Clole_4266 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Clole_3301 Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Clole_2338 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Clole_0016 protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Clole_1751 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Clole_1350 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Clole_4121 Conserved hypothetical protein CHP00246 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Clole_4154 rRNA (guanine-N(2)-)-methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Clole_1777 radical SAM enzyme, Cfr family K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Clole_1946 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Clole_2271 pseudouridine synthase Rsu K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D Clole_1793 pseudouridine synthase K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
D Clole_2281 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Clole_2916 pseudouridine synthase Rsu K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D Clole_1622 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Clole_3201 GCN5-related N-acetyltransferase K03790 rimJ; [ribosomal protein S5]-alanine N-acetyltransferase [EC:2.3.1.267]
D Clole_2303 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Clole_2159 Ribosomal protein S12 methylthiotransferase rimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Clole_2132 ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Clole_2106 Ribonuclease E K08301 rng; ribonuclease G [EC:3.1.26.-]
D Clole_2140 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D Clole_1349 ribonuclease III K11145 mrnC; mini-ribonuclease III [EC:3.1.26.-]
D Clole_0607 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_2520 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_1379 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_2605 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Clole_1780 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Clole_4206 ribosome small subunit-dependent GTPase A K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D Clole_2291 ribosome-associated GTPase EngA K03977 engA; GTPase
D Clole_2300 ribosome biogenesis GTP-binding protein YlqF K14540 rbgA; ribosome biogenesis GTPase A
D Clole_2196 GTP-binding proten HflX K03665 hflX; GTPase
D Clole_3682 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Clole_2544 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Clole_2413 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Clole_2418 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Clole_0003 RNA-binding S4 domain protein K14761 rlbA; ribosome-associated protein
D Clole_2114 iojap-like protein K09710 ybeB; ribosome-associated protein
D Clole_2058 metalloprotease ybeY K07042 ybeY; probable rRNA maturation factor
D Clole_2111 RNA-binding, CRM domain protein K07574 yhbY; RNA-binding protein
D Clole_3410 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Clole_2343 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Clole_2314 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cle03016]
D Clole_3345 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Clole_4141 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Clole_4183 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Clole_1401 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clole_4229 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Clole_3647 isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Clole_1316 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Clole_0629 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Clole_1334 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Clole_4264 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Clole_3374 Lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Clole_1149 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Clole_2166 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Clole_1008 Alanyl-tRNA synthetase, class IIc K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Clole_2579 asparaginyl-tRNA synthetase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D Clole_2359 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Clole_2948 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Clole_0132 threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Clole_0849 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Clole_1348 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Clole_1928 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Clole_1148 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Clole_2597 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Clole_2596 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Clole_2072 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Clole_2991 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Clole_2543 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Clole_1046 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Clole_0711 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Clole_1668 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Clole_3460 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Clole_3512 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Clole_2412 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Clole_2841 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2135 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2254 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_3682 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Clole_2242 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Clole_4268 tRNA modification GTPase mnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Clole_4267 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Clole_4272 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D Clole_R0109 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Clole_4239 aspartyl-tRNA synthetase K09759 aspC; nondiscriminating aspartyl-tRNA synthetase [EC:6.1.1.23]
D Clole_1916 ybaK/ebsC protein K03976 ybaK; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]
D Clole_3206 YbaK/prolyl-tRNA synthetase associated region K19055 prdX; Ala-tRNA(Pro) deacylase [EC:3.1.1.-]
D Clole_1026 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Clole_3376 TIM-barrel protein, nifR3 family K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Clole_2245 RNA modification enzyme, MiaB family K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Clole_2138 RNA modification enzyme, MiaB family K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Clole_3236 Methyltransferase type 12 K15256 cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]
D Clole_2302 tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Clole_2352 protein of unknown function DUF633 K06967 trmK; tRNA (adenine22-N1)-methyltransferase [EC:2.1.1.217]
D Clole_1937 RNA methyltransferase, TrmH family, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Clole_0015 methyltransferase small K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D Clole_2580 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family
D Clole_2839 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Clole_0286 hypothetical protein K21947 ttuA; tRNA-5-methyluridine54 2-sulfurtransferase [EC:2.8.1.15]
D Clole_2232 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Clole_2253 PP-loop domain protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA
D Clole_2912 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Clole_3463 7-cyano-7-deazaguanine reductase K09457 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13]
D Clole_3893 uncharacterized Fe-S protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Clole_2693 domain of unknown function DUF1730 K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D Clole_2900 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Clole_2136 tRNA sulfurtransferase K03151 thiI; tRNA uracil 4-sulfurtransferase [EC:2.8.1.4]
D Clole_3384 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Clole_1621 universal protein YeaZ K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Clole_3343 metalloendopeptidase, glycoprotease family K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Clole_1620 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Clole_2547 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Clole_3305 UBA/THIF-type NAD/FAD binding protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase
D Clole_2826 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Clole_2409 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cle03012]
D Clole_2414 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Clole_2947 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Clole_3034 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Clole_1556 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Clole_2426 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Clole_3548 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Clole_3549 translation elongation factor G K02355 fusA; elongation factor G
D Clole_1271 small GTP-binding protein K02355 fusA; elongation factor G
D Clole_1630 peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D Clole_2424 ribosome recycling factor K02838 frr; ribosome recycling factor
D Clole_1629 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Clole_1103 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Clole_3522 Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D Clole_1734 translation elongation factor P K02356 efp; elongation factor P
D Clole_1113 peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D Clole_2011 peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D Clole_0535 peptide chain release factor H K02839 prfH; peptide chain release factor
C 03110 Chaperones and folding catalysts [BR:cle03110]
D Clole_4213 ATPase AAA-2 domain protein K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA
D Clole_2046 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Clole_3012 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Clole_1125 ATP-dependent Clp protease ATP-binding subunit clpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Clole_1665 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Clole_2129 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clole_3332 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clole_2130 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D Clole_2632 heat shock protein DnaJ domain protein K05801 djlA; DnaJ like chaperone protein
D Clole_2951 Hsp33 protein K04083 hslO; molecular chaperone Hsp33
D Clole_2128 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Clole_2667 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Clole_0376 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Clole_3333 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Clole_1672 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Clole_1248 peptidase S1 and S6 chymotrypsin/Hap K04771 degP; serine protease Do [EC:3.4.21.107]
D Clole_1438 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Clole_3382 ATP-dependent metalloprotease FtsH K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Clole_3626 ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Clole_3849 Subtilisin K13275 isp; major intracellular serine protease [EC:3.4.21.-]
D Clole_1696 peptidase S8 and S53 subtilisin kexin sedolisin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D Clole_1697 peptidase S8 and S53 subtilisin kexin sedolisin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D Clole_2725 peptidase S8 and S53 subtilisin kexin sedolisin K14647 vpr; minor extracellular serine protease Vpr [EC:3.4.21.-]
D Clole_0487 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Clole_2388 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Clole_3420 Peptidylprolyl isomerase K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Clole_2386 peptidyl-prolyl cis-trans isomerase cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]
D Clole_1596 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D Clole_1675 PpiC-type peptidyl-prolyl cis-trans isomerase K07533 prsA; foldase protein PrsA [EC:5.2.1.8]
D Clole_1910 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8]
D Clole_0712 thioredoxin K03671 TXN; thioredoxin
D Clole_2550 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:cle04131]
D Clole_0441 Nucleoside-diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Clole_1676 band 7 protein K07192 FLOT; flotillin
D Clole_4176 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clole_4178 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clole_2835 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Clole_2251 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_1021 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_2583 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_1665 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Clole_0280 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:cle03051]
D Clole_1665 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cle03032]
D Clole_4148 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Clole_0732 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0231 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0233 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_1843 DNA-cytosine methyltransferase K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
D Clole_0204 hypothetical protein K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3
D Clole_1108 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Clole_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Clole_1077 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Clole_1093 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D Clole_0799 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D Clole_2785 IstB domain protein ATP-binding protein K02315 dnaC; DNA replication protein DnaC
D Clole_1480 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D Clole_0867 hypothetical protein K02315 dnaC; DNA replication protein DnaC
D Clole_2354 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Clole_1072 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_0945 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_2631 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Clole_2585 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clole_2523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Clole_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clole_2121 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clole_0013 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clole_0717 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_1693 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_1030 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Clole_2296 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Clole_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clole_2985 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Clole_0006 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Clole_2384 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Clole_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Clole_2385 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Clole_2320 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Clole_2868 DNA topoisomerase K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
D Clole_1935 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cle03036]
D Clole_0732 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0231 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0233 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_1843 DNA-cytosine methyltransferase K17398 DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]
D Clole_2310 ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Clole_1676 band 7 protein K07192 FLOT; flotillin
