+D GENES KO #

  KEGG Orthology (KO) - Chlamydia trachomatis RC-J/966

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A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:ctmj00010] D CTRC966_01975 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTRC966_01065 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTRC966_01075 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CTRC966_01115 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CTRC966_01695 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTRC966_02670 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTRC966_03665 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CTRC966_03820 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTRC966_03085 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTRC966_01720 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTRC966_01270 pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CTRC966_01275 pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CTRC966_01280 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTRC966_03755 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:ctmj00020] D CTRC966_00295 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CTRC966_00300 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTRC966_02085 branched-chain alpha-keto acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTRC966_04390 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D CTRC966_04385 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CTRC966_03110 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTRC966_03105 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CTRC966_03115 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CTRC966_01965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTRC966_03755 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D CTRC966_01270 pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CTRC966_01275 pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CTRC966_01280 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] C 00030 Pentose phosphate pathway [PATH:ctmj00030] D CTRC966_01975 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTRC966_00965 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTRC966_00970 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D CTRC966_00340 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CTRC966_00640 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D CTRC966_03980 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D CTRC966_01610 transaldolase B K00616 TALDO1; transaldolase [EC:2.2.1.2] D CTRC966_01105 ribose-5-phosphate isomerase A K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D CTRC966_01115 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CTRC966_01065 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTRC966_01075 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] C 00040 Pentose and glucuronate interconversions D CTRC966_00640 ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] C 00051 Fructose and mannose metabolism [PATH:ctmj00051] D CTRC966_01525 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTRC966_01065 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTRC966_01075 diphosphate--fructose-6-phosphate 1-phosphotransferase K00895 pfp; diphosphate-dependent phosphofructokinase [EC:2.7.1.90] D CTRC966_01115 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CTRC966_01695 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] C 00052 Galactose metabolism D CTRC966_01065 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] C 00053 Ascorbate and aldarate metabolism C 00500 Starch and sucrose metabolism [PATH:ctmj00500] D CTRC966_02585 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D CTRC966_04240 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] D CTRC966_04655 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CTRC966_01285 glycogen phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D CTRC966_00460 4-alpha-glucanotransferase K00705 malQ; 4-alpha-glucanotransferase [EC:2.4.1.25] D CTRC966_00225 putative glycosyl hydrolase K01214 ISA; isoamylase [EC:3.2.1.68] D CTRC966_01975 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ctmj00520] D CTRC966_04355 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTRC966_04350 glmM; phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D CTRC966_03315 glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D CTRC966_03780 UDP-N-acetylglucosamine pyrophosphorylase K00972 UAP1; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83] D CTRC966_02395 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTRC966_04435 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTRC966_01975 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTRC966_01525 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTRC966_02585 glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:ctmj00620] D CTRC966_01270 pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CTRC966_01275 pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CTRC966_01280 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTRC966_01720 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTRC966_01375 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CTRC966_00650 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CTRC966_00655 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CTRC966_01515 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CTRC966_01965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTRC966_03755 phosphoenolpyruvate carboxykinase K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ctmj00630] D CTRC966_01965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTRC966_02260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTRC966_01460 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00640 Propanoate metabolism [PATH:ctmj00640] D CTRC966_01765 2-oxoisovalerate dehydrogenase alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTRC966_01375 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CTRC966_00650 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CTRC966_00655 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CTRC966_01515 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CTRC966_04385 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CTRC966_04390 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00650 Butanoate metabolism D CTRC966_03110 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTRC966_03105 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CTRC966_03115 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit C 00660 C5-Branched dibasic acid metabolism D CTRC966_04385 sucC; succinyl-CoA synthetase subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D CTRC966_04390 succinyl-CoA synthetase subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] C 00562 Inositol phosphate metabolism D CTRC966_01695 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:ctmj00190] D CTRC966_03110 sdhA; succinate dehydrogenase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D CTRC966_03105 sdhB; succinate dehydrogenase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D CTRC966_03115 succinate dehydrogenase cytochrome b558 subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit D CTRC966_00075 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CTRC966_00080 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] D CTRC966_01585 V-type ATP synthase subunit A K02117 ATPVA; V/A-type H+/Na+-transporting ATPase subunit A [EC:7.1.2.2 7.2.2.1] D CTRC966_01580 V-type ATP synthase subunit B K02118 ATPVB; V/A-type H+/Na+-transporting ATPase subunit B D CTRC966_01575 V-type ATP synthase subunit D K02120 ATPVD; V/A-type H+/Na+-transporting ATPase subunit D D CTRC966_01595 V-type ATP synthase subunit E K02121 ATPVE; V/A-type H+/Na+-transporting ATPase subunit E D CTRC966_01570 V-type ATP synthase subunit I K02123 ATPVI; V/A-type H+/Na+-transporting ATPase subunit I D CTRC966_01565 V-type ATP synthase subunit K K02124 ATPVK; V/A-type H+/Na+-transporting ATPase subunit K D CTRC966_04095 inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:ctmj00680] D CTRC966_02260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTRC966_03085 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTRC966_01965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D CTRC966_01115 fructose-bisphosphate aldolase K11645 fbaB; fructose-bisphosphate aldolase, class I [EC:4.1.2.13] D CTRC966_01065 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTRC966_03820 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 00910 Nitrogen metabolism C 00920 Sulfur metabolism [PATH:ctmj00920] D CTRC966_04110 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CTRC966_02280 putative oxidoreductase K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:ctmj00061] D CTRC966_01375 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D CTRC966_00650 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D CTRC966_00655 acetyl-CoA carboxylase biotin carboxylase subunit K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D CTRC966_01515 acetyl-CoA carboxylase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D CTRC966_01225 acpP; acyl carrier protein K02078 acpP; acyl carrier protein D CTRC966_01235 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CTRC966_01240 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CTRC966_04085 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CTRC966_01230 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTRC966_02805 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CTRC966_00545 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00062 Fatty acid elongation C 00071 Fatty acid degradation C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:ctmj00561] D CTRC966_04290 glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CTRC966_04315 putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CTRC966_04115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTRC966_02385 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 00564 Glycerophospholipid metabolism [PATH:ctmj00564] D CTRC966_03775 gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D CTRC966_04290 glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CTRC966_04115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTRC966_02385 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTRC966_02375 phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D CTRC966_04410 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CTRC966_03695 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D CTRC966_04235 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] D CTRC966_02620 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995 pgsA; CDP-diacylglycerol---glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] C 00565 Ether lipid metabolism C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism C 00591 Linoleic acid metabolism C 00592 alpha-Linolenic acid metabolism C 01040 Biosynthesis of unsaturated fatty acids B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:ctmj00230] D CTRC966_01130 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CTRC966_00305 multicopper polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CTRC966_02645 ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CTRC966_03190 dITP/XTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D CTRC966_00165 gmk; guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D CTRC966_04415 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTRC966_04420 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CTRC966_03985 AMP nucleosidase K01241 amn; AMP nucleosidase [EC:3.2.2.4] D CTRC966_00680 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00240 Pyrimidine metabolism [PATH:ctmj00240] D CTRC966_03585 pyrH; uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D CTRC966_02645 ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CTRC966_01815 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D CTRC966_00955 pyrG; CTP synthetase K01937 pyrG; CTP synthase [EC:6.3.4.2] D CTRC966_02380 cmk; cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25] D CTRC966_01130 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D CTRC966_00205 dcd; deoxycytidine triphosphate deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D CTRC966_04415 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTRC966_04420 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] D CTRC966_00980 tmk; thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D CTRC966_01510 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:ctmj00250] D CTRC966_03360 