+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Cynoglossus semilaevis (tongue sole)

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs D 103388723 fbl; rRNA 2'-O-methyltransferase fibrillarin K14563 NOP1; rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-] D 103386235 nop56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 103389470 nop58; LOW QUALITY PROTEIN: nucleolar protein 58 K14565 NOP58; nucleolar protein 58 D 103382356 snu13; NHP2-like protein 1 K12845 SNU13; U4/U6 small nuclear ribonucleoprotein SNU13 C Box H/ACA snoRNPs D 103382349 dkc1; H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 103390641 gar1; H/ACA ribonucleoprotein complex subunit 1 K11128 GAR1; H/ACA ribonucleoprotein complex subunit 1 D 103395666 nhp2; H/ACA ribonucleoprotein complex subunit 2 K11129 NHP2; H/ACA ribonucleoprotein complex subunit 2 D 103384695 nop10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 D 103383875 H/ACA ribonucleoprotein complex non-core subunit NAF1 K14763 NAF1; H/ACA ribonucleoprotein complex non-core subunit NAF1 D 103386264 shq1; protein SHQ1 homolog isoform X1 K14764 SHQ1; protein SHQ1 B 90S particles C U3 small nucleolar RNA-associated proteins D 103396131 imp3; U3 small nucleolar ribonucleoprotein protein IMP3 K14560 IMP3; U3 small nucleolar ribonucleoprotein protein IMP3 D 103397572 imp4; U3 small nucleolar ribonucleoprotein protein IMP4 isoform X1 K14561 IMP4; U3 small nucleolar ribonucleoprotein protein IMP4 D 103378708 mphosph10; U3 small nucleolar ribonucleoprotein protein MPP10 K14559 MPP10; U3 small nucleolar RNA-associated protein MPP10 D 103376923 ngdn; neuroguidin K14765 NGDN; U3 small nucleolar ribonucleoprotein protein LCP5 D 103393373 rrp7a; ribosomal RNA-processing protein 7 homolog A K14545 RRP7; ribosomal RNA-processing protein 7 D 103389228 periodic tryptophan protein 2 homolog K14558 PWP2; periodic tryptophan protein 2 D 103390285 nop14; nucleolar protein 14 K14766 NOP14; nucleolar protein 14 D 103385674 utp3; LOW QUALITY PROTEIN: something about silencing protein 10 K14767 UTP3; U3 small nucleolar RNA-associated protein 3 D 103379755 utp4; U3 small nucleolar RNA-associated protein 4 homolog K14548 UTP4; U3 small nucleolar RNA-associated protein 4 D 103383818 wdr43; WD repeat-containing protein 43 K14546 UTP5; U3 small nucleolar RNA-associated protein 5 D 103384153 utp6; LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 6 homolog K14557 UTP6; U3 small nucleolar RNA-associated protein 6 D 103385520 wdr46; WD repeat-containing protein 46 K14768 UTP7; U3 small nucleolar RNA-associated protein 7 D 103382238 heatr1; HEAT repeat-containing protein 1 K14550 UTP10; U3 small nucleolar RNA-associated protein 10 D 103387911 utp11; probable U3 small nucleolar RNA-associated protein 11 K14769 UTP11; U3 small nucleolar RNA-associated protein 11 D 103392001 wdr3; WD repeat-containing protein 3 isoform X1 K14556 DIP2; U3 small nucleolar RNA-associated protein 12 D 103393089 tbl3; transducin beta-like protein 3 K14555 UTP13; U3 small nucleolar RNA-associated protein 13 D 103395722 U3 small nucleolar RNA-associated protein 14 homolog A-like K14567 UTP14; U3 small nucleolar RNA-associated protein 14 D 103397750 utp15; U3 small nucleolar RNA-associated protein 15 homolog K14549 UTP15; U3 small nucleolar RNA-associated protein 15 D 103392404 wdr75; LOW QUALITY PROTEIN: WD repeat-containing protein 75 K14552 NAN1; NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17) D 103393411 utp18; U3 small nucleolar RNA-associated protein 18 homolog