D Clole_1108 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Clole_0001 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Clole_0273 Ferritin Dps family protein K04047 dps; starvation-inducible DNA-binding protein
D Clole_2241 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Clole_2309 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Clole_2274 Segregation and condensation protein A K05896 scpA; segregation and condensation protein A
D Clole_2273 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D Clole_1112 Septum formation initiator K13052 divIC; cell division protein DivIC
D Clole_3497 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Clole_3758 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Clole_2156 cell division protein FtsK/SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Clole_2337 hypothetical protein K03586 ftsL; cell division protein FtsL
D Clole_2328 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Clole_2330 cell cycle protein K03588 ftsW; cell division protein FtsW
D Clole_3496 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Clole_2327 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Clole_2379 protein of unknown function DUF710 K09888 zapA; cell division protein ZapA
D Clole_1395 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1091 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1584 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1608 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_2098 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D Clole_2099 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Clole_2100 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Clole_2283 DivIVA domain K04074 divIVA; cell division initiation protein
D Clole_2285 protein of unknown function DUF552 K09772 sepF; cell division inhibitor SepF
D Clole_2094 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Clole_3607 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Clole_2095 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Clole_2096 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD
D Clole_2101 cell cycle protein K05837 rodA; rod shape determining protein RodA
D Clole_0842 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clole_0729 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clole_4263 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clole_0730 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clole_4262 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clole_4265 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clole_4267 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Clole_4266 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Clole_2173 integrase family protein K03733 xerC; integrase/recombinase XerC
D Clole_2278 integrase family protein K04763 xerD; integrase/recombinase XerD
D Clole_1171 integrase family protein K04763 xerD; integrase/recombinase XerD
D Clole_2362 integrase family protein K04763 xerD; integrase/recombinase XerD
D Clole_0811 integrase family protein K04763 xerD; integrase/recombinase XerD
D Clole_1849 integrase family protein K04763 xerD; integrase/recombinase XerD
D Clole_2768 integrase family protein K04763 xerD; integrase/recombinase XerD
D Clole_1128 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
D Clole_2923 Sporulation regulator WhiA K09762 whiA; cell division protein WhiA
C 03400 DNA repair and recombination proteins [BR:cle03400]
D Clole_1389 methylated-DNA/protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Clole_1687 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D Clole_3635 DNA-3-methyladenine glycosylase K03652 MPG; DNA-3-methyladenine glycosylase [EC:3.2.2.21]
D Clole_3616 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D Clole_3334 DNA-(apurinic or apyrimidinic site) lyase K03660 OGG1; N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18]
D Clole_2185 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Clole_3704 DEAD_2 domain protein K10844 ERCC2; DNA excision repair protein ERCC-2 [EC:5.6.2.3]
D Clole_0237 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Clole_0076 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Clole_3006 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Clole_3930 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Clole_1575 NUDIX hydrolase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55]
D Clole_2019 deoxyUTP pyrophosphatase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Clole_3028 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Clole_0389 DNA glycosylase/AP lyase, H2TH DNA-binding protein K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
D Clole_1250 exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D Clole_3506 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Clole_1346 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Clole_2985 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Clole_2063 DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D Clole_1645 excinuclease ABC, A subunit K03701 uvrA; excinuclease ABC subunit A
D Clole_4106 ABC transporter related protein K03701 uvrA; excinuclease ABC subunit A
D Clole_1638 excinuclease ABC, B subunit K03702 uvrB; excinuclease ABC subunit B
D Clole_1647 UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D Clole_2230 Excinuclease ABC C subunit domain protein K03703 uvrC; excinuclease ABC subunit C
D Clole_2987 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_2188 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_4201 ATP-dependent DNA helicase replicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_0395 viral RNA helicase 1 K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_3175 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_2257 DNA polymerase III, epsilon subunit K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_0225 UvrD/REP helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Clole_3556 DNA-directed RNA polymerase, beta subunit K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Clole_3555 DNA-directed RNA polymerase, beta' subunit K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Clole_3517 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Clole_1771 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Clole_1104 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Clole_2244 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Clole_0921 DNA mismatch repair protein MutS domain protein K03555 mutS; DNA mismatch repair protein MutS
D Clole_1939 MutS2 protein K07456 mutS2; DNA mismatch repair protein MutS2
D Clole_3903 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Clole_2243 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Clole_1745 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Clole_1746 Exonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Clole_2585 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Clole_2523 DNA polymerase III, alpha subunit K03763 polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]
D Clole_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Clole_2121 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Clole_0013 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D Clole_0717 Exonuclease RNase T and DNA polymerase III K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_1693 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Clole_1030 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Clole_1072 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_0945 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_2631 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Clole_3024 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Clole_3601 helicase, RecD/TraA family K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
D Clole_2467 recA protein K03553 recA; recombination protein RecA
D Clole_2381 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Clole_2380 Holliday junction ATP-dependent DNA helicase ruvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Clole_1772 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Clole_2927 SMC domain protein K03546 sbcC; DNA repair protein SbcC/Rad50
D Clole_2928 nuclease SbcCD, D subunit K03547 sbcD; DNA repair protein SbcD/Mre11
D Clole_3010 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Clole_0004 DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D Clole_1786 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clole_2403 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Clole_2062 DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D Clole_1032 Recombination protein recR K06187 recR; recombination protein RecR
D Clole_1754 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Clole_1796 Holliday junction resolvase recU K03700 recU; recombination protein U
D Clole_1660 recombination helicase AddA K16898 addA; ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
D Clole_1659 UvrD/REP helicase K16899 addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]
D Clole_0006 DNA gyrase, A subunit K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Clole_2384 DNA topoisomerase (ATP-hydrolyzing) K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Clole_0005 DNA gyrase, B subunit K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Clole_2385 DNA topoisomerase (ATP-hydrolyzing) K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Clole_2320 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Clole_1108 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Clole_0796 RecT protein K07455 recT; recombination protein RecT
D Clole_2788 RecT protein K07455 recT; recombination protein RecT
D Clole_0097 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D Clole_3670 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Clole_2236 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88]
D Clole_1388 regulatory protein RecX K03565 recX; regulatory protein
D Clole_3131 ribonucleoside-diphosphate reductase, alpha subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Clole_3130 ribonucleotide reductase K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D Clole_1254 phosphoesterase RecJ domain protein K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:cle03029]
D Clole_2414 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Clole_2947 Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D Clole_2426 translation elongation factor Ts K02357 tsf; elongation factor Ts
D Clole_3548 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Clole_3549 translation elongation factor G K02355 fusA; elongation factor G
D Clole_1271 small GTP-binding protein K02355 fusA; elongation factor G
D Clole_2060 GTP-binding protein Era K03595 era; GTPase
D Clole_2072 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Clole_1316 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Clole_1149 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Clole_2359 glycyl-tRNA synthetase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D Clole_4264 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Clole_4241 glutamyl-tRNA(Gln) amidotransferase, A subunit K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Clole_4240 glutamyl-tRNA(Gln) amidotransferase, B subunit K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Clole_4242 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Clole_0947 DnaB domain protein helicase domain protein K17680 PEO1; twinkle protein [EC:5.6.2.3]
D Clole_1072 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_0945 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Clole_2631 single-strand binding protein/Primosomal replication protein n K03111 ssb; single-strand DNA-binding protein
D Clole_2129 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clole_2128 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Clole_3332 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clole_3333 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Clole_2130 Chaperone protein dnaJ K03686 dnaJ; molecular chaperone DnaJ
D Clole_2841 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2135 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2254 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_4270 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Clole_1665 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cle02000]
D Clole_3085 Xenobiotic-transporting ATPase K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3086 Xenobiotic-transporting ATPase K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_4005 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_2570 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_4079 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3443 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3439 Xenobiotic-transporting ATPase K18887 efrA; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_4004 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_4078 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3442 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_3438 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_2569 Xenobiotic-transporting ATPase K18888 efrB; ATP-binding cassette, subfamily B, multidrug efflux pump
D Clole_0646 Xenobiotic-transporting ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Clole_0124 Xenobiotic-transporting ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Clole_4103 Xenobiotic-transporting ATPase K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial
D Clole_0086 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_3663 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_0113 ABC-type bacteriocin transporter K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D Clole_4052 Xenobiotic-transporting ATPase K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D Clole_4053 Xenobiotic-transporting ATPase K06148 ABCC-BAC; ATP-binding cassette, subfamily C, bacterial
D Clole_4207 ABC transporter related protein K18231 msr; macrolide transport system ATP-binding/permease protein
D Clole_1923 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein
D Clole_0045 sulfate ABC transporter, periplasmic sulfate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein
D Clole_0046 sulfate ABC transporter, inner membrane subunit CysT K02046 cysU; sulfate/thiosulfate transport system permease protein
D Clole_0047 sulfate ABC transporter, inner membrane subunit CysW K02047 cysW; sulfate/thiosulfate transport system permease protein
D Clole_0048 sulfate ABC transporter, ATPase subunit K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3]
D Clole_0449 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Clole_0450 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Clole_0451 Fe(3+)-transporting ATPase K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Clole_4035 nitrogenase cofactor biosynthesis protein NifB K15553 ssuA; sulfonate transport system substrate-binding protein
D Clole_4037 ABC-type transporter, integral membrane subunit K15554 ssuC; sulfonate transport system permease protein
D Clole_4036 Taurine-transporting ATPase K15555 ssuB; sulfonate transport system ATP-binding protein [EC:7.6.2.14]
D Clole_0511 extracellular solute-binding protein family 1 K02012 afuA; iron(III) transport system substrate-binding protein
D Clole_0513 ABC-type transporter, integral membrane subunit K02011 afuB; iron(III) transport system permease protein
D Clole_0512 Fe(3+)-transporting ATPase K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7]
D Clole_2932 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Clole_0388 extracellular solute-binding protein family 1 K11069 potD; spermidine/putrescine transport system substrate-binding protein
D Clole_2933 ABC-type transporter, integral membrane subunit K11070 potC; spermidine/putrescine transport system permease protein
D Clole_2934 ABC-type transporter, integral membrane subunit K11071 potB; spermidine/putrescine transport system permease protein