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CTRC966_04355 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] C 00260 Glycine, serine and threonine metabolism [PATH:ctmj00260] D CTRC966_01895 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTRC966_01900 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTRC966_02260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTRC966_03820 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTRC966_01460 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein D CTRC966_04410 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D CTRC966_00895 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CTRC966_00890 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:ctmj00270] D CTRC966_00305 multicopper polyphenol oxidase K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D CTRC966_01895 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTRC966_01900 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTRC966_03360 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CTRC966_01965 malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37] C 00280 Valine, leucine and isoleucine degradation [PATH:ctmj00280] D CTRC966_04105 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] D CTRC966_01765 2-oxoisovalerate dehydrogenase alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ctmj00290] D CTRC966_04105 leucine dehydrogenase K00263 E1.4.1.9; leucine dehydrogenase [EC:1.4.1.9] C 00300 Lysine biosynthesis [PATH:ctmj00300] D CTRC966_01895 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTRC966_01900 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTRC966_01890 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTRC966_01905 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D CTRC966_02250 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D CTRC966_02035 L,L-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CTRC966_01395 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTRC966_04015 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] C 00310 Lysine degradation [PATH:ctmj00310] D CTRC966_00300 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTRC966_02085 branched-chain alpha-keto acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00220 Arginine biosynthesis D CTRC966_03360 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00330 Arginine and proline metabolism [PATH:ctmj00330] D CTRC966_01950 hypothetical protein K02626 pdaD; arginine decarboxylase [EC:4.1.1.19] D CTRC966_03360 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00340 Histidine metabolism C 00350 Tyrosine metabolism D CTRC966_03360 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00360 Phenylalanine metabolism D CTRC966_03360 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00380 Tryptophan metabolism D CTRC966_00300 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTRC966_02085 branched-chain alpha-keto acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ctmj00400] D CTRC966_01995 3-deoxy-7-phosphoheptulonate synthase K03856 AROA2; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D CTRC966_01930 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D CTRC966_01935 aroDE; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] D CTRC966_01920 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D CTRC966_01915 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D CTRC966_01925 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D CTRC966_00895 tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D CTRC966_00890 tryptophan synthase subunit beta K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D CTRC966_03360 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism C 00430 Taurine and hypotaurine metabolism C 00440 Phosphonate and phosphinate metabolism D CTRC966_01985 metal-dependent hydrolase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55] C 00450 Selenocompound metabolism [PATH:ctmj00450] D CTRC966_03635 cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] D CTRC966_00520 thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D CTRC966_00175 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism D CTRC966_02260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:ctmj00470] D CTRC966_04045 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTRC966_04025 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTRC966_02250 dapF; diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] C 00480 Glutathione metabolism [PATH:ctmj00480] D CTRC966_00245 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CTRC966_00340 6-phosphogluconate dehydrogenase K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D CTRC966_00965 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:ctmj00540] D CTRC966_02800 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CTRC966_02810 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CTRC966_01260 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CTRC966_02145 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CTRC966_02100 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CTRC966_02080 carbohydrate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D CTRC966_03460 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CTRC966_00950 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CTRC966_01080 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CTRC966_00060 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ctmj00541] D CTRC966_01525 phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8] D CTRC966_03315 glucosamine-1-phosphate acetyltransferase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] C 00550 Peptidoglycan biosynthesis [PATH:ctmj00550] D CTRC966_02395 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTRC966_04435 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTRC966_04045 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTRC966_04025 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTRC966_01395 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTRC966_04015 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CTRC966_02365 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTRC966_04020 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTRC966_04040 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CTRC966_01400 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CTRC966_02900 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] C 00552 Teichoic acid biosynthesis C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:ctmj00730] D CTRC966_03815 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTRC966_01335 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTRC966_01715 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CTRC966_00680 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:ctmj00740] D CTRC966_03870 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CTRC966_03865 riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CTRC966_03875 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D CTRC966_02115 riboflavin synthase subunit alpha K00793 ribE; riboflavin synthase [EC:2.5.1.9] D CTRC966_00490 bifunctional riboflavin kinase/FMN adenylyltransferase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D CTRC966_01140 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism C 00760 Nicotinate and nicotinamide metabolism [PATH:ctmj00760] D CTRC966_01130 surE; 5'(3')-nucleotidase/polyphosphatase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] C 00770 Pantothenate and CoA biosynthesis [PATH:ctmj00770] D CTRC966_02600 coaE; dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D CTRC966_00525 acpS; 4'-phosphopantetheinyl transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] C 00780 Biotin metabolism [PATH:ctmj00780] D CTRC966_04085 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CTRC966_01230 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTRC966_02805 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CTRC966_00545 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CTRC966_04125 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CTRC966_03840 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:ctmj00785] D CTRC966_02935 lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D CTRC966_01475 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CTRC966_02640 lipoate-protein ligase A K03800 lplA; lipoate---protein ligase [EC:6.3.1.20] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTRC966_01270 pyruvate dehydrogenase E1 component alpha subunit K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] D CTRC966_01275 pyruvate dehydrogenase E1 component beta subunit K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] D CTRC966_01280 branched-chain alpha-keto acid dehydrogenase subunit E2 K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D CTRC966_00295 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D CTRC966_00300 dihydrolipoamide succinyltransferase K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTRC966_02085 branched-chain alpha-keto acid dehydrogenase subunit E2 K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D CTRC966_01765 2-oxoisovalerate dehydrogenase alpha subunit K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] D CTRC966_01460 glycine cleavage system protein H K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:ctmj00790] D CTRC966_03235 dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D CTRC966_03230 2-amino-4-hydroxy-6-hydroxymethyldihydropteridi ne pyrophosphokinase K13941 folKP; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15] D CTRC966_03225 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CTRC966_03220 hypothetical protein K22099 folC2; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D CTRC966_03870 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D CTRC966_01690 N-(5'-phosphoribosyl)anthranilate isomerase K22100 trpF; 2,5-diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one isomerase/dehydratase [EC:4.2.1.160] C 00670 One carbon pool by folate [PATH:ctmj00670] D CTRC966_03225 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D CTRC966_00420 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D CTRC966_02260 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D CTRC966_02795 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CTRC966_03420 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:ctmj00860] D CTRC966_02335 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTRC966_03500 hemA; glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D CTRC966_01090 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D CTRC966_03340 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CTRC966_01545 porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D CTRC966_02270 hemD; uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D CTRC966_03960 hemE; uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D CTRC966_03955 coproporphyrinogen III oxidase K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D CTRC966_03950 protoporphyrinogen oxidase K00231 PPOX; protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15] D CTRC966_02565 hemH; ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ctmj00130] D CTRC966_01135 ubiA; prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D CTRC966_01140 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CTRC966_02240 ubiE; ubiquinone/menaquinone biosynthesis methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D CTRC966_02230 hypothetical protein K18285 mqnE; aminodeoxyfutalosine synthase [EC:2.5.1.120] D CTRC966_04070 hypothetical protein K11784 mqnC; cyclic dehypoxanthinyl futalosine synthase [EC:1.21.98.1] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:ctmj00900] D CTRC966_01715 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D CTRC966_00385 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D CTRC966_02430 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D CTRC966_04270 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D CTRC966_02275 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D CTRC966_00310 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D CTRC966_04605 ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D CTRC966_01140 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D CTRC966_03310 dimethylallyltransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTRC966_02365 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D CTRC966_03980 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides C 01055 Biosynthesis of vancomycin group antibiotics B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis C 00261 