+D GENES KO
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KEGG Orthology (KO) - Calditerrivibrio nitroreducens
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:cni00010]
D Calni_1083 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Calni_1448 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Calni_1216 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Calni_1385 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Calni_1933 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Calni_1303 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Calni_1594 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Calni_2053 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Calni_0868 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Calni_1122 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Calni_1845 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Calni_2058 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_0900 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Calni_1986 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_0465 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_0283 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_1987 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0466 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0284 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0865 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0290 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_1989 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Calni_1381 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Calni_0829 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:cni00020]
D Calni_1272 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Calni_1064 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Calni_0986 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Calni_0462 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_1986 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_0465 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_0283 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_1987 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0466 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0284 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0467 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Calni_0285 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain K00177 korC; 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3]
D Calni_0464 2-oxoglutarate ferredoxin oxidoreductase subunit delta K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Calni_0282 2-oxoglutarate ferredoxin oxidoreductase, delta subunit K00176 korD; 2-oxoglutarate ferredoxin oxidoreductase subunit delta [EC:1.2.7.3]
D Calni_0354 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Calni_0353 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Calni_1264 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Calni_1263 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Calni_1266 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Calni_1265 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Calni_0987 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Calni_0380 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Calni_0463 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Calni_0495 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Calni_0829 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Calni_0900 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
C 00030 Pentose phosphate pathway [PATH:cni00030]
D Calni_1448 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Calni_1278 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Calni_0419 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D Calni_1031 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D Calni_0593 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Calni_1989 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Calni_1381 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Calni_0239 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Calni_1933 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Calni_1385 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Calni_1216 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:cni00040]
D Calni_2007 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Calni_1635 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Calni_1278 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D Calni_1478 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
C 00051 Fructose and mannose metabolism [PATH:cni00051]
D Calni_1381 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Calni_0991 nucleotidyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Calni_1184 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Calni_1168 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Calni_1961 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Calni_1166 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Calni_1962 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Calni_1478 class II aldolase/adducin family protein K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17]
D Calni_1216 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Calni_1385 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Calni_1933 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Calni_1303 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D Calni_0593 ribose-5-phosphate isomerase K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D Calni_1425 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Calni_1424 PTS system sorbose subfamily IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Calni_1423 hypothetical protein K02795 manY; mannose PTS system EIIC component
D Calni_1422 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
C 00052 Galactose metabolism [PATH:cni00052]
D Calni_1643 UDP-glucose--hexose-1-phosphateuridylyltransfera se K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Calni_0166 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Calni_1635 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Calni_1989 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Calni_1381 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Calni_1083 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Calni_1216 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00053 Ascorbate and aldarate metabolism
D Calni_2007 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
C 00500 Starch and sucrose metabolism [PATH:cni00500]
D Calni_1635 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Calni_1164 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Calni_1709 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D Calni_1641 (1->4)-alpha-D-glucan branching enzyme K16149 K16149; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D Calni_0992 alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1]
D Calni_1644 4-alpha-glucanotransferase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25]
D Calni_1989 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Calni_1381 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Calni_1083 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Calni_1448 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:cni00520]
D Calni_0410 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Calni_1441 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10]
D Calni_0409 glucosamine-1-phosphate N-acetyltransferase; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Calni_0298 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Calni_0129 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Calni_1178 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Calni_1806 oxidoreductase domain protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Calni_0511 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Calni_1805 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D Calni_1804 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
D Calni_0837 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Calni_0709 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Calni_0722 pseudaminic acid biosynthesis N-acetyl transferase K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D Calni_0714 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D Calni_0723 N-acetylneuraminate synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D Calni_1083 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Calni_1989 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Calni_1381 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Calni_1635 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Calni_2007 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Calni_1643 UDP-glucose--hexose-1-phosphateuridylyltransfera se K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D Calni_0166 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Calni_1425 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Calni_1424 PTS system sorbose subfamily IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Calni_1423 hypothetical protein K02795 manY; mannose PTS system EIIC component
D Calni_1422 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D Calni_1448 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Calni_0991 nucleotidyltransferase K16881 K16881; mannose-1-phosphate guanylyltransferase / phosphomannomutase [EC:2.7.7.13 5.4.2.8]
D Calni_1184 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Calni_1168 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Calni_1961 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Calni_1964 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Calni_1798 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Calni_1166 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Calni_1962 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Calni_1164 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Calni_1163 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
C 00620 Pyruvate metabolism [PATH:cni00620]
D Calni_0865 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0290 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0900 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Calni_1986 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_0465 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_0283 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_1987 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0466 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0284 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_0765 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Calni_0766 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Calni_1845 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Calni_1067 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Calni_0234 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Calni_0235 biotin carboxylase; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Calni_0565 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Calni_0050 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Calni_0286 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Calni_0213 Acetyl-CoA hydrolase K01067 E3.1.2.1; acetyl-CoA hydrolase [EC:3.1.2.1]
D Calni_1203 metallo-beta-lactamase family protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Calni_0339 beta-lactamase domain-containing protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D Calni_1796 Protein of unknown function DUF2088 K22373 larA; lactate racemase [EC:5.1.2.1]
D Calni_0732 malic protein domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Calni_1022 allosteric NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D Calni_0495 pyruvate carboxylase K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D Calni_0463 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Calni_0987 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2]
D Calni_0380 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D Calni_0829 phosphoenolpyruvate carboxykinase (ATP) K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D Calni_2058 pyruvate phosphate dikinase K01006 ppdK; pyruvate, orthophosphate dikinase [EC:2.7.9.1]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Calni_0870 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Calni_0490 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Calni_0672 pyruvate carboxyltransferase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:cni00630]
D Calni_0865 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0290 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0463 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Calni_1272 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1]
D Calni_1064 aconitase K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D Calni_0986 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Calni_1046 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Calni_0564 propionyl-CoA carboxylase carboxyltransferase subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D Calni_0567 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Calni_1348 FAD linked oxidase domain protein K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14]
D Calni_1349 protein of unknown function DUF224 cysteine-rich region domain protein K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14]
D Calni_0206 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein K00015 gyaR; glyoxylate reductase [EC:1.1.1.26]
D Calni_0781 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Calni_0750 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Calni_1198 HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18]
D Calni_1585 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Calni_0592 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_0420 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
C 00640 Propanoate metabolism [PATH:cni00640]
D Calni_0865 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0290 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0765 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Calni_0766 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_0343 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Calni_0432 quinone oxidoreductase, YhdH/YhfP family K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-]
D Calni_1067 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Calni_0234 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Calni_0235 biotin carboxylase; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Calni_0565 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Calni_0050 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Calni_0564 propionyl-CoA carboxylase carboxyltransferase subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D Calni_1046 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Calni_0567 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Calni_0353 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Calni_0354 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Calni_0986 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99]
C 00650 Butanoate metabolism [PATH:cni00650]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Calni_0350 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Calni_0342 short chain enoyl-CoA hydratase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Calni_1274 Enoyl-CoA hydratase/isomerase K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D Calni_0343 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Calni_0775 butyrate kinase K00929 buk; butyrate kinase [EC:2.7.2.7]
D Calni_0776 Phosphate butyryltransferase K00634 ptb; phosphate butyryltransferase [EC:2.3.1.19]
D Calni_1264 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Calni_1263 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Calni_1266 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Calni_1265 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Calni_0900 pyruvate ferredoxin/flavodoxin oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-]
D Calni_1986 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_0465 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_0283 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein K00174 korA; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3 1.2.7.11]
D Calni_1987 pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0466 2-oxoglutarate ferredoxin oxidoreductase, beta subunit K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_0284 thiamine pyrophosphate TPP-binding domain-containing protein K00175 korB; 2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:1.2.7.3 1.2.7.11]
D Calni_1355 3-oxoacid CoA-transferase, B subunit K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D Calni_1356 3-hydroxybutyrate dehydrogenase K00019 BDH1; 3-hydroxybutyrate dehydrogenase [EC:1.1.1.30]
D Calni_0832 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Calni_0831 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:cni00660]
D Calni_0832 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Calni_0831 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Calni_0353 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D Calni_0354 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D Calni_2034 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Calni_2035 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Calni_1247 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism [PATH:cni00562]
D Calni_1270 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Calni_1303 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:cni00190]
D Calni_0312 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2]
D Calni_0313 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2]
D Calni_0314 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2]
D Calni_0315 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2]
D Calni_0316 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2]
D Calni_0317 NADH dehydrogenase (quinone) K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2]
D Calni_0318 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2]
D Calni_0320 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2]
D Calni_0322 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2]
D Calni_0323 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2]
D Calni_0324 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2]
D Calni_0325 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2]
D Calni_0326 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2]
D Calni_1548 NAD(P)-dependent nickel-iron dehydrogenase diaphorase component subunit HoxE K05586 hoxE; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D Calni_1550 NAD(P)-dependent nickel-iron dehydrogenase diaphorase component subunit HoxU K05588 hoxU; bidirectional [NiFe] hydrogenase diaphorase subunit [EC:7.1.1.2]
D Calni_0321 NADH-quinone oxidoreductase, chain I K03941 NDUFS8; NADH dehydrogenase (ubiquinone) Fe-S protein 8 [EC:7.1.1.2]
D Calni_0553 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K03885 ndh; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Calni_1264 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D Calni_1263 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D Calni_1266 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D Calni_1265 succinate dehydrogenase hydrophobic membrane anchor protein K00242 sdhD; succinate dehydrogenase membrane anchor subunit
D Calni_0818 Cytochrome-c oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Calni_0819 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Calni_1520 cytochrome c class I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Calni_1589 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Calni_1587 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Calni_1588 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Calni_1590 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Calni_1586 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Calni_1472 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Calni_1591 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Calni_1592 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Calni_1471 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Calni_0065 Inorganic diphosphatase K15986 ppaC; manganese-dependent inorganic pyrophosphatase [EC:3.6.1.1]
D Calni_0534 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:cni00680]
D Calni_1870 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K15022 fdhB; formate dehydrogenase (NADP+) beta subunit [EC:1.17.1.10]
D Calni_0592 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Calni_1122 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Calni_0463 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Calni_1933 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D Calni_1385 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Calni_1216 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Calni_0765 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
D Calni_0766 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Calni_0865 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0290 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_2053 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Calni_0868 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Calni_1129 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00910 Nitrogen metabolism [PATH:cni00910]
D Calni_1872 periplasmic nitrate reductase subunit NapA apoprotein K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1]
D Calni_0484 nitrite reductase (cytochrome; ammonia-forming) K03385 nrfA; nitrite reductase (cytochrome c-552) [EC:1.7.2.2]
D Calni_0685 Mo-nitrogenase MoFe protein subunit NifD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
D Calni_0686 Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Calni_0684 Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D Calni_0496 hybrid cluster protein K05601 hcp; hydroxylamine reductase [EC:1.7.99.1]
D Calni_0731 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Calni_1585 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Calni_0171 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Calni_1858 Carbonate dehydratase K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:cni00920]
D Calni_1090 Flavocytochrome c sulphide dehydrogenase flavin-binding protein K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3]
D Calni_0185 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D Calni_0617 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Calni_0436 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Calni_1398 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Calni_0912 hypothetical protein K21310 mddA; methanethiol S-methyltransferase [EC:2.1.1.334]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:cni00061]
D Calni_1067 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D Calni_0234 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D Calni_0235 biotin carboxylase; acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Calni_0565 biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D Calni_0050 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D Calni_1226 acyl carrier protein K02078 acpP; acyl carrier protein
D Calni_1224 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Calni_1223 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Calni_1227 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Calni_0200 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Calni_1225 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Calni_0303 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Calni_0997 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Calni_0349 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0555 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_1825 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0716 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:cni00071]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Calni_0351 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Calni_0350 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Calni_0343 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Calni_0349 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0555 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_1825 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0716 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:cni00561]
D Calni_0420 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Calni_1222 phosphate:acyl-(acyl carrier protein) acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Calni_1661 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Calni_1101 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Calni_0964 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
C 00564 Glycerophospholipid metabolism [PATH:cni00564]