D Clole_2935 spermidine/putrescine ABC transporter ATPase subunit K11072 potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]
D Clole_0191 ABC-type glycine betaine transport, periplasmic subunit K05845 opuC; osmoprotectant transport system substrate-binding protein
D Clole_0190 glycine betaine/L-proline ABC transporter, ATPase subunit K05847 opuA; osmoprotectant transport system ATP-binding protein [EC:7.6.2.9]
D Clole_0543 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Clole_0435 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Clole_1397 putative lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Clole_2504 NlpA lipoprotein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Clole_1914 ABC transporter substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Clole_0436 ABC-type transporter, integral membrane subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Clole_0542 ABC-type transporter, integral membrane subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Clole_1398 ABC-type transporter, integral membrane subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Clole_2502 ABC-type transporter, integral membrane subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Clole_1913 ABC-type transporter, integral membrane subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Clole_0541 ABC-type transporter, integral membrane subunit K02050 ABC.SN.P; NitT/TauT family transport system permease protein
D Clole_0437 Taurine-transporting ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Clole_0540 Taurine-transporting ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Clole_1399 Fe(3+)-transporting ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Clole_2503 Sulfate-transporting ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Clole_1912 Taurine-transporting ATPase K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Clole_3499 Glycerol-3-phosphate-transporting ATPase K10112 msmX; multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Clole_3841 extracellular solute-binding protein family 1 K25086 musE; maltose transport system substrate-binding protein
D Clole_0209 extracellular solute-binding protein family 1 K25086 musE; maltose transport system substrate-binding protein
D Clole_3840 ABC-type transporter, integral membrane subunit K25087 musF; maltose transport system permease protein
D Clole_0210 ABC-type transporter, integral membrane subunit K25087 musF; maltose transport system permease protein
D Clole_0211 ABC-type transporter, integral membrane subunit K25088 musG; maltose transport system permease protein
D Clole_3839 ABC-type transporter, integral membrane subunit K25088 musG; maltose transport system permease protein
D Clole_1932 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_0690 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_2974 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_0496 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_0299 extracellular solute-binding protein family 1 K15770 cycB; arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein
D Clole_1930 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_2973 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_0300 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_0691 ABC-type transporter, integral membrane subunit K15771 ganP; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_2972 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_1931 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_0301 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_0692 ABC-type transporter, integral membrane subunit K15772 ganQ; arabinogalactan oligomer / maltooligosaccharide transport system permease protein
D Clole_2589 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_0572 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_2048 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_3312 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_3408 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_3689 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_3982 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_0246 extracellular solute-binding protein family 1 K10117 msmE; raffinose/stachyose/melibiose transport system substrate-binding protein
D Clole_2588 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Clole_0573 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Clole_3311 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Clole_0247 ABC-type transporter, integral membrane subunit K10118 msmF; raffinose/stachyose/melibiose transport system permease protein
D Clole_3310 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_2587 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_0574 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_3406 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_0248 ABC-type transporter, integral membrane subunit K10119 msmG; raffinose/stachyose/melibiose transport system permease protein
D Clole_1222 extracellular solute-binding protein family 1 K10192 togB; oligogalacturonide transport system substrate-binding protein
D Clole_1223 extracellular solute-binding protein family 1 K10192 togB; oligogalacturonide transport system substrate-binding protein
D Clole_1224 ABC-type transporter, integral membrane subunit K10193 togM; oligogalacturonide transport system permease protein
D Clole_1225 ABC-type transporter, integral membrane subunit K10194 togN; oligogalacturonide transport system permease protein
D Clole_2053 Domain of unknown function DUF3502 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Clole_1012 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Clole_0524 extracellular solute-binding protein family 1 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Clole_0312 Domain of unknown function DUF3502 K17318 lplA; putative aldouronate transport system substrate-binding protein
D Clole_1010 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein
D Clole_2051 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein
D Clole_0525 ABC-type transporter, integral membrane subunit K17319 lplB; putative aldouronate transport system permease protein
D Clole_0526 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein
D Clole_1011 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein
D Clole_2052 ABC-type transporter, integral membrane subunit K17320 lplC; putative aldouronate transport system permease protein
D Clole_1342 periplasmic binding protein/LacI transcriptional regulator K10543 xylF; D-xylose transport system substrate-binding protein
D Clole_1343 periplasmic sugar-binding protein K10546 chvE; putative multiple sugar transport system substrate-binding protein
D Clole_1345 ABC-type transporter, integral membrane subunit K10547 gguB; putative multiple sugar transport system permease protein
D Clole_1344 Monosaccharide-transporting ATPase K10548 gguA; putative multiple sugar transport system ATP-binding protein [EC:7.5.2.-]
D Clole_1339 ABC-type sugar transport system periplasmic component-like protein K10439 rbsB; ribose transport system substrate-binding protein
D Clole_0506 periplasmic binding protein/LacI transcriptional regulator K23508 ytfQ; galactofuranose transport system substrate-binding protein
D Clole_0509 ABC-type transporter, integral membrane subunit K23509 ytfT; galactofuranose transport system permease protein
D Clole_0508 ABC-type transporter, integral membrane subunit K23509 ytfT; galactofuranose transport system permease protein
D Clole_0507 Monosaccharide-transporting ATPase K10820 ytfR; galactofuranose transport system ATP-binding protein [EC:7.5.2.9]
D Clole_0175 extracellular solute-binding protein family 1 K05813 ugpB; sn-glycerol 3-phosphate transport system substrate-binding protein
D Clole_0173 ABC-type transporter, integral membrane subunit K05814 ugpA; sn-glycerol 3-phosphate transport system permease protein
D Clole_0174 ABC-type transporter, integral membrane subunit K05815 ugpE; sn-glycerol 3-phosphate transport system permease protein
D Clole_0338 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clole_2553 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clole_1606 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clole_1607 basic membrane lipoprotein K07335 bmpA; basic membrane protein A and related proteins
D Clole_1604 ABC-type transporter, integral membrane subunit K23535 nupB; general nucleoside transport system permease protein
D Clole_0340 ABC-type transporter, integral membrane subunit K23535 nupB; general nucleoside transport system permease protein
D Clole_0341 ABC-type transporter, integral membrane subunit K23536 nupC; general nucleoside transport system permease protein
D Clole_1603 ABC-type transporter, integral membrane subunit K23536 nupC; general nucleoside transport system permease protein
D Clole_1605 Monosaccharide-transporting ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D Clole_0339 Monosaccharide-transporting ATPase K23537 nupA; general nucleoside transport system ATP-binding protein
D Clole_3985 extracellular solute-binding protein family 1 K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein
D Clole_2647 ABC-type transporter, integral membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein
D Clole_3407 ABC-type transporter, integral membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein
D Clole_3984 ABC-type transporter, integral membrane subunit K02025 ABC.MS.P; multiple sugar transport system permease protein
D Clole_2646 ABC-type transporter, integral membrane subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Clole_3983 ABC-type transporter, integral membrane subunit K02026 ABC.MS.P1; multiple sugar transport system permease protein
D Clole_1136 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clole_1137 phosphate binding protein K02040 pstS; phosphate transport system substrate-binding protein
D Clole_1138 phosphate ABC transporter, inner membrane subunit PstC K02037 pstC; phosphate transport system permease protein
D Clole_1139 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Clole_1140 phosphate ABC transporter, ATPase subunit K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Clole_3244 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 phnD; phosphonate transport system substrate-binding protein
D Clole_3241 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Clole_3242 phosphonate ABC transporter, inner membrane subunit K02042 phnE; phosphonate transport system permease protein
D Clole_3243 phosphonate ABC transporter, ATPase subunit K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2]
D Clole_1237 ABC-type transporter, periplasmic subunit family 3 K10039 peb1A; aspartate/glutamate/glutamine transport system substrate-binding protein
D Clole_1239 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D Clole_1238 polar amino acid ABC transporter, inner membrane subunit K10040 peb1B; aspartate/glutamate/glutamine transport system permease protein
D Clole_1236 Phosphonate-transporting ATPase K10041 peb1C; aspartate/glutamate/glutamine transport system ATP-binding protein [EC:7.4.2.1]
D Clole_3475 ABC-type transporter, periplasmic subunit family 3 K23059 artP; arginine/lysine/histidine transporter system substrate-binding protein
D Clole_3474 polar amino acid ABC transporter, inner membrane subunit K17077 artQ; arginine/lysine/histidine transport system permease protein
D Clole_3473 Phosphate-transporting ATPase K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1]
D Clole_0464 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Clole_0915 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Clole_0465 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Clole_0916 ABC-type transporter, integral membrane subunit K01997 livH; branched-chain amino acid transport system permease protein
D Clole_0466 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Clole_0917 ABC-type transporter, integral membrane subunit K01998 livM; branched-chain amino acid transport system permease protein
D Clole_0467 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Clole_0918 Monosaccharide-transporting ATPase K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Clole_0468 Fe(3+)-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Clole_0919 Phosphonate-transporting ATPase K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Clole_4166 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Clole_0380 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Clole_1590 NLPA lipoprotein K02073 metQ; D-methionine transport system substrate-binding protein
D Clole_4167 ABC-type transporter, integral membrane subunit K02072 metI; D-methionine transport system permease protein
D Clole_0379 ABC-type transporter, integral membrane subunit K02072 metI; D-methionine transport system permease protein
D Clole_1589 ABC-type transporter, integral membrane subunit K02072 metI; D-methionine transport system permease protein
D Clole_4168 Phosphonate-transporting ATPase K02071 metN; D-methionine transport system ATP-binding protein
D Clole_0378 Phosphonate-transporting ATPase K02071 metN; D-methionine transport system ATP-binding protein
D Clole_1588 Phosphonate-transporting ATPase K02071 metN; D-methionine transport system ATP-binding protein
D Clole_4130 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D Clole_4009 ABC transporter substrate binding protein K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D Clole_4129 ABC-type transporter, integral membrane subunit K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D Clole_4008 ABC-type transporter, integral membrane subunit K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D Clole_4128 Phosphonate-transporting ATPase K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D Clole_4007 Phosphonate-transporting ATPase K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D Clole_0648 ABC-type transporter, periplasmic subunit family 3 K17073 lysX1; putative lysine transport system substrate-binding protein
D Clole_0649 polar amino acid ABC transporter, inner membrane subunit K17074 lysX2; putative lysine transport system permease protein
D Clole_0650 Fe(3+)-transporting ATPase K17076 lysY; putative lysine transport system ATP-binding protein
D Clole_3467 ABC-type transporter, periplasmic subunit family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Clole_4144 ABC-type transporter, periplasmic subunit family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Clole_0883 ABC-type transporter, periplasmic subunit family 3 K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Clole_0880 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Clole_4143 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Clole_0881 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Clole_3468 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Clole_0882 Fe(3+)-transporting ATPase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Clole_4142 Phosphonate-transporting ATPase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Clole_3469 Sulfate-transporting ATPase K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Clole_1451 ABC-type transporter, periplasmic subunit K15580 oppA; oligopeptide transport system substrate-binding protein
D Clole_1447 ABC-type transporter, integral membrane subunit K15581 oppB; oligopeptide transport system permease protein
D Clole_1448 ABC-type transporter, integral membrane subunit K15582 oppC; oligopeptide transport system permease protein
D Clole_1449 oligopeptide/dipeptide ABC transporter, ATPase subunit K15583 oppD; oligopeptide transport system ATP-binding protein
D Clole_1450 oligopeptide/dipeptide ABC transporter, ATPase subunit K10823 oppF; oligopeptide transport system ATP-binding protein