Monobactam biosynthesis [PATH:ctmj00261] D CTRC966_01895 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D CTRC966_01900 aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D CTRC966_01890 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D CTRC966_01905 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis C 00524 Neomycin, kanamycin and gentamicin biosynthesis C 00525 Acarbose and validamycin biosynthesis C 00401 Novobiocin biosynthesis D CTRC966_03360 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis C 00333 Prodigiosin biosynthesis D CTRC966_01235 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CTRC966_01230 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTRC966_00545 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D CTRC966_01225 acpP; acyl carrier protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites D CTRC966_01935 aroDE; bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein K13832 aroDE; 3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation C 00627 Aminobenzoate degradation D CTRC966_00450 putative decarboxylase K16239 bsdC; 4-hydroxybenzoate decarboxylase subunit C [EC:4.1.1.61] D CTRC966_01140 aromatic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00364 Fluorobenzoate degradation C 00625 Chloroalkane and chloroalkene degradation C 00361 Chlorocyclohexane and chlorobenzene degradation C 00623 Toluene degradation C 00622 Xylene degradation C 00633 Nitrotoluene degradation C 00642 Ethylbenzene degradation C 00643 Styrene degradation C 00791 Atrazine degradation C 00930 Caprolactam degradation C 00363 Bisphenol degradation C 00621 Dioxin degradation C 00626 Naphthalene degradation C 00624 Polycyclic aromatic hydrocarbon degradation C 00365 Furfural degradation C 00984 Steroid degradation C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:ctmj03020] D CTRC966_01620 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTRC966_01615 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTRC966_02680 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:ctmj03010] D CTRC966_00515 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CTRC966_03595 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CTRC966_02755 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CTRC966_03300 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CTRC966_02705 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CTRC966_04255 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CTRC966_02295 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CTRC966_02720 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CTRC966_00670 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CTRC966_02285 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CTRC966_02685 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CTRC966_02300 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CTRC966_02690 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CTRC966_04175 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CTRC966_04505 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CTRC966_00145 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CTRC966_02740 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CTRC966_04260 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CTRC966_02765 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CTRC966_03250 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CTRC966_01775 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CTRC966_01635 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CTRC966_02770 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CTRC966_02785 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CTRC966_02780 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CTRC966_02725 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CTRC966_02715 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CTRC966_01625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CTRC966_04265 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CTRC966_01630 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CTRC966_01640 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CTRC966_00665 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CTRC966_02735 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CTRC966_02700 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CTRC966_02750 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CTRC966_02675 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CTRC966_02710 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CTRC966_00155 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CTRC966_04460 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CTRC966_02190 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CTRC966_02760 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CTRC966_02775 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CTRC966_02730 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CTRC966_04245 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D CTRC966_02185 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CTRC966_00455 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CTRC966_02745 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CTRC966_00125 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CTRC966_04310 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CTRC966_00795 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CTRC966_04455 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CTRC966_04170 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CTRC966_r04790 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTRC966_r04792 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTRC966_r04794 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTRC966_r04796 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTRC966_r04786 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTRC966_r04788 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:ctmj00970] D CTRC966_t04760 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTRC966_t04722 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTRC966_t04746 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTRC966_t04762 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTRC966_t04756 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTRC966_t04712 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTRC966_t04728 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CTRC966_t04776 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CTRC966_t04778 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTRC966_t04768 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTRC966_t04770 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTRC966_t04772 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTRC966_t04774 tRNA-His K14226 tRNA-His; tRNA His D CTRC966_t04720 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTRC966_t04744 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04752 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04754 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04748 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04784 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04766 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTRC966_t04724 tRNA-Met K14230 tRNA-Met; tRNA Met D CTRC966_t04736 tRNA-Met K14230 tRNA-Met; tRNA Met D CTRC966_t04726 tRNA-Met K14230 tRNA-Met; tRNA Met D CTRC966_t04742 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CTRC966_t04758 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTRC966_t04714 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTRC966_t04750 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTRC966_t04740 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTRC966_t04782 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTRC966_t04738 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTRC966_t04716 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTRC966_t04734 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTRC966_t04764 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTRC966_t04732 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CTRC966_t04718 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CTRC966_t04730 tRNA-Val K14237 tRNA-Val; tRNA Val D CTRC966_t04780 tRNA-Val K14237 tRNA-Val; tRNA Val D CTRC966_02335 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTRC966_00020 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CTRC966_00025 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CTRC966_00015 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CTRC966_03970 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTRC966_02855 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTRC966_04230 glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTRC966_03055 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTRC966_03860 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTRC966_04150 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTRC966_00175 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTRC966_02795 fmt; methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D CTRC966_01555 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTRC966_01085 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTRC966_00110 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTRC966_04145 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTRC966_02390 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTRC966_02050 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTRC966_02860 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTRC966_04465 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTRC966_02500 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTRC966_00335 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTRC966_03075 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:ctmj03060] D CTRC966_02695 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CTRC966_01650 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CTRC966_01830 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CTRC966_02355 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D CTRC966_03930 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CTRC966_01300 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTRC966_03705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTRC966_00140 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTRC966_04380 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CTRC966_00115 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CTRC966_02130 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:ctmj04122] D CTRC966_03815 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTRC966_01335 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTRC966_01485 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] C 03050 Proteasome C 03018 RNA degradation [PATH:ctmj03018] D CTRC966_03085 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTRC966_04500 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CTRC966_02070 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D CTRC966_02595 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CTRC966_01065 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTRC966_02065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CTRC966_00575 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTRC966_03720 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CTRC966_02140 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:ctmj03030] D CTRC966_01355 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_02825 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_02870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTRC966_01730 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00975 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00255 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTRC966_00405 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTRC966_02630 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CTRC966_04215 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CTRC966_00235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTRC966_00160 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CTRC966_00050 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CTRC966_00775 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:ctmj03410] D CTRC966_03685 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CTRC966_03200 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CTRC966_00560 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CTRC966_03290 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CTRC966_02345 