D Calni_0959 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D Calni_1661 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Calni_1101 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D Calni_0964 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D Calni_2000 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D Calni_0491 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Calni_1620 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Calni_0492 phosphatidylserine decarboxylase related protein K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
D Calni_1662 CDP-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]
D Calni_1938 phosphatidylglycerophosphatase A K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27]
D Calni_1319 phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-]
D Calni_1112 CDP-alcohol phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
C 00592 alpha-Linolenic acid metabolism [PATH:cni00592]
D Calni_0351 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:cni00230]
D Calni_1929 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Calni_1989 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Calni_1381 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Calni_0239 ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D Calni_1055 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Calni_1079 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D Calni_0660 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Calni_1056 phosphoribosylformylglycinamidine synthase subunit II K23269 purL; phosphoribosylformylglycinamidine synthase subunit PurL [EC:6.3.5.3]
D Calni_1058 phosphoribosylformylglycinamidine synthase, purS K23264 purS; phosphoribosylformylglycinamidine synthase subunit PurS [EC:6.3.5.3]
D Calni_1057 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Calni_0659 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D Calni_1791 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D Calni_0601 phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D Calni_0061 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Calni_1080 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Calni_0633 5'-nucleotidase; exopolyphosphatase; 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Calni_1099 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Calni_1446 hypoxanthine phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8]
D Calni_0135 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Calni_1237 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Calni_0582 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D Calni_1287 phosphoribosyltransferase K03816 xpt; xanthine phosphoribosyltransferase [EC:2.4.2.22]
D Calni_0134 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Calni_1016 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D Calni_0614 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Calni_0664 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Calni_0536 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Calni_1830 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Calni_0535 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D Calni_1836 adenylate/guanylate cyclase with Chase sensor K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D Calni_0375 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Calni_0335 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Calni_1487 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Calni_1931 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Calni_0421 histidine triad (HIT) protein K19710 E2.7.7.53; ATP adenylyltransferase [EC:2.7.7.53]
C 00240 Pyrimidine metabolism [PATH:cni00240]
D Calni_1006 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Calni_0047 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Calni_0902 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Calni_0901 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D Calni_1008 dihydroorotate oxidase B, catalytic subunit K17828 pyrDI; dihydroorotate dehydrogenase (NAD+) catalytic subunit [EC:1.3.1.14]
D Calni_1007 dihydroorotate oxidase B, electron transfer subunit K02823 pyrDII; dihydroorotate dehydrogenase electron transfer subunit
D Calni_0761 dihydroorotate oxidase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1]
D Calni_0989 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D Calni_0988 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D Calni_2003 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D Calni_1237 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Calni_1931 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Calni_0556 maf protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D Calni_1437 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D Calni_0093 cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D Calni_0633 5'-nucleotidase; exopolyphosphatase; 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Calni_1651 uracil phosphoribosyltransferase K00761 upp; uracil phosphoribosyltransferase [EC:2.4.2.9]
D Calni_0903 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Calni_0335 metallophosphoesterase K09769 ymdB; 2',3'-cyclic-nucleotide 2'-phosphodiesterase [EC:3.1.4.16]
D Calni_0614 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D Calni_0591 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Calni_0918 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9]
D Calni_0915 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Calni_0294 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:cni00250]
D Calni_1125 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Calni_2049 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Calni_0743 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Calni_0255 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Calni_0375 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D Calni_0061 adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D Calni_0902 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D Calni_0171 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Calni_0731 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Calni_0885 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Calni_1585 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Calni_1006 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D Calni_0047 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D Calni_1057 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Calni_0410 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Calni_1055 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:cni00260]
D Calni_0869 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Calni_0996 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Calni_0867 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Calni_1238 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D Calni_0592 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Calni_0420 glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D Calni_2053 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Calni_0868 phosphoglycerate mutase K15635 apgM; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D Calni_1129 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_0491 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D Calni_0001 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Calni_0983 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Calni_0982 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Calni_2017 tryptophan synthase, beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
C 00270 Cysteine and methionine metabolism [PATH:cni00270]
D Calni_0617 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D Calni_0436 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47]
D Calni_0247 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Calni_0876 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D Calni_1099 protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4]
D Calni_0782 amidohydrolase K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28]
D Calni_0130 purine or other phosphorylase family 1 K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44]
D Calni_1934 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23]
D Calni_0569 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Calni_0869 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Calni_0996 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Calni_0867 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Calni_1398 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46]
D Calni_0437 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D Calni_0961 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Calni_0463 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D Calni_1129 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
C 00280 Valine, leucine and isoleucine degradation [PATH:cni00280]
D Calni_0961 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_0343 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
D Calni_0351 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Calni_0564 propionyl-CoA carboxylase carboxyltransferase subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15]
D Calni_1046 methylmalonyl-CoA epimerase K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D Calni_0567 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Calni_0288 3-hydroxyisobutyrate dehydrogenase K00020 HIBADH; 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
D Calni_1355 3-oxoacid CoA-transferase, B subunit K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:cni00290]
D Calni_0001 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D Calni_2034 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D Calni_2035 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D Calni_1247 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D Calni_0832 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Calni_0831 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Calni_0830 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Calni_0758 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Calni_0961 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Calni_2049 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Calni_0870 (R)-citramalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
D Calni_0490 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:cni00300]
D Calni_0867 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D Calni_0869 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Calni_0996 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Calni_1811 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Calni_1812 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D Calni_0741 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Calni_1810 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Calni_0074 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Calni_0514 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D Calni_1730 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Calni_1729 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:cni00310]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00220 Arginine biosynthesis [PATH:cni00220]
D Calni_0742 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3]
D Calni_0743 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Calni_0255 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Calni_1057 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Calni_1585 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Calni_0731 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Calni_2049 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Calni_0905 N-acetylglutamate synthase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1]
D Calni_1579 arginine biosynthesis bifunctional protein ArgJ K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]
D Calni_0262 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D Calni_1578 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D Calni_0741 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
C 00330 Arginine and proline metabolism [PATH:cni00330]
D Calni_1088 arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D Calni_1452 agmatine deiminase K10536 aguA; agmatine deiminase [EC:3.5.3.12]
D Calni_1451 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K12251 aguB; N-carbamoylputrescine amidase [EC:3.5.1.53]
D Calni_0887 carboxynorspermidine decarboxylase K13747 nspC; carboxynorspermidine decarboxylase [EC:4.1.1.96]
D Calni_1188 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D Calni_0884 Proline dehydrogenase K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D Calni_0885 delta-1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D Calni_1260 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Calni_1259 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00340 Histidine metabolism [PATH:cni00340]
D Calni_0299 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D Calni_0374 Histidine--tRNA ligase K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit
D Calni_0265 phosphoribosyl-ATP diphosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
D Calni_1939 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D Calni_1940 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D Calni_0266 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D Calni_1941 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]
D Calni_0089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Calni_1277 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
C 00350 Tyrosine metabolism
D Calni_0089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00360 Phenylalanine metabolism [PATH:cni00360]
D Calni_0889 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Calni_0897 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30]
D Calni_0089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00380 Tryptophan metabolism [PATH:cni00380]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:cni00400]
D Calni_1859 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Calni_0715 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Calni_1357 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Calni_0090 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Calni_0228 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D Calni_0231 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D Calni_0227 Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D Calni_0092 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D Calni_1343 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D Calni_0977 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Calni_0978 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Calni_0979 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D Calni_0981 N-(5'phosphoribosyl)anthranilate isomerase (PRAI) K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D Calni_0980 Indole-3-glycerol-phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D Calni_0983 tryptophan synthase, alpha subunit K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D Calni_0982 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Calni_2017 tryptophan synthase, beta chain K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D Calni_0088 chorismate mutase; prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51]
D Calni_0091 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Calni_0089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:cni00410]
D Calni_1116 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D Calni_1117 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Calni_0343 acyl-CoA dehydrogenase domain-containing protein K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1]
C 00430 Taurine and hypotaurine metabolism [PATH:cni00430]
D Calni_0731 NAD-glutamate dehydrogenase K15371 GDH2; glutamate dehydrogenase [EC:1.4.1.2]
D Calni_0766 phosphotransacetylase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8]
D Calni_0765 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1]
C 00440 Phosphonate and phosphinate metabolism
C 00450 Selenocompound metabolism [PATH:cni00450]
D Calni_0247 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Calni_1308 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D Calni_0805 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Calni_1103 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Calni_0921 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism
D Calni_0592 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:cni00470]
D Calni_0907 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Calni_1723 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Calni_1057 phosphoribosylformylglycinamidine synthase subunit I K23265 purQ; phosphoribosylformylglycinamidine synthase subunit PurQ / glutaminase [EC:6.3.5.3 3.5.1.2]
D Calni_1200 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Calni_1727 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Calni_1810 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D Calni_0514 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
C 00480 Glutathione metabolism [PATH:cni00480]
D Calni_0383 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D Calni_1059 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Calni_0456 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Calni_0462 isocitrate dehydrogenase, NADP-dependent K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation
C 00540 Lipopolysaccharide biosynthesis [PATH:cni00540]
D Calni_0304 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Calni_0105 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Calni_0302 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Calni_0306 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Calni_1459 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Calni_1053 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Calni_1435 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Calni_1436 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Calni_1434 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Calni_1438 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Calni_1073 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Calni_0508 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Calni_1741 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Calni_1316 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Calni_0507 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
D Calni_1740 D-beta-D-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Calni_1075 glycosyl transferase family 9 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Calni_1076 glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Calni_0152 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D Calni_1077 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:cni00541]
D Calni_1635 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]
D Calni_0166 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D Calni_2007 nucleotide sugar dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D Calni_1183 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Calni_1180 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Calni_0053 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Calni_1162 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Calni_1182 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Calni_1181 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D Calni_1164 glucose-1-phosphate cytidylyltransferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33]
D Calni_1163 CDP-glucose 4,6-dehydratase K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45]
D Calni_1184 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D Calni_1168 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Calni_1961 GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D Calni_1166 GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Calni_1962 NAD-dependent epimerase/dehydratase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D Calni_1964 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Calni_1798 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Calni_0409 glucosamine-1-phosphate N-acetyltransferase; UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157]
D Calni_1178 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Calni_0709 UDP-N-acetylglucosamine 4,6-dehydratase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D Calni_0722 pseudaminic acid biosynthesis N-acetyl transferase K15896 pseH; UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase [EC:2.3.1.202]
D Calni_0714 pseudaminic acid biosynthesis-associated protein PseG K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57]
D Calni_0723 N-acetylneuraminate synthase K15898 pseI; pseudaminic acid synthase [EC:2.5.1.97]
D Calni_0837 nucleotide sugar dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D Calni_1806 oxidoreductase domain protein K13016 wbpB; UDP-N-acetyl-2-amino-2-deoxyglucuronate dehydrogenase [EC:1.1.1.335]
D Calni_0511 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Calni_1805 transferase hexapeptide repeat containing protein K13018 wbpD; UDP-2-acetamido-3-amino-2,3-dideoxy-glucuronate N-acetyltransferase [EC:2.3.1.201]
D Calni_1804 UDP-N-acetylglucosamine 2-epimerase K13019 wbpI; UDP-GlcNAc3NAcA epimerase [EC:5.1.3.23]
C 00550 Peptidoglycan biosynthesis [PATH:cni00550]
D Calni_0298 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Calni_0129 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Calni_1724 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Calni_1727 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Calni_1730 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Calni_1723 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Calni_1729 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Calni_2001 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Calni_1410 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Calni_1728 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Calni_1725 Undecaprenyldiphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Calni_1716 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Calni_0668 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Calni_0581 penicillin-binding protein transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Calni_0365 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Calni_1731 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:cni00552]
D Calni_1410 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:cni00543]
D Calni_1976 putative colanic acid biosynthesis acetyltransferase WcaF K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D Calni_0617 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:cni00730]
D Calni_0757 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17]
D Calni_0108 phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7]
D Calni_0070 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
D Calni_1678 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Calni_0619 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Calni_0488 tyrosine lyase ThiH K03150 thiH; 2-iminoacetate synthase [EC:4.1.99.19]
D Calni_0275 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Calni_0489 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10]
D Calni_0756 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D Calni_0755 thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D Calni_1618 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Calni_1487 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:cni00740]
D Calni_1658 GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Calni_1660 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Calni_1657 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D Calni_1659 riboflavin synthase, alpha subunit K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D Calni_0475 riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
D Calni_1929 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-]
D Calni_1759 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00750 Vitamin B6 metabolism [PATH:cni00750]
D Calni_1440 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D Calni_1238 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:cni00760]
D Calni_1125 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16]
D Calni_0336 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72]
D Calni_1310 nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D Calni_1691 nicotinate phosphoribosyltransferase K00763 pncB; nicotinate phosphoribosyltransferase [EC:6.3.4.21]
D Calni_0633 5'-nucleotidase; exopolyphosphatase; 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D Calni_1258 nicotinate (nicotinamide) nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D Calni_1931 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Calni_0136 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D Calni_1690 Nicotinamidase K08281 pncA; nicotinamidase/pyrazinamidase [EC:3.5.1.19 3.5.1.-]
