+D GENES KO #

  KEGG Orthology (KO) - Dechloromonas aromatica

% ! A09100 Metabolism B B 09101 Carbohydrate metabolism C 00010 Glycolysis / Gluconeogenesis [PATH:dar00010] D Daro_0592 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Daro_0581 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Daro_3204 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Daro_3589 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Daro_3628 D-fructose 1,6-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D Daro_3596 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Daro_3624 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Daro_0947 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Daro_3592 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Daro_3625 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Daro_3594 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Daro_0602 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Daro_0233 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Daro_2364 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Daro_2117 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Daro_3595 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Daro_1768 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Daro_0442 2-oxo-acid dehydrogenase E1 component homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Daro_0441 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_2840 Pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Daro_1348 Zinc-containing alcohol dehydrogenase superfamily K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Daro_1023 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Daro_1008 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Daro_1629 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_2708 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_1444 Phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Daro_3299 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Daro_2733 Aldose 1-epimerase K01792 E5.1.3.15; glucose-6-phosphate 1-epimerase [EC:5.1.3.15] D Daro_2068 Aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D Daro_0665 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] C 00020 Citrate cycle (TCA cycle) [PATH:dar00020] D Daro_2860 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Daro_2882 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Daro_3119 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Daro_3120 Isocitrate dehydrogenase NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Daro_2859 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Daro_2858 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_3363 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Daro_3364 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Daro_2807 Acetyl-CoA hydrolase/transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Daro_2863 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Daro_2862 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Daro_2865 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Daro_2864 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Daro_1777 succinate dehydrogenase subunit A K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D Daro_1776 succinate dehydrogenase subunit B K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D Daro_1778 Fumarate reductase respiratory complex, transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Daro_1627 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Daro_2935 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Daro_2867 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Daro_0665 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Daro_0442 2-oxo-acid dehydrogenase E1 component homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Daro_0441 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Daro_2840 Pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] C 00030 Pentose phosphate pathway [PATH:dar00030] D Daro_0581 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Daro_2070 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Daro_2071 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31] D Daro_2069 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Daro_3483 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Daro_3591 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Daro_3626 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Daro_2062 transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2] D Daro_3560 ribose-5-phosphate isomerase K01807 rpiA; ribose 5-phosphate isomerase A [EC:5.3.1.6] D Daro_2063 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 xfp; xylulose-5-phosphate/fructose-6-phosphate phosphoketolase [EC:4.1.2.9 4.1.2.22] D Daro_1444 Phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Daro_3299 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Daro_3730 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Daro_2068 Aldehyde dehydrogenase K00131 gapN; glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9] D Daro_2118 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Daro_3596 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Daro_3624 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Daro_3589 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Daro_3628 D-fructose 1,6-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D Daro_3204 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00040 Pentose and glucuronate interconversions [PATH:dar00040] D Daro_1284 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Daro_1735 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Daro_3483 ribulose-5-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1] D Daro_3336 L-fuculose 1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] C 00051 Fructose and mannose metabolism [PATH:dar00051] D Daro_0037 N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Daro_2389 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Daro_3299 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Daro_3336 L-fuculose 1-phosphate aldolase K01628 fucA; L-fuculose-phosphate aldolase [EC:4.1.2.17] D Daro_3204 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Daro_3589 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Daro_3628 D-fructose 1,6-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D Daro_3596 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Daro_3624 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Daro_0947 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Daro_4082 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] C 00052 Galactose metabolism [PATH:dar00052] D Daro_1236 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Daro_1255 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Daro_1259 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Daro_1735 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Daro_1444 Phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Daro_3299 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Daro_0592 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Daro_3204 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] C 00053 Ascorbate and aldarate metabolism [PATH:dar00053] D Daro_1284 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Daro_3930 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] C 00500 Starch and sucrose metabolism [PATH:dar00500] D Daro_1735 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Daro_1256 Nucleotidyl transferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Daro_0585 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] D Daro_0580 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21] D Daro_0586 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Daro_0582 Alpha-glucan phosphorylase K00688 PYG; glycogen phosphorylase [EC:2.4.1.1] D Daro_0583 alpha-amylase K22451 jgt; 4-alpha-glucanotransferase [EC:2.4.1.25] D Daro_1444 Phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Daro_3299 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Daro_0592 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Daro_0581 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Daro_0037 N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] C 00520 Amino sugar and nucleotide sugar metabolism [PATH:dar00520] D Daro_2034 Glycoside hydrolase, family 3, N-terminal K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Daro_2852 hypothetical protein K01233 csn; chitosanase [EC:3.2.1.132] D Daro_0037 N-acetylglucosamine kinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4] D Daro_3931 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Daro_0946 phosphoglucosamine mutase K03431 glmM; phosphoglucosamine mutase [EC:5.4.2.10] D Daro_0220 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Daro_1226 2-phosphoglycolate phosphatase, prokaryotic:HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 mupP; N-acetyl-D-muramate 6-phosphate phosphatase [EC:3.1.3.105] D Daro_3660 Aminoglycoside phosphotransferase K07102 amgK; N-acetylmuramate 1-kinase [EC:2.7.1.221] D Daro_3661 Nucleotidyl transferase K00992 murU; N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase [EC:2.7.7.99] D Daro_3393 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Daro_0044 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Daro_1265 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Daro_2402 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Daro_2440 UDP-glucose/GDP-mannose dehydrogenase:6-phosphogluconate dehydrogenase, NAD-binding protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] D Daro_1264 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Daro_1246 surface polysaccharide biosynthesis protein, transferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Daro_0592 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Daro_1444 Phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Daro_3299 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Daro_1735 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Daro_1284 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Daro_1236 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Daro_1255 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Daro_1259 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Daro_3930 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Daro_4082 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Daro_0581 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Daro_2389 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Daro_1256 Nucleotidyl transferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Daro_1257 NAD-dependent epimerase/dehydratase:Polysaccharide biosynthesis protein CapD K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Daro_0279 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Daro_0368 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Daro_3237 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Daro_0585 Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27] C 00620 Pyruvate metabolism [PATH:dar00620] D Daro_1629 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_2708 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_2840 Pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Daro_0442 2-oxo-acid dehydrogenase E1 component homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Daro_0441 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_2096 Formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Daro_3239 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Daro_3807 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_3783 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_0906 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_1355 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_1348 Zinc-containing alcohol dehydrogenase superfamily K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Daro_1023 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Daro_2099 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_0974 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_2921 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_0975 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Daro_2098 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Daro_2117 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Daro_3595 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Daro_0844 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Daro_3939 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Daro_3938 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Daro_0872 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Daro_1185 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Daro_1008 Aldehyde dehydrogenase K00138 aldB; aldehyde dehydrogenase [EC:1.2.1.