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTRC966_00775 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:ctmj03420] D CTRC966_03965 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CTRC966_01725 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CTRC966_03080 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CTRC966_04200 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CTRC966_03205 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTRC966_00775 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:ctmj03430] D CTRC966_04205 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CTRC966_03025 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D CTRC966_03205 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTRC966_01700 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CTRC966_01705 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CTRC966_02345 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTRC966_00235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTRC966_02870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTRC966_00405 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTRC966_01730 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00975 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00255 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTRC966_01355 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_02825 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_00775 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:ctmj03440] D CTRC966_02345 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTRC966_00235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTRC966_00400 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D CTRC966_02470 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CTRC966_01245 recR; recombination protein RecR K06187 recR; recombination protein RecR D CTRC966_03430 recA; recombinase A K03553 recA; recombination protein RecA D CTRC966_02650 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CTRC966_00215 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CTRC966_02655 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CTRC966_03370 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CTRC966_03375 exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CTRC966_03440 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTRC966_00180 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTRC966_02870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTRC966_00405 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTRC966_01730 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00975 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00255 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTRC966_01355 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_02825 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_04130 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus D CTRC966_04285 exported insulinase/protease K01408 IDE; insulysin [EC:3.4.24.56] C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:ctmj02010] D CTRC966_01990 arginine transport substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D CTRC966_00685 putative ABC-membrane transport protein, inner membrane component K17077 artQ; arginine/lysine/histidine transport system permease protein D CTRC966_00690 ABC transporter, ATP-binding component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CTRC966_01030 oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CTRC966_01035 oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D CTRC966_01040 oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D CTRC966_01050 oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CTRC966_01045 oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTRC966_02165 metal transporter, metal-binding component K09815 znuA; zinc transport system substrate-binding protein D CTRC966_02175 metal transporter, membrane permease component K09816 znuB; zinc transport system permease protein D CTRC966_02170 metal transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CTRC966_00365 ABC transport protein, solute binding component K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CTRC966_00375 ABC transport protein, membrane permease K11708 troC; manganese/zinc/iron transport system permease protein D CTRC966_00380 ABC transport protein, membrane permease K11709 troD; manganese/zinc/iron transport system permease protein D CTRC966_00370 ABC transport protein, ATP-binding component K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CTRC966_01875 putative inner membrane protein K03523 bioY; biotin transport system substrate-specific component D CTRC966_00800 lipoprotein releasing systen, inner membrane component K09808 lolC_E; lipoprotein-releasing system permease protein D CTRC966_00805 lipoprotein release ATP-binding component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CTRC966_04485 putative membrane transport protein K07091 lptF; lipopolysaccharide export system permease protein D CTRC966_04480 putative membrane transport protein K11720 lptG; lipopolysaccharide export system permease protein D CTRC966_03450 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] C 02060 Phosphotransferase system (PTS) [PATH:ctmj02060] D CTRC966_01740 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CTRC966_01745 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CTRC966_01500 PTS family membrane transport protein IIA subunit K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CTRC966_01505 PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:ctmj03070] D CTRC966_03560 Yop proteins translocation protein C/general secretion pathway protein K03219 yscC; type III secretion protein C D CTRC966_00470 low calcium response E K04058 yscW; type III secretion protein W D CTRC966_02940 type III secretion system protein, membrane component K03222 yscJ; type III secretion protein J D CTRC966_02960 type III secretion system protein K03226 yscR; type III secretion protein R D CTRC966_02965 type III secretion system, membrane protein K03227 yscS; type III secretion protein S D CTRC966_02970 type III secretion system, membrane protein K03228 yscT; type III secretion protein T D CTRC966_00480 type III secretion system protein K03229 yscU; type III secretion protein U D CTRC966_00475 low calcium response protein D (predicted to be part of the TTSS apparatus) K03230 yscV; type III secretion protein V D CTRC966_03535 type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CTRC966_02955 type III secretion system protein K03223 yscL; type III secretion protein L D CTRC966_03010 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D CTRC966_03000 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D CTRC966_03005 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CTRC966_02355 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D CTRC966_01650 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CTRC966_01830 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CTRC966_02695 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CTRC966_03930 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CTRC966_01300 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTRC966_03705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTRC966_04380 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CTRC966_00140 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] B B 09132 Signal transduction C 02020 Two-component system [PATH:ctmj02020] D CTRC966_04395 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTRC966_00330 RNA polymerase sigma factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA D CTRC966_01425 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTRC966_01295 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTRC966_02865 putative sugar phosphate permease K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CTRC966_02455 two component regulator, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CTRC966_02460 two component system response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC D CTRC966_03210 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CTRC966_00075 cytochrome d ubiquinol oxidase subunit I K00425 cydA; cytochrome bd ubiquinol oxidase subunit I [EC:7.1.1.7] D CTRC966_00080 cytochrome d ubiquinol oxidase subunit II K00426 cydB; cytochrome bd ubiquinol oxidase subunit II [EC:7.1.1.7] C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:ctmj02024] D CTRC966_01120 glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D CTRC966_03865 riboflavin biosynthesis protein (diaminohydroxyphosphoribosylaminopyrimidine deaminase) K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D CTRC966_01030 oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CTRC966_01035 oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D CTRC966_01040 oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D CTRC966_01050 oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CTRC966_01045 oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTRC966_02525 oligopeptide transport system, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTRC966_00735 oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTRC966_00915 oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTRC966_02520 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTRC966_02515 oligonucleotide transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTRC966_03650 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTRC966_03645 ABC transport protein, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTRC966_01300 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D CTRC966_02355 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D CTRC966_01650 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CTRC966_01830 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CTRC966_02695 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CTRC966_03930 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CTRC966_03705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTRC966_04380 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CTRC966_00140 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis D CTRC966_03550 type III secretion system protein K02417 fliN; flagellar motor switch protein FliN C 02040 Flagellar assembly [PATH:ctmj02040] D CTRC966_03800 type III secretion system protein K02409 fliF; flagellar M-ring protein FliF D CTRC966_03795 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CTRC966_03790 type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CTRC966_03550 type III secretion system protein K02417 fliN; flagellar motor switch protein FliN D CTRC966_00325 type III secretion system protein K02400 flhA; flagellar biosynthesis protein FlhA D CTRC966_03240 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D CTRC966_03210 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CTRC966_00330 RNA polymerase sigma factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells D CTRC966_03085 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:ctmj01501] D CTRC966_01030 oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CTRC966_01035 oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D CTRC966_01040 oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D CTRC966_01050 oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CTRC966_01045 oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTRC966_01400 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:ctmj01502] D CTRC966_04045 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTRC966_04015 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D CTRC966_04020 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTRC966_04040 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ctmj01503] D CTRC966_01390 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTRC966_04395 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTRC966_02800 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:ctmj01000] C 01001 Protein kinases [BR:ctmj01001] D CTRC966_01550 pknD; serine/threonine-protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D CTRC966_02890 sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CTRC966_02455 two component regulator, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:ctmj01009] D CTRC966_01065 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTRC966_01340 protein phosphatase 2C K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] C 01002 Peptidases and inhibitors [BR:ctmj01002] D CTRC966_02130 lspA; lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36] D CTRC966_04355 glucosamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D CTRC966_01315 inner membrane protein K07052 K07052; CAAX protease family protein D CTRC966_00590 oligoendopeptidase F K08602 pepF; oligoendopeptidase F [EC:3.4.24.