D Clole_3787 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clole_2065 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clole_1299 ABC-type transporter, periplasmic subunit K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Clole_3786 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Clole_1300 ABC-type transporter, integral membrane subunit K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Clole_1301 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Clole_3785 ABC-type transporter, integral membrane subunit K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Clole_1302 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Clole_3784 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Clole_3783 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Clole_1303 oligopeptide/dipeptide ABC transporter, ATPase subunit K02032 ddpF; peptide/nickel transport system ATP-binding protein
D Clole_3213 ABC-type transporter, periplasmic subunit K25308 fhuD; ferric hydroxamate/heme transport system substrate-binding protein
D Clole_3212 ABC-type transporter, integral membrane subunit K25288 fhuB; ferric hydroxamate/heme transport system permease protein
D Clole_3211 ABC-type transporter, integral membrane subunit K25289 fhuG; ferric hydroxamate/heme transport system permease protein
D Clole_3210 Iron-chelate-transporting ATPase K25290 fhuA; ferric hydroxamate/heme transport system ATP-binding protein [EC:7.2.2.16]
D Clole_1167 ABC-type transporter, periplasmic subunit K25282 yclQ; iron-siderophore transport system substrate-binding protein
D Clole_1165 ABC-type transporter, integral membrane subunit K25283 yclO; iron-siderophore transport system permease protein
D Clole_1164 ABC-type transporter, integral membrane subunit K25284 yclN; iron-siderophore transport system permease protein
D Clole_1166 Iron-chelate-transporting ATPase K25285 yclP; iron-siderophore transport system ATP-binding protein [EC:7.2.2.-]
D Clole_0370 ABC-type transporter, periplasmic subunit K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Clole_0161 ABC-type transporter, periplasmic subunit K02016 ABC.FEV.S; iron complex transport system substrate-binding protein
D Clole_0371 ABC-type transporter, integral membrane subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D Clole_0163 ABC-type transporter, integral membrane subunit K02015 ABC.FEV.P; iron complex transport system permease protein
D Clole_0372 Phosphonate-transporting ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Clole_0162 Phosphonate-transporting ATPase K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-]
D Clole_0659 ABC-type transporter, periplasmic subunit K25034 btuF; cobalamin transport system substrate-binding protein
D Clole_0660 ABC-type transporter, integral membrane subunit K25027 btuC; cobalamin transport system permease protein
D Clole_0661 Iron-chelate-transporting ATPase K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Clole_3252 ABC-type metal ion transporter, periplasmic subunit K09815 znuA; zinc transport system substrate-binding protein
D Clole_3250 ABC-type transporter, integral membrane subunit K09816 znuB; zinc transport system permease protein
D Clole_3251 Phosphonate-transporting ATPase K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Clole_4219 BioY protein K03523 bioY; biotin transport system substrate-specific component
D Clole_0096 protein of unknown function DUF1393 K16924 mtsT; energy-coupling factor transport system substrate-specific component
D Clole_0094 ABC-type transporter, integral membrane subunit K16785 ecfT; energy-coupling factor transport system permease protein
D Clole_3513 ABC-type transporter, integral membrane subunit K16785 ecfT; energy-coupling factor transport system permease protein
D Clole_3515 Polyamine-transporting ATPase K16786 ecfA1; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Clole_3514 Polyamine-transporting ATPase K16787 ecfA2; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Clole_0095 Xenobiotic-transporting ATPase., Polyamine-transporting ATPase K01552 ecfA; energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
D Clole_3073 ABC-2 type transporter K11051 cylB; multidrug/hemolysin transport system permease protein
D Clole_3074 Phosphonate-transporting ATPase K11050 cylA; multidrug/hemolysin transport system ATP-binding protein
D Clole_3812 ABC-2 type transporter K09690 wzm; homopolymeric O-antigen transport system permease protein
D Clole_3811 Teichoic-acid-transporting ATPase K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D Clole_0070 Abortive infection protein K09696 natB; sodium transport system permease protein
D Clole_0069 Phosphonate-transporting ATPase K09697 natA; sodium transport system ATP-binding protein [EC:7.2.2.4]
D Clole_3352 ABC-2 type transporter K25151 gldF; gliding motility-associated transport system permease protein
D Clole_3351 Sulfate-transporting ATPase K25152 gldA; gliding motility-associated transport system ATP-binding protein
D Clole_3353 ABC-type uncharacterized transport system K25153 gldG; gliding motility-associatede transport system auxiliary component
D Clole_3189 ABC-2 type transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D Clole_0120 ABC-2 type transporter K25142 lnrN; linearmycin/streptolysin S transport system permease protein
D Clole_3190 ABC-2 type transporter K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D Clole_0121 ABC-2 type transporter K25143 lnrM; linearmycin/streptolysin S transport system permease protein
D Clole_3191 Sulfate-transporting ATPase K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D Clole_0122 Sulfate-transporting ATPase K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D Clole_1035 Molybdate-transporting ATPase K25144 lnrL; linearmycin/streptolysin S transport system ATP-binding protein
D Clole_0361 protein of unknown function DUF214 K11632 bceB; bacitracin transport system permease protein
D Clole_0360 Polyamine-transporting ATPase K11631 bceA; bacitracin transport system ATP-binding protein
D Clole_0427 protein of unknown function DUF214 K19084 braE; bacitracin transport system permease protein
D Clole_0426 Fe(3+)-transporting ATPase K19083 braD; bacitracin transport system ATP-binding protein
D Clole_0142 hypothetical protein K16919 ytrC_D; acetoin utilization transport system permease protein
D Clole_0141 Monosaccharide-transporting ATPase K16921 ytrB; acetoin utilization transport system ATP-binding protein
D Clole_3496 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Clole_3497 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D Clole_1337 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein
D Clole_3900 protein of unknown function DUF990 K25154 evrC; viologen exporter family transport system permease protein
D Clole_1336 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein
D Clole_3901 protein of unknown function DUF990 K25155 evrB; viologen exporter family transport system permease protein
D Clole_3902 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D Clole_1335 ABC transporter related protein K25156 evrA; viologen exporter family transport system ATP-binding protein
D Clole_1561 putative ABC transporter, permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Clole_1037 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Clole_3964 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Clole_4062 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Clole_3259 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Clole_4191 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Clole_3426 hypothetical protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D Clole_1036 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Clole_1562 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_4251 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_1273 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_1284 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_3427 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_4190 Fe(3+)-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_0913 Polyamine-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_3260 Polyamine-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_3263 Phosphonate-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_3965 Sulfate-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_4063 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_2639 Sulfate-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_0062 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_4047 Fe(3+)-transporting ATPase K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Clole_3141 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_2938 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_2939 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_0680 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_2671 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_0194 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_4041 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_0055 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_1570 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_2008 hypothetical protein K02004 ABC.CD.P; putative ABC transport system permease protein
D Clole_3140 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clole_2940 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clole_0679 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clole_2670 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clole_0195 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clole_1698 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clole_4042 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clole_0054 Phosphonate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clole_1569 Sulfate-transporting ATPase K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Clole_3287 FeS assembly ATPase SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D Clole_1999 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
D Clole_0037 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Clole_1656 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Clole_0697 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_3894 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_3874 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_3266 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_0633 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_4099 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_2498 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_1530 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_3972 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_0469 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_3446 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_2995 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_3949 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_3127 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_2247 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_3179 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Clole_0292 multi antimicrobial extrusion protein MatE K26937 dinF; MATE family, multidrug efflux pump
D Clole_3937 major facilitator superfamily MFS_1 K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter
D Clole_0280 hypothetical protein K06902 UMF1; MFS transporter, UMF1 family
D Clole_2979 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Clole_2922 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Clole_2980 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Clole_2137 phosphoryl transfer system HPr K02784 ptsH; phosphocarrier protein HPr
D Clole_0311 PTS system, glucose subfamily, IIA subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Clole_1200 PTS system, glucose subfamily, IIA subunit K20118 ptsG; glucose PTS system EIICBA or EIICB component [EC:2.7.1.199]
D Clole_0765 PTS system IIBC component protein K20108 malT; maltose PTS system EIICB or EIICBA component [EC:2.7.1.208]
D Clole_0041 PTS system, glucose-like IIB subunint K02810 scrA; sucrose PTS system EIIBCA or EIIBC component [EC:2.7.1.211]
D Clole_3923 PTS system, beta-glucoside-specific IIABC subunit K02757 bglF; beta-glucoside PTS system EIICBA component [EC:2.7.1.-]
D Clole_3451 PTS system, trehalose-specific IIBC subunit K02819 treB; trehalose PTS system EIIBC or EIIBCA component [EC:2.7.1.201]
D Clole_3844 PTS system, fructose subfamily, IIC subunit K02770 fruA; fructose PTS system EIIBC or EIIC component [EC:2.7.1.202]
D Clole_1557 Ion transport 2 domain protein K10716 kch; voltage-gated potassium channel
D Clole_1526 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Clole_3701 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Clole_0854 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Clole_0552 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Clole_0061 Protein of unknown function DUF3520 K07114 yfbK; Ca-activated chloride channel homolog
D Clole_0598 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Clole_0601 von Willebrand factor type A K07114 yfbK; Ca-activated chloride channel homolog
D Clole_2172 formate/nitrite transporter K21993 fdhC; formate transporter
D Clole_0294 formate/nitrite transporter K02598 nirC; nitrite transporter
D Clole_2702 large conductance mechanosensitive channel protein K03282 mscL; large conductance mechanosensitive channel
D Clole_2347 MscS Mechanosensitive ion channel K16052 ynaI; MscS family membrane protein
D Clole_1298 magnesium transporter K06213 mgtE; magnesium transporter
D Clole_3933 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_2450 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_3934 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Clole_2449 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Clole_3661 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Clole_0589 Mg2 transporter protein CorA family protein K03284 corA; magnesium transporter
D Clole_1632 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Clole_2953 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Clole_2690 LrgA family protein K06518 cidA; holin-like protein
D Clole_4087 microcompartments protein K04027 eutM; ethanolamine utilization protein EutM
D Clole_3325 sugar (Glycoside-Pentoside-Hexuronide) transporter K11104 melB; melibiose permease
D Clole_3833 spore germination protein K06311 yndE; spore germination protein
D Clole_1636 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Clole_1965 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Clole_1991 zinc/iron permease K07238 TC.ZIP; zinc transporter, ZIP family
D Clole_3232 protein of unknown function DUF6 transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein
D Clole_1689 protein of unknown function DUF606 K09936 TC.BAT2; bacterial/archaeal transporter family-2 protein
D Clole_0255 Gluconate transporter K03299 TC.GNTP; gluconate:H+ symporter, GntP family
D Clole_2113 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Clole_2653 Na+/Ca+ antiporter, CaCA family K07301 yrbG; cation:H+ antiporter
D Clole_4107 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D Clole_0157 sodium/glutamate symporter K03312 gltS; glutamate:Na+ symporter, ESS family
D Clole_1972 Na+/H+ antiporter NhaC-like protein K18218 tet35; tetracycline resistance efflux pump
D Clole_3239 sodium/hydrogen exchanger K11105 cvrA; potassium/hydrogen antiporter
D Clole_2635 sodium/hydrogen exchanger K26730 napA; Na+:H+ antiporter
D Clole_0281 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein
D Clole_0220 cation transporter K03498 trkH; trk/ktr system potassium uptake protein
D Clole_2582 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D Clole_0282 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Clole_0221 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Clole_2581 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Clole_1290 permease for cytosine/purines uracil thiamine allantoin K10974 codB; cytosine permease
D Clole_1976 uracil-xanthine permease K02824 uraA; uracil permease
