+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Clostridium tyrobutyricum

% ! ACRISPR-Cas system B Universal Cas proteins C CTK_C25290 CRISPR-associated endoribonuclease Cas2 K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D CTK_C25330 hypothetical protein K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D CTK_C25320 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CTK_C25370 CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-B factors D CTK_C25360 hypothetical protein K19114 csh1; CRISPR-associated protein Csh1 D CTK_C25350 hypothetical protein K19115 csh2; CRISPR-associated protein Csh2 D CTK_C25320 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CTK_C25340 hypothetical protein K19116 cas5h; CRISPR-associated protein Cas5h C Subtype I-C factors D CTK_C25320 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D CTK_C25320 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D CTK_C25370 CRISPR-associated endoribonuclease Cas6 K19091 cas6; CRISPR-associated endoribonuclease Cas6 [EC:3.1.-.-] C Subtype I-E factors C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D CTK_C25320 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C CTK_C27620 type I restriction enzyme, R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C CTK_C27610 type I restriction enzyme, S subunit K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C CTK_C27600 type I restriction enzyme, M subunit K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases C DNA methyltransferases D CTK_C10400 DNA adenine methylase K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CTK_C11240 DNA methylase-like protein K06223 dam; DNA adenine methylase [EC:2.1.1.72] D CTK_C08830 DNA modification methyltransferase K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CTK_C23910 methyltransferase-like protein K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D CTK_C23510 DNA methylase N-4/N-6 domain protein K24451 zim; modification methylase B Type III R-M system B Type IV R-M system C CTK_C23320 phage-related protein K07451 mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-] # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE D CTK_C27850 mRNA interferase K07171 mazF; mRNA interferase MazF [EC:3.1.-.-] D CTK_C27860 hypothetical protein K07723 ndoAI; CopG family transcriptional regulator / antitoxin EndoAI C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD D CTK_C21260 hypothetical protein K06218 relE; mRNA interferase RelE/StbE C YafQ-dinJ C YoeB-YefM C HipA-HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD C Doc-Phd C HigB-HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D CTK_C18760 ftsZ; cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D CTK_C01600 mbl; MreB-like protein K03569 mreB; rod shape-determining protein MreB and related proteins D CTK_C24640 mreB; rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D CTK_C21740 gyrA; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D CTK_C21750 gyrB; DNA gyrase subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D CTK_C17530 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C CTK_C12000 iscS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C CTK_C16400 nifS; cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023