-] D CTRC966_04285 exported insulinase/protease K01408 IDE; insulysin [EC:3.4.24.56] D CTRC966_04400 metalloprotease-insulinase K06972 PITRM1; presequence protease [EC:3.4.24.-] D CTRC966_00245 multifunctional aminopeptidase A K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D CTRC966_04555 methionine aminopeptidase K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D CTRC966_03020 proline dipeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D CTRC966_04495 cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTRC966_00390 putative protease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D CTRC966_04395 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTRC966_02900 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTRC966_03730 clpP; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CTRC966_02255 ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D CTRC966_01785 ATP-dependent protease La K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D CTRC966_00115 signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89] D CTRC966_02310 carboxy-terminal processing protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] C 01003 Glycosyltransferases [BR:ctmj01003] D CTRC966_04240 glgA; glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21] C 01005 Lipopolysaccharide biosynthesis proteins [BR:ctmj01005] D CTRC966_02800 UDP-N-acetylglucosamine acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D CTRC966_02145 lpxB; lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D CTRC966_02810 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D CTRC966_01260 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D CTRC966_02100 lpxK; tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D CTRC966_00060 lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D CTRC966_01080 3-deoxy-D-manno-octulosonic-acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D CTRC966_03460 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D CTRC966_00950 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D CTRC966_02080 carbohydrate isomerase K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ctmj01011] D CTRC966_02395 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D CTRC966_04435 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D CTRC966_04045 bifunctional D-alanyl-alanine synthetase A/UDP-N-acetylmuramate--L-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D CTRC966_04025 murD; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D CTRC966_01395 murE; UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13] D CTRC966_04020 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D CTRC966_04040 murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D CTRC966_03285 integral membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D CTRC966_01400 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CTRC966_02900 D-alanyl-D-alanine carboxypeptidase K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D CTRC966_01390 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:ctmj01004] D CTRC966_01235 acyl-carrier-protein S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D CTRC966_01240 3-oxoacyl-(acyl carrier protein) synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D CTRC966_04085 3-oxoacyl-(acyl carrier protein) synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D CTRC966_01230 fabG; 3-ketoacyl-(acyl-carrier-protein) reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D CTRC966_02805 fabZ; (3R)-hydroxymyristoyl-ACP dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D CTRC966_00545 enoyl-(acyl carrier protein) reductase K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D CTRC966_04290 glycerol-3-phosphate acyltransferase K00630 ATS1; glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15] D CTRC966_04315 putative glycerol-3-phosphate acyltransferase PlsX K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D CTRC966_04115 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D CTRC966_02385 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins C 01006 Prenyltransferases [BR:ctmj01006] D CTRC966_03310 dimethylallyltransferase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29] D CTRC966_02365 undecaprenyl pyrophosphate synthase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D CTRC966_04065 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CTRC966_01135 ubiA; prenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] C 01007 Amino acid related enzymes [BR:ctmj01007] D CTRC966_02335 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTRC966_00335 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTRC966_03075 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CTRC966_04150 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTRC966_02390 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTRC966_00175 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTRC966_00110 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTRC966_01555 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTRC966_01085 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTRC966_04145 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTRC966_02855 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTRC966_02860 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTRC966_03860 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTRC966_02050 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTRC966_03055 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTRC966_03970 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTRC966_04465 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTRC966_02500 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTRC966_03360 aromatic amino acid aminotransferase K00813 aspC; aspartate aminotransferase [EC:2.6.1.1] D CTRC966_02035 L,L-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83] D CTRC966_04125 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D CTRC966_01090 glutamate-1-semialdehyde aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:ctmj03000] D CTRC966_03840 biotin--protein ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D CTRC966_00880 Trp operon repressor K03720 trpR; TrpR family transcriptional regulator, trp operon repressor D CTRC966_03640 putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTRC966_02055 hrcA; heat-inducible transcription repressor K03705 hrcA; heat-inducible transcriptional repressor D CTRC966_01095 hypothetical protein K07735 algH; putative transcriptional regulator D CTRC966_02125 dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D CTRC966_02120 nrdR; transcriptional regulator NrdR K07738 nrdR; transcriptional repressor NrdR C 03021 Transcription machinery [BR:ctmj03021] D CTRC966_02680 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CTRC966_01620 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTRC966_01615 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTRC966_03240 RNA polymerase sigma factor K03086 rpoD; RNA polymerase primary sigma factor D CTRC966_03210 RNA polymerase factor sigma-54 K03092 rpoN; RNA polymerase sigma-54 factor D CTRC966_00330 RNA polymerase sigma factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA D CTRC966_00510 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CTRC966_04445 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D CTRC966_01645 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CTRC966_03090 sigma regulatory family protein-PP2C phosphatase K07315 rsbU_P; phosphoserine phosphatase RsbU/P [EC:3.1.3.3] D CTRC966_04060 anti-sigma F factor antagonist K04749 rsbV; anti-sigma B factor antagonist D CTRC966_02890 sigma regulatory factor-histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D CTRC966_02125 dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D CTRC966_02595 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:ctmj03019] D CTRC966_04295 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D CTRC966_01535 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTRC966_02070 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D CTRC966_03085 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTRC966_04500 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D CTRC966_02595 rho; transcription termination factor Rho K03628 rho; transcription termination factor Rho D CTRC966_01065 diphosphate--fructose-6-phosphate 1-phosphotransferase K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11] D CTRC966_02065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CTRC966_00575 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTRC966_03720 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D CTRC966_02140 polyA polymerase K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] C 03041 Spliceosome C 03011 Ribosome [BR:ctmj03011] D CTRC966_00515 rpsA; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1 D CTRC966_03595 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2 D CTRC966_02755 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3 D CTRC966_03300 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4 D CTRC966_02705 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5 D CTRC966_04255 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6 D CTRC966_02295 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7 D CTRC966_02720 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8 D CTRC966_00670 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9 D CTRC966_02285 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10 D CTRC966_02685 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11 D CTRC966_02300 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12 D CTRC966_02690 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13 D CTRC966_04175 rpsN; 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14 D CTRC966_04505 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15 D CTRC966_00145 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16 D CTRC966_02740 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17 D CTRC966_04260 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18 D CTRC966_02765 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19 D CTRC966_03250 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20 D CTRC966_01775 rpsU; 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21 D CTRC966_01635 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1 D CTRC966_02770 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2 D CTRC966_02785 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3 D CTRC966_02780 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4 D CTRC966_02725 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5 D CTRC966_02715 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6 D CTRC966_04265 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9 D CTRC966_01630 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10 D CTRC966_01640 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11 D CTRC966_01625 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12 D CTRC966_00665 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13 D CTRC966_02735 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14 D CTRC966_02700 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15 D CTRC966_02750 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16 D CTRC966_02675 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17 D CTRC966_02710 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18 D CTRC966_00155 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19 D CTRC966_04460 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20 D CTRC966_02190 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21 D CTRC966_02760 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22 D CTRC966_02775 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23 D CTRC966_02730 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24 D CTRC966_02185 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27 D CTRC966_00455 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28 D CTRC966_02745 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29 D CTRC966_00125 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31 D CTRC966_04310 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32 D CTRC966_00795 rpmG; 50S ribosomal protein L33 K02913 RP-L33; large subunit ribosomal protein L33 D CTRC966_04455 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35 D CTRC966_04170 rpmJ; 50S ribosomal protein L36 K02919 RP-L36; large subunit ribosomal protein L36 D CTRC966_04245 50S ribosomal protein L25/general stress protein Ctc K02897 RP-L25; large subunit ribosomal protein L25 D CTRC966_r04786 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTRC966_r04788 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTRC966_r04790 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTRC966_r04792 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTRC966_r04794 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTRC966_r04796 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:ctmj03009] D CTRC966_01535 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTRC966_02180 obgE; GTPase CgtA K03979 obgE; GTPase [EC:3.6.5.