D Calni_0277 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
C 00770 Pantothenate and CoA biosynthesis [PATH:cni00770]
D Calni_0832 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D Calni_0831 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D Calni_0830 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D Calni_0758 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D Calni_1118 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D Calni_0607 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Calni_0201 2-dehydropantoate 2-reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169]
D Calni_1117 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D Calni_1675 pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D Calni_1014 Phosphopantothenoylcysteine decarboxylase; Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D Calni_1931 MazG family protein K04765 mazG; nucleoside triphosphate diphosphatase [EC:3.6.1.9]
D Calni_0650 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D Calni_0043 dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D Calni_1439 holo-acyl-carrier-protein synthase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7]
D Calni_0961 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Calni_1116 L-aspartate 1-decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
C 00780 Biotin metabolism [PATH:cni00780]
D Calni_1049 biotin biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197]
D Calni_1227 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Calni_0200 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Calni_1225 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Calni_0303 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Calni_0997 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Calni_1050 protein of unknown function DUF452 K09789 bioG; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85]
D Calni_1051 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Calni_1052 adenosylmethionine-8-amino-7-oxononanoateamino transferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Calni_1371 dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D Calni_1516 biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D Calni_0118 radical SAM domain protein K01012 bioB; biotin synthase [EC:2.8.1.6]
D Calni_1674 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:cni00785]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
C 00790 Folate biosynthesis [PATH:cni00790]
D Calni_0405 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16]
D Calni_1618 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Calni_0874 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3]
D Calni_1444 dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D Calni_0051 FolC bifunctional protein K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D Calni_1658 GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D Calni_1927 Chorismate binding protein K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D Calni_1926 hypothetical protein K02619 pabC; 4-amino-4-deoxychorismate lyase [EC:4.1.3.38]
D Calni_1563 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Calni_1562 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Calni_1217 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Calni_0784 beta-lactamase domain protein K06897 K06897; 7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase [EC:2.5.1.105]
D Calni_1795 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Calni_0138 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Calni_0917 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Calni_0704 molybdenum cofactor synthesis domain protein K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1]
D Calni_0513 molybdopterin-guanine dinucleotide biosynthesis protein A K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77]
C 00670 One carbon pool by folate [PATH:cni00670]
D Calni_0007 5; methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D Calni_0592 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D Calni_0660 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D Calni_1080 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Calni_0073 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Calni_0739 formyl transferase domain protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Calni_0247 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D Calni_0294 thymidylate synthase (FAD) K03465 thyX; thymidylate synthase (FAD) [EC:2.1.1.148]
D Calni_1364 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D Calni_0333 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:cni00860]
D Calni_1982 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D Calni_1475 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Calni_1542 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Calni_1908 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Calni_0182 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Calni_1981 hydroxymethylbilane synthase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D Calni_1980 Uroporphyrinogen III synthase HEM4 K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D Calni_1756 uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D Calni_0746 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
D Calni_1757 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D Calni_2115 uroporphyrin-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107]
D Calni_2122 siroheme synthase K24866 sirC; precorrin-2 dehydrogenase [EC:1.3.1.76]
D Calni_1044 Radical SAM domain protein K22227 ahbD; AdoMet-dependent heme synthase [EC:1.3.98.6]
D Calni_2111 Sirohydrochlorin cobaltochelatase K02190 cbiK; sirohydrochlorin cobaltochelatase [EC:4.99.1.3]
D Calni_2116 precorrin-2 C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151]
D Calni_2127 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272]
D Calni_2125 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271]
D Calni_2126 cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12]
D Calni_2118 precorrin-6x reductase K05895 cobK-cbiJ; precorrin-6A/cobalt-precorrin-6A reductase [EC:1.3.1.54 1.3.1.106]
D Calni_2123 cobalamin biosynthesis protein CbiD K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195]
D Calni_2124 precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit K03399 cbiE; cobalt-precorrin-7 (C5)-methyltransferase [EC:2.1.1.289]
D Calni_2117 Precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60]
D Calni_2110 cobyrinic acid a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11]
D Calni_1215 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Calni_2120 cobyric acid synthase CobQ K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10]
D Calni_2121 cobalamin biosynthesis protein CobD K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10]
D Calni_1885 Adenosylcobinamide-phosphate guanylyl transferase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62]
D Calni_1888 cobalamin 5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26]
D Calni_1884 Xylose isomerase domain-containing protein TIM barrel K25496 cbiR; adenosylcobalamin phosphodiesterase
D Calni_1887 nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21]
D Calni_2119 aminotransferase class I and II K04720 cobD; threonine-phosphate decarboxylase [EC:4.1.1.81]
D Calni_2068 Ferritin Dps family protein K03594 bfr; bacterioferritin [EC:1.16.3.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:cni00130]
D Calni_1758 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
D Calni_1773 3-octaprenyl-4hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98]
D Calni_1759 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Calni_1772 ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D Calni_1185 protein of unknown function DUF178 K11782 mqnA; chorismate dehydratase [EC:4.2.1.151]
D Calni_1638 Radical SAM domain protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120]
D Calni_1363 hypothetical protein K11783 mqnB; futalosine hydrolase [EC:3.2.2.26]
D Calni_2061 Radical SAM domain protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1]
D Calni_0911 hypothetical protein K11785 mqnD; 5,8-dihydroxy-2-naphthoate synthase [EC:4.1.99.29]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:cni00900]
D Calni_0275 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D Calni_1999 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]
D Calni_1095 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60]
D Calni_0238 4-diphosphocytidyl-2C-methyl-D-erythritolkinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148]
D Calni_0748 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12]
D Calni_1131 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]
D Calni_0094 hydroxymethylbutenyl pyrophosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Calni_1759 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
D Calni_0274 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Calni_0561 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Calni_2001 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
C 00907 Pinene, camphor and geraniol degradation [PATH:cni00907]
D Calni_0351 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D Calni_0419 Transketolase domain-containing protein K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:cni00523]
D Calni_1183 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Calni_1180 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Calni_0053 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Calni_1162 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Calni_1182 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Calni_1181 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
C 01055 Biosynthesis of vancomycin group antibiotics
D Calni_1180 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Calni_0053 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
C 00332 Carbapenem biosynthesis [PATH:cni00332]
D Calni_1260 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11]
D Calni_1259 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41]
C 00261 Monobactam biosynthesis [PATH:cni00261]
D Calni_0869 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4]
D Calni_0996 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D Calni_1811 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D Calni_1812 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:cni00521]
D Calni_1083 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
D Calni_1989 phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D Calni_1381 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2]
D Calni_1270 inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25]
D Calni_1183 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Calni_1180 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Calni_0053 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Calni_1162 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Calni_1182 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D Calni_1181 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
D Calni_1083 ROK family protein K25026 glk; glucokinase [EC:2.7.1.2]
C 00525 Acarbose and validamycin biosynthesis [PATH:cni00525]
D Calni_1183 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D Calni_1180 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D Calni_0053 NAD-dependent epimerase/dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:cni00401]
D Calni_0091 Prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D Calni_0089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D Calni_0977 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Calni_0978 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D Calni_1224 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Calni_0200 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Calni_1225 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Calni_0997 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D Calni_1226 acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D Calni_0876 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:cni00362]
D Calni_0351 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D Calni_0925 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
D Calni_0350 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:cni00627]
D Calni_0286 acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7]
D Calni_1759 3-octaprenyl-4-hydroxybenzoate carboxy-lyase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129]
C 00364 Fluorobenzoate degradation
C 00625 Chloroalkane and chloroalkene degradation
D Calni_0686 Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1]
D Calni_0684 Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH
D Calni_0685 Mo-nitrogenase MoFe protein subunit NifD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1]
C 00361 Chlorocyclohexane and chlorobenzene degradation
C 00623 Toluene degradation
C 00622 Xylene degradation
D Calni_0925 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00633 Nitrotoluene degradation
D Calni_0097 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Calni_0096 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
C 00642 Ethylbenzene degradation
D Calni_0351 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
D Calni_0925 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6]
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:cni03020]
D Calni_1528 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Calni_1527 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Calni_1480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Calni_1015 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:cni03010]
D Calni_0095 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Calni_1415 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Calni_1501 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Calni_1481 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Calni_1490 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Calni_0515 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Calni_1511 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Calni_1493 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Calni_2015 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Calni_1508 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Calni_1482 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Calni_1512 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Calni_1483 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Calni_1494 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Calni_1296 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Calni_2009 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Calni_1498 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Calni_0517 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Calni_1503 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Calni_1710 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Calni_1038 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Calni_1531 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Calni_1504 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Calni_1507 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Calni_1506 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Calni_1495 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Calni_1492 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Calni_1529 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Calni_0103 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Calni_1530 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Calni_1532 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Calni_2014 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Calni_1497 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Calni_1489 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Calni_1500 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Calni_1479 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Calni_1491 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Calni_2013 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Calni_1321 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Calni_2038 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Calni_1502 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Calni_1505 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Calni_1496 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Calni_2039 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Calni_0700 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Calni_1499 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Calni_0293 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Calni_1221 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Calni_1535 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Calni_1026 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Calni_1322 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Calni_1484 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Calni_R0034 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Calni_R0049 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Calni_R0046 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Calni_R0031 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Calni_R0030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Calni_R0045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:cni00970]
D Calni_R0039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Calni_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Calni_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Calni_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Calni_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Calni_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Calni_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Calni_R0019 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Calni_R0010 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Calni_R0027 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Calni_R0029 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Calni_R0008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Calni_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Calni_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Calni_R0015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Calni_R0013 tRNA-His K14226 tRNA-His; tRNA His
D Calni_R0033 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Calni_R0048 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Calni_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0007 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Calni_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met
D Calni_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met
D Calni_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D Calni_R0028 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Calni_R0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Calni_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Calni_R0005 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Calni_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Calni_R0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Calni_R0016 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Calni_R0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Calni_R0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Calni_R0037 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Calni_R0041 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Calni_R0050 tRNA-Val K14237 tRNA-Val; tRNA Val
D Calni_R0009 tRNA-Val K14237 tRNA-Val; tRNA Val
D Calni_R0051 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D Calni_2047 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Calni_0083 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Calni_1047 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Calni_0082 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Calni_0248 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Calni_0827 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Calni_0871 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Calni_0744 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Calni_2059 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Calni_1324 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Calni_0478 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Calni_1103 L-seryl-tRNA selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
D Calni_0407 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Calni_0921 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Calni_0073 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Calni_0739 formyl transferase domain protein K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D Calni_1311 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Calni_0469 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Calni_1082 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Calni_0360 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Calni_1453 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Calni_0984 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Calni_0872 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Calni_0328 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Calni_0329 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Calni_0309 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Calni_1567 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:cni03060]
D Calni_1488 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Calni_1534 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Calni_0863 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Calni_1242 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Calni_1243 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Calni_1241 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Calni_1028 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Calni_1943 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Calni_2008 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Calni_R0003 RNA component of signal recognition particle K01983 ffs; SRP RNA
D Calni_1086 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Calni_1793 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA
D Calni_0392 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Calni_1794 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
D Calni_2005 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Calni_1081 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:cni04122]
D Calni_1678 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Calni_0619 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Calni_1891 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Calni_1795 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22]
D Calni_0138 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17]
D Calni_0917 molybdenum cofactor synthesis domain protein K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75]
D Calni_0069 thiamine biosynthesis protein ThiS K03154 thiS; sulfur carrier protein
D Calni_0070 thiamine biosynthesis protein ThiF K03148 thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]
C 03050 Proteasome
C 03018 RNA degradation [PATH:cni03018]
D Calni_1122 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Calni_1295 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Calni_0671 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Calni_1003 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Calni_0292 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Calni_0334 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Calni_1409 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Calni_1216 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Calni_0252 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Calni_2032 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Calni_1670 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Calni_1538 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Calni_0534 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Calni_1752 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:cni03030]
D Calni_0770 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_0079 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_1210 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_0109 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Calni_1372 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Calni_0471 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Calni_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Calni_0104 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Calni_1369 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Calni_0516 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Calni_1339 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Calni_1995 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Calni_1779 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:cni03410]