K14553 UTP18; U3 small nucleolar RNA-associated protein 18 D 103389402 noc4l; nucleolar complex protein 4 homolog K14771 NOC4; U3 small nucleolar RNA-associated protein 19 D 103382951 utp20; small subunit processome component 20 homolog K14772 UTP20; U3 small nucleolar RNA-associated protein 20 D 103390360 wdr36; WD repeat-containing protein 36 K14554 UTP21; U3 small nucleolar RNA-associated protein 21 D 103394053 utp23; rRNA-processing protein UTP23 homolog K14773 UTP23; U3 small nucleolar RNA-associated protein 23 D 103376664 fcf1; rRNA-processing protein FCF1 homolog K14566 UTP24; U3 small nucleolar RNA-associated protein 24 D 103383636 diexf; digestive organ expansion factor homolog K14774 UTP25; U3 small nucleolar RNA-associated protein 25 D 103382091 rsl1d1; ribosomal L1 domain-containing protein 1 K14775 UTP30; ribosome biogenesis protein UTP30 C Helicases D 103399839 ddx10; probable ATP-dependent RNA helicase DDX10 K14776 DDX10; ATP-dependent RNA helicase DDX10/DBP4 [EC:5.6.2.7] D 103392346 ddx18; ATP-dependent RNA helicase DDX18 isoform X2 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 103393391 ddx47; probable ATP-dependent RNA helicase DDX47 isoform X1 K14777 DDX47; ATP-dependent RNA helicase DDX47/RRP3 [EC:5.6.2.7] D 103394668 ddx49; probable ATP-dependent RNA helicase DDX49 K14778 DDX49; ATP-dependent RNA helicase DDX49/DBP8 [EC:5.6.2.7] D 103395120 ddx52; probable ATP-dependent RNA helicase DDX52 isoform X1 K14779 DDX52; ATP-dependent RNA helicase DDX52/ROK1 [EC:5.6.2.7] D 103383656 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 103390531 dhx15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1 K12820 DHX15; pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6] D 103397776 dhx37; probable ATP-dependent RNA helicase DHX37 K14780 DHX37; ATP-dependent RNA helicase DHX37/DHR1 [EC:5.6.2.6] D 103383295 eif4a3; eukaryotic initiation factor 4A-III K13025 EIF4A3; ATP-dependent RNA helicase [EC:5.6.2.7] C GTPase D 103382225 bms1; ribosome biogenesis protein BMS1 homolog K14569 BMS1; ribosome biogenesis protein BMS1 C RNase D 103377489 drosha; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] D 103382002 rexo4; RNA exonuclease 4 K18327 REXO4; RNA exonuclease 4 [EC:3.1.-.-] D 103391562 dbr1; lariat debranching enzyme K18328 DBR1; lariat debranching enzyme [EC:3.1.-.-] C Kinase D 103378870 casein kinase II subunit alpha'-like K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 103379463 csnk2a2; casein kinase II subunit alpha' K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 103388495 casein kinase II subunit alpha K03097 CSNK2A; casein kinase II subunit alpha [EC:2.7.11.1] D 103394065 casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta D 103388489 casein kinase II subunit beta K03115 CSNK2B; casein kinase II subunit beta C Other 90S particles D 103398736 aatf; protein AATF K14782 AATF; protein AATF/BFR2 D 103391784 cmss1; protein CMSS1 K14784 CMS1; protein CMS1 D 103387936 emg1; ribosomal RNA small subunit methyltransferase NEP1 K14568 EMG1; rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260] D 103384371 abt1; activator of basal transcription 1 K14785 ESF2; ESF2/ABP1 family protein D 103393690 kri1; protein KRI1 homolog K14786 KRI1; protein KRI1 D 103383050 krr1; LOW QUALITY PROTEIN: KRR1 small subunit processome component homolog K06961 KRR1; ribosomal RNA assembly protein D 103397298 rbm19; probable RNA-binding protein 19 isoform X1 K14787 MRD1; multiple RNA-binding domain-containing protein 1 D 103380436 nat10; RNA cytidine acetyltransferase K14521 NAT10; N-acetyltransferase 10 [EC:2.3.1.