-] D CTRC966_02125 dnaK suppressor protein K06204 dksA; RNA polymerase-binding transcription factor D CTRC966_00510 nusA; transcription elongation factor NusA K02600 nusA; transcription termination/antitermination protein NusA D CTRC966_04445 nusB; transcription antitermination protein NusB K03625 nusB; transcription antitermination protein NusB D CTRC966_01645 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG D CTRC966_01840 ksgA; 16S ribosomal RNA methyltransferase KsgA/Dim1 family protein K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D CTRC966_02575 methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D CTRC966_01410 16S rRNA m(4)C1402 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D CTRC966_00260 hypothetical protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D CTRC966_02110 N6-adenine-specific DNA methylase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D CTRC966_03830 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D CTRC966_00555 tRNA pseudouridine synthase A K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D CTRC966_03480 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D CTRC966_04295 ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-] D CTRC966_00960 Holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D CTRC966_03715 GTP-binding protein Der K03977 engA; GTPase D CTRC966_01980 putative nucleotide-binding protein K03665 hflX; GTPase D CTRC966_00725 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CTRC966_00500 rbfA; ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D CTRC966_04080 hypothetical protein K09710 ybeB; ribosome-associated protein D CTRC966_02210 hypothetical protein K07042 ybeY; probable rRNA maturation factor D CTRC966_00485 GTP-binding protein YchF K06942 ychF; ribosome-binding ATPase D CTRC966_04305 hypothetical protein K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:ctmj03016] D CTRC966_01800 ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11] D CTRC966_02335 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTRC966_02050 prolyl-tRNA synthetase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D CTRC966_00110 ileS; isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D CTRC966_01085 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTRC966_00175 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D CTRC966_02390 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTRC966_04145 lysS; lysyl-tRNA synthetase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D CTRC966_02855 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTRC966_03970 alaS; alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D CTRC966_03055 thrS; threonyl-tRNA synthetase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D CTRC966_03860 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D CTRC966_04150 cysS; cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D CTRC966_01555 valS; valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D CTRC966_02860 hisS; histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D CTRC966_04465 pheS; phenylalanyl-tRNA synthetase subunit alpha K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D CTRC966_02500 pheT; phenylalanyl-tRNA synthetase subunit beta K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D CTRC966_00335 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTRC966_03075 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D CTRC966_02010 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CTRC966_04425 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D CTRC966_02435 truA; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D CTRC966_00495 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D CTRC966_03815 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTRC966_01335 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTRC966_00725 hypothetical protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D CTRC966_04065 miaA; tRNA delta(2)-isopentenylpyrophosphate transferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D CTRC966_03690 trmE; tRNA modification GTPase TrmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D CTRC966_02635 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CTRC966_04110 3'(2'),5'-bisphosphate nucleotidase K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] D CTRC966_04165 rnpA; ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D CTRC966_04230 glycyl-tRNA synthetase K14164 glyQS; glycyl-tRNA synthetase [EC:6.1.1.14] D CTRC966_04510 cytosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D CTRC966_03395 putative oxidoreductase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D CTRC966_00150 trmD; tRNA (guanine-N(1)-)-methyltransferase/unknown domain fusion protein K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D CTRC966_02845 SpoU family rRNA methylase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D CTRC966_02105 23S rRNA methyltransferase K03437 spoU; RNA methyltransferase, TrmH family D CTRC966_01485 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D CTRC966_01125 hypothetical protein K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D CTRC966_01005 queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D CTRC966_04490 tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D CTRC966_01025 UGMP family protein K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D CTRC966_02830 putative nucleotide-binding protein K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D CTRC966_02070 exoribonuclease II K12573 rnr; ribonuclease R [EC:3.1.13.1] D CTRC966_04500 polynucleotide phosphorylase/polyadenylase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:ctmj03012] D CTRC966_00505 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CTRC966_04450 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CTRC966_03590 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CTRC966_01655 elongation factor Tu K02358 tuf; elongation factor Tu D CTRC966_02290 elongation factor G K02355 fusA; elongation factor G D CTRC966_00130 prfA; peptide chain release factor 1 K02835 prfA; peptide chain release factor 1 D CTRC966_03580 frr; ribosome recycling factor K02838 frr; ribosome recycling factor D CTRC966_00135 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D CTRC966_04250 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D CTRC966_01660 infA; translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1 D CTRC966_03995 elongation factor P K02356 efp; elongation factor P D CTRC966_00645 elongation factor P K02356 efp; elongation factor P D CTRC966_02415 prfB; peptide chain release factor 2 K02836 prfB; peptide chain release factor 2 C 03110 Chaperones and folding catalysts [BR:ctmj03110] D CTRC966_00600 chaperone-protease ClpB K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D CTRC966_01480 ATP-dependent Clp protease K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC D CTRC966_03725 clpX; ATP-dependent protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D CTRC966_02065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CTRC966_00575 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTRC966_01770 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CTRC966_02060 HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE D CTRC966_00580 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D CTRC966_04395 serine protease K04771 degP; serine protease Do [EC:3.4.21.107] D CTRC966_04495 cell division protein K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D CTRC966_02840 thioredoxin K03671 TXN; thioredoxin C 04131 Membrane trafficking [BR:ctmj04131] D CTRC966_02645 ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D CTRC966_02670 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTRC966_03820 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D CTRC966_01720 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] C 04121 Ubiquitin system C 03051 Proteasome C 03032 DNA replication proteins [BR:ctmj03032] D CTRC966_01425 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTRC966_01295 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTRC966_02630 replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D CTRC966_04215 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D CTRC966_00235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTRC966_02870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTRC966_00405 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTRC966_00255 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTRC966_01355 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_02825 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_01730 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00975 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00160 rnhB; ribonuclease HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D CTRC966_00050 ribonuclease HIII K03471 rnhC; ribonuclease HIII [EC:3.1.26.4] D CTRC966_00775 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTRC966_03490 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTRC966_00985 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTRC966_03495 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTRC966_00990 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTRC966_03390 DNA topoisomerase I/SWI domain fusion protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:ctmj03036] D CTRC966_01535 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3] D CTRC966_01425 dnaA; chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTRC966_01295 chromosomal replication initiation protein K02313 dnaA; chromosomal replication initiator protein D CTRC966_01400 penicillin-binding protein K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D CTRC966_03910 cell division protein K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D CTRC966_04035 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CTRC966_01390 N-acetylmuramoyl-L-alanine amidase K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D CTRC966_03750 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTRC966_03845 cell cycle protein K05837 rodA; rod shape determining protein RodA D CTRC966_03060 Chromosome partitioning ATPase (ParA family) protein K03496 parA; chromosome partitioning protein D CTRC966_03640 putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D CTRC966_02635 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D CTRC966_01805 xerC; site-specific tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC D CTRC966_04645 xerD; site-specific tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD C 03400 DNA repair and recombination proteins [BR:ctmj03400] D CTRC966_02510 putative DNA methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D CTRC966_03200 uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27] D CTRC966_00560 A/G-specific adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D CTRC966_03685 endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D CTRC966_01510 dut; deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D CTRC966_03290 endonuclease IV K01151 nfo; deoxyribonuclease IV [EC:3.1.21.2] D CTRC966_02345 single-stranded-DNA-specific exonuclease K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D CTRC966_00775 ligA; NAD-dependent DNA ligase LigA K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D CTRC966_01725 excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D CTRC966_03080 excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D CTRC966_04200 uvrC; excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D CTRC966_03205 DNA helicase K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D CTRC966_01620 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D CTRC966_01615 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D CTRC966_02680 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D CTRC966_03965 