D Calni_1774 endonuclease III; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Calni_0621 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Calni_1013 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Calni_1384 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Calni_0665 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Calni_0058 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Calni_1779 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:cni03420]
D Calni_1739 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Calni_2063 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Calni_0667 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Calni_1412 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Calni_1087 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Calni_1779 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:cni03430]
D Calni_0424 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Calni_1212 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Calni_1068 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Calni_1087 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Calni_1665 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Calni_0273 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Calni_0665 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Calni_0058 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Calni_0516 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Calni_0109 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Calni_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Calni_1372 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Calni_0471 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Calni_0770 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_0079 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_1210 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_1779 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:cni03440]
D Calni_0665 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Calni_0058 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Calni_0516 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Calni_0004 SMC domain protein K03629 recF; DNA replication and repair protein RecF
D Calni_1374 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D Calni_0100 RecA protein K03553 recA; recombination protein RecA
D Calni_1232 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Calni_0999 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Calni_1233 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Calni_0994 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Calni_0145 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Calni_0577 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Calni_0109 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Calni_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Calni_1372 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Calni_0471 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Calni_0770 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_0079 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_1210 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_0753 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:cni02010]
D Calni_1526 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Calni_0690 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Calni_1522 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Calni_0689 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Calni_1521 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Calni_0688 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Calni_0910 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Calni_1582 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Calni_1580 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Calni_0908 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Calni_0909 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Calni_1283 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D Calni_1285 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Calni_1286 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D Calni_1284 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Calni_1576 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D Calni_1575 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein
D Calni_1574 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Calni_1573 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Calni_1822 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_0891 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_0892 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_0698 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_1824 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Calni_0893 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Calni_0697 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Calni_0696 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Calni_0894 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Calni_1823 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Calni_1826 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Calni_0695 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Calni_0895 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Calni_0694 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Calni_0896 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Calni_1821 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Calni_0777 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Calni_0779 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Calni_0778 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Calni_0441 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Calni_0440 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D Calni_0439 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Calni_0133 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Calni_0132 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Calni_1684 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Calni_1685 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Calni_1686 ABC transporter related protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Calni_0843 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Calni_0844 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Calni_1431 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Calni_0971 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Calni_0970 Sigma 54 interacting domain protein K09812 ftsE; cell division transport system ATP-binding protein
D Calni_0167 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
C 02060 Phosphotransferase system (PTS) [PATH:cni02060]
D Calni_1420 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Calni_1421 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Calni_1425 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Calni_1424 PTS system sorbose subfamily IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Calni_1423 hypothetical protein K02795 manY; mannose PTS system EIIC component
D Calni_1422 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D Calni_1428 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
C 03070 Bacterial secretion system [PATH:cni03070]
D Calni_1326 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1700 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1242 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Calni_1243 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Calni_1534 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Calni_0863 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Calni_1488 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Calni_1241 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Calni_1028 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Calni_1943 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Calni_1086 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Calni_2008 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Calni_1793 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA
D Calni_0392 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Calni_1794 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:cni02020]
D Calni_1571 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Calni_1570 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Calni_0450 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Calni_1618 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Calni_1576 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D Calni_0951 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Calni_0953 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Calni_1327 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Calni_0788 flagellin domain protein K02406 fliC; flagellin
D Calni_0706 flagellin domain protein K02406 fliC; flagellin
D Calni_0930 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Calni_0736 lateral flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Calni_0002 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Calni_2093 Chromosomal replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D Calni_1808 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Calni_1537 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Calni_0732 malic protein domain protein K00027 ME2; malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38]
D Calni_0215 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D Calni_0604 UTP-GlnB uridylyltransferase, GlnD K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59]
D Calni_1584 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D Calni_0669 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Calni_0670 two component, sigma54 specific, transcriptional regulator, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Calni_1585 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Calni_1559 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Calni_1558 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Calni_0675 sigma54 specific transcriptional regulator, Fis family K02584 nifA; Nif-specific regulatory protein
D Calni_1903 signal transduction histidine kinase, nitrogen specific, NtrB K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D Calni_1809 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Calni_1645 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Calni_1663 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D Calni_1430 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Calni_0149 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Calni_0096 hydrogenase (NiFe) small subunit HydA K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6]
D Calni_0097 nickel-dependent hydrogenase large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6]
D Calni_0098 Ni/Fe-hydrogenase, b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit
D Calni_0943 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Calni_0270 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Calni_0099 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0256 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0435 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0500 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0763 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0790 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0993 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Calni_0654 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Calni_0936 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Calni_0934 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Calni_0931 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Calni_0785 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Calni_0655 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Calni_0656 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Calni_0653 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH
D Calni_1707 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D Calni_1703 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D Calni_1706 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Calni_1705 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Calni_0386 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Calni_0379 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Calni_0549 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Calni_0818 Cytochrome-c oxidase K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9]
D Calni_0819 cytochrome c oxidase, cbb3-type, subunit II K00405 ccoO; cytochrome c oxidase cbb3-type subunit II
D Calni_1520 cytochrome c class I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7]
D Calni_1326 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1700 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1178 UDP-N-Acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14]
D Calni_0387 response regulator receiver modulated protein serine/threonine phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:cni02024]
D Calni_1670 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Calni_1538 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Calni_0977 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D Calni_0978 glutamine amidotransferase of anthranilate synthase K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D Calni_1859 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Calni_0715 3-deoxy-7-phosphoheptulonate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]
D Calni_0021 Domain of unknown function DUF1858 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Calni_1822 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_0891 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_0892 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_0698 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_1824 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Calni_0893 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Calni_0697 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Calni_0696 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Calni_0894 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Calni_1823 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Calni_1826 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Calni_0695 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Calni_0895 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Calni_0694 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Calni_0896 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Calni_1821 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Calni_0349 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0555 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_1825 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0716 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0379 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Calni_0549 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Calni_1660 riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D Calni_0573 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Calni_0862 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Calni_0861 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Calni_0860 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Calni_1370 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Calni_1028 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Calni_1534 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Calni_0863 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Calni_1488 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Calni_1241 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Calni_1943 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Calni_1086 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Calni_2008 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Calni_1537 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:cni02030]
D Calni_0099 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0256 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0435 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0500 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0763 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0790 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0936 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Calni_0993 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Calni_0654 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Calni_0934 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Calni_0307 CheC domain protein K03409 cheX; chemotaxis protein CheX
D Calni_0931 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Calni_0785 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Calni_0943 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Calni_0270 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Calni_1786 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Calni_0932 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Calni_0933 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Calni_1334 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Calni_0736 lateral flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Calni_0735 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:cni02040]
D Calni_1788 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Calni_1787 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Calni_1786 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Calni_1785 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D Calni_1784 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Calni_1783 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D Calni_1458 Flagellar hook-length control protein-like, C-terminal domain K02414 fliK; flagellar hook-length control protein FliK
D Calni_1335 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Calni_0807 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Calni_0932 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Calni_0933 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Calni_1334 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Calni_1333 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Calni_1332 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Calni_1331 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Calni_0760 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Calni_0926 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Calni_0759 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Calni_0448 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Calni_1790 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Calni_1789 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Calni_1457 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Calni_1456 fagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D Calni_0446 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Calni_0447 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Calni_1244 fagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D Calni_0223 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Calni_0222 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Calni_0221 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D Calni_0218 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Calni_0788 flagellin domain protein K02406 fliC; flagellin
D Calni_0706 flagellin domain protein K02406 fliC; flagellin
D Calni_1197 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2
D Calni_1196 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Calni_0736 lateral flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Calni_0735 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Calni_1368 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Calni_1137 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Calni_0430 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Calni_1430 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Calni_0930 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D Calni_1122 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:cni04980]
D Calni_1215 ATP/cobalamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D Calni_0568 methylmalonyl-CoA mutase metallochaperone MeaB K07588 MMAA; GTPase [EC:3.6.5.-]
D Calni_0567 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D Calni_0247 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:cni01501]
D Calni_0571 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Calni_0573 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Calni_1326 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1700 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_0668 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Calni_0581 penicillin-binding protein transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Calni_0365 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Calni_1731 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 01502 Vancomycin resistance [PATH:cni01502]
D Calni_1723 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Calni_0907 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Calni_1729 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D Calni_1728 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Calni_1725 Undecaprenyldiphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:cni01503]
D Calni_2064 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Calni_0951 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Calni_0953 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Calni_0571 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Calni_1326 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1700 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_0304 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:cni01000]
C 01001 Protein kinases [BR:cni01001]
D Calni_0067 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Calni_1571 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Calni_1808 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Calni_0669 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Calni_1559 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Calni_1903 signal transduction histidine kinase, nitrogen specific, NtrB K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D Calni_1645 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Calni_0267 response regulator receiver sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Calni_0512 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Calni_1250 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Calni_1288 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Calni_0936 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Calni_0656 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
C 01009 Protein phosphatases and associated proteins [BR:cni01009]
D Calni_0569 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Calni_1216 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Calni_0147 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:cni01002]
D Calni_1081 signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36]
D Calni_0308 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Calni_0554 hydrogenase maturation protease K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-]
D Calni_0134 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D Calni_1360 NLP/P60 protein K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D Calni_1055 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D Calni_0171 ferredoxin-dependent glutamate synthase K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D Calni_0410 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D Calni_0548 intracellular protease, PfpI family K05520 yhbO; deglycase [EC:3.5.1.124]
D Calni_1622 Abortive infection protein K07052 K07052; CAAX protease family protein
D Calni_1827 Oligopeptidase A K01414 prlC; oligopeptidase A [EC:3.4.24.70]
D Calni_1059 peptidase M17 leucyl aminopeptidase domain protein K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1]
D Calni_0456 aminoacyl-histidine dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D Calni_1486 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D Calni_0431 peptidase M24 K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D Calni_0232 peptidase M24 K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D Calni_1367 peptidase M29 aminopeptidase II K19689 ampS; aminopeptidase [EC:3.4.11.-]
D Calni_1445 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Calni_0071 Heat shock protein K03799 htpX; heat shock protein HtpX [EC:3.4.24.-]