-] D 103396116 nucleolin-like K11294 NCL; nucleolin D 103394066 ncl; nucleolin isoform X1 K11294 NCL; nucleolin D 103384419 nol10; nucleolar protein 10 K14788 NOL10; ribosome biogenesis protein ENP2 D 103396205 nop9; nucleolar protein 9 K14790 NOP9; nucleolar protein 9 D 103398685 pinx1; PIN2/TERF1-interacting telomerase inhibitor 1 K11135 PINX1; Pin2-interacting protein X1 D 103382822 pwp1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 103389214 rcl1; RNA 3'-terminal phosphate cyclase-like protein isoform X1 K11108 RCL1; RNA 3'-terminal phosphate cyclase-like protein D 103384009 pdcd11; protein RRP5 homolog K14792 RRP5; rRNA biogenesis protein RRP5 D 103385745 rrp9; U3 small nucleolar RNA-interacting protein 2 isoform X1 K14793 RRP9; ribosomal RNA-processing protein 9 D 103387368 rrp12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 103383376 rrp36; ribosomal RNA processing protein 36 homolog K14795 RRP36; ribosomal RNA-processing protein 36 D 103388918 dcaf13; DDB1- and CUL4-associated factor 13 K11806 DCAF13; DDB1- and CUL4-associated factor 13 B Pre-40S particles C Kinases D 103398740 riok1; LOW QUALITY PROTEIN: serine/threonine-protein kinase RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D 103398189 riok2; serine/threonine-protein kinase RIO2 K07179 RIOK2; RIO kinase 2 [EC:2.7.11.1] C Export and cytoplasmic maturation factors D 103398286 dimt1; probable dimethyladenosine transferase K14191 DIM1; 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183] D 103378468 wbscr22; probable 18S rRNA (guanine-N(7))-methyltransferase K19306 BUD23; 18S rRNA (guanine1575-N7)-methyltransferase [EC:2.1.1.309] D 103392107 mettl5; methyltransferase-like protein 5 K24418 METTL5; rRNA N6-adenosine-methyltransferase METTL5 D 103385884 bysl; bystin isoform X1 K14797 ENP1; essential nuclear protein 1 D 103383888 ltv1; LOW QUALITY PROTEIN: protein LTV1 homolog K14798 LTV1; protein LTV1 D 103378599 nob1; RNA-binding protein NOB1 K11883 NOB1; RNA-binding protein NOB1 D 103386872 pno1; RNA-binding protein PNO1 K11884 PNO1; RNA-binding protein PNO1 D 103390946 ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 103397381 ak6; adenylate kinase isoenzyme 6 K18532 AK6; adenylate kinase [EC:2.7.4.3] D 103378242 tsr1; pre-rRNA-processing protein TSR1 homolog K14799 TSR1; pre-rRNA-processing protein TSR1 D 103384372 tsr2; pre-rRNA-processing protein TSR2 homolog K14800 TSR2; pre-rRNA-processing protein TSR2 D 103381713 tsr3; ribosome biogenesis protein TSR3 homolog K09140 TSR3; rRNA small subunit aminocarboxypropyltransferase [EC:2.5.1.157] D 103379259 pdcd2; programmed cell death protein 2 K14801 TSR4; pre-rRNA-processing protein TSR4 D 103379766 pdcd2l; LOW QUALITY PROTEIN: programmed cell death protein 2-like K14801 TSR4; pre-rRNA-processing protein TSR4 D 103383415 rps19bp1; active regulator of SIRT1 K26536 RPS19BP1; active regulator of SIRT1 D 103386966 xpo1; LOW QUALITY PROTEIN: exportin-1 K14290 XPO1; exportin-1 D 103393412 kpnb1; importin subunit beta-1 isoform X2 K14293 KPNB1; importin subunit beta-1 D 103389990 tnpo1; transportin-1 isoform X1 K18752 TNPO1; transportin-1 D 103376941 ipo4; importin-4 K20221 IPO4; importin-4 D 103389334 ipo5; importin-5 K20222 IPO5; importin-5 D 103379269 ipo7; importin-7 K20223 IPO7; importin-7 D 103386689 ipo9; importin-9 K20224 IPO9; importin-9 C Other pre-40S particles D 103377244 atp8a2; phospholipid-transporting ATPase IB isoform X2 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 