+E Ribosome biogenesis KO #

  Ribosome Biogenesis - Corynebacterium ulcerans 05146

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AEukaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B 90S particles C U3 small nucleolar RNA-associated proteins C Helicases C GTPase C RNase D Cul05146_1494 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] C Kinase C Other 90S particles B Pre-40S particles C Kinases C Export and cytoplasmic maturation factors C Other pre-40S particles B Pre-60S particles C Helicases C GTPases C RNases D Cul05146_1799 orn; Oligoribonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D RNase MRP C Kinases C Export and cytoplasmic maturation factors C 5-FMC complex C Ribosome quality control proteins C Other pre-60S particles B Other ribosome biogenesis factors C Cul05146_1683 era; GTPase Era K03595 era; GTPase C Cul05146_1744 obgE; GTPase Obg (GTP-binding protein Obg) K03979 obgE; GTPase [EC:3.6.5.-] # AProkaryotic type B Sno RNPs C Box C/D snoRNPs C Box H/ACA snoRNPs B rRNA transcription factors C Cul05146_1426 nusA; Transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA C Cul05146_1276 nusB; N utilization substance protein B-like (Protein NusB) K03625 nusB; transcription antitermination protein NusB C Cul05146_0382 nusG; Transcription termination/antitermination protein K02601 nusG; transcription termination/antitermination protein NusG B rRNA modification factors C 16S rRNA modification factors D Cul05146_0782 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Cul05146_1258 fmu; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Cul05146_1049 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Cul05146_1688 rmsE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Cul05146_2331 gidB; Ribosomal RNA small subunit methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Cul05146_1561 mraW; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Cul05146_0778 rsmI; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Cul05146_1094 tlyA; Hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] C 23S rRNA modification factors D Cul05146_0894 rrmA; Ribosomal RNA methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Cul05146_1945 SpoU rRNA Methylase family protein K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Cul05146_1453 rlmN; Dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Cul05146_1094 tlyA; Hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Cul05146_2223 rluC; Pseudouridine synthase K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Cul05146_1108 rluB; Pseudouridine synthase K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Cul05146_1537 rulD; Pseudouridine synthase K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] B ribosomal protein modification factors C Cul05146_0500 rimI; Ribosomal-protein-alanine N-acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] C Cul05146_1482 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM C Cul05146_1781 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor C Cul05146_1788 YcaO-like family protein K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor B rRNA processing factors C Cul05146_1494 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3] C Cul05146_1748 rne; Ribonuclease E K08300 rne; ribonuclease E [EC:3.1.26.12] C Cul05146_1286 Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] B rRNA helicases C Cul05146_0921 deaD; ATP-dependent RNA helicase K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] B GTPases C Cul05146_1683 era; GTPase Era K03595 era; GTPase C Cul05146_0621 rsgA; Ribosome biogenesis GTPase K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] C Cul05146_1110 engA; GTPase K03977 engA; GTPase C Cul05146_1744 obgE; GTPase Obg (GTP-binding protein Obg) K03979 obgE; GTPase [EC:3.6.5.-] C Cul05146_1383 hflX; GTPase HflX K03665 hflX; GTPase B Other maturation factors C Cul05146_0954 ywlC; tRNA threonylcarbamoyladenosine biosynthesis protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] C Cul05146_1305 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] C Cul05146_1421 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A C Cul05146_1427 rimP; Ribosome maturation factor RimP K09748 rimP; ribosome maturation factor RimP C Cul05146_0138 yaaA; Hypothetical protein K14761 rlbA; ribosome-associated protein C Cul05146_1737 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein C Cul05146_1686 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor C Cul05146_0851 ychF; Ribosome-binding ATPase K06942 ychF; ribosome-binding ATPase C Cul05146_1495 Hypothetical protein K07040 yceD; DUF177 domain-containing protein # ARelated small nucleolar RNAs B Box C/D snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for 2'-O-ribose methylation B Box H/ACA snoRNAs C SnoRNAs involved in processing reactions C SnoRNAs act as guides for pseudouridynation B Other snoRNA ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024