D Calni_1998 site-2 protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D Calni_0951 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Calni_0953 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Calni_1041 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D Calni_2022 peptidase S16 family protein K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Calni_1039 ATP-dependent proteinase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Calni_1633 ATP-dependent proteinase K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D Calni_0691 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Calni_2005 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D Calni_0973 carboxyl-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D Calni_0208 signal peptide peptidase SppA, 36K type K04773 sppA; protease IV [EC:3.4.21.-]
D Calni_1736 Rhomboid family protein K07059 K07059; rhomboid family protein
D Calni_1518 HslV component of HslUV peptidase K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2]
D Calni_1780 peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-]
C 01003 Glycosyltransferases [BR:cni01003]
D Calni_0153 Dolichyl-phosphate beta-D-mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D Calni_1969 glycosyl transferase group 1 K13668 pimB; phosphatidyl-myo-inositol dimannoside synthase [EC:2.4.1.346]
D Calni_1709 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21]
D Calni_1716 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Calni_0668 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Calni_0581 penicillin-binding protein transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:cni01005]
D Calni_0304 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineO-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D Calni_1459 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D Calni_0105 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108]
D Calni_0302 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D Calni_0306 protein of unknown function DUF1009 K09949 lpxI; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D Calni_1053 tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D Calni_0508 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D Calni_1073 Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D Calni_1436 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D Calni_1438 3-deoxy-D-manno-octulosonatecytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D Calni_1434 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D Calni_1435 KpsF/GutQ family protein K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D Calni_1316 rfaE bifunctional protein K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167]
D Calni_1740 D-beta-D-heptose 1-phosphate adenylyltransferase K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70]
D Calni_1075 glycosyl transferase family 9 K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23]
D Calni_1076 glycosyl transferase family 9 K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24]
D Calni_1077 O-antigen polymerase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D Calni_0152 glycosyl transferase family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25]
D Calni_1741 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28]
D Calni_0507 histidinol-phosphate phosphatase family protein K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:cni01011]
D Calni_0298 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D Calni_0129 UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D Calni_1724 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D Calni_1727 UDP-N-acetylmuramoylalanine/D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D Calni_1730 UDP-N-acetylmuramyl-tripeptide synthetase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D Calni_1723 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D Calni_0907 alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D Calni_1200 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D Calni_1728 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D Calni_1725 Undecaprenyldiphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D Calni_1410 Bacitracin resistance protein BacA K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D Calni_1205 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Calni_0668 penicillin-binding protein, 1A family K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Calni_0581 penicillin-binding protein transpeptidase K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D Calni_0365 peptidoglycan glycosyltransferase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D Calni_1731 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Calni_1716 monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28]
D Calni_0494 Lytic transglycosylase catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Calni_1025 membrane-bound lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29]
D Calni_1386 Lytic transglycosylase catalytic K08306 mltC; peptidoglycan lytic transglycosylase C [EC:4.2.2.29]
D Calni_0774 Lytic transglycosylase catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D Calni_0046 aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D Calni_0080 rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29]
D Calni_2064 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:cni01004]
D Calni_1224 (Acyl-carrier-protein) S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D Calni_1223 3-oxoacyl-(acyl-carrier-protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D Calni_1227 3-oxoacyl-(acyl-carrier-protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D Calni_0200 short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Calni_1225 3-oxoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D Calni_0303 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D Calni_0997 Enoyl-(acyl-carrier-protein) reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D Calni_0865 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0290 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D Calni_0349 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0555 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_1825 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0716 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0289 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-]
D Calni_1222 phosphate:acyl-(acyl carrier protein) acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274]
D Calni_1661 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275]
D Calni_1101 phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins
C 01006 Prenyltransferases [BR:cni01006]
D Calni_0274 farnesyl-diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D Calni_0561 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D Calni_2001 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D Calni_1069 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Calni_1758 4-hydroxybenzoate polyprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39]
C 01007 Amino acid related enzymes [BR:cni01007]
D Calni_0248 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Calni_2047 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Calni_0309 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Calni_1567 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Calni_0407 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Calni_1453 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Calni_0921 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Calni_1082 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Calni_1311 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Calni_0469 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Calni_0360 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Calni_0871 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Calni_0872 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Calni_0744 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Calni_2059 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Calni_0478 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Calni_0984 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Calni_1324 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Calni_0827 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Calni_0328 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Calni_0329 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Calni_2049 aminotransferase class I and II K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2]
D Calni_0074 LL-diaminopimelate aminotransferase apoenzyme K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D Calni_0089 histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D Calni_1051 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D Calni_0741 acetylornithine and succinylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D Calni_1052 adenosylmethionine-8-amino-7-oxononanoateamino transferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D Calni_1475 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Calni_1542 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Calni_1908 aminotransferase class-III K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D Calni_0961 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D Calni_0511 DegT/DnrJ/EryC1/StrS aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D Calni_1964 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
D Calni_1798 DegT/DnrJ/EryC1/StrS aminotransferase K13010 per; perosamine synthetase [EC:2.6.1.102]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:cni00194]
D Calni_1586 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D Calni_1587 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D Calni_1588 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D Calni_1589 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D Calni_1590 ATP synthase F1, delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D Calni_1591 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Calni_1592 H+transporting two-sector ATPase B/B' subunit K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D Calni_1471 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D Calni_1472 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Calni_1474 hypothetical protein K02116 atpI; ATP synthase protein I
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:cni03000]
D Calni_1696 transcriptional regulator, LysR family K21900 cysL; LysR family transcriptional regulator, transcriptional activator of the cysJI operon
D Calni_1712 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D Calni_0338 transcriptional regulator, TetR family K13770 ysiA; TetR/AcrR family transcriptional regulator, fatty acid metabolism regulator protein
D Calni_0622 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Calni_1135 transcriptional regulator, MerR family K13640 hspR; MerR family transcriptional regulator, heat shock protein HspR
D Calni_0780 hypothetical protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D Calni_0368 ferric uptake regulator, Fur family K09825 perR; Fur family transcriptional regulator, peroxide stress response regulator
D Calni_1711 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Calni_1089 transcriptional regulator, IclR family K19333 kdgR; IclR family transcriptional regulator, KDG regulon repressor
D Calni_0379 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Calni_0549 putative transcriptional regulator, Crp/Fnr family K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D Calni_0438 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Calni_0618 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor
D Calni_0613 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Calni_0817 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
D Calni_0087 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Calni_0174 regulatory protein ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D Calni_1190 iron (metal) dependent repressor, DtxR family K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D Calni_1674 biotin/acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D Calni_0675 sigma54 specific transcriptional regulator, Fis family K02584 nifA; Nif-specific regulatory protein
D Calni_1515 putative transcriptional regulator, ModE family K02019 modE; molybdate transport system regulatory protein
D Calni_1305 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Calni_2091 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Calni_0452 NusG antitermination factor K05785 rfaH; transcriptional antiterminator RfaH
D Calni_0250 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor
D Calni_0204 amino acid-binding ACT domain protein K03567 gcvR; glycine cleavage system transcriptional repressor
D Calni_0903 Uracil phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D Calni_2052 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Calni_1734 MraZ protein K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:cni03021]
D Calni_1480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Calni_1528 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Calni_1527 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Calni_1015 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Calni_1368 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor
D Calni_1137 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Calni_0430 RNA polymerase, sigma 70 subunit, RpoD subfamily K03086 rpoD; RNA polymerase primary sigma factor
D Calni_1430 RNA polymerase, sigma 54 subunit, RpoN K03092 rpoN; RNA polymerase sigma-54 factor
D Calni_0930 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Calni_1301 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Calni_1656 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Calni_1533 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Calni_0940 putative PAS/PAC sensor protein K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Calni_1771 protein serine/threonine phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3]
D Calni_0188 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Calni_0941 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Calni_0269 anti-sigma-factor antagonist K04749 rsbV; anti-sigma B factor antagonist
D Calni_0067 putative anti-sigma regulatory factor, serine/threonine protein kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1]
D Calni_1019 positive regulator of sigma E, RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC
D Calni_2052 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Calni_1664 transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D Calni_0292 transcription termination factor Rho K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:cni03019]
D Calni_1377 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Calni_1228 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Calni_1409 beta-lactamase domain protein K12574 rnj; ribonuclease J [EC:3.1.-.-]
D Calni_0334 metal dependent phosphohydrolase K18682 rny; ribonucrease Y [EC:3.1.-.-]
D Calni_0671 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Calni_1653 metal dependent phosphohydrolase K03698 cbf; 3'-5' exoribonuclease [EC:3.1.-.-]
D Calni_1003 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Calni_1122 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Calni_1295 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D Calni_0292 transcription termination factor Rho K03628 rho; transcription termination factor Rho
D Calni_1216 6-phosphofructokinase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D Calni_0252 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Calni_2032 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Calni_1670 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Calni_1538 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Calni_0534 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D Calni_1752 polynucleotide adenylyltransferase/metal dependent phosphohydrolase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
D Calni_0215 carbon storage regulator, CsrA K03563 csrA; carbon storage regulator
D Calni_1426 hypothetical protein K06958 rapZ; RNase adapter protein RapZ
C 03041 Spliceosome
C 03011 Ribosome [BR:cni03011]
D Calni_0095 RNA binding S1 domain protein K02945 RP-S1; small subunit ribosomal protein S1
D Calni_1415 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2
D Calni_1501 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3
D Calni_1481 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4
D Calni_1490 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5
D Calni_0515 ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D Calni_1511 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7
D Calni_1493 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8
D Calni_2015 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9
D Calni_1508 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10
D Calni_1482 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11
D Calni_1512 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12
D Calni_1483 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13
D Calni_1494 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14
D Calni_1296 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15
D Calni_2009 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16
D Calni_1498 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17
D Calni_0517 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18
D Calni_1503 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19
D Calni_1710 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20
D Calni_1038 ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D Calni_1531 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1
D Calni_1504 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2
D Calni_1507 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3
D Calni_1506 ribosomal protein L4/L1e K02926 RP-L4; large subunit ribosomal protein L4
D Calni_1495 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5
D Calni_1492 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6
D Calni_0103 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9
D Calni_1530 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10
D Calni_1532 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11
D Calni_1529 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12
D Calni_2014 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13
D Calni_1497 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14
D Calni_1489 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15
D Calni_1500 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16
D Calni_1479 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17
D Calni_1491 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18
D Calni_2013 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19
D Calni_1321 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20
D Calni_2038 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21
D Calni_1502 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22
D Calni_1505 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23
D Calni_1496 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24
D Calni_2039 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27
D Calni_0700 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28
D Calni_1499 ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D Calni_0293 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31
D Calni_1221 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32
D Calni_1535 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33
D Calni_1026 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34
D Calni_1322 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35
D Calni_1484 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36
D Calni_R0030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Calni_R0045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Calni_R0034 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Calni_R0049 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Calni_R0046 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Calni_R0031 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:cni03009]
D Calni_1228 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Calni_0962 GTP-binding protein Era K03595 era; GTPase
D Calni_2040 GTP-binding protein Obg/CgtA K03979 obgE; GTPase [EC:3.6.5.-]
D Calni_2052 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor
D Calni_1301 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA
D Calni_1656 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB
D Calni_1533 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG
D Calni_0771 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D Calni_1993 Fmu (Sun) domain protein K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D Calni_1230 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D Calni_1254 protein of unknown function DUF558 K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D Calni_1279 Fmu (Sun) domain protein K11392 rsmF; 16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
D Calni_0010 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Calni_1733 S-adenosyl-methyltransferase MraW K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D Calni_0479 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Calni_1307 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D Calni_0276 hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]
D Calni_0015 RNA methyltransferase, TrmH family, group 3 K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D Calni_1378 23S rRNA Um-2552 2'-O-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
D Calni_2051 protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D Calni_0985 hypothetical protein K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D Calni_0271 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D Calni_0948 deoxyribonuclease/rho motif-related TRAM K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D Calni_0311 pseudouridine synthase, RluA family K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Calni_0640 pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D Calni_0878 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
D Calni_2011 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
D Calni_0476 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D Calni_1255 ribosomal L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D Calni_1377 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-]
D Calni_1003 DEAD/DEAH box helicase domain protein K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D Calni_2048 ribosome-associated GTPase EngA K03977 engA; GTPase
D Calni_0703 GTP-binding protein HflX K03665 hflX; GTPase
D Calni_1792 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Calni_0664 (p)ppGpp synthetase I, SpoT/RelA K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D Calni_1298 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D Calni_1302 protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP
D Calni_1257 iojap-like protein K09710 ybeB; ribosome-associated protein
D Calni_0965 protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor
D Calni_1429 sigma 54 modulation protein/ribosomal protein S30EA K05808 hpf; ribosome hibernation promoting factor
D Calni_0139 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase
D Calni_1220 protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:cni03016]
D Calni_1191 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D Calni_0967 Polynucleotide adenylyltransferase region K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
D Calni_1110 protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8]
D Calni_0984 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D Calni_1082 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D Calni_0469 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Calni_0921 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D Calni_0248 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D Calni_1453 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Calni_0360 lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D Calni_0871 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Calni_0827 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D Calni_1324 Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D Calni_0478 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D Calni_0407 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D Calni_1311 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D Calni_0872 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D Calni_0328 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D Calni_0329 phenylalanyl-tRNA synthetase, beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D Calni_0309 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Calni_1567 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D Calni_1204 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D Calni_0950 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Calni_0752 tRNA (adenine-58-N(1)-) methyltransferase K07442 TRM61; tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit [EC:2.1.1.219 2.1.1.220]