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D CTRC966_04205 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D CTRC966_03025 mutL; DNA mismatch repair protein K03572 mutL; DNA mismatch repair protein MutL D CTRC966_01700 xseA; exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D CTRC966_01705 exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D CTRC966_02870 dnaE; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D CTRC966_00405 DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D CTRC966_00255 hypothetical protein K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D CTRC966_01355 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_02825 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D CTRC966_01730 DNA polymerase III subunits gamma and tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00975 DNA polymerase III subunit delta' K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D CTRC966_00235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTRC966_03370 exodeoxyribonuclease V beta chain K03582 recB; exodeoxyribonuclease V beta subunit [EC:3.1.11.5] D CTRC966_03375 exodeoxyribonuclease V gamma chain K03583 recC; exodeoxyribonuclease V gamma subunit [EC:3.1.11.5] D CTRC966_03440 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTRC966_00180 exodeoxyribonuclease V alpha chain K03581 recD; exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] D CTRC966_03430 recA; recombinase A K03553 recA; recombination protein RecA D CTRC966_02650 ruvA; Holliday junction DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA D CTRC966_00215 ruvB; Holliday junction DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D CTRC966_02655 ruvC; Holliday junction resolvase K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D CTRC966_04130 primosome assembly protein PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D CTRC966_01540 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D CTRC966_00400 recF; recombination protein F K03629 recF; DNA replication and repair protein RecF D CTRC966_02470 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D CTRC966_01245 recR; recombination protein RecR K06187 recR; recombination protein RecR D CTRC966_03490 DNA topoisomerase IV subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTRC966_00985 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D CTRC966_03495 DNA topoisomerase IV subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTRC966_00990 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D CTRC966_03390 DNA topoisomerase I/SWI domain fusion protein K03168 topA; DNA topoisomerase I [EC:5.6.2.1] D CTRC966_04415 ribonucleotide-diphosphate reductase subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D CTRC966_04420 ribonucleotide-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:ctmj03029] D CTRC966_00505 infB; translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2 D CTRC966_04450 infC; translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3 D CTRC966_03590 tsf; elongation factor Ts K02357 tsf; elongation factor Ts D CTRC966_01655 elongation factor Tu K02358 tuf; elongation factor Tu D CTRC966_02290 elongation factor G K02355 fusA; elongation factor G D CTRC966_00335 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D CTRC966_01085 leuS; leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D CTRC966_02855 aspS; aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D CTRC966_02390 argS; arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D CTRC966_00020 gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D CTRC966_00025 gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D CTRC966_00015 gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D CTRC966_00235 single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein D CTRC966_01250 outer membrane protein (variable surface antigen) K07277 SAM50; outer membrane protein insertion porin family D CTRC966_02065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CTRC966_02060 HSP-70 cofactor K03687 GRPE; molecular chaperone GrpE D CTRC966_00575 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTRC966_00580 groES; co-chaperonin GroES K04078 groES; chaperonin GroES D CTRC966_01770 chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D CTRC966_03815 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTRC966_01335 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTRC966_01300 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:ctmj02000] D CTRC966_04570 ABC transporter permease K02050 ABC.SN.P; NitT/TauT family transport system permease protein D CTRC966_00940 ABC transporter, ATP-binding protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D CTRC966_01990 arginine transport substrate-binding protein K09996 artJ; arginine transport system substrate-binding protein D CTRC966_00685 putative ABC-membrane transport protein, inner membrane component K17077 artQ; arginine/lysine/histidine transport system permease protein D CTRC966_00690 ABC transporter, ATP-binding component K23060 artR; arginine/lysine/histidine transport system ATP-binding protein [EC:7.4.2.1] D CTRC966_02570 glutamine-binding protein K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D CTRC966_01030 oligopeptide transport system binding protein K15580 oppA; oligopeptide transport system substrate-binding protein D CTRC966_01035 oligopeptide transport system membrane permease K15581 oppB; oligopeptide transport system permease protein D CTRC966_01040 oligopeptide transport system membrane permease K15582 oppC; oligopeptide transport system permease protein D CTRC966_01050 oligopeptide transport system ATP-binding protein K15583 oppD; oligopeptide transport system ATP-binding protein D CTRC966_01045 oligopeptide transport system ATP-binding protein K10823 oppF; oligopeptide transport system ATP-binding protein D CTRC966_02525 oligopeptide transport system, binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTRC966_00735 oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTRC966_00915 oligopeptide transport system binding protein K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D CTRC966_02520 hypothetical protein K02033 ABC.PE.P; peptide/nickel transport system permease protein D CTRC966_02515 oligonucleotide transport system permease K02034 ABC.PE.P1; peptide/nickel transport system permease protein D CTRC966_03650 peptide ABC transporter ATPase K02031 ddpD; peptide/nickel transport system ATP-binding protein D CTRC966_03645 ABC transport protein, ATPase component K02032 ddpF; peptide/nickel transport system ATP-binding protein D CTRC966_02165 metal transporter, metal-binding component K09815 znuA; zinc transport system substrate-binding protein D CTRC966_02175 metal transporter, membrane permease component K09816 znuB; zinc transport system permease protein D CTRC966_02170 metal transport system ATP-binding protein K09817 znuC; zinc transport system ATP-binding protein [EC:7.2.2.20] D CTRC966_00365 ABC transport protein, solute binding component K11707 troA; manganese/zinc/iron transport system substrate-binding protein D CTRC966_00375 ABC transport protein, membrane permease K11708 troC; manganese/zinc/iron transport system permease protein D CTRC966_00380 ABC transport protein, membrane permease K11709 troD; manganese/zinc/iron transport system permease protein D CTRC966_00370 ABC transport protein, ATP-binding component K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5] D CTRC966_01875 putative inner membrane protein K03523 bioY; biotin transport system substrate-specific component D CTRC966_04485 putative membrane transport protein K07091 lptF; lipopolysaccharide export system permease protein D CTRC966_04480 putative membrane transport protein K11720 lptG; lipopolysaccharide export system permease protein D CTRC966_03450 ABC transporter ATP-binding protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D CTRC966_00800 lipoprotein releasing systen, inner membrane component K09808 lolC_E; lipoprotein-releasing system permease protein D CTRC966_00805 lipoprotein release ATP-binding component K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D CTRC966_03625 ABC transporter ATP-binding protein K09013 sufC; Fe-S cluster assembly ATP-binding protein D CTRC966_02865 putative sugar phosphate permease K07783 uhpC; MFS transporter, OPA family, sugar phosphate sensor protein UhpC D CTRC966_01740 phosphoenolpyruvate-protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D CTRC966_01745 phosphocarrier protein HPr K02784 ptsH; phosphocarrier protein HPr D CTRC966_01500 PTS family membrane transport protein IIA subunit K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CTRC966_01505 PTS-family membrane transport protein IIA component K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D CTRC966_01010 magnesium transport protein K06213 mgtE; magnesium transporter D CTRC966_03140 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD D CTRC966_03135 macromolecule transporter K03562 tolQ; biopolymer transport protein TolQ D CTRC966_01325 putative membrane transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTRC966_01330 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTRC966_02215 putative cation efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTRC966_03600 major outer membrane protein K03162 ompA; major outer membrane protein D CTRC966_03770 outer membrane protein B K08719 K08719; outer membrane protein B D CTRC966_01250 outer membrane protein (variable surface antigen) K07277 SAM50; outer membrane protein insertion porin family D CTRC966_01955 arginine/ornithine antiporter K03758 arcD; arginine:ornithine antiporter / lysine permease D CTRC966_01120 glutamate/gamma-aminobutyrate antiporter K20265 gadC; glutamate:GABA antiporter D CTRC966_04360 tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein D CTRC966_04370 tyrosine-specific transport protein K03834 tyrP; tyrosine-specific transport protein D CTRC966_04590 sulfate transporter K03321 TC.SULP; sulfate permease, SulP family D CTRC966_03285 integral membrane protein K03980 murJ; putative peptidoglycan lipid II flippase D CTRC966_00740 exported protein K09125 yhhQ; queuosine precursor transporter D CTRC966_04560 putative integral membrane protein K05595 marC; multiple antibiotic resistance protein D CTRC966_04035 cell division protein FtsW K03588 ftsW; cell division protein FtsW D CTRC966_03155 peptidoglycan-associated lipoprotein K03640 pal; peptidoglycan-associated lipoprotein D CTRC966_03150 tolB; translocation protein TolB K03641 tolB; TolB protein C 02044 Secretion system [BR:ctmj02044] D CTRC966_03010 general secretion pathway protein D K02453 gspD; general secretion pathway protein D D CTRC966_03005 general secretion pathway protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D CTRC966_03000 general secretion pathway protein F K02455 gspF; general secretion pathway protein F D CTRC966_03400 integral membrane protein K02221 yggT; YggT family protein D CTRC966_03560 Yop proteins translocation protein C/general secretion pathway protein K03219 yscC; type III secretion protein C D CTRC966_02940 type III secretion system protein, membrane component K03222 yscJ; type III secretion protein J D CTRC966_02955 type III secretion system protein K03223 yscL; type III secretion protein L D CTRC966_03535 type III secretion system ATPase K03224 yscN; ATP synthase in type III secretion protein N [EC:7.4.2.8] D CTRC966_02960 type III secretion system protein K03226 yscR; type III secretion protein R D CTRC966_02965 type III secretion system, membrane protein K03227 yscS; type III secretion protein S D CTRC966_02970 type III secretion system, membrane protein K03228 yscT; type III secretion protein T D CTRC966_00480 type III secretion system protein K03229 yscU; type III secretion protein U D CTRC966_00475 low calcium response protein D (predicted to be part of the TTSS apparatus) K03230 yscV; type III secretion protein V D CTRC966_00470 low calcium response E K04058 yscW; type III secretion protein W D CTRC966_00325 type III secretion system protein K02400 flhA; flagellar biosynthesis protein FlhA D CTRC966_03800 type III secretion system protein K02409 fliF; flagellar M-ring protein FliF D CTRC966_03795 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CTRC966_03790 type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CTRC966_03550 type III secretion system protein K02417 fliN; flagellar motor switch protein FliN D CTRC966_03705 secA; preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D CTRC966_02355 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein D CTRC966_01650 secE; preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE D CTRC966_01830 secG; preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG D CTRC966_02695 secY; preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY D CTRC966_00140 signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D CTRC966_04380 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D CTRC966_03930 yajC; preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC D CTRC966_01300 putative inner membrane protein translocase component YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase C 02042 Bacterial toxins [BR:ctmj02042] D CTRC966_01325 putative membrane transport protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTRC966_01330 hypothetical protein K03699 tlyC; magnesium and cobalt exporter, CNNM family D CTRC966_02215 putative cation efflux protein K03699 tlyC; magnesium and cobalt exporter, CNNM family C 02022 Two-component system [BR:ctmj02022] D CTRC966_02455 two component regulator, histidine kinase K07710 atoS; two-component system, NtrC family, sensor histidine kinase AtoS [EC:2.7.13.3] D CTRC966_02460 two component system response regulator K07714 atoC; two-component system, NtrC family, response regulator AtoC C 02035 Bacterial motility proteins [BR:ctmj02035] D CTRC966_03795 hypothetical protein K02411 fliH; flagellar assembly protein FliH D CTRC966_03790 type III secretion system ATPase K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D CTRC966_00325 type III secretion system protein K02400 flhA; flagellar biosynthesis protein FlhA D CTRC966_03550 type III secretion system protein K02417 fliN; flagellar motor switch protein FliN D CTRC966_03800 type III secretion system protein K02409 fliF; flagellar M-ring protein FliF D CTRC966_00330 RNA polymerase sigma factor sigma-28 K02405 fliA; RNA polymerase sigma factor FliA C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:ctmj04812] D CTRC966_03750 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTRC966_03060 Chromosome partitioning ATPase (ParA family) protein K03496 parA; chromosome partitioning protein D CTRC966_03640 putative chromosome partitioning protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:ctmj04147] D CTRC966_03085 eno; enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D CTRC966_02670 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D CTRC966_03665 pgk; phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D CTRC966_01720 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D CTRC966_03170 thioredoxin peroxidase K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D CTRC966_00575 groEL; chaperonin GroEL K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D CTRC966_02065 dnaK; molecular chaperone DnaK K04043 dnaK; molecular chaperone DnaK D CTRC966_01975 pgi; glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D CTRC966_01655 elongation factor Tu K02358 tuf; elongation factor Tu D CTRC966_02010 hypothetical protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D CTRC966_00680 adk; adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D CTRC966_04655 glycogen branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D CTRC966_03340 delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D CTRC966_02930 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D CTRC966_00965 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D CTRC966_01695 tpiA; triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D CTRC966_03820 phosphoglyceromutase K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] C 02048 Prokaryotic defense system [BR:ctmj02048] D CTRC966_03750 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTRC966_02335 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D CTRC966_03815 cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D CTRC966_01335 putative cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules C 01504 Antimicrobial resistance genes C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:ctmj03100] D CTRC966_t04760 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTRC966_t04722 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D CTRC966_t04746 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTRC966_t04762 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTRC966_t04756 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D CTRC966_t04712 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D CTRC966_t04728 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D CTRC966_t04776 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D CTRC966_t04778 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D CTRC966_t04768 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D CTRC966_t04770 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTRC966_t04772 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D CTRC966_t04774 tRNA-His K14226 tRNA-His; tRNA His D CTRC966_t04720 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D CTRC966_t04744 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04752 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04754 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04748 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04784 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D CTRC966_t04766 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D CTRC966_t04724 tRNA-Met K14230 tRNA-Met; tRNA Met D CTRC966_t04736 tRNA-Met K14230 tRNA-Met; tRNA Met D CTRC966_t04726 tRNA-Met K14230 tRNA-Met; tRNA Met D CTRC966_t04742 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D CTRC966_t04758 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTRC966_t04714 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D CTRC966_t04750 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTRC966_t04740 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTRC966_t04782 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTRC966_t04738 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D CTRC966_t04716 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTRC966_t04734 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTRC966_t04764 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D CTRC966_t04732 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D CTRC966_t04718 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D CTRC966_t04730 tRNA-Val K14237 tRNA-Val; tRNA Val D CTRC966_t04780 tRNA-Val K14237 tRNA-Val; tRNA Val D CTRC966_r04790 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTRC966_r04792 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D CTRC966_r04794 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTRC966_r04796 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D CTRC966_r04786 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D CTRC966_r04788 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D CTRC966_03215 hypothetical protein K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D CTRC966_04140 protein disulfide isomerase K01829 dsbH; disulfide reductase [EC:1.8.-.-] D CTRC966_02815 lnt; apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D CTRC966_01305 prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D CTRC966_00415 thiamine biosynthesis lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D CTRC966_00070 putative integral membrane protein K18672 dacA; diadenylate cyclase [EC:2.7.7.85] D CTRC966_03565 ATP:guanido phosphotransferase K19405 mcsB; protein arginine kinase [EC:2.7.14.1] D CTRC966_03125 putative hydrolase K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D CTRC966_01835 def; peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D CTRC966_02850 peptidyl-prolyl cis-trans isomerase K01802 E5.2.1.8; peptidylprolyl isomerase [EC:5.2.1.8] D CTRC966_03345 Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1] D CTRC966_01440 Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1] D CTRC966_01445 Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1] D CTRC966_01450 Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1] D CTRC966_01455 Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1] D CTRC966_03925 Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1] D CTRC966_03850 cation transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] C 99981 Carbohydrate metabolism C 99982 Energy metabolism D CTRC966_03810 hypothetical protein K13819 K13819; NifU-like protein C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism C 99986 Glycan metabolism C 99987 Cofactor metabolism C 99988 Secondary metabolism C 99999 Others D CTRC966_00720 putative phospholipase-carboxylesterase family protein K06999 K06999; phospholipase/carboxylesterase B B 09192 Unclassified: genetic information processing C 99973 Transcription C 99974 Translation C 99975 Protein processing D CTRC966_03570 hypothetical protein K19411 mcsA; protein arginine kinase activator D CTRC966_03735 tig; trigger factor K03545 tig; trigger factor D CTRC966_00410 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein C 99976 Replication and repair D CTRC966_04405 DNA recombination protein K09760 rmuC; DNA recombination protein RmuC C 99979 Viral proteins C 99998 Others D CTRC966_01970 late transcription unit A protein K08274 ltuA; late transcription unit A protein D CTRC966_00430 late transcription unit B protein K08275 ltuB; late transcription unit B protein D CTRC966_01735 hypothetical protein K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D CTRC966_00350 ADP,ATP carrier protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D CTRC966_02615 putative nucleotide transport protein K03301 TC.AAA; ATP:ADP antiporter, AAA family D CTRC966_03660 inorganic phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D CTRC966_01200 sodium-dependent amino acid transporter K03308 TC.NSS; neurotransmitter:Na+ symporter, NSS family D CTRC966_02095 Sodium:dicarboxylate symport protein K03309 TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family D CTRC966_03890 Na(+)-linked D-alanine glycine permease K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTRC966_02135 Sodium/alanine symporter protein K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family D CTRC966_02915 branched-chain amino acid transport system carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family D CTRC966_01060 sodium:sulfate symporter K03319 TC.DASS; divalent anion:Na+ symporter, DASS family C 99978 Cell growth C 99993 Cell motility C 99995 Signaling proteins D CTRC966_00085 hypothetical protein K07175 phoH2; PhoH-like ATPase C 99992 Structural proteins D CTRC966_01255 outer membrane protein K06142 hlpA; outer membrane protein C 99994 Others B B 09194 Poorly characterized C 99996 General function prediction only D CTRC966_03630 ABC transporter membrane protein K09015 sufD; Fe-S cluster assembly protein SufD D CTRC966_00700 hypothetical protein K07058 K07058; membrane protein D CTRC966_02235 hypothetical protein K07081 K07081; putative periplasmic solute-binding protein D CTRC966_01360 hypothetical protein K07083 K07083; putative periplasmic solute-binding protein D CTRC966_03305 putative rhodanese-related sulfurtransferase K07146 K07146; UPF0176 protein C 99997 Function unknown D CTRC966_01850 hypothetical protein K06888 K06888; uncharacterized protein D CTRC966_01070 hypothetical protein K06889 K06889; uncharacterized protein D CTRC966_00790 hypothetical protein K06889 K06889; uncharacterized protein D CTRC966_04375 putative membrane transport protein K06890 K06890; uncharacterized protein D CTRC966_03485 hypothetical protein K06960 K06960; uncharacterized protein D CTRC966_04050 hypothetical protein K06960 K06960; uncharacterized protein D CTRC966_03620 cysteine desulfurase activator complex subunit SufB K07033 K07033; uncharacterized protein D CTRC966_00745 protein translocase K07039 K07039; uncharacterized protein D CTRC966_02425 putative metallo-phosphoesterase K07098 K07098; uncharacterized protein D CTRC966_02580 putative phosphohydrolase K07099 K07099; uncharacterized protein D CTRC966_03900 SET domain containing protein K07117 K07117; uncharacterized protein D CTRC966_01670 hypothetical protein K07125 K07125; uncharacterized protein D CTRC966_02075 hypothetical protein K07164 K07164; uncharacterized protein D CTRC966_02490 hypothetical protein K08998 K08998; uncharacterized protein D CTRC966_01100 hypothetical protein K08999 K08999; uncharacterized protein D CTRC966_02025 hypothetical protein K09131 K09131; uncharacterized protein D CTRC966_00010 hypothetical protein K09779 K09779; uncharacterized protein D CTRC966_03655 hypothetical protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 13, 2024