-] D Daro_2807 Acetyl-CoA hydrolase/transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Daro_0457 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D Daro_0268 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal K00102 LDHD; D-lactate dehydrogenase (cytochrome) [EC:1.1.2.4] D Daro_1763 4Fe-4S ferredoxin, iron-sulfur binding:FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal K18930 dld; D-lactate dehydrogenase D Daro_3539 Glyoxalase I K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Daro_0300 lactoylglutathione lyase K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5] D Daro_1595 Beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Daro_0841 Beta-lactamase-like protein K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6] D Daro_3943 allosteric NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Daro_0666 Phosphate acetyl/butaryl transferase:Malic enzyme, N-terminal:Malic enzyme, NAD-binding protein K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40] D Daro_2867 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Daro_1627 fumarase K01676 E4.2.1.2A; fumarate hydratase, class I [EC:4.2.1.2] D Daro_2935 fumarase K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2] D Daro_1777 succinate dehydrogenase subunit A K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D Daro_1776 succinate dehydrogenase subunit B K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D Daro_1778 Fumarate reductase respiratory complex, transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Daro_1759 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Daro_0665 Phosphoenolpyruvate carboxykinase (GTP) K01596 E4.1.1.32; phosphoenolpyruvate carboxykinase (GTP) [EC:4.1.1.32] D Daro_1768 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Daro_3101 Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0511 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Daro_3071 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Daro_1398 Pyruvate carboxyltransferase K02594 nifV; homocitrate synthase NifV [EC:2.3.3.14] C 00630 Glyoxylate and dicarboxylate metabolism [PATH:dar00630] D Daro_3098 isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1] D Daro_1629 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_2708 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_3101 Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9] D Daro_2867 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Daro_2860 citrate synthase K01647 CS; citrate synthase [EC:2.3.3.1] D Daro_2882 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1609 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D Daro_1610 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D Daro_3467 MaoC-like dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Daro_4003 Acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] D Daro_4004 propionyl-CoA carboxylase carboxyltransferase subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D Daro_4006 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Daro_3315 FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal K00104 glcD; glycolate dehydrogenase FAD-linked subunit [EC:1.1.99.14] D Daro_3314 FAD linked oxidase, N-terminal K11472 glcE; glycolate dehydrogenase FAD-binding subunit [EC:1.1.99.14] D Daro_3313 4Fe-4S ferredoxin, iron-sulfur binding:Protein of unknown function DUF224, cysteine-rich region K11473 glcF; glycolate dehydrogenase iron-sulfur subunit [EC:1.1.99.14] D Daro_0523 Catalase, N-terminal K03781 katE; catalase [EC:1.11.1.6] D Daro_0672 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Daro_3482 phosphoglycolate phosphatase K01091 gph; phosphoglycolate phosphatase [EC:3.1.3.18] D Daro_3637 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit K01601 rbcL; ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] D Daro_0077 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_3763 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_0603 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Daro_2465 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Daro_2463 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_2464 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Daro_1809 Glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Daro_3317 Xylose isomerase-like TIM barrel K01816 hyi; hydroxypyruvate isomerase [EC:5.3.1.22] D Daro_3340 NADP oxidoreductase, coenzyme F420-dependent:6-phosphogluconate dehydrogenase, NAD-binding protein K00042 garR; 2-hydroxy-3-oxopropionate reductase [EC:1.1.1.60] D Daro_2118 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Daro_1818 formate dehydrogenase (quinone-dependent) catalytic subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Daro_1819 formate dehydrogenase (quinone-dependent) catalytic subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Daro_1817 formate dehydrogenase (quinone-dependent) iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Daro_1816 formate dehydrogenase (quinone-dependent) cytochrome b subunit K00127 fdoI; formate dehydrogenase subunit gamma D Daro_3444 LipQ K01432 AFMID; arylformamidase [EC:3.5.1.9] D Daro_0056 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] C 00640 Propanoate metabolism [PATH:dar00640] D Daro_1629 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_2708 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_1204 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Daro_0457 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] D Daro_2099 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_0974 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_2921 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_0975 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Daro_2098 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_2096 Formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Daro_0096 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Daro_0359 Zinc-containing alcohol dehydrogenase superfamily K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Daro_1526 Zinc-containing alcohol dehydrogenase superfamily K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Daro_1202 Zinc-containing alcohol dehydrogenase superfamily K19745 acuI; acrylyl-CoA reductase (NADPH) [EC:1.3.1.-] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Daro_0844 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Daro_3939 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Daro_3938 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Daro_0872 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Daro_1774 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] D Daro_4003 Acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] D Daro_4004 propionyl-CoA carboxylase carboxyltransferase subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D Daro_4006 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Daro_3364 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Daro_3363 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Daro_2882 aconitase K01682 acnB; aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:4.2.1.3 4.2.1.99] D Daro_2158 Iron-containing alcohol dehydrogenase K08325 yqhD; NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] C 00650 Butanoate metabolism [PATH:dar00650] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0372 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Daro_1549 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0096 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Daro_3239 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Daro_3807 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_3783 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_0906 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_1355 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_3467 MaoC-like dehydratase K17865 croR; 