D Calni_0597 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D Calni_0390 tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D Calni_1297 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D Calni_1678 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Calni_0619 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Calni_1792 Sua5/YciO/YrdC/YwlC family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D Calni_1069 tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D Calni_0008 tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D Calni_0009 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Calni_0805 selenide, water dikinase K01008 selD; selenide, water dikinase [EC:2.7.9.3]
D Calni_R0018 RNA component of RNaseP K01978 rnpB; M1 RNA
D Calni_0583 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56]
D Calni_1936 2'-5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
D Calni_0744 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14]
D Calni_2059 glycyl-tRNA synthetase, beta subunit K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14]
D Calni_2047 glutamyl-tRNA synthetase K09698 gltX; nondiscriminating glutamyl-tRNA synthetase [EC:6.1.1.24]
D Calni_1253 CMP/dCMP deaminase zinc-binding protein K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D Calni_0976 dihydrouridine synthase DuS K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D Calni_1840 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D Calni_0603 MiaB-like tRNA modifying enzyme K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D Calni_1108 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Calni_2012 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D Calni_1256 tRNA/rRNA methyltransferase (SpoU) K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D Calni_0728 protein of unknown function Met10 K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D Calni_1891 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D Calni_1239 S-adenosylmethionine--tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D Calni_1217 exsB protein K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20]
D Calni_1563 preQ(0) biosynthesis protein QueD K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D Calni_1562 Radical SAM domain protein K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D Calni_2018 protein of unknown function DUF208 K09765 queH; epoxyqueuosine reductase [EC:1.17.99.6]
D Calni_0081 tRNA 2-selenouridine synthase K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3]
D Calni_1240 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D Calni_1447 tRNA(Ile)-lysidine synthetase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D Calni_0879 peptidase M22 glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D Calni_0975 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D Calni_1314 Uncharacterized protein family UPF0079, ATPase K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D Calni_0671 ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D Calni_1295 polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:cni03012]
D Calni_1300 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Calni_1323 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Calni_1476 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D Calni_1414 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Calni_1509 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Calni_1536 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Calni_1036 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Calni_1510 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Calni_1102 selenocysteine-specific translation elongation factor K03833 selB; selenocysteine-specific elongation factor
D Calni_0296 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1
D Calni_2002 ribosome recycling factor K02838 frr; ribosome recycling factor
D Calni_0297 protein-(glutamine-N5) methyltransferase, release factor-specific K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D Calni_0240 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D Calni_1485 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1
D Calni_0233 translation elongation factor P K02356 efp; elongation factor P
D Calni_0906 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2
C 03110 Chaperones and folding catalysts [BR:cni03110]
D Calni_1136 ATP-dependent chaperone ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D Calni_0202 ATPase AAA-2 domain protein K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D Calni_1040 ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D Calni_1517 heat shock protein HslVU, ATPase subunit HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU
D Calni_0147 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Calni_0252 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Calni_2032 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Calni_1134 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Calni_0253 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Calni_0251 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Calni_1133 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Calni_1043 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Calni_1634 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein
D Calni_2033 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Calni_0951 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Calni_0953 protease Do K04771 degP; serine protease Do [EC:3.4.21.107]
D Calni_1445 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-]
D Calni_1472 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D Calni_1997 hydrogenase nickel insertion protein HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF
D Calni_1996 hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB
D Calni_0808 cytoplasmic chaperone TorD K23349 dmsD; putative dimethyl sulfoxide reductase chaperone
D Calni_0191 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D Calni_0914 peptidylprolyl isomerase FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
D Calni_0077 SurA domain K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D Calni_0370 thioredoxin K03671 TXN; thioredoxin
C 04131 Membrane trafficking [BR:cni04131]
D Calni_1237 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D Calni_1594 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Calni_1845 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Calni_0147 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 04121 Ubiquitin system [BR:cni04121]
C 03051 Proteasome [BR:cni03051]
D Calni_0147 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:cni03032]
D Calni_1339 ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D Calni_1071 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Calni_1034 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Calni_0372 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Calni_0002 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Calni_2093 Chromosomal replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D Calni_0104 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D Calni_1369 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D Calni_0516 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Calni_0109 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Calni_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Calni_0471 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Calni_0770 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_0079 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_1210 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_1372 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Calni_1995 Ribonuclease H K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D Calni_1779 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Calni_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Calni_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Calni_1107 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:cni03036]
D Calni_1228 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3]
D Calni_1071 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Calni_1034 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Calni_0372 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Calni_0002 chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D Calni_2093 Chromosomal replication initiator DnaA K02313 dnaA; chromosomal replication initiator protein
D Calni_1670 RNA-binding protein Hfq K03666 hfq; host factor-I protein
D Calni_1538 RNA chaperone Hfq K03666 hfq; host factor-I protein
D Calni_0622 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D Calni_0610 hypothetical protein K03632 mukB; chromosome partition protein MukB
D Calni_0461 chromosome segregation protein SMC K03529 smc; chromosome segregation protein
D Calni_1566 chromosome segregation and condensation protein ScpA K05896 scpA; segregation and condensation protein A
D Calni_1565 chromosome segregation and condensation protein, ScpB K06024 scpB; segregation and condensation protein B
D Calni_1721 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Calni_1666 Septum formation initiator K05589 ftsB; cell division protein FtsB
D Calni_0970 Sigma 54 interacting domain protein K09812 ftsE; cell division transport system ATP-binding protein
D Calni_1731 Peptidoglycan glycosyltransferase K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D Calni_1411 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D Calni_1722 Polypeptide-transport-associated domain protein FtsQ-type K03589 ftsQ; cell division protein FtsQ
D Calni_1726 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Calni_0971 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Calni_1720 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Calni_0331 hypothetical protein K09888 zapA; cell division protein ZapA
D Calni_0330 hypothetical protein K09892 zapB; cell division protein ZapB
D Calni_1271 AFG1-family ATPase K06916 zapE; cell division protein ZapE
D Calni_2064 cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D Calni_0571 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Calni_0362 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Calni_0363 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC
D Calni_0366 cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA
D Calni_1306 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Calni_2092 hypothetical protein K03496 parA; chromosome partitioning protein
D Calni_1305 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Calni_2091 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Calni_0009 glucose inhibited division protein A K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D Calni_0010 methyltransferase GidB K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D Calni_1108 gid protein K04094 trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:2.1.1.74]
D Calni_1109 integrase family protein K03733 xerC; integrase/recombinase XerC
D Calni_2087 integrase family protein K04763 xerD; integrase/recombinase XerD
D Calni_0968 integrase family protein K04763 xerD; integrase/recombinase XerD
D Calni_0356 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Calni_0882 ribosome biogenesis GTP-binding protein YsxC K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:cni03400]
D Calni_0600 methylated-DNA/protein-cysteinemethyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D Calni_0037 Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D Calni_1774 endonuclease III; DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Calni_0621 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D Calni_0915 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D Calni_1013 phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27]
D Calni_1384 apurinic endonuclease Apn1 K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2]
D Calni_1138 Deoxyribonuclease V K05982 E3.1.21.7; deoxyribonuclease V [EC:3.1.21.7]
D Calni_0665 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Calni_0058 single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D Calni_1779 DNA ligase, NAD-dependent K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D Calni_2063 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A
D Calni_0667 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B
D Calni_1412 excinuclease ABC, C subunit K03703 uvrC; excinuclease ABC subunit C
D Calni_1087 ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D Calni_1528 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D Calni_1527 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D Calni_1480 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D Calni_1015 DNA-directed RNA polymerase, omega subunit K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
D Calni_1739 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D Calni_0424 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D Calni_1212 DNA mismatch repair protein MutS domain protein K07456 mutS2; DNA mismatch repair protein MutS2
D Calni_1068 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D Calni_1665 exodeoxyribonuclease VII, large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
D Calni_0273 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
D Calni_0109 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D Calni_0003 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D Calni_0471 DNA polymerase III delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D Calni_0770 DNA-directed DNA polymerase K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_0079 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_1210 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D Calni_1372 DNA polymerase III, subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D Calni_0516 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Calni_0100 RecA protein K03553 recA; recombination protein RecA
D Calni_1232 Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D Calni_0999 Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D Calni_1233 crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D Calni_0753 primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D Calni_0998 DNA replication and repair protein RadA K04485 radA; DNA repair protein RadA/Sms
D Calni_0004 SMC domain protein K03629 recF; DNA replication and repair protein RecF
D Calni_0994 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Calni_0145 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Calni_0577 putative transcriptional regulator K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D Calni_1374 DNA replication and repair protein RecR K06187 recR; recombination protein RecR
D Calni_0278 DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D Calni_1919 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Calni_1599 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Calni_0006 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D Calni_0005 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D Calni_1107 DNA topoisomerase I K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D Calni_1071 histone family protein DNA-binding protein K03530 hupB; DNA-binding protein HU-beta
D Calni_1034 histone family protein DNA-binding protein K04764 ihfA; integration host factor subunit alpha
D Calni_0372 histone family protein DNA-binding protein K05788 ihfB; integration host factor subunit beta
D Calni_0693 DNA-directed DNA polymerase K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D Calni_0691 transcriptional repressor, LexA family K01356 lexA; repressor LexA [EC:3.4.21.88]
D Calni_0102 regulatory protein RecX K03565 recX; regulatory protein
D Calni_1449 DEAD/DEAH box helicase domain protein K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3]
D Calni_0614 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
C 03029 Mitochondrial biogenesis [BR:cni03029]
D Calni_1300 translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D Calni_1323 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3
D Calni_1414 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts
D Calni_1509 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Calni_1536 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Calni_1036 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Calni_1510 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G
D Calni_0962 GTP-binding protein Era K03595 era; GTPase
D Calni_0309 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D Calni_0469 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D Calni_0871 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D Calni_1453 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D Calni_0083 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
D Calni_1047 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
D Calni_0082 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7]
D Calni_0516 single-strand binding protein K03111 ssb; single-strand DNA-binding protein
D Calni_2066 surface antigen variable number repeat-containing protein K07277 SAM50; outer membrane protein insertion porin family
D Calni_0300 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Calni_0252 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Calni_0251 GrpE protein K03687 GRPE; molecular chaperone GrpE
D Calni_2032 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Calni_2033 Chaperonin Cpn10 K04078 groES; chaperonin GroES
D Calni_1134 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Calni_0253 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D Calni_1678 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Calni_0619 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Calni_0356 ATPase-like, ParA/MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D Calni_1028 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Calni_0147 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:cni02000]
D Calni_0167 lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D Calni_1526 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Calni_0690 molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 modA; molybdate transport system substrate-binding protein
D Calni_1522 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Calni_0689 molybdate ABC transporter, inner membrane subunit K02018 modB; molybdate transport system permease protein
D Calni_1521 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Calni_0688 ABC transporter related protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5]
D Calni_0021 Domain of unknown function DUF1858 K02055 ABC.SP.S; putative spermidine/putrescine transport system substrate-binding protein
D Calni_0124 hypothetical protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein
D Calni_0122 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein
D Calni_1283 nucleoside-binding protein K07335 bmpA; basic membrane protein A and related proteins
D Calni_1285 inner-membrane translocator K23535 nupB; general nucleoside transport system permease protein
D Calni_1286 nucleoside ABC transporter membrane protein K23536 nupC; general nucleoside transport system permease protein
D Calni_1284 nucleoside ABC transporter ATP-binding protein K23537 nupA; general nucleoside transport system ATP-binding protein
D Calni_1395 Conserved hypothetical protein CHP00245 K02069 STAR2; UDP-glucose/iron transport system permease protein
D Calni_1396 ABC transporter related protein K02068 STAR1; UDP-glucose/iron transport system ATP-binding protein
D Calni_0910 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Calni_1582 Mammalian cell entry related domain protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D Calni_1580 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Calni_0908 protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D Calni_0909 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D Calni_1576 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein
D Calni_1575 binding-protein-dependent transport systems inner membrane component K02037 pstC; phosphate transport system permease protein
D Calni_1574 phosphate ABC transporter, inner membrane subunit PstA K02038 pstA; phosphate transport system permease protein
D Calni_1573 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1]
D Calni_1822 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_0891 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_0892 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_0698 Extracellular ligand-binding receptor K01999 livK; branched-chain amino acid transport system substrate-binding protein
D Calni_1824 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Calni_0893 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Calni_0697 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein
D Calni_0696 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Calni_0894 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein
D Calni_1823 inner-membrane translocator K01998 livM; branched-chain amino acid transport system permease protein
D Calni_1826 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Calni_0695 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Calni_0895 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein
D Calni_0694 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Calni_0896 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Calni_1821 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein
D Calni_0458 protein of unknown function DUF534 K01989 K01989; putative tryptophan/tyrosine transport system substrate-binding protein
D Calni_0459 inner-membrane translocator K05832 K05832; putative tryptophan/tyrosine transport system permease protein
D Calni_0460 ABC transporter related protein K05833 K05833; putative tryptophan/tyrosine transport system ATP-binding protein
D Calni_0169 multi-sensor hybrid histidine kinase K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Calni_1750 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Calni_1817 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein
D Calni_1749 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Calni_1751 polar amino acid ABC transporter, inner membrane subunit K02029 ABC.PA.P; polar amino acid transport system permease protein
D Calni_1816 amino acid ABC transporter membrane protein, PAAT family K02029 ABC.PA.P; polar amino acid transport system permease protein
D Calni_1815 amino acid ABC transporter ATP-binding protein, PAAT family K02028 ABC.PA.A; polar amino acid transport system ATP-binding protein [EC:7.4.2.1]
D Calni_0862 extracellular solute-binding protein family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D Calni_0861 binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein
D Calni_0860 binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D Calni_1370 oligopeptide/dipeptide ABC transporter, ATPase subunit K02031 ddpD; peptide/nickel transport system ATP-binding protein
D Calni_2114 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Calni_1880 periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D Calni_2112 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Calni_1881 transport system permease protein K25027 btuC; cobalamin transport system permease protein
D Calni_2113 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Calni_1882 ABC transporter related protein K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D Calni_0777 periplasmic solute binding protein K09815 znuA; zinc transport system substrate-binding protein
D Calni_0779 ABC-3 protein K09816 znuB; zinc transport system permease protein
D Calni_0778 ABC transporter related protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20]
D Calni_0440 cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein
D Calni_0441 cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein
D Calni_0439 ABC transporter related protein K02006 cbiO; cobalt/nickel transport system ATP-binding protein
D Calni_0843 permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D Calni_0844 permease YjgP/YjgQ family protein K11720 lptG; lipopolysaccharide export system permease protein
D Calni_1431 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D Calni_0542 ABC-2 type transporter K25181 ybhS; drug efflux transport system permease protein
D Calni_0543 ABC transporter related protein K25182 ybhF; drug efflux transport system ATP-binding protein
D Calni_0544 hypothetical protein K25183 ybhG; membrane fusion protein YbhG
D Calni_0133 protein of unknown function DUF214 K09808 lolC_E; lipoprotein-releasing system permease protein
D Calni_0132 ABC transporter related protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D Calni_1684 cytochrome c assembly protein K02195 ccmC; heme exporter protein C