103390601 atp8a1; phospholipid-transporting ATPase IA isoform X4 K14802 DRS2; phospholipid-transporting ATPase [EC:7.6.2.1] D 103378769 eif3j; eukaryotic translation initiation factor 3 subunit J K03245 EIF3J; translation initiation factor 3 subunit J D 103389997 abce1; ATP-binding cassette sub-family E member 1 K06174 ABCE1; ATP-binding cassette, sub-family E, member 1 B Pre-60S particles C Helicases D 103383782 probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 103393708 probable ATP-dependent RNA helicase DDX5 isoform X1 K12823 DDX5; ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7] D 103392346 ddx18; ATP-dependent RNA helicase DDX18 isoform X2 K13179 DDX18; ATP-dependent RNA helicase DDX18/HAS1 [EC:5.6.2.7] D 103379124 ddx21; nucleolar RNA helicase 2 K16911 DDX21; ATP-dependent RNA helicase DDX21 [EC:5.6.2.7] D 103377290 ddx24; ATP-dependent RNA helicase DDX24 isoform X1 K14805 DDX24; ATP-dependent RNA helicase DDX24/MAK5 [EC:5.6.2.7] D 103386814 ddx27; probable ATP-dependent RNA helicase DDX27 K13181 DDX27; ATP-dependent RNA helicase DDX27 [EC:5.6.2.7] D 103397965 ddx31; probable ATP-dependent RNA helicase DDX31 isoform X1 K14806 DDX31; ATP-dependent RNA helicase DDX31/DBP7 [EC:5.6.2.7] D 103380611 ddx51; ATP-dependent RNA helicase DDX51 K14807 DDX51; ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7] D 103390176 ddx54; ATP-dependent RNA helicase DDX54 K14808 DDX54; ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7] D 103389966 ddx55; ATP-dependent RNA helicase DDX55 K14809 DDX55; ATP-dependent RNA helicase DDX55/SPB4 [EC:5.6.2.7] D 103389660 ddx56; probable ATP-dependent RNA helicase DDX56 K14810 DDX56; ATP-dependent RNA helicase DDX56/DBP9 [EC:5.6.2.7] D 103390251 skiv2l2; superkiller viralicidic activity 2-like 2 K12598 MTR4; ATP-dependent RNA helicase DOB1 [EC:5.6.2.6] C GTPases D 103386143 gnl3; guanine nucleotide-binding protein-like 3 K14538 NUG1; nuclear GTP-binding protein D 103386413 gnl3l; guanine nucleotide-binding protein-like 3-like protein K14538 NUG1; nuclear GTP-binding protein D 103387908 gnl2; nucleolar GTP-binding protein 2 isoform X1 K14537 NUG2; nuclear GTP-binding protein D 103396823 gtpbp4; nucleolar GTP-binding protein 1 K06943 NOG1; nucleolar GTP-binding protein D 103392401 lsg1; large subunit GTPase 1 homolog K14539 LSG1; large subunit GTPase 1 [EC:3.6.1.-] D 103378900 efl1; elongation factor-like GTPase 1 K14536 RIA1; ribosome assembly protein 1 [EC:3.6.5.-] C RNases D 103395696 rexo2; oligoribonuclease, mitochondrial K13288 orn; oligoribonuclease [EC:3.1.-.-] D 103383459 putative RNA exonuclease NEF-sp K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 103397217 LOW QUALITY PROTEIN: RNA exonuclease 1 homolog K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 103397606 RNA exonuclease 1 homolog isoform X1 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 103394957 rexo1; RNA exonuclease 1 homolog isoform X2 K14570 REX1; RNA exonuclease [EC:3.1.-.-] D 103396659 xrn1; LOW QUALITY PROTEIN: 5'-3' exoribonuclease 1 K12618 XRN1; 5'-3' exoribonuclease 1 [EC:3.1.13.-] D 103381319 xrn2; LOW QUALITY PROTEIN: 5'-3' exoribonuclease 2 K12619 XRN2; 5'-3' exoribonuclease 2 [EC:3.1.13.