D Clole_1669 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Clole_3218 Xanthine/uracil/vitamin C permease K06901 pbuG; adenine/guanine/hypoxanthine permease
D Clole_2681 Chromate transporter K07240 chrA; chromate transporter
D Clole_2682 Chromate transporter K07240 chrA; chromate transporter
D Clole_2034 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Clole_2838 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D Clole_2837 Na/Pi-cotransporter II-related protein K03324 yjbB; phosphate:Na+ symporter
D Clole_4176 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clole_4178 arsenite-activated ATPase ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-]
D Clole_3968 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D Clole_2884 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D Clole_1901 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D Clole_0619 polysaccharide biosynthesis protein K06409 spoVB; stage V sporulation protein B
D Clole_3014 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Clole_2675 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Clole_1508 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D Clole_1906 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D Clole_4200 AzlC family protein K26605 azlC; branched chain amino acid efflux pump
D Clole_1907 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Clole_1509 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Clole_4199 branched-chain amino acid transport K26606 azlD; branched chain amino acid efflux pump
D Clole_1617 hypothetical protein K23675 fmnP; riboflavin transporter
D Clole_4230 proton-coupled thiamine transporter YuaJ K16789 thiT; thiamine transporter
D Clole_2330 cell cycle protein K03588 ftsW; cell division protein FtsW
D Clole_3125 hypothetical protein K23242 mntP; manganese efflux pump family protein
D Clole_0409 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D Clole_3166 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Clole_2003 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clole_2267 sodium ion-translocating decarboxylase, beta subunit K20509 madB; carboxybiotin decarboxylase [EC:7.2.4.1]
D Clole_2266 Pyruvate carboxylase K01571 oadA; oxaloacetate decarboxylase (Na+ extruding) subunit alpha [EC:7.2.4.2]
D Clole_2270 Propionyl-CoA carboxylase K01604 mmdA; methylmalonyl-CoA decarboxylase subunit alpha [EC:7.2.4.3]
D Clole_2268 biotin/lipoyl attachment domain-containing protein K23351 gcdC; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit gamma
D Clole_2269 sodium pump decarboxylase, gamma subunit K23352 gcdD; glutaconyl-CoA/methylmalonyl-CoA decarboxylase subunit delta
D Clole_3168 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Clole_3662 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D Clole_0087 secretion protein HlyD family protein K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D Clole_3929 nicotinamide mononucleotide transporter PnuC K03811 pnuC; nicotinamide mononucleotide transporter
D Clole_3346 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Clole_2720 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Clole_3258 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Clole_3257 FeoA family protein K04758 feoA; ferrous iron transport protein A
D Clole_3347 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Clole_3256 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Clole_2719 small GTP-binding protein K04759 feoB; ferrous iron transport protein B
D Clole_1381 MgtC/SapB transporter K07507 mgtC; putative Mg2+ transporter-C (MgtC) family protein
C 02044 Secretion system [BR:cle02044]
D Clole_1720 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Clole_1719 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Clole_1731 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Clole_1716 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Clole_1718 Type II secretion system F domain K02653 pilC; type IV pilus assembly protein PilC
D Clole_1723 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Clole_1717 twitching motility protein K02669 pilT; twitching motility protein PilT
D Clole_3766 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
D Clole_2116 competence protein ComEA helix-hairpin-helix repeat protein K02237 comEA; competence protein ComEA
D Clole_3132 dCMP deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Clole_2120 DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC
D Clole_3230 beta-lactamase domain protein K02238 comEC; competence protein ComEC
D Clole_3770 peptidase A24A prepilin type IV K02236 comC; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Clole_2439 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Clole_2440 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Clole_2294 type III secretion exporter K04061 flhB2; flagellar biosynthesis protein
D Clole_2460 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Clole_2458 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D Clole_2457 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Clole_2446 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D Clole_2443 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Clole_2442 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Clole_2441 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Clole_4032 hypothetical protein K11904 vgrG; type VI secretion system secreted protein VgrG
D Clole_3409 Protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Clole_2562 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Clole_3479 protein-export membrane protein SecD K12257 secDF; SecD/SecF fusion protein
D Clole_3566 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Clole_2561 protein-export membrane protein SecF K03074 secF; preprotein translocase subunit SecF
D Clole_2827 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Clole_3526 preprotein translocase, SecY subunit K03076 secY; preprotein translocase subunit SecY
D Clole_2306 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Clole_2308 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Clole_2899 preprotein translocase, YajC subunit K03210 yajC; preprotein translocase subunit YajC
D Clole_4270 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
C 02042 Bacterial toxins [BR:cle02042]
D Clole_1632 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Clole_2953 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Clole_0614 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:cle02022]
D Clole_1134 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Clole_1133 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Clole_0103 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Clole_0645 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Clole_3940 integral membrane sensor signal transduction histidine kinase K07650 cssS; two-component system, OmpR family, sensor histidine kinase CssS [EC:2.7.13.3]
D Clole_3939 two component transcriptional regulator, winged helix family K07770 cssR; two-component system, OmpR family, response regulator CssR
D Clole_2249 multi-sensor signal transduction histidine kinase K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
D Clole_2250 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE
D Clole_1673 two component transcriptional regulator, winged helix family K07775 resD; two-component system, OmpR family, response regulator ResD
D Clole_3775 integral membrane sensor signal transduction histidine kinase K07652 vicK; two-component system, OmpR family, sensor histidine kinase VicK [EC:2.7.13.3]
D Clole_3776 two component transcriptional regulator, winged helix family K07668 vicR; two-component system, OmpR family, response regulator VicR
D Clole_0359 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D Clole_0425 integral membrane sensor signal transduction histidine kinase K19081 braS; two-component system, OmpR family, sensor histidine kinase BraS/BceS [EC:2.7.13.3]
D Clole_0358 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D Clole_0410 two component transcriptional regulator, winged helix family K19082 braR; two-component system, OmpR family, response regulator protein BraR/BceR
D Clole_3065 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Clole_3066 integral membrane sensor signal transduction histidine kinase K14982 ciaH; two-component system, OmpR family, sensor histidine kinase CiaH [EC:2.7.13.3]
D Clole_1231 two component transcriptional regulator, winged helix family K14983 ciaR; two-component system, OmpR family, response regulator CiaR
D Clole_0032 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR
D Clole_0018 integral membrane sensor signal transduction histidine kinase K18940 arlS; two-component system, OmpR family, sensor histidine kinase ArlS [EC:2.7.13.3]
D Clole_0019 two component transcriptional regulator, winged helix family K18941 arlR; two-component system, OmpR family, response regulator ArlR
D Clole_0118 integral membrane sensor signal transduction histidine kinase K20487 nisK; two-component system, OmpR family, lantibiotic biosynthesis sensor histidine kinase NisK/SpaK [EC:2.7.13.3]
D Clole_1756 sporulation transcriptional activator Spo0A K07699 spo0A; two-component system, response regulator, stage 0 sporulation protein A
D Clole_3222 signal transduction histidine kinase, LytS K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D Clole_0495 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Clole_3221 two component transcriptional regulator, LytTR family K02477 K02477; two-component system, LytTR family, response regulator
D Clole_3645 response regulator receiver K02477 K02477; two-component system, LytTR family, response regulator
D Clole_2435 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Clole_2445 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_2134 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_0906 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_2436 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Clole_1147 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Clole_0570 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_2049 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_0505 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_0522 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_1014 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_1340 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_3690 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_3986 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_2591 integral membrane sensor signal transduction histidine kinase K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_0514 signal transduction histidine kinase, LytS K07718 yesM; two-component system, sensor histidine kinase YesM [EC:2.7.13.3]
D Clole_1341 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_0504 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_0515 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_0523 response regulator receiver protein K07720 yesN; two-component system, response regulator YesN
D Clole_1015 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_2050 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_3987 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_2590 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_0571 two component transcriptional regulator, AraC family K07720 yesN; two-component system, response regulator YesN
D Clole_4246 ANTAR domain protein K22010 pdtaR; two-component system, response regulator PdtaR
C 02035 Bacterial motility proteins [BR:cle02035]
D Clole_2435 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Clole_1114 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Clole_2434 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Clole_2433 CheC, inhibitor of MCP methylation K03410 cheC; chemotaxis protein CheC
D Clole_2432 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44]
D Clole_2261 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Clole_2436 CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Clole_2445 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_2134 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_0906 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Clole_1147 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Clole_0184 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0694 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0777 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0778 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_0651 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1528 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1144 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2684 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_1653 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2560 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2846 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3413 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3044 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Clole_4122 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3430 putative methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3868 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3990 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3649 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_3650 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_4204 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Clole_2458 hypothetical protein K02411 fliH; flagellar assembly protein FliH
D Clole_2457 ATPase, FliI/YscN family K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Clole_2456 flagellar export protein FliJ K02413 fliJ; flagellar protein FliJ
D Clole_2443 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Clole_2442 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Clole_2441 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Clole_2439 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Clole_2440 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Clole_2459 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Clole_2447 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Clole_2446 CheC, inhibitor of MCP methylation / FliN fusion protein K02417 fliN; flagellar motor switch protein FliN
D Clole_2460 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Clole_2461 flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Clole_2454 Flagellar hook-length control protein-like protein K02414 fliK; flagellar hook-length control protein FliK
D Clole_2463 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Clole_2462 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Clole_2453 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Clole_3606 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Clole_3605 flagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D Clole_3604 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D Clole_2452 flagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D Clole_3595 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Clole_3596 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Clole_3594 flagellar hook-associated protein 3 K02397 flgL; flagellar hook-associated protein 3 FlgL
D Clole_3569 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D Clole_3279 flagellin lysine-N-methylase K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D Clole_2904 hypothetical protein K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D Clole_3043 flagellin lysine-N-methylase K18475 fliB; lysine-N-methylase [EC:2.1.1.-]
D Clole_3591 flagellin domain protein K02406 fliC; flagellin
D Clole_1041 flagellin domain protein K02406 fliC; flagellin
D Clole_0848 flagellin domain protein K02406 fliC; flagellin
D Clole_3589 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2
D Clole_3588 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Clole_1040 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Clole_3573 FlgN family protein K02423 fliT; flagellar protein FliT