D Calni_1685 cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B
D Calni_1686 ABC transporter related protein K02193 ccmA; heme exporter protein A [EC:7.6.2.5]
D Calni_0971 protein of unknown function DUF214 K09811 ftsX; cell division transport system permease protein
D Calni_0970 Sigma 54 interacting domain protein K09812 ftsE; cell division transport system ATP-binding protein
D Calni_0541 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Calni_2108 ABC-2 type transporter K01992 ABC-2.P; ABC-2 type transport system permease protein
D Calni_2109 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D Calni_0835 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Calni_0836 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Calni_0040 protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein
D Calni_1894 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Calni_0039 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Calni_0814 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D Calni_0547 MATE efflux family protein K26939 norM; MATE family, multidrug efflux pump
D Calni_1984 MATE efflux family protein K26937 dinF; MATE family, multidrug efflux pump
D Calni_0263 major facilitator superfamily MFS_1 K08177 oxlT; MFS transporter, OFA family, oxalate/formate antiporter
D Calni_1901 drug resistance transporter, EmrB/QacA subfamily K03446 emrB; MFS transporter, DHA2 family, multidrug resistance protein
D Calni_0487 major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein
D Calni_1420 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9]
D Calni_1421 Phosphotransferase system, phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr
D Calni_1424 PTS system sorbose subfamily IIB component K02794 manX; mannose PTS system EIIAB component [EC:2.7.1.191]
D Calni_1425 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191]
D Calni_1423 hypothetical protein K02795 manY; mannose PTS system EIIC component
D Calni_1422 PTS system mannose/fructose/sorbose family IID component K02796 manZ; mannose PTS system EIID component
D Calni_1428 putative PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-]
D Calni_0443 TrkA-N domain protein K10716 kch; voltage-gated potassium channel
D Calni_0173 ammonium transporter K03320 amt; ammonium transporter, Amt family
D Calni_1715 large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D Calni_0736 lateral flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Calni_0735 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Calni_0636 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB
D Calni_0637 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD
D Calni_1555 magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter
D Calni_1346 camphor resistance protein CrcB K06199 crcB; fluoride exporter
D Calni_0963 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Calni_1009 OmpA/MotB domain protein K03286 TC.OOP; OmpA-OmpF porin, OOP family
D Calni_0340 membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein
D Calni_1879 TonB-dependent receptor plug K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D Calni_1326 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1700 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1896 outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D Calni_0573 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Calni_2066 surface antigen variable number repeat-containing protein K07277 SAM50; outer membrane protein insertion porin family
D Calni_0300 outer membrane protein assembly complex, YaeT protein K07277 SAM50; outer membrane protein insertion porin family
D Calni_0477 outer membrane assembly lipoprotein YfiO K05807 bamD; outer membrane protein assembly factor BamD
D Calni_1432 OstA family protein K09774 lptA; lipopolysaccharide export system protein LptA
D Calni_0052 OstA family protein K04744 lptD; LPS-assembly protein
D Calni_0176 cation diffusion facilitator family transporter K16264 czcD; cobalt-zinc-cadmium efflux system protein
D Calni_0519 cation diffusion facilitator family transporter K13283 fieF; ferrous-iron efflux pump FieF
D Calni_1320 protein of unknown function DUF6 transmembrane K03298 TC.DME; drug/metabolite transporter, DME family
D Calni_1132 RarD protein, DMT superfamily transporter K05786 rarD; chloramphenicol-sensitive protein RarD
D Calni_1738 C4-dicarboxylate transporter/malic acid transport protein K03304 tehA; tellurite resistance protein
D Calni_0482 putative sodium symporter protein K14393 actP; cation/acetate symporter
D Calni_0769 SSS sodium solute transporter superfamily K14393 actP; cation/acetate symporter
D Calni_0457 sodium/hydrogen exchanger K26735 KEA4_5_6; K+:H+ antiporter
D Calni_1835 sodium/hydrogen exchanger K26731 CHX; K+:H+ antiporter
D Calni_1400 H(+)-transporting two-sector ATPase K03498 trkH; trk/ktr system potassium uptake protein
D Calni_1218 potassium uptake protein, TrkH family K03498 trkH; trk/ktr system potassium uptake protein
D Calni_1399 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Calni_1219 TrkA-N domain protein K03499 trkA; trk/ktr system potassium uptake protein
D Calni_1652 uracil-xanthine permease K02824 uraA; uracil permease
D Calni_1394 Cl-channel voltage-gated family protein K03281 clcA; chloride channel protein, CIC family
D Calni_2050 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family
D Calni_1777 sulphate transporter K03321 TC.SULP; sulfate permease, SulP family
D Calni_1231 natural resistance-associated macrophage protein K03322 mntH; manganese transport protein
D Calni_1707 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D Calni_1703 TRAP dicarboxylate transporter, DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP
D Calni_1706 Tripartite ATP-independent periplasmic transporter DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit
D Calni_1705 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Calni_0386 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit
D Calni_1704 TRAP C4-dicarboxylate transport system permease DctM subunit K21393 yiaN; TRAP-type transport system large permease protein
D Calni_0384 Extracellular solute-binding protein, family 7 K21395 yiaO; TRAP-type transport system periplasmic protein
D Calni_0180 arsenical-resistance protein K03325 ACR3; arsenite transporter
D Calni_0527 putative multicomponent Na+-H+ antiporter subunit A K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Calni_0528 Na+/H+ antiporter MnhB subunit-related protein K05566 mnhB; multicomponent Na+:H+ antiporter subunit B
D Calni_0529 multisubunit sodium/proton antiporter, MrpC subunit K05567 mnhC; multicomponent Na+:H+ antiporter subunit C
D Calni_0530 NADH/Ubiquinone/plastoquinone (complex I) K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Calni_0531 multisubunit sodium/proton antiporter, MrpD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Calni_0533 multisubunit sodium/proton antiporter, MrpD subunit K05568 mnhD; multicomponent Na+:H+ antiporter subunit D
D Calni_0524 cation antiporter K05569 mnhE; multicomponent Na+:H+ antiporter subunit E
D Calni_0525 multisubunit sodium/proton antiporter, MrpF subunit K05570 mnhF; multicomponent Na+:H+ antiporter subunit F
D Calni_0526 monovalent cation/proton antiporter, MnhG/PhaG subunit K05571 mnhG; multicomponent Na+:H+ antiporter subunit G
D Calni_1205 integral membrane protein MviN K03980 murJ; putative peptidoglycan lipid II flippase
D Calni_0214 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Calni_0783 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Calni_0287 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Calni_0181 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins
D Calni_1342 multiple antibiotic resistance (MarC)-related protein K05595 marC; multiple antibiotic resistance protein
D Calni_1726 cell division protein FtsW K03588 ftsW; cell division protein FtsW
D Calni_1186 protein of unknown function DUF204 K23242 mntP; manganese efflux pump family protein
D Calni_1883 TonB family protein K03832 tonB; periplasmic protein TonB
D Calni_1045 TonB family protein K03832 tonB; periplasmic protein TonB
D Calni_0241 V-type H(+)-translocating pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D Calni_0113 cytochrome c biogenesis protein transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein
D Calni_0185 molybdopterin oxidoreductase K08352 phsA; thiosulfate reductase / polysulfide reductase chain A [EC:1.8.5.5]
D Calni_1900 secretion protein HlyD family protein K03543 emrA; membrane fusion protein, multidrug efflux system
D Calni_0571 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Calni_1327 efflux transporter, RND family, MFP subunit K07799 mdtA; membrane fusion protein, multidrug efflux system
D Calni_1021 ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D Calni_1687 cytochrome c assembly protein K02198 ccmF; cytochrome c-type biogenesis protein CcmF
C 02044 Secretion system [BR:cni02044]
D Calni_1326 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1700 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1896 outer membrane efflux protein K12543 lapE; outer membrane protein, adhesin transport system
D Calni_0397 hypothetical protein K02450 gspA; general secretion pathway protein A
D Calni_1560 general secretion pathway protein A K02450 gspA; general secretion pathway protein A
D Calni_0308 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Calni_0149 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Calni_0406 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Calni_1648 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D Calni_1646 Type II secretion system F domain K02653 pilC; type IV pilus assembly protein PilC
D Calni_0653 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH
D Calni_0655 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Calni_1464 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Calni_1463 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Calni_1462 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Calni_1461 hypothetical protein K02665 pilP; type IV pilus assembly protein PilP
D Calni_1460 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D Calni_0403 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D Calni_1207 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Calni_1647 twitching motility protein K02669 pilT; twitching motility protein PilT
D Calni_0101 twitching motility protein K02669 pilT; twitching motility protein PilT
D Calni_0163 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D Calni_0160 von Willebrand factor type A K02674 pilY1; type IV pilus assembly protein PilY1
D Calni_0418 hypothetical protein K10924 mshA; MSHA pilin protein MshA
D Calni_0394 hypothetical protein K10927 mshD; MSHA pilin protein MshD
D Calni_0417 Type II secretion system F domain K12278 mshG; MSHA biogenesis protein MshG
D Calni_0395 hypothetical protein K12285 mshO; MSHA biogenesis protein MshO
D Calni_0396 hypothetical protein K12286 mshP; MSHA biogenesis protein MshP
D Calni_0414 LamG domain protein jellyroll fold domain protein K12287 mshQ; MSHA biogenesis protein MshQ
D Calni_1097 protein of unknown function YGGT K02221 yggT; YggT family protein
D Calni_0591 CMP/dCMP deaminase zinc-binding protein K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D Calni_0701 ComEC/Rec2-related protein K02238 comEC; competence protein ComEC
D Calni_0958 Late competence development protein ComFB K02241 comFB; competence protein ComFB
D Calni_0926 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Calni_0759 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Calni_1541 type III secretion exporter K04061 flhB2; flagellar biosynthesis protein
D Calni_1787 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Calni_1785 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D Calni_1784 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Calni_0933 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Calni_1334 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Calni_1333 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Calni_1332 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Calni_1331 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Calni_0760 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Calni_1943 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D Calni_1242 protein-export membrane protein SecD K03072 secD; preprotein translocase subunit SecD
D Calni_1534 preprotein translocase, SecE subunit K03073 secE; preprotein translocase subunit SecE
D Calni_1243 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF
D Calni_0863 preprotein translocase, SecG subunit K03075 secG; preprotein translocase subunit SecG
D Calni_1488 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY
D Calni_2008 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D Calni_1086 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor
D Calni_1241 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC
D Calni_1028 membrane protein insertase, YidC/Oxa1 family K03217 yidC; YidC/Oxa1 family membrane protein insertase
D Calni_1793 sec-independent translocation protein mttA/Hcf106 K03116 tatA; sec-independent protein translocase protein TatA
D Calni_0392 twin-arginine translocation protein, TatA/E family subunit K03116 tatA; sec-independent protein translocase protein TatA
D Calni_1794 Sec-independent protein translocase, TatC subunit K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:cni02042]
D Calni_0963 protein of unknown function DUF21 K03699 tlyC; magnesium and cobalt exporter, CNNM family
D Calni_1640 channel protein, hemolysin III family K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:cni02022]
D Calni_1571 multi-sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D Calni_1570 two component transcriptional regulator, winged helix family K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB
D Calni_0450 two component transcriptional regulator, winged helix family K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D Calni_1808 histidine kinase K13533 kinE; two-component system, sporulation sensor kinase E [EC:2.7.13.3]
D Calni_1537 response regulator receiver protein K02490 spo0F; two-component system, response regulator, stage 0 sporulation protein F
D Calni_0669 histidine kinase K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3]
D Calni_0670 two component, sigma54 specific, transcriptional regulator, Fis family K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG
D Calni_1559 integral membrane sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3]
D Calni_1558 two component, sigma54 specific, transcriptional regulator, Fis family K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX
D Calni_1903 signal transduction histidine kinase, nitrogen specific, NtrB K07709 zraS; two-component system, NtrC family, sensor histidine kinase HydH [EC:2.7.13.3]
D Calni_1809 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC
D Calni_1645 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Calni_1663 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D Calni_0267 response regulator receiver sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Calni_0512 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Calni_1250 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Calni_1288 integral membrane sensor signal transduction histidine kinase K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3]
D Calni_0936 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Calni_0934 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Calni_0931 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Calni_0785 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Calni_0656 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Calni_0653 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH
D Calni_0798 response regulator receiver protein K19623 phcQ; two-component system, probable response regulator PhcQ
D Calni_0387 response regulator receiver modulated protein serine/threonine phosphatase K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator
C 02035 Bacterial motility proteins [BR:cni02035]
D Calni_0936 CheA signal transduction histidine kinase K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3]
D Calni_0993 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Calni_0654 CheW protein K03408 cheW; purine-binding chemotaxis protein CheW
D Calni_0307 CheC domain protein K03409 cheX; chemotaxis protein CheX
D Calni_0943 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Calni_0270 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80]
D Calni_0931 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44]
D Calni_0934 response regulator receiver protein K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY
D Calni_0785 response regulator receiver modulated CheW protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV
D Calni_0099 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0256 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0435 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0500 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0763 methyl-accepting chemotaxis sensory transducer with Cache sensor K03406 mcp; methyl-accepting chemotaxis protein
D Calni_0790 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein
D Calni_1785 Flagellar assembly protein FliH/Type III secretion system HrpE K02411 fliH; flagellar assembly protein FliH
D Calni_1784 type III secretion system ATPase, FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8]
D Calni_1783 flagellar protein FliJ K02413 fliJ; flagellar protein FliJ
D Calni_1333 hypothetical protein K02418 fliO; flagellar protein FliO/FliZ
D Calni_1332 flagellar biosynthetic protein FliP K02419 fliP; flagellar biosynthesis protein FliP
D Calni_1331 flagellar biosynthetic protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ
D Calni_0760 flagellar biosynthetic protein FliR K02421 fliR; flagellar biosynthesis protein FliR
D Calni_0926 flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA
D Calni_0759 flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB
D Calni_1786 flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG
D Calni_0932 flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM
D Calni_0933 flagellar motor switch protein FliN K02417 fliN; flagellar motor switch protein FliN
D Calni_1334 surface presentation of antigens (SPOA) protein K02417 fliN; flagellar motor switch protein FliN
D Calni_1787 flagellar M-ring protein FliF K02409 fliF; flagellar M-ring protein FliF
D Calni_0222 flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI
D Calni_0448 flagella basal body P-ring formation protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA
D Calni_0223 flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH
D Calni_1335 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Calni_0807 flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL
D Calni_1788 flagellar hook-basal body complex subunit FliE K02408 fliE; flagellar hook-basal body complex protein FliE
D Calni_1458 Flagellar hook-length control protein-like, C-terminal domain K02414 fliK; flagellar hook-length control protein FliK
D Calni_1790 flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB
D Calni_1789 flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC
D Calni_1457 flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD
D Calni_0446 flagellar basal-body rod protein FlgF K02391 flgF; flagellar basal-body rod protein FlgF
D Calni_0447 flagellar basal-body rod protein FlgG K02392 flgG; flagellar basal-body rod protein FlgG
D Calni_1244 fagellar hook-basal body protein K02392 flgG; flagellar basal-body rod protein FlgG
D Calni_0221 Flagellar protein FlgJ K02395 flgJ; peptidoglycan hydrolase FlgJ
D Calni_1456 fagellar hook-basal body protein K02390 flgE; flagellar hook protein FlgE
D Calni_0218 flagellar hook-associated protein FlgK K02396 flgK; flagellar hook-associated protein 1
D Calni_0788 flagellin domain protein K02406 fliC; flagellin
D Calni_0706 flagellin domain protein K02406 fliC; flagellin
D Calni_1197 flagellar hook-associated 2 domain-containing protein K02407 fliD; flagellar hook-associated protein 2
D Calni_1196 flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS
D Calni_0930 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA
D Calni_0736 lateral flagellar motor protein MotA K02556 motA; chemotaxis protein MotA
D Calni_0735 OmpA/MotB domain protein K02557 motB; chemotaxis protein MotB
D Calni_0216 protein of unknown function DUF180 K13626 fliW; flagellar assembly factor FliW
D Calni_0789 flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG
D Calni_0927 flagellar biosynthetic protein FlhF K02404 flhF; flagellar biosynthesis protein FlhF
D Calni_1631 flagellar biosynthesis protein FlhG K04562 flhG; flagellar biosynthesis protein FlhG
D Calni_0928 cobyrinic acid ac-diamide synthase K04562 flhG; flagellar biosynthesis protein FlhG
D Calni_0033 type IV pilus assembly PilZ K04562 flhG; flagellar biosynthesis protein FlhG
D Calni_0653 response regulator receiver protein K02658 pilH; twitching motility two-component system response regulator PilH
D Calni_0655 methyl-accepting chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ
D Calni_0656 CheA signal transduction histidine kinase K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator)
D Calni_1663 two component, sigma54 specific, transcriptional regulator, Fis family K02667 pilR; two-component system, NtrC family, response regulator PilR
D Calni_1645 signal transduction histidine kinase, nitrogen specific, NtrB K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3]
D Calni_1207 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT
D Calni_1647 twitching motility protein K02669 pilT; twitching motility protein PilT
D Calni_0101 twitching motility protein K02669 pilT; twitching motility protein PilT
D Calni_0149 hypothetical protein K02650 pilA; type IV pilus assembly protein PilA
D Calni_0406 type II secretion system protein E K02652 pilB; type IV pilus assembly protein PilB
D Calni_1648 type IV-A pilus assembly ATPase PilB K02652 pilB; type IV pilus assembly protein PilB
D Calni_1646 Type II secretion system F domain K02653 pilC; type IV pilus assembly protein PilC
D Calni_0308 Prepilin peptidase K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-]
D Calni_1460 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D Calni_0403 type II and III secretion system protein K02666 pilQ; type IV pilus assembly protein PilQ
D Calni_1461 hypothetical protein K02665 pilP; type IV pilus assembly protein PilP
D Calni_1462 hypothetical protein K02664 pilO; type IV pilus assembly protein PilO
D Calni_1463 Fimbrial assembly family protein K02663 pilN; type IV pilus assembly protein PilN
D Calni_1464 type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM
D Calni_0163 hypothetical protein K02672 pilW; type IV pilus assembly protein PilW
D Calni_0160 von Willebrand factor type A K02674 pilY1; type IV pilus assembly protein PilY1
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:cni04812]
D Calni_1636 protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein
D Calni_0362 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Calni_1720 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Calni_1721 cell division protein FtsA K03590 ftsA; cell division protein FtsA
D Calni_1306 chromosome segregation ATPase K03496 parA; chromosome partitioning protein
D Calni_2092 hypothetical protein K03496 parA; chromosome partitioning protein
D Calni_1305 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D Calni_2091 parB-like partition protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:cni04147]
D Calni_0147 Heat shock protein Hsp90 K04079 HSP90A; molecular chaperone HtpG
D Calni_1122 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D Calni_1594 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D Calni_1845 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D Calni_1904 3-Cys thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D Calni_2032 chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D Calni_0252 chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D Calni_1448 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D Calni_0135 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D Calni_1509 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Calni_1536 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu
D Calni_0950 histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D Calni_0349 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0555 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_1825 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_0716 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D Calni_1354 acetyl-CoA acetyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D Calni_0569 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D Calni_1487 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D Calni_0255 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D Calni_0743 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D Calni_1385 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D Calni_1585 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D Calni_0182 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D Calni_1618 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D Calni_1129 D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D Calni_1080 IMP cyclohydrolase; phosphoribosylaminoimidazolecarboxamide formyltransferase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D Calni_0875 pyridine nucleotide-disulfide oxidoreductase dimerization region K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D Calni_0346 Electron transfer flavoprotein alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit
D Calni_1303 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
C 02048 Prokaryotic defense system [BR:cni02048]
D Calni_1919 CRISPR-associated protein, Cas1 family K15342 cas1; CRISP-associated protein Cas1
D Calni_1599 CRISPR-associated protein Cas1 K15342 cas1; CRISP-associated protein Cas1
D Calni_1597 CRISPR-associated protein Cas2 K09951 cas2; CRISPR-associated protein Cas2
D Calni_1920 CRISPR-associated protein, Cas2 family K09951 cas2; CRISPR-associated protein Cas2
D Calni_1916 CRISPR-associated helicase Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
D Calni_1913 hypothetical protein K19088 cst1; CRISPR-associated protein Cst1
D Calni_1914 CRISPR-associated autoregulator DevR family K19075 cst2; CRISPR-associated protein Cst2
D Calni_1915 CRISPR-associated protein Cas5 K19090 cas5t; CRISPR-associated protein Cas5t
D Calni_1912 CRISPR-associated protein Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-]
D Calni_1613 CRISPR-associated protein, Csm1 family K07016 csm1; CRISPR-associated protein Csm1
D Calni_1612 CRISPR-associated protein, Csm2 family K19138 csm2; CRISPR-associated protein Csm2
D Calni_1611 CRISPR-associated protein, Csm3 family K09002 csm3; CRISPR-associated protein Csm3
D Calni_1610 CRISPR-associated protein, Csm4 family K19139 csm4; CRISPR-associated protein Csm4
D Calni_1609 CRISPR-associated RAMP protein, Csm5 family K19140 csm5; CRISPR-associated protein Csm5
D Calni_1853 Type I site-specific deoxyribonuclease K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Calni_1406 type III restriction protein res subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Calni_0580 type I site-specific deoxyribonuclease, HsdR family K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D Calni_1850 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Calni_0578 restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D Calni_1851 Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Calni_0575 Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Calni_1405 restriction modification system DNA specificity domain K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D Calni_0428 Type II site-specific deoxyribonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D Calni_2100 DNA methylase N-4/N-6 domain protein K00571 E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]
D Calni_1720 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D Calni_0362 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D Calni_0411 protein of unknown function DUF339 K09159 cptB; antitoxin CptB
D Calni_1678 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D Calni_0619 aminotransferase class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules
C 01504 Antimicrobial resistance genes [BR:cni01504]
D Calni_0571 efflux transporter, RND family, MFP subunit K03585 acrA; membrane fusion protein, multidrug efflux system
D Calni_0573 RND efflux system, outer membrane lipoprotein, NodT family K18139 oprM; outer membrane protein, multidrug efflux system
D Calni_1326 outer membrane efflux protein K12340 tolC; outer membrane protein
D Calni_1700 outer membrane efflux protein K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:cni00537]
D Calni_1618 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:cni03100]
D Calni_R0039 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Calni_R0032 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Calni_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D Calni_R0024 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Calni_R0025 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Calni_R0014 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Calni_R0044 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D Calni_R0019 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D Calni_R0010 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D Calni_R0027 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D Calni_R0029 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D Calni_R0008 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D Calni_R0017 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Calni_R0042 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Calni_R0015 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D Calni_R0013 tRNA-His K14226 tRNA-His; tRNA His
D Calni_R0033 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Calni_R0048 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D Calni_R0021 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0001 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0012 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0011 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0022 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D Calni_R0007 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D Calni_R0036 tRNA-Met K14230 tRNA-Met; tRNA Met
D Calni_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met
D Calni_R0035 tRNA-Met K14230 tRNA-Met; tRNA Met
D Calni_R0028 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D Calni_R0020 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Calni_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Calni_R0005 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D Calni_R0002 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Calni_R0043 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Calni_R0016 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D Calni_R0040 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Calni_R0038 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D Calni_R0037 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D Calni_R0041 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D Calni_R0050 tRNA-Val K14237 tRNA-Val; tRNA Val
D Calni_R0009 tRNA-Val K14237 tRNA-Val; tRNA Val
D Calni_R0051 tRNA-Sec K14238 tRNA-Sec; tRNA Sec
D Calni_R0034 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Calni_R0049 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D Calni_R0046 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Calni_R0031 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D Calni_R0030 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Calni_R0045 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D Calni_R0003 RNA component of signal recognition particle K01983 ffs; SRP RNA
D Calni_R0018 RNA component of RNaseP K01978 rnpB; M1 RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D Calni_1862 indolepyruvate ferredoxin oxidoreductase, alpha subunit K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8]
D Calni_1863 Indolepyruvate ferredoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8]
D Calni_0886 carboxynorspermidine dehydrogenase K27502 capadh; carboxyaminopropylagmatine dehydrogenase [EC:1.5.1.55]
D Calni_0057 flavodoxin/nitric oxide synthase K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4]
D Calni_1748 NAD(P)H quinone oxidoreductase, PIG3 family K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D Calni_0348 2-nitropropane dioxygenase precursor K23948 E1.6.5.9; NADH:quinone reductase (non-electrogenic) [EC:1.6.5.9]
D Calni_0272 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Calni_1813 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D Calni_1552 NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2]
D Calni_1551 NADH ubiquinone oxidoreductase 20 kDa subunit K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2]
D Calni_1549 NADH dehydrogenase (quinone) K18331 hndC; NADP-reducing hydrogenase subunit HndC [EC:1.12.1.3]
D Calni_1945 Superoxide reductase K05919 dfx; superoxide reductase [EC:1.15.1.2]
D Calni_0663 Ferroxidase K02217 ftnA; ferritin [EC:1.16.3.2]
D Calni_0179 protein tyrosine phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D Calni_1616 anaerobic ribonucleoside-triphosphate reductase activating protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Calni_0560 Radical SAM domain protein K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4]
D Calni_0261 protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D Calni_0189 apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269]
D Calni_0550 transglutaminase domain-containing protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13]
D Calni_0916 AIG2 family protein K19761 GGACT; gamma-glutamylaminecyclotransferase [EC:2.3.2.-]
D Calni_1800 glycosyl transferase group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D Calni_0683 NAD(+)--dinitrogen-reductase ADP-D-ribosyltransferase K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37]
D Calni_1525 modD protein K03813 modD; molybdenum transport protein [EC:2.4.2.-]
D Calni_1379 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 larB; pyridinium-3,5-biscarboxylic acid mononucleotide synthase [EC:2.5.1.143]
D Calni_0246 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D Calni_0559 ApbE family lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D Calni_1778 protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33]
D Calni_0754 protein of unknown function DUF344 K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33]
D Calni_1865 (Glutamate--ammonia-ligase) adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89]
D Calni_1443 protein of unknown function DUF147 K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D Calni_1427 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-]
D Calni_1189 hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1]
D Calni_0211 Appr-1-p processing domain protein K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106]
D Calni_1359 thioesterase superfamily protein K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D Calni_0839 PHP domain protein K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]
D Calni_0546 putative phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D Calni_0203 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D Calni_1393 metal dependent phosphohydrolase K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
D Calni_0922 hydrolase, TatD family K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D Calni_0682 ADP-ribosyl-(dinitrogen reductase) hydrolase K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24]
D Calni_1944 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Calni_0205 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D Calni_0563 endoribonuclease L-PSP K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D Calni_0552 ATPase associated with various cellular activities AAA_3 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D Calni_1315 carbohydrate kinase, YjeF related protein K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D Calni_1892 hypothetical protein K06864 larE; pyridinium-3,5-biscarboxylic acid mononucleotide sulfurtransferase [EC:4.4.1.37]
D Calni_1837 protein of unknown function DUF111 K09121 larC; pyridinium-3,5-bisthiocarboxylic acid mononucleotide nickel chelatase [EC:4.99.1.12]
D Calni_2041 CoA-substrate-specific enzyme activase K23876 hgdC; (R)-2-hydroxyacyl-CoA dehydratese activating ATPase [EC:5.6.1.9]
D Calni_0589 electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2]
D Calni_0590 electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2]
D Calni_0585 electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2]
D Calni_0632 NADH:ubiquinone oxidoreductase, subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D Calni_0631 NADH:ubiquinone oxidoreductase, subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D Calni_0630 NADH:ubiquinone oxidoreductase, subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D Calni_0629 NADH:ubiquinone oxidoreductase, subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D Calni_0628 NADH:ubiquinone oxidoreductase, subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D Calni_0627 NADH:ubiquinone oxidoreductase, subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D Calni_0825 heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9]
C 99981 Carbohydrate metabolism
D Calni_0493 sugar fermentation stimulation protein K06206 sfsA; sugar fermentation stimulation protein A
D Calni_1819 CBS domain containing membrane protein K04767 acuB; acetoin utilization protein AcuB
D Calni_1713 protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG
C 99982 Energy metabolism
D Calni_0588 electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G
D Calni_0587 electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E
D Calni_0586 electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A
D Calni_1679 FeS cluster assembly scaffold protein NifU K04488 iscU; nitrogen fixation protein NifU and related proteins
D Calni_0680 Dinitrogenase iron-molybdenum cofactor biosynthesis protein K02596 nifX; nitrogen fixation protein NifX
D Calni_0687 nitrogen fixation protein FixT K02593 nifT; nitrogen fixation protein NifT
D Calni_0676 NifZ family protein K02597 nifZ; nitrogen fixation protein NifZ
D Calni_0673 Radical SAM domain protein K02585 nifB; nitrogen fixation protein NifB
D Calni_0679 Nitrogenase K02592 nifN; nitrogenase molybdenum-iron protein NifN
D Calni_0678 Nitrogenase K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE
D Calni_1874 periplasmic nitrate reductase subunit NapG K02573 napG; ferredoxin-type protein NapG
D Calni_1875 ferredoxin-type protein, NapH/MauN family K02574 napH; ferredoxin-type protein NapH
D Calni_0345 Electron transfer flavoprotein alpha/beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D Calni_1098 alanine racemase domain protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D Calni_0422 hypothetical protein K08992 lapA; lipopolysaccharide assembly protein A
D Calni_0423 hypothetical protein K19804 lapB; lipopolysaccharide assembly protein B
C 99987 Cofactor metabolism
D Calni_1408 ABC-1 domain-containing protein K03688 ubiB; ubiquinone biosynthesis protein
D Calni_0110 molybdopterin-guanine dinucleotide biosynthesis protein B K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein
C 99988 Secondary metabolism
C 99999 Others
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D Calni_0026 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Calni_0027 cold-shock DNA-binding domain protein K03704 cspA; cold shock protein
D Calni_2016 Tex-like protein K06959 tex; protein Tex
C 99974 Translation
C 99975 Protein processing
D Calni_1042 trigger factor K03545 tig; trigger factor
D Calni_0376 SsrA-binding protein K03664 smpB; SsrA-binding protein
D Calni_1469 hydrogenase assembly chaperone hypC/hupF K04653 hypC; hydrogenase expression/formation protein HypC
D Calni_1468 hydrogenase expression/formation protein HypD K04654 hypD; hydrogenase expression/formation protein HypD
D Calni_1467 hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE
D Calni_0727 (NiFe) hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF
D Calni_0226 Mg chelatase, subunit ChlI K07391 comM; magnesium chelatase family protein
D Calni_0485 hypothetical protein K07399 resB; cytochrome c biogenesis protein
D Calni_0596 Nodulation efficiency protein NfeD K07403 nfeD; membrane-bound serine protease (ClpP class)
C 99976 Replication and repair
D Calni_0357 DNA repair protein RadC K03630 radC; DNA repair protein RadC
D Calni_0949 protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC
D Calni_0792 HhH-GPD family protein K07457 K07457; endonuclease III related protein
D Calni_1994 Uncharacterized protein family UPF0102 K07460 yraN; putative endonuclease
D Calni_1105 DNA protecting protein DprA K04096 smf; DNA processing protein
D Calni_0332 AAA ATPase central domain protein K07478 ycaJ; putative ATPase
D Calni_2076 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Calni_2094 transposase IS200-family protein K07491 rayT; REP-associated tyrosine transposase
D Calni_0198 transposase mutator type K07493 K07493; putative transposase
D Calni_0725 transposase mutator type K07493 K07493; putative transposase
D Calni_0523 transposase mutator type K07493 K07493; putative transposase
D Calni_1918 transposase mutator type K07493 K07493; putative transposase
D Calni_1072 transposase mutator type K07493 K07493; putative transposase
D Calni_1775 transposase mutator type K07493 K07493; putative transposase
D Calni_0111 transposase mutator type K07493 K07493; putative transposase
D Calni_2097 transposase mutator type K07493 K07493; putative transposase
D Calni_1971 transposase mutator type K07493 K07493; putative transposase
D Calni_2077 transposase, IS605 OrfB family K07496 K07496; putative transposase
D Calni_2095 transposase, IS605 OrfB family K07496 K07496; putative transposase
C 99979 Viral proteins
C 99998 Others
D Calni_1373 Uncharacterized protein family UPF0133 K09747 ebfC; nucleoid-associated protein EbfC
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D Calni_0572 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Calni_1328 acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
D Calni_1128 phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family
D Calni_0210 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D Calni_1856 amino acid carrier protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D Calni_1187 YidE/YbjL duplication K07085 K07085; putative transport protein
C 99978 Cell growth
D Calni_1029 single-stranded nucleic acid binding R3H domain-containing protein K06346 jag; spoIIIJ-associated protein
D Calni_0381 Allophanate hydrolase subunit 1 K06351 kipI; inhibitor of KinA
D Calni_0066 Sulfate transporter/antisigma-factor antagonist STAS K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist)
D Calni_0711 acylneuraminate cytidylyltransferase K07257 spsF; spore coat polysaccharide biosynthesis protein SpsF
D Calni_0972 Peptidase M23 K22719 envC; murein hydrolase activator
C 99993 Cell motility
D Calni_2031 hypothetical protein K07337 K07337; penicillin-binding protein activator
D Calni_1376 mutual gliding protein A K24105 mglA; mutual gliding-motility protein MglA
C 99995 Signaling proteins
D Calni_0168 GTP-binding protein TypA K06207 typA; GTP-binding protein
D Calni_0966 PhoH family protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D Calni_1742 PhoH family protein K07175 phoH2; PhoH-like ATPase
D Calni_1625 PhoH family protein K07175 phoH2; PhoH-like ATPase
D Calni_0480 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D Calni_0767 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase K07182 K07182; CBS domain-containing protein
D Calni_1235 protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein
C 99992 Structural proteins
D Calni_0453 outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein
D Calni_0301 outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein
D Calni_1895 efflux transporter, RND family, MFP subunit K02005 ABC.CD.TX; HlyD family secretion protein
D Calni_1688 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE
D Calni_1677 hypothetical protein K15539 rodZ; cytoskeleton protein RodZ
C 99994 Others
D Calni_1569 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein
D Calni_1392 Integral membrane protein TerC K05794 terC; tellurite resistance protein TerC
D Calni_0209 hemerythrin-like metal-binding protein K07216 hr; hemerythrin
D Calni_0957 methyl-accepting chemotaxis sensory transducer K07216 hr; hemerythrin
B
B 09194 Poorly characterized
C 99996 General function prediction only
D Calni_1213 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D Calni_0540 Patatin K07001 K07001; NTE family protein
D Calni_1767 pyrimidine 5'-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily
D Calni_0952 membrane-bound metal-dependent hydrolase K07038 K07038; inner membrane protein
D Calni_0866 ribonuclease BN K07058 K07058; membrane protein
D Calni_0737 LemA family protein K03744 lemA; LemA protein
D Calni_0195 protein of unknown function SprT K02742 sprT; SprT protein
D Calni_0840 membrane protein of unknown function K08972 K08972; putative membrane protein
C 99997 Function unknown
D Calni_1092 hypothetical protein K06888 K06888; uncharacterized protein
D Calni_1142 DUF234 DEXX-box ATPase K06921 K06921; uncharacterized protein
D Calni_0183 protein of unknown function DUF815 K06923 K06923; uncharacterized protein
D Calni_0337 CoA-binding domain protein K06929 K06929; uncharacterized protein
D Calni_1906 protein of unknown function DUF134 K06933 K06933; uncharacterized protein
D Calni_0044 protein of unknown function UPF0153 K06940 K06940; uncharacterized protein
D Calni_2010 RNA-binding protein (KH domain) K06960 K06960; uncharacterized protein
D Calni_0505 cyclic nucleotide-binding protein K07003 K07003; uncharacterized protein
D Calni_1192 hypothetical protein K07028 K07028; uncharacterized protein
D Calni_1246 GPR1/FUN34/yaaH family protein K07034 K07034; uncharacterized protein
D Calni_1743 NAD-dependent epimerase/dehydratase K07071 K07071; uncharacterized protein
D Calni_0388 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Calni_0538 TRAP transporter solute receptor, TAXI family K07080 K07080; uncharacterized protein
D Calni_0175 permease K07089 K07089; uncharacterized protein
D Calni_1718 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Calni_0049 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Calni_1524 protein of unknown function DUF81 K07090 K07090; uncharacterized protein
D Calni_1754 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Calni_0361 phosphodiesterase, MJ0936 family K07095 K07095; uncharacterized protein
D Calni_0881 phosphoesterase DHHA1 K07097 K07097; uncharacterized protein
D Calni_2090 Sel1 domain protein repeat-containing protein K07126 K07126; uncharacterized protein
D Calni_1401 ATPase K07133 K07133; uncharacterized protein
D Calni_1141 hypothetical protein K07133 K07133; uncharacterized protein
D Calni_2089 ATPase K07133 K07133; uncharacterized protein
D Calni_1755 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein
D Calni_0032 4Fe-4S ferredoxin K07138 K07138; uncharacterized protein
D Calni_1318 conserved hypothetical protein K07139 K07139; uncharacterized protein
D Calni_1340 protein of unknown function DUF164 K07164 K07164; uncharacterized protein
D Calni_1027 protein of unknown function DUF37 K08998 K08998; uncharacterized protein
D Calni_1841 protein of unknown function DUF151 K08999 K08999; uncharacterized protein
D Calni_1214 hypothetical protein K09117 K09117; uncharacterized protein
D Calni_1753 hypothetical protein K09126 K09126; uncharacterized protein
D Calni_1577 protein of unknown function DUF167 K09131 K09131; uncharacterized protein
D Calni_1345 protein of unknown function DUF190 K09137 K09137; uncharacterized protein
D Calni_0264 hypothetical protein K09138 K09138; uncharacterized protein
D Calni_1002 AMMECR1 domain protein K09141 K09141; uncharacterized protein
D Calni_1093 hypothetical protein K09155 K09155; uncharacterized protein
D Calni_0726 protein of unknown function DUF354 K09726 K09726; uncharacterized protein
D Calni_0072 protein of unknown function DUF116 K09729 K09729; uncharacterized protein
D Calni_1764 serine/threonine protein kinase K09749 K09749; uncharacterized protein
D Calni_1299 protein of unknown function DUF503 K09764 K09764; uncharacterized protein
D Calni_1317 protein of unknown function DUF343 K09791 K09791; uncharacterized protein
D Calni_0826 hypothetical protein K09792 K09792; uncharacterized protein
D Calni_0877 hypothetical protein K09794 K09794; uncharacterized protein
D Calni_0974 protein of unknown function DUF610 YibQ K09798 K09798; uncharacterized protein
D Calni_1632 Protein of unknown function DUF2062 K09928 K09928; uncharacterized protein
D Calni_0117 Protein of unknown function DUF2064 K09931 K09931; uncharacterized protein
D Calni_1642 hypothetical protein K09942 K09942; uncharacterized protein
D Calni_1985 hypothetical protein K01163 K01163; uncharacterized protein
D Calni_1127 putative phosphate transport regulator K07220 K07220; uncharacterized protein
!
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 12, 2024