-] D RNase MRP E 103388647 pop1; ribonucleases P/MRP protein subunit POP1 K01164 POP1; ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5] E 103387800 pop4; ribonuclease P protein subunit p29 K03538 POP4; ribonuclease P protein subunit POP4 [EC:3.1.26.5] E 103396928 ribonuclease P/MRP protein subunit POP5-like K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 103398100 pop5; ribonuclease P/MRP protein subunit POP5 K03537 POP5; ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5] E 103382269 rpp30; ribonuclease P protein subunit p30 K03539 RPP1; ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5] E 103391095 pop7; ribonuclease P protein subunit p20 K14527 RPP20; ribonuclease P/MRP protein subunit RPP20 [EC:3.1.26.5] E 103378985 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 103388092 ribonuclease P protein subunit p25-like protein K14525 RPP25; ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5] E 103388180 rpp38; ribonuclease P protein subunit p38 K14523 RPP38; ribonucleases P/MRP protein subunit RPP38 [EC:3.1.26.5] E 103398741 rpp40; ribonuclease P protein subunit p40 isoform X1 K14530 RPP40; ribonucleases P/MRP protein subunit RPP40 [EC:3.1.26.5] C Kinases D 103385297 nol9; polynucleotide 5'-hydroxyl-kinase NOL9 K06947 GRC3; polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-] C Export and cytoplasmic maturation factors D 103377403 abcf2; ATP-binding cassette sub-family F member 2 isoform X2 K06185 ABCF2; ATP-binding cassette, subfamily F, member 2 D 103390276 dnajc21; LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 21 K09506 DNAJA5; DnaJ homolog subfamily A member 5 D 103386751 eif6; eukaryotic translation initiation factor 6 K03264 EIF6; translation initiation factor 6 D 103378288 heat shock cognate 70 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 103388515 heat shock cognate 71 kDa protein-like K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 103395051 LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 103395053 heat shock cognate 70 kDa protein K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 103393458 heat shock 70 kDa protein 1 K03283 HSPA1_6_8; heat shock 70kDa protein 1/6/8 D 103385624 mrto4; mRNA turnover protein 4 homolog K14815 MRT4; mRNA turnover protein 4 D 103378489 nmd3; 60S ribosomal export protein NMD3 K07562 NMD3; 60S ribosomal export protein NMD3 D 103390831 nxf1; nuclear RNA export factor 1 isoform X1 K14284 NXF; nuclear RNA export factor D 103391379 nxt2; NTF2-related export protein 2 isoform X1 K14285 NXT1_2; NTF2-related export protein 1/2 D 103390946 ran; GTP-binding nuclear protein Ran K07936 RAN; GTP-binding nuclear protein Ran D 103396827 znf622; zinc finger protein 622 K14816 REI1; pre-60S factor REI1 D 103377867 sbds; ribosome maturation protein SBDS K14574 SDO1; ribosome maturation protein SDO1 D 103390713 spata5; spermatogenesis-associated protein 5 K14575 AFG2; AAA family ATPase D 103379095 spata5l1; spermatogenesis-associated protein 5-like protein 1 K26051 SPATA5L1; ribosome biogenesis protein SPATA5L1 [EC:3.6.4.10] D 103382328 cinp; cyclin-dependent kinase 2-interacting protein K26052 CINP; cyclin-dependent kinase 2-interacting protein D 103394002 uncharacterized protein C1orf109 homolog K26053 C1ORF109; ribosome biogenesis protein C1orf109 D 103386966 xpo1; LOW QUALITY PROTEIN: exportin-1 K14290 XPO1; exportin-1 D 103393412 kpnb1; importin subunit beta-1 isoform X2 K14293 KPNB1; importin subunit beta-1 D 103389990 tnpo1; transportin-1 isoform X1 K18752 TNPO1; transportin-1 D 103376941 ipo4; importin-4 K20221 IPO4; importin-4 D 103389334 ipo5; importin-5 K20222 IPO5; importin-5 D 103379269 ipo7; importin-7 K20223 IPO7; importin-7 D 103386689 ipo9; importin-9 K20224 IPO9; importin-9 D 103396558 dusp12; dual specificity protein phosphatase 12 K14819 DUSP12; dual specificity phosphatase 12 [EC:3.1.3.16 