D Clole_2431 RNA polymerase, sigma 28 subunit, FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Clole_3933 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_2450 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA
D Clole_3934 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Clole_2449 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Clole_3593 Flagellar assembly factor FliW K13626 fliW; flagellar assembly factor FliW
D Clole_3598 flagellar biosynthesis anti-sigma factor protein FlgM K02398 flgM; negative regulator of flagellin synthesis FlgM
D Clole_3590 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D Clole_2451 flagellar FlbD family protein K02385 flbD; flagellar protein FlbD
D Clole_2438 GTP-binding signal recognition particle SRP54 G-domain K02404 flhF; flagellar biosynthesis protein FlhF
D Clole_2437 Cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D Clole_1717 twitching motility protein K02669 pilT; twitching motility protein PilT
D Clole_1719 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Clole_1731 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Clole_1716 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Clole_1718 Type II secretion system F domain K02653 pilC; type IV pilus assembly protein PilC
D Clole_1720 peptidase A24A prepilin type IV K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Clole_1723 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Clole_3766 type II secretion system protein E K02283 cpaF; pilus assembly protein CpaF [EC:7.4.2.8]
C 03037 Cilium and associated proteins [BR:cle03037]
D Clole_1999 sodium/hydrogen exchanger K23994 SLC9B1_2; solute carrier family 9B (sodium/hydrogen exchanger), member 1/2
C 04812 Cytoskeleton proteins [BR:cle04812]
D Clole_2094 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Clole_3607 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Clole_2327 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Clole_2098 Septum formation inhibitor MinC K03610 minC; septum site-determining protein MinC
D Clole_2099 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD
D Clole_2100 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor
D Clole_0842 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clole_0729 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clole_4263 Cobyrinic acid ac-diamide synthase K03496 parA; chromosome partitioning protein
D Clole_0730 ParB domain protein nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clole_4262 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Clole_4265 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cle04147]
D Clole_1665 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Clole_2829 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Clole_2835 glyceraldehyde-3-phosphate dehydrogenase, type I K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Clole_2834 Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D Clole_2251 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_1021 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_2583 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Clole_0627 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D Clole_1280 Peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Clole_1676 band 7 protein K07192 FLOT; flotillin
D Clole_3332 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Clole_2129 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Clole_1062 Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Clole_3329 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Clole_4236 IMP dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Clole_3548 translation elongation factor Tu K02358 tuf; elongation factor Tu
D Clole_1046 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Clole_1690 L-lactate dehydrogenase K00016 LDH; L-lactate dehydrogenase [EC:1.1.1.27]
D Clole_3880 o-succinylbenzoate--CoA ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Clole_3525 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Clole_2545 adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D Clole_2473 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Clole_2472 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Clole_0544 dihydropyrimidinase K01464 DPYS; dihydropyrimidinase [EC:3.5.2.2]
D Clole_2967 galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D Clole_2476 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Clole_0474 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D Clole_2194 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4238 Glutamine synthetase type III domain-containing protein K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_4245 glutamine synthetase, type I K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Clole_3654 Porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Clole_3865 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Clole_2083 Phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Clole_3207 Phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Clole_2833 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cle02048]
D Clole_1944 CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D Clole_0732 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0231 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0233 DNA-cytosine methyltransferase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D Clole_0275 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Clole_0739 HNH endonuclease K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Clole_1759 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Clole_2028 hypothetical protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]
D Clole_2519 ATPase associated with various cellular activities AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Clole_0235 ATPase associated with various cellular activities AAA_5 K07452 mcrB; 5-methylcytosine-specific restriction enzyme B [EC:3.1.21.-]
D Clole_2518 5-methylcytosine restriction system component-like protein K19147 mcrC; 5-methylcytosine-specific restriction enzyme subunit McrC
D Clole_0257 restriction endonuclease K07448 mrr; restriction system protein
D Clole_0996 restriction endonuclease K07448 mrr; restriction system protein
D Clole_3015 transcriptional modulator of MazE/toxin, MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
D Clole_3016 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI
D Clole_1296 death-on-curing family protein K07341 doc; death on curing protein
D Clole_2327 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Clole_2094 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Clole_3607 cell shape determining protein, MreB/Mrl family K03569 mreB; rod shape-determining protein MreB and related proteins
D Clole_1401 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D Clole_2841 cysteine desulfurase NifS K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2135 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Clole_2254 Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides [BR:cle04052]
D Clole_1542 Nicotinamide phosphoribosyltransferase K03462 NAMPT; nicotinamide phosphoribosyltransferase [EC:2.4.2.12]
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cle01504]
D Clole_1318 aminoglycoside 3-N-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D Clole_3275 Aminoglycoside N(3')-acetyltransferase K00662 aacC; aminoglycoside 3-N-acetyltransferase [EC:2.3.1.81]
D Clole_2607 GCN5-related N-acetyltransferase K18815 aac6-I; aminoglycoside 6'-N-acetyltransferase I [EC:2.3.1.82]
D Clole_2616 adenylyltransferase K05593 aadK; aminoglycoside 6-adenylyltransferase [EC:2.7.7.-]
D Clole_1972 Na+/H+ antiporter NhaC-like protein K18218 tet35; tetracycline resistance efflux pump
D Clole_1969 small GTP-binding protein K18220 tetM; ribosomal protection tetracycline resistance protein
D Clole_4207 ABC transporter related protein K18231 msr; macrolide transport system ATP-binding/permease protein
D Clole_3192 Erythromycin esterase K06880 ereA_B; erythromycin esterase [EC:3.1.1.-]
D Clole_2870 chloramphenicol acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D Clole_1986 Chloramphenicol O-acetyltransferase K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D Clole_3675 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Clole_2896 Beta-lactamase K02172 blaR1; bla regulator protein blaR1
D Clole_4055 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Clole_4196 cell envelope-related transcriptional attenuator K02172 blaR1; bla regulator protein blaR1
D Clole_0316 peptidase M56 BlaR1 K02172 blaR1; bla regulator protein blaR1
D Clole_2895 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_3676 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_4056 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_4197 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_0315 transcriptional repressor, CopY family K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D Clole_0068 copper amine oxidase-like domain-containing protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D Clole_2165 Serine-type D-Ala-D-Ala carboxypeptidase K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_0320 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K07260 vanY; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
D Clole_0032 two component transcriptional regulator, winged helix family K18349 vanRC; two-component system, OmpR family, response regulator VanR
D Clole_1514 alanine racemase K18348 vanT; serine/alanine racemase [EC:5.1.1.18 5.1.1.1]
D Clole_1511 D-alanine/D-alanine ligase K18856 vanC; D-alanine---D-serine ligase [EC:6.3.2.35]
D Clole_1512 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin K18866 vanXY; zinc D-Ala-D-Ala dipeptidase/carboxypeptidase [EC:3.4.13.22 3.4.17.14]
D Clole_3441 regulatory protein MarR K18909 mepR; MarR family transcriptional regulator, repressor for mepA
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cle00537]
D Clole_3865 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Clole_0627 Membrane dipeptidase K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cle03100]
D Clole_R0004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0078 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0060 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0138 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0017 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0023 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0112 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Clole_R0128 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0129 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0040 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0093 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0087 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0071 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0072 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Clole_R0080 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0083 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0125 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0121 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0136 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Clole_R0006 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clole_R0119 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clole_R0132 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clole_R0046 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Clole_R0082 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Clole_R0084 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Clole_R0027 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clole_R0056 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clole_R0089 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clole_R0094 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Clole_R0081 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0135 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0043 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0035 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0099 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0114 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Clole_R0026 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0039 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0067 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0086 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0092 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0020 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0066 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0095 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Clole_R0055 tRNA-His K14226 tRNA-His; tRNA His
D Clole_R0088 tRNA-His K14226 tRNA-His; tRNA His
D Clole_R0032 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clole_R0077 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clole_R0139 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Clole_R0028 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0130 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0048 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0068 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0091 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0110 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0111 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0098 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0097 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0069 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0070 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Clole_R0113 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0012 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0038 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0101 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0090 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0045 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Clole_R0117 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0122 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0145 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0085 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0010 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0051 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0133 tRNA-Met K14230 tRNA-Met; tRNA Met
D Clole_R0011 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Clole_R0052 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Clole_R0108 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Clole_R0096 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0044 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0116 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0100 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0073 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Clole_R0142 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0029 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0057 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0143 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0001 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Clole_R0103 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0008 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0134 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0049 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0127 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0106 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0104 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Clole_R0120 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Clole_R0124 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Clole_R0050 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Clole_R0107 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Clole_R0009 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Clole_R0131 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0144 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0047 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0123 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0007 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0118 tRNA-Val K14237 tRNA-Val; tRNA Val