3.1.3.48] C 5-FMC complex D 103388149 tex10; testis-expressed sequence 10 protein isoform X1 K14827 IPI1; pre-rRNA-processing protein IPI1 D 103398393 wdr18; WD repeat-containing protein 18 K14829 IPI3; pre-rRNA-processing protein IPI3 D 103384723 las1l; ribosomal biogenesis protein LAS1L K16912 LAS1; ribosomal biogenesis protein LAS1 D 103392119 pelp1; LOW QUALITY PROTEIN: proline-, glutamic acid- and leucine-rich protein 1 K16913 PELP1; proline-, glutamic acid- and leucine-rich protein 1 D 103391815 senp3; sentrin-specific protease 3 isoform X1 K08593 SENP3; sentrin-specific protease 3 [EC:3.4.22.68] C Ribosome quality control proteins D 103395103 ltn1; E3 ubiquitin-protein ligase listerin K22377 LTN1; E3 ubiquitin-protein ligase listerin [EC:2.3.2.27] D 103379177 tcf25; transcription factor 25 isoform X1 K24970 TCF25; transcription factor 25 D 103379519 nemf; nuclear export mediator factor NEMF K24971 NEMF; nuclear export mediator factor NEMF D 103398200 transitional endoplasmic reticulum ATPase K13525 VCP; transitional endoplasmic reticulum ATPase D 103397105 transitional endoplasmic reticulum ATPase-like K13525 VCP; transitional endoplasmic reticulum ATPase D 103382213 nploc4; nuclear protein localization protein 4 homolog K14015 NPLOC4; nuclear protein localization protein 4 D 103397774 ufd1l; ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1 D 103398999 ubiquitin fusion degradation protein 1 homolog K14016 UFD1; ubiquitin fusion degradation protein 1 D 103399259 putative peptidyl-tRNA hydrolase PTRHD1 K05969 PTRHD1; peptidyl-tRNA hydrolase PTRHD1 [EC:3.1.1.29] D 103392197 ankzf1; ankyrin repeat and zinc finger domain-containing protein 1 K26089 ANKZF1; ankyrin repeat and zinc finger domain-containing protein 1 C Other pre-60S particles D 103390275 brix1; ribosome biogenesis protein BRX1 homolog K14820 BRX1; ribosome biogenesis protein BRX1 D 103378213 znf593; zinc finger protein 593 K14821 BUD20; bud site selection protein 20 D 103383514 ccdc86; coiled-coil domain-containing protein 86 K14822 CGR1; rRNA-processing protein CGR1 D 103396061 ebna1bp2; probable rRNA-processing protein EBP2 K14823 EBP2; rRNA-processing protein EBP2 D 103393759 bop1; ribosome biogenesis protein BOP1 K14824 ERB1; ribosome biogenesis protein ERB1 D 103376661 tmed5; transmembrane emp24 domain-containing protein 5 K14825 TMED5; p24 family protein gamma-2 D 103396685 pak1ip1; p21-activated protein kinase-interacting protein 1 K14830 MAK11; protein MAK11 D 103398012 mak16; protein MAK16 homolog K14831 MAK16; protein MAK16 D 103381320 cebpz; CCAAT/enhancer-binding protein zeta K14832 MAK21; ribosome biogenesis protein MAK21 D 103380696 mdn1; midasin K14572 MDN1; midasin D 103398549 nip7; 60S ribosome subunit biogenesis protein NIP7 homolog K07565 NIP7; 60S ribosome subunit biogenesis protein NIP7 D 103385049 noc2l; nucleolar complex protein 2 homolog K14833 NOC2; nucleolar complex protein 2 D 103382304 noc3l; nucleolar complex protein 3 homolog K14834 NOC3; nucleolar complex protein 3 D 103387937 nop2; probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase K14835 NOP2; 25S rRNA (cytosine2870-C5)-methyltransferase [EC:2.1.1.310] D 103380096 rbm28; RNA-binding protein 28 K14573 NOP4; nucleolar protein 4 D 103386444 nol8; nucleolar protein 8 K14836 NOP8; nucleolar protein 8 D 103383370 RNA-binding protein 34-like K14837 NOP12; nucleolar protein 12 D 103383372 RNA-binding protein 34-like K14837 NOP12; nucleolar protein 12 D 103399136 RNA-binding protein 34-like K14837 NOP12; nucleolar protein 12 D 103392348 nifk; MKI67 FHA domain-interacting nucleolar phosphoprotein K14838 NOP15; nucleolar protein 15 D 103378258 gltscr2; glioma tumor suppressor candidate region gene 2 protein K14840 NOP53; nucleolar protein 53 D 103378340 wdr74; WD repeat-containing protein 74 K14841 NSA1; ribosome biogenesis protein NSA1 D 103390002 nsa2; ribosome biogenesis protein NSA2 homolog K14842 NSA2; ribosome biogenesis protein NSA2 D 103397304 pes1; pescadillo homolog K14843 PES1; pescadillo D 103389302 pum3; pumilio homolog 3 K14844 PUF6; pumilio homology domain family member 6 D 103382822 pwp1; periodic tryptophan protein 1 homolog K14791 PWP1; periodic tryptophan protein 1 D 103393023 dxo; decapping and exoribonuclease protein K14845 RAI1; RAT1-interacting protein D 103381232 c7h14orf169; bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66 isoform X1 K16914 RIOX1; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine4/36 demethylase [EC:1.14.11.79 1.14.11.67 1.14.11.69] D 103395706 mina; LOW QUALITY PROTEIN: bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA K21760 RIOX2; protein-L-histidine (3S)-3-hydroxylase / [histone H3]-trimethyl-L-lysine9 demethylase [EC:1.14.11.79 1.14.11.66] D 103387772 nvl; nuclear valosin-containing protein-like K14571 RIX7; ribosome biogenesis ATPase D 103392274 rpf1; ribosome production factor 1 K14846 RPF1; ribosome production factor 1 D 103380593 rpf2; ribosome production factor 2 homolog K14847 RPF2; ribosome production factor 2 D 103387848 grwd1; glutamate-rich WD repeat-containing protein 1 K14848 RRB1; ribosome assembly protein RRB1 D 103391498 rrp1; ribosomal RNA processing protein 1 homolog A isoform X1 K14849 RRP1; ribosomal RNA-processing protein 1 D 103378042 rrp8; LOW QUALITY PROTEIN: ribosomal RNA-processing protein 8 K14850 RRP8; ribosomal RNA-processing protein 8 [EC:2.1.1.287] D 103387368 rrp12; RRP12-like protein K14794 RRP12; ribosomal RNA-processing protein 12 D 103393365 nol12; nucleolar protein 12 K14851 RRP17; ribosomal RNA-processing protein 17 D 103377127 rrs1; ribosome biogenesis regulatory protein homolog K14852 RRS1; regulator of ribosome biosynthesis D 103395112 nle1; notchless protein homolog 1 K14855 RSA4; ribosome assembly protein 4 D 103390255 sdad1; protein SDA1 homolog K14856 SDA1; protein SDA1 D 103393119 ftsj3; pre-rRNA processing protein FTSJ3 K14857 SPB1; AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-] D 103392573 suppressor of SWI4 1 homolog K14859 SSF1_2; ribosome biogenesis protein SSF1/2 D 103383634 tma16; translation machinery-associated protein 16 K14860 TMA16; translation machinery-associated protein 16 D 103378216 urb1; nucleolar pre-ribosomal-associated protein 1 K14861 URB1; nucleolar pre-ribosomal-associated protein 1 D 103378613 urb2; unhealthy ribosome biogenesis protein 2 homolog K14862 URB2; nucleolar pre-ribosomal-associated protein 2 D 103389455 wdr12; ribosome biogenesis protein WDR12 K14863 WDR12; ribosome biogenesis protein D 103389456 nufip1; nuclear fragile X mental retardation-interacting protein 1 isoform X1 K23308 NUFIP1; nuclear fragile X mental retardation-interacting protein 1 D 103394914 znhit3; zinc finger HIT domain-containing protein 3 K23309 ZNHIT3; zinc finger HIT domain-containing protein 3 B Other ribosome biogenesis factors C 103381649 bccip; BRCA2 and CDKN1A-interacting protein K15262 BCP1; protein BCP1 C 103386300 lyar; cell growth-regulating nucleolar protein isoform X1 K15263 LYER; cell growth-regulating nucleolar protein C 103395852 nsun4; 5-methylcytosine rRNA methyltransferase NSUN4 isoform X1 K21970 NSUN4; 5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-] C 103384520 nsun5; probable 28S rRNA (cytosine-C(5))-methyltransferase K15264 NSUN5; 25S rRNA (cytosine2278-C5)-methyltransferase [EC:2.1.1.311] C 103383511 tfb1m; dimethyladenosine transferase 1, mitochondrial K15266 TFB1M; dimethyladenosine transferase 1, mitochondrial [EC:2.1.1.