D Clole_R0021 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0015 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0053 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0058 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0075 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0013 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0062 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0141 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0030 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0036 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Clole_R0018 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0033 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0126 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0079 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0137 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0014 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0024 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0037 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0061 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0064 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0054 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Clole_R0041 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0065 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0016 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0059 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0140 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0003 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0076 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0019 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0063 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0034 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0025 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Clole_R0074 ffs; SRP RNA; RNA component of signal recognition particle K01983 ffs; SRP RNA
D Clole_R0109 rnpB; RNA component of RNaseP K01978 rnpB; M1 RNA
D Clole_R0115 ssrA; tmRNA as predicted by Rfam (RF00023), score 162.42 K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Clole_1151 NADP-dependent oxidoreductase domain K19265 gpr; L-glyceraldehyde 3-phosphate reductase [EC:1.1.1.-]
D Clole_1288 Alcohol dehydrogenase (NADP(+)) K19955 adh2; alcohol dehydrogenase [EC:1.1.1.-]
D Clole_1267 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Clole_1268 Indolepyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Clole_1553 Saccharopine dehydrogenase K27502 E1.5.1.55; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D Clole_2026 beta-lactamase domain protein K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D Clole_0393 NAD(P)H dehydrogenase (quinone) K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17]
D Clole_2496 methionine-R-sulfoxide reductase K12267 msrAB; peptide methionine sulfoxide reductase msrA/msrB [EC:1.8.4.11 1.8.4.12]
D Clole_3106 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Clole_2695 Redoxin domain protein K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Clole_4026 peroxiredoxin K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26]
D Clole_2396 NADP-reducing hydrogenase subunit B K17992 hndB; NADP-reducing hydrogenase subunit HndB [EC:1.12.1.3]
D Clole_2397 NADH dehydrogenase (quinone) K18330 hndA; NADP-reducing hydrogenase subunit HndA [EC:1.12.1.3]
D Clole_2395 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D Clole_2394 hydrogenase, Fe-only K18332 hndD; NADP-reducing hydrogenase subunit HndD [EC:1.12.1.3]
D Clole_0392 Pirin domain protein K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D Clole_2668 Nitric oxide dioxygenase K05916 hmp; nitric oxide dioxygenase [EC:1.14.12.17]
D Clole_2224 Desulfoferrodoxin ferrous iron-binding region K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Clole_1992 Ferritin Dps family protein K02217 ftnA; ferritin [EC:1.16.3.2]
D Clole_0611 oxidoreductase FAD/NAD(P)-binding domain protein K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1]
D Clole_1657 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Clole_2018 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Clole_1691 anaerobic ribonucleoside-triphosphate reductase activating protein K04068 nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]
D Clole_1080 pyruvate formate-lyase activating enzyme K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Clole_1990 Radical SAM domain protein K04070 pflX; putative pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Clole_0623 Cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]
D Clole_1135 rRNA (guanine-N(2)-)-methyltransferase K07444 ypsC; putative N6-adenine-specific DNA methylase [EC:2.1.1.-]
D Clole_4220 Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D Clole_0655 Galactoside O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D Clole_3466 putative beta-lysine N-acetyltransferase K21935 ablB; beta-lysine N6-acetyltransferase [EC:2.3.1.264]
D Clole_3246 GCN5-related N-acetyltransferase K03830 yafP; putative acetyltransferase [EC:2.3.1.-]
D Clole_0149 transglutaminase domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D Clole_3869 transglutaminase domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D Clole_3361 glycosidase related protein K16212 mgp; 4-O-beta-D-mannosyl-D-glucose phosphorylase [EC:2.4.1.281]
D Clole_3363 glycosidase related protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D Clole_3404 glycosidase related protein K18785 mp2; beta-1,4-mannooligosaccharide/beta-1,4-mannosyl-N-acetylglucosamine phosphorylase [EC:2.4.1.319 2.4.1.320]
D Clole_3235 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Clole_2341 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Clole_0893 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Clole_3991 phosphatidate cytidylyltransferase K18678 VTE5; phytol kinase [EC:2.7.1.182]
D Clole_3579 adenylylsulfate kinase K23148 E2.7.1.224; cytidine diphosphoramidate kinase [EC:2.7.1.224]
D Clole_1785 DAK2 domain fusion protein YloV K07030 fakA; fatty acid kinase [EC:2.7.2.18]
D Clole_0850 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Clole_2816 RNA-directed DNA polymerase K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]
D Clole_3370 Conserved hypothetical protein CHP00159 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Clole_3472 protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108]
D Clole_3996 Pyruvate, water dikinase K22579 rph; rifampicin phosphotransferase [EC:2.7.9.6]
D Clole_1463 anti-sigma regulatory factor, serine/threonine protein kinase K06379 spoIIAB; stage II sporulation protein AB (anti-sigma F factor) [EC:2.7.11.1]
D Clole_1648 HPr kinase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Clole_1090 alpha/beta hydrolase fold protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Clole_3707 Sialate O-acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D Clole_0531 protein of unknown function DUF303 acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D Clole_2593 protein of unknown function DUF303 acetylesterase K05970 SIAE; sialate O-acetylesterase [EC:3.1.1.53]
D Clole_0708 esterase K03930 estA; putative tributyrin esterase [EC:3.1.1.-]
D Clole_3401 protein serine/threonine phosphatase K06382 spoIIE; stage II sporulation protein E [EC:3.1.3.16]
D Clole_2566 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Clole_1729 HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 K07015 yqeG; putative phosphatase [EC:3.1.3.-]
D Clole_3308 protein of unknown function DUF89 K09116 K09116; damage-control phosphatase, subfamily I [EC:3.1.3.-]
D Clole_1075 putative phosphoesterase K22927 gdpP; cyclic-di-AMP phosphodiesterase [EC:3.1.4.59]
D Clole_2057 7TM receptor with intracellular metal dependent phosphohydrolase K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D Clole_0641 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Clole_0575 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Clole_2864 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Clole_3414 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Clole_0518 Endo-1,4-beta-xylanase K01181 E3.2.1.8; endo-1,4-beta-xylanase [EC:3.2.1.8]
D Clole_3977 glycoside hydrolase family 16 K01216 bglS; licheninase [EC:3.2.1.73]
D Clole_3981 glycoside hydrolase family 16 K01216 bglS; licheninase [EC:3.2.1.73]
D Clole_0695 Arabinogalactan endo-1,4-beta-galactosidase K01224 E3.2.1.89; arabinogalactan endo-1,4-beta-galactosidase [EC:3.2.1.89]
D Clole_3946 Glucuronoarabinoxylan endo-1,4-beta-xylanase K15924 xynC; glucuronoarabinoxylan endo-1,4-beta-xylanase [EC:3.2.1.136]
D Clole_0558 Alpha-glucuronidase K01235 aguA; alpha-glucuronidase [EC:3.2.1.139]
D Clole_3660 protein of unknown function DUF291 K18578 CEL74A; xyloglucan-specific exo-beta-1,4-glucanase [EC:3.2.1.155]
D Clole_0527 glycoside hydrolase family 8 K15531 rexA; oligosaccharide reducing-end xylanase [EC:3.2.1.156]
D Clole_1375 glycosyl hydrolase family 88 K15532 yteR; unsaturated rhamnogalacturonyl hydrolase [EC:3.2.1.172]
D Clole_2676 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D Clole_1013 glycoside hydrolase family 31 K01811 xylS; alpha-D-xyloside xylohydrolase [EC:3.2.1.177]
D Clole_2825 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_0990 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_0760 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_0306 N-acetylmuramoyl-L-alanine amidase family 2 K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_0841 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K01447 xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Clole_1773 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Clole_2961 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Clole_2527 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Clole_1564 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Clole_0562 polysaccharide deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D Clole_2044 delta-lactam-biosynthetic de-N-acetylase K01567 pdaA; peptidoglycan-N-acetylmuramic acid deacetylase [EC:3.5.1.-]
D Clole_1964 Endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Clole_2651 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Clole_1264 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Clole_0128 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Clole_0147 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Clole_3871 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Clole_2962 UV-endonuclease UvdE K13281 uvsE; UV DNA damage endonuclease [EC:3.-.-.-]
D Clole_3036 radical SAM domain-containing protein K03716 splB; spore photoproduct lyase [EC:4.1.99.14]
D Clole_0664 67 kDa myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D Clole_0547 67 kDa myosin-cross-reactive antigen family protein K10254 ohyA; oleate hydratase [EC:4.2.1.53]
D Clole_3020 YjeF-related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Clole_3681 cellulose-binding family II K18197 yesW; rhamnogalacturonan endolyase [EC:4.2.2.23]
D Clole_4164 Cys/Met metabolism pyridoxal-phosphate-dependent protein K26365 cangL; canavanine-gamma-lyase [EC:4.4.1.43]
D Clole_3362 N-acylglucosamine 2-epimerase K16213 cbe; cellobiose epimerase [EC:5.1.3.11]
D Clole_3974 AMP-dependent synthetase and ligase K22319 oleC; olefin beta-lactone synthetase [EC:6.1.3.1]
D Clole_2086 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Clole_2085 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Clole_0352 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Clole_2090 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Clole_0201 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Clole_1202 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Clole_2478 calcium-translocating P-type ATPase, PMCA-type K01537 ATP2C; P-type Ca2+ transporter type 2C [EC:7.2.2.10]
D Clole_3672 cadmium-translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
D Clole_3304 ATPase, P-type (transporting), HAD superfamily, subfamily IC K12952 ctpE; cation-transporting P-type ATPase E [EC:7.2.2.-]
C 99981 Carbohydrate metabolism
D Clole_1908 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D Clole_2510 CBS domain containing protein K04767 acuB; acetoin utilization protein AcuB
C 99982 Energy metabolism
D Clole_1017 hypothetical protein K05337 fer; ferredoxin
D Clole_3008 protein of unknown function DUF1271 K05337 fer; ferredoxin
D Clole_2087 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Clole_2088 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Clole_2089 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Clole_2840 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D Clole_3283 SUF system FeS assembly protein, NifU family K04488 iscU; nitrogen fixation protein NifU and related proteins
D Clole_0457 nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Clole_0369 oxidoreductase/nitrogenase component 1 K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
C 99983 Lipid metabolism
D Clole_3267 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Clole_1641 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Clole_1635 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
D Clole_3631 degV family protein K25232 fakB; fatty acid kinase fatty acid binding subunit
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Clole_4081 Ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter
D Clole_0472 Ethanolamine utilization protein EutH K04023 eutH; ethanolamine transporter
D Clole_4090 microcompartments protein K04026 eutL; ethanolamine utilization protein EutL
D Clole_4094 ethanolamine utilization protein, EutP K04029 eutP; ethanolamine utilization protein EutP
D Clole_4080 Ethanolamine utilization EutQ family protein K04030 eutQ; ethanolamine utilization protein EutQ
D Clole_4095 microcompartments protein K04031 eutS; ethanolamine utilization protein EutS
D Clole_2286 protein of unknown function UPF0001 K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Clole_3123 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D Clole_3794 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
D Clole_0622 Lysylphosphatidylglycerol synthetase/UPF0104 K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
D Clole_3007 AbgT transporter K12942 abgT; aminobenzoyl-glutamate transport protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Clole_0610 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Clole_0159 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Clole_0160 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Clole_3118 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Clole_0931 phage antirepressor protein K07741 antB; anti-repressor protein
D Clole_0785 phage antirepressor protein K07741 antB; anti-repressor protein
D Clole_2797 phage antirepressor protein K07741 antB; anti-repressor protein
D Clole_0453 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1
D Clole_0433 nitrogen regulatory protein P-II K02589 nifHD1; nitrogen regulatory protein PII 1
D Clole_0454 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2
D Clole_0434 nitrogen regulatory protein P-II K02590 nifHD2; nitrogen regulatory protein PII 2
D Clole_1616 Tex-like protein K06959 tex; protein Tex
D Clole_1769 protein of unknown function DUF370 K09777 remA; extracellular matrix regulatory protein A
C 99974 Translation
C 99975 Protein processing
D Clole_4214 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D Clole_1123 trigger factor K03545 tig; trigger factor