-] C 103381889 mrm1; rRNA methyltransferase 1, mitochondrial K15507 MRM1; 21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-] C 103379960 bmt2; probable methyltransferase BTM2 homolog isoform X1 K18849 BMT2; 25S rRNA (adenine2142-N1)-methyltransferase [EC:2.1.1.286] C 103378301 mrm3; rRNA methyltransferase 3, mitochondrial K20095 RNMTL1; 16S rRNA (guanosine(1370)-2'-O)-methyltransferase [EC:2.1.1.-] C 103388801 zcchc4; zinc finger CCHC domain-containing protein 4 K25177 ZCCHC4; rRNA N6-adenosine-methyltransferase ZCCHC4 [EC:2.1.1.-] C 103379361 ddx28; probable ATP-dependent RNA helicase DDX28 K20096 DDX28; ATP-dependent RNA helicase DDX28 [EC:5.6.2.7] C 103395186 dhx33; putative ATP-dependent RNA helicase DHX33 K17820 DHX33; ATP-dependent RNA helicase DHX33 [EC:5.6.2.6] C 103380260 ighmbp2; DNA-binding protein SMUBP-2 K19036 IGHMBP2; ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] C 103388074 isg20l2; interferon-stimulated 20 kDa exonuclease-like 2 K18329 ISG20L2; interferon-stimulated 20 kDa exonuclease-like 2 [EC:3.1.-.-] C 103392783 kdm8; lysine-specific demethylase 8 K10277 KDM8; [protein]-arginine 3-hydroxylase / protease [EC:1.14.11.73 3.4.-.-] C 103391772 PHD finger protein 6-like K23310 PHF6; PHD finger protein 6 C 103391283 phf6; PHD finger protein 6 K23310 PHF6; PHD finger protein 6 C 103394899 eral1; GTPase Era, mitochondrial K03595 era; GTPase C 103382425 c8h12orf45; uncharacterized protein C12orf45 homolog K26142 NOPCHAP1; NOP protein chaperone 1 C 103385095 proliferation-associated protein 2G4-like K26736 PA2G4; ERBB-3 binding protein C 103385946 proliferation-associated protein 2G4-like K26736 PA2G4; ERBB-3 binding protein C 103387347 mtg1; mitochondrial ribosome-associated GTPase 1 K19828 MTG1; mitochondrial GTPase 1 C 103385431 mtg2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] C 103390792 noa1; nitric oxide-associated protein 1 K19832 NOA1; nitric oxide-associated protein 1 # AProkaryotic type B Sno RNPs C Box C/D snoRNPs D 103386235 nop56; nucleolar protein 56 K14564 NOP56; nucleolar protein 56 D 103390086 rpl7a; 60S ribosomal protein L7a K02936 RP-L7Ae; large subunit ribosomal protein L7Ae C Box H/ACA snoRNPs D 103382349 dkc1; H/ACA ribonucleoprotein complex subunit 4 K11131 DKC1; H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] D 103384695 nop10; H/ACA ribonucleoprotein complex subunit 3 K11130 NOP10; H/ACA ribonucleoprotein complex subunit 3 B rRNA transcription factors B rRNA modification factors C 16S rRNA modification factors C 23S rRNA modification factors D 103392619 mrm2; rRNA methyltransferase 2, mitochondrial isoform X2 K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] B ribosomal protein modification factors B rRNA processing factors C 103377489 drosha; ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] B rRNA helicases B GTPases C 103394899 eral1; GTPase Era, mitochondrial K03595 era; GTPase C 103385431 mtg2; mitochondrial ribosome-associated GTPase 2 K03979 obgE; GTPase [EC:3.6.5.-] B Other maturation factors C 103387894 yrdC domain-containing protein, mitochondrial K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024