D Clole_2819 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Clole_2322 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Clole_1082 Negative regulator of genetic competence K16511 mecA1_2; adapter protein MecA 1/2
C 99976 Replication and repair
D Clole_2093 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Clole_2293 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease
D Clole_1683 Excinuclease ABC C subunit domain protein K07461 K07461; putative endonuclease
D Clole_2321 DNA protecting protein DprA K04096 smf; DNA processing protein
D Clole_2766 Terminase small subunit K07474 xtmA; phage terminase small subunit
D Clole_0967 phage terminase, large subunit, PBSX family K06909 xtmB; phage terminase large subunit
D Clole_2885 MgsA AAA+ ATPase domain-containing protein K07478 ycaJ; putative ATPase
D Clole_1408 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase
D Clole_2624 phage/plasmid primase, P4 family K06919 K06919; putative DNA primase/helicase
D Clole_3741 Bifunctional DNA primase/polymerase K06919 K06919; putative DNA primase/helicase
D Clole_2894 Integrase catalytic region K07482 K07482; transposase, IS30 family
D Clole_2191 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clole_2866 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clole_2994 hypothetical protein K07483 K07483; transposase
D Clole_4011 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clole_1619 hypothetical protein K07483 K07483; transposase
D Clole_1899 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clole_1948 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clole_0536 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clole_0189 transposase IS3/IS911 family protein K07483 K07483; transposase
D Clole_0028 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Clole_2169 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Clole_3338 transposase IS204/IS1001/IS1096/IS1165 family protein K07485 K07485; transposase
D Clole_3831 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Clole_2207 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Clole_2867 Integrase catalytic region K07497 K07497; putative transposase
D Clole_2993 Integrase catalytic region K07497 K07497; putative transposase
D Clole_3393 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Clole_3720 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Clole_4012 Integrase catalytic region K07497 K07497; putative transposase
D Clole_1618 Integrase catalytic region K07497 K07497; putative transposase
D Clole_1412 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Clole_0198 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Clole_0537 Integrase catalytic region K07497 K07497; putative transposase
D Clole_1900 Integrase catalytic region K07497 K07497; putative transposase
D Clole_1949 transposase K07497 K07497; putative transposase
D Clole_1950 transposase IS3/IS911 family protein K07497 K07497; putative transposase
D Clole_0188 Integrase catalytic region K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D Clole_3435 Rhodanese-like protein K03972 pspE; phage shock protein E
D Clole_3437 Rhodanese-like protein K03972 pspE; phage shock protein E
D Clole_1031 Uncharacterized protein family UPF0133 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Clole_3340 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Clole_1995 amino acid permease-associated region K03294 TC.APA; basic amino acid/polyamine antiporter, APA family
D Clole_4131 SSS sodium solute transporter superfamily K03307 TC.SSS; solute:Na+ symporter, SSS family
D Clole_4255 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Clole_1516 branched-chain amino acid transport system II carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
C 99978 Cell growth
D Clole_1043 sigmaK-factor processing regulatory BofA K06317 bofA; inhibitor of the pro-sigma K processing machinery
D Clole_2722 hypothetical protein K06333 cotJB; spore coat protein JB
D Clole_2804 manganese containing catalase K06334 cotJC; spore coat protein JC
D Clole_4269 single-stranded nucleic acid binding R3H domain-containing protein K06346 jag; spoIIIJ-associated protein
D Clole_3694 nucleoside recognition domain protein K06373 spmA; spore maturation protein A
D Clole_3695 nucleoside recognition domain-containing protein K06374 spmB; spore maturation protein B
D Clole_1462 anti-sigma-factor antagonist K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D Clole_2124 hypothetical protein K06385 spoIIP; stage II sporulation protein P
D Clole_3830 stage II sporulation protein R K06387 spoIIR; stage II sporulation protein R
D Clole_1735 stage III sporulation protein AA K06390 spoIIIAA; stage III sporulation protein AA
D Clole_1736 Sporulation stage III protein AB K06391 spoIIIAB; stage III sporulation protein AB
D Clole_1737 stage III sporulation AC family protein K06392 spoIIIAC; stage III sporulation protein AC
D Clole_1738 stage III sporulation protein AD K06393 spoIIIAD; stage III sporulation protein AD
D Clole_1739 Sporulation stage III protein AE K06394 spoIIIAE; stage III sporulation protein AE
D Clole_1741 stage III sporulation protein AG K06396 spoIIIAG; stage III sporulation protein AG
D Clole_1742 hypothetical protein K06397 spoIIIAH; stage III sporulation protein AH
D Clole_2288 stage IV sporulation protein A K06398 spoIVA; stage IV sporulation protein A
D Clole_3165 Recombinase K06400 spoIVCA; site-specific DNA recombinase
D Clole_2803 Recombinase K06400 spoIVCA; site-specific DNA recombinase
D Clole_2539 stage V sporulation protein AA K06403 spoVAA; stage V sporulation protein AA
D Clole_2538 stage V sporulation protein AB K06404 spoVAB; stage V sporulation protein AB
D Clole_2537 stage V sporulation protein AC K06405 spoVAC; stage V sporulation protein AC
D Clole_2536 stage V sporulation protein AD K06406 spoVAD; stage V sporulation protein AD
D Clole_2535 stage V sporulation protein AE K06407 spoVAE; stage V sporulation protein AE
D Clole_1025 GerA spore germination protein K06408 spoVAF; stage V sporulation protein AF
D Clole_2150 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K06410 spoVFA; dipicolinate synthase subunit A
D Clole_2149 flavoprotein K06411 spoVFB; dipicolinate synthase subunit B
D Clole_1099 SpoVG family protein K06412 spoVG; stage V sporulation protein G
D Clole_1800 SpoVR family protein K06415 spoVR; stage V sporulation protein R
D Clole_1452 small acid-soluble spore protein alpha/beta type K06418 SASP-A; small acid-soluble spore protein A (major alpha-type SASP)
D Clole_4137 sporulation peptidase YabG K06436 yabG; spore coat assemly protein
D Clole_2171 hypothetical protein K06437 yknT; sigma-E controlled sporulation protein
D Clole_2055 sporulation protein YqfD K06438 yqfD; similar to stage IV sporulation protein
D Clole_3832 germination protein, Ger(x)C family K06297 gerKC; spore germination protein KC
D Clole_2119 Lipoprotein LpqB, GerMN domain K06298 gerM; germination protein M
D Clole_3834 GerA spore germination protein K06310 yndD; spore germination protein
C 99993 Cell motility
D Clole_3917 TfoX domain-containing protein K07343 tfoX; DNA transformation protein and related proteins
C 99995 Signaling proteins
D Clole_1229 stress protein K05795 terD; tellurium resistance protein TerD
D Clole_1230 stress protein K05795 terD; tellurium resistance protein TerD
D Clole_2860 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Clole_2068 ACT domain-containing protein K07166 K07166; ACT domain-containing protein
D Clole_2056 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Clole_1798 putative serine protein kinase, PrkA K07180 prkA; serine protein kinase
C 99992 Structural proteins
D Clole_2941 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Clole_3139 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D Clole_2645 secretion protein HlyD family protein K02005 ABC.CD.TX; HlyD family secretion protein
D Clole_2669 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
D Clole_0193 hypothetical protein K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D Clole_1141 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Clole_0479 BFD domain protein (2Fe-2S)-binding domain protein K02192 bfd; bacterioferritin-associated ferredoxin
D Clole_2025 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D Clole_0251 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D Clole_2529 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D Clole_0447 DNA binding domain protein, excisionase family K07219 K07219; putative molybdopterin biosynthesis protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Clole_2989 PHP domain protein K04477 ycdX; putative hydrolase
D Clole_4227 Patatin K07001 K07001; NTE family protein
D Clole_1427 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 K07025; putative hydrolase of the HAD superfamily
D Clole_3120 Haloacid dehalogenase domain protein hydrolase K07025 K07025; putative hydrolase of the HAD superfamily
D Clole_3286 FeS assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D Clole_3636 ribonuclease BN K07058 K07058; membrane protein
D Clole_0699 LemA family protein K03744 lemA; LemA protein
D Clole_0182 LemA family protein K03744 lemA; LemA protein
D Clole_3554 protein of unknown function DUF218 K03748 sanA; SanA protein
D Clole_3508 SNARE associated Golgi protein-like protein K03975 dedA; membrane-associated protein
D Clole_0060 hypothetical protein K01421 yhgE; putative membrane protein
D Clole_1052 protein of unknown function DUF368 K08974 K08974; putative membrane protein
D Clole_3249 hypothetical protein K08986 ycgQ; putative membrane protein
D Clole_0631 cobalamin synthesis protein P47K K08986 ycgQ; putative membrane protein
D Clole_2986 transporter, putative K13256 psiE; protein PsiE
D Clole_3431 alkylphosphonate utilization operon protein PhnA K06193 phnA; protein PhnA
C 99997 Function unknown
D Clole_2563 Radical SAM domain protein K06871 K06871; uncharacterized protein
D Clole_0093 Radical SAM domain protein K06871 K06871; uncharacterized protein
D Clole_0698 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Clole_4174 protein of unknown function DUF477 K06872 K06872; uncharacterized protein
D Clole_0992 metal dependent phosphohydrolase K06885 K06885; uncharacterized protein
D Clole_1936 hypothetical protein K06889 K06889; uncharacterized protein
D Clole_1087 protein of unknown function UPF0005 K06890 K06890; uncharacterized protein
D Clole_2033 protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D Clole_0323 protein of unknown function DUF134 K06933 K06933; uncharacterized protein
D Clole_1915 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Clole_2220 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Clole_1581 metal-dependent phosphohydrolase HD sub domain K06950 K06950; uncharacterized protein
D Clole_3109 sodium:dicarboxylate symporter K06956 K06956; uncharacterized protein
D Clole_2304 UPF0109 protein K06960 K06960; uncharacterized protein
D Clole_1775 peptidase membrane zinc metallopeptidase K06973 K06973; uncharacterized protein
D Clole_4064 GCN5-related N-acetyltransferase K06976 K06976; uncharacterized protein
D Clole_0059 MMPL domain protein K07003 K07003; uncharacterized protein
D Clole_1971 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein K07005 K07005; uncharacterized protein
D Clole_1064 phosphotransferase system, EIIC K07035 K07035; uncharacterized protein
D Clole_2231 amidohydrolase 2 K07045 K07045; uncharacterized protein
D Clole_4249 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon domain K07069 K07069; uncharacterized protein
D Clole_0580 Nucleotidyltransferase K07074 K07074; uncharacterized protein
D Clole_0581 Nucleotidyltransferase K07074 K07074; uncharacterized protein
D Clole_1521 NADP-dependent oxidoreductase domain K07079 K07079; uncharacterized protein
D Clole_0885 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Clole_1911 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Clole_1116 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Clole_3200 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Clole_2179 metallophosphoesterase K07096 K07096; uncharacterized protein
D Clole_1559 hypothetical protein K07097 K07097; uncharacterized protein
D Clole_1390 metallophosphoesterase K07098 K07098; uncharacterized protein
D Clole_2514 metallophosphoesterase K07098 K07098; uncharacterized protein
D Clole_2078 metallophosphoesterase K07099 K07099; uncharacterized protein
D Clole_1063 3H domain-containing protein K07105 K07105; uncharacterized protein
D Clole_4181 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Clole_1279 short-chain dehydrogenase/reductase SDR K07124 K07124; uncharacterized protein
D Clole_2492 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Clole_1904 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K07137 K07137; uncharacterized protein
D Clole_2077 Conserved hypothetical protein CHP01212 K07139 K07139; uncharacterized protein
D Clole_1131 Conserved hypothetical protein CHP01212 K07139 K07139; uncharacterized protein
D Clole_0486 protein of unknown function DUF161 K07149 K07149; uncharacterized protein
D Clole_2522 hypothetical protein K07149 K07149; uncharacterized protein
D Clole_1394 protein of unknown function DUF554 K07150 K07150; uncharacterized protein
D Clole_4271 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Clole_2168 putative tRNA binding protein K09117 K09117; uncharacterized protein
D Clole_2069 protein of unknown function DUF711 K09157 K09157; uncharacterized protein
D Clole_3487 Protein of unknown function DUF2075 K09384 K09384; uncharacterized protein
D Clole_3993 hypothetical protein K09707 K09707; uncharacterized protein
D Clole_0354 hypothetical protein K09707 K09707; uncharacterized protein
D Clole_3639 protein of unknown function DUF342 K09749 K09749; uncharacterized protein
D Clole_0305 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D Clole_2844 Protein of unknown function DUF2225 K09766 K09766; uncharacterized protein
D Clole_1016 Protein of unknown function DUF2225 K09766 K09766; uncharacterized protein
D Clole_2907 protein of unknown function DUF188 K09768 K09768; uncharacterized protein
D Clole_0012 protein of unknown function DUF327 K09770 K09770; uncharacterized protein
D Clole_1748 acid phosphatase/vanadium-dependent haloperoxidase related protein K09775 K09775; uncharacterized protein
D Clole_2075 protein of unknown function DUF378 K09779 K09779; uncharacterized protein
D Clole_1799 protein of unknown function DUF444 K09786 K09786; uncharacterized protein
D Clole_0942 protein of unknown function DUF444 K09786 K09786; uncharacterized protein
D Clole_2307 helix-turn-helix protein YlxM/p13 family protein K09787 K09787; uncharacterized protein
D Clole_4051 protein of unknown function DUF454 K09790 K09790; uncharacterized protein
D Clole_0144 protein of unknown function DUF454 K09790 K09790; uncharacterized protein
D Clole_3942 Heavy metal transport/detoxification protein K09792 K09792; uncharacterized protein
D Clole_0925 RNA binding S1 domain protein K00243 K00243; uncharacterized protein
D Clole_3105 protein of unknown function DUF328 K09861 K09861; uncharacterized protein
D Clole_0475 protein of unknown function DUF1006 K09927 K09927; uncharacterized protein
D Clole_0260 protein of unknown function DUF1680 K09955 K09955; uncharacterized protein
D Clole_0429 urea carboxylase-associated protein 2 K09967 K09967; uncharacterized protein
D Clole_0430 urea carboxylase-associated protein 1 K09967 K09967; uncharacterized protein
D Clole_0088 GumN family protein K09973 K09973; uncharacterized protein
D Clole_2259 DNA polymerase B exonuclease K07502 yprB; uncharacterized protein
D Clole_2108 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein
D Clole_0966 protein of unknown function DUF464 K07584 ysxB; uncharacterized protein
D Clole_2416 protein of unknown function DUF448 K07742 ylxR; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 29, 2024