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] D Daro_0104 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D Daro_1608 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D Daro_0993 Alpha/beta hydrolase fold:Poly-beta-hydroxybutyrate polymerase, N-terminal K03821 phaC; poly[(R)-3-hydroxyalkanoate] polymerase subunit PhaC [EC:2.3.1.304] D Daro_1609 3-oxoacyl-[acyl-carrier-protein] reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D Daro_1610 Acetoacetyl-CoA reductase K00023 phbB; acetoacetyl-CoA reductase [EC:1.1.1.36] D Daro_2863 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Daro_2862 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Daro_2865 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Daro_2864 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Daro_1777 succinate dehydrogenase subunit A K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D Daro_1776 succinate dehydrogenase subunit B K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D Daro_1778 Fumarate reductase respiratory complex, transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Daro_3748 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Daro_0671 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Daro_2807 Acetyl-CoA hydrolase/transferase K18118 aarC; succinyl-CoA:acetate CoA-transferase [EC:2.8.3.18] D Daro_2096 Formate acetyltransferase K00656 E2.3.1.54; formate C-acetyltransferase [EC:2.3.1.54] D Daro_2840 Pyruvate:ferredoxin (flavodoxin) oxidoreductase K03737 por; pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:1.2.7.1 1.2.7.-] D Daro_0086 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Daro_1021 butyryl-CoA:acetate CoA transferase K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5] D Daro_0177 Acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D Daro_1620 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Daro_3075 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Daro_1619 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Daro_3074 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] C 00660 C5-Branched dibasic acid metabolism [PATH:dar00660] D Daro_1620 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Daro_3075 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Daro_1619 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Daro_3074 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Daro_3364 succinyl-CoA synthetase (ADP-forming) beta subunit K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5] D Daro_3363 succinyl-CoA synthetase (ADP-forming) alpha subunit K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5] D Daro_0861 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Daro_0863 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Daro_0864 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Daro_3775 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] C 00562 Inositol phosphate metabolism [PATH:dar00562] D Daro_1681 Inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Daro_0947 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] B B 09102 Energy metabolism C 00190 Oxidative phosphorylation [PATH:dar00190] D Daro_0949 NADH dehydrogenase subunit A K00330 nuoA; NADH-quinone oxidoreductase subunit A [EC:7.1.1.2] D Daro_0950 NADH dehydrogenase subunit B K00331 nuoB; NADH-quinone oxidoreductase subunit B [EC:7.1.1.2] D Daro_0951 NADH dehydrogenase subunit C K00332 nuoC; NADH-quinone oxidoreductase subunit C [EC:7.1.1.2] D Daro_0952 NADH dehydrogenase subunit D K00333 nuoD; NADH-quinone oxidoreductase subunit D [EC:7.1.1.2] D Daro_0953 NADH dehydrogenase subunit E K00334 nuoE; NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] D Daro_0954 NADH dehydrogenase subunit F K00335 nuoF; NADH-quinone oxidoreductase subunit F [EC:7.1.1.2] D Daro_0955 NADH dehydrogenase subunit G K00336 nuoG; NADH-quinone oxidoreductase subunit G [EC:7.1.1.2] D Daro_0956 NADH dehydrogenase subunit H K00337 nuoH; NADH-quinone oxidoreductase subunit H [EC:7.1.1.2] D Daro_0957 NADH dehydrogenase subunit I K00338 nuoI; NADH-quinone oxidoreductase subunit I [EC:7.1.1.2] D Daro_0958 NADH dehydrogenase subunit J K00339 nuoJ; NADH-quinone oxidoreductase subunit J [EC:7.1.1.2] D Daro_0959 NADH dehydrogenase subunit K K00340 nuoK; NADH-quinone oxidoreductase subunit K [EC:7.1.1.2] D Daro_0960 NADH dehydrogenase subunit L K00341 nuoL; NADH-quinone oxidoreductase subunit L [EC:7.1.1.2] D Daro_0564 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Daro_0568 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Daro_0961 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Daro_0567 NADH dehydrogenase subunit M K00342 nuoM; NADH-quinone oxidoreductase subunit M [EC:7.1.1.2] D Daro_0962 NADH dehydrogenase subunit N K00343 nuoN; NADH-quinone oxidoreductase subunit N [EC:7.1.1.2] D Daro_2863 succinate dehydrogenase subunit A K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1] D Daro_2862 succinate dehydrogenase subunit B K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1] D Daro_2865 succinate dehydrogenase subunit C K00241 sdhC; succinate dehydrogenase cytochrome b subunit D Daro_2864 succinate dehydrogenase subunit D K00242 sdhD; succinate dehydrogenase membrane anchor subunit D Daro_1777 succinate dehydrogenase subunit A K00233 frdA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1 7.1.1.12] D Daro_1776 succinate dehydrogenase subunit B K25995 frdB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1 7.1.1.12] D Daro_1778 Fumarate reductase respiratory complex, transmembrane subunit K25996 frdC; succinate dehydrogenase subunit C D Daro_0809 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Daro_0810 Cytochrome b/b6, N-terminal:Cytochrome b/b6, C-terminal K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Daro_0811 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Daro_1463 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Daro_1467 cytochrome c oxidase, subunit III K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Daro_1065 putative denitrification protein NorE K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Daro_0445 putative denitrification protein NorE K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9] D Daro_1470 Cytochrome c oxidase, subunit I K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9] D Daro_1471 Cytochrome c oxidase, subunit II:Cytochrome c, class I:Cytochrome C oxidase subunit II, transmembrane region K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9] D Daro_1468 Cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D Daro_1462 Cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Daro_0713 Cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Daro_0714 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Daro_0715 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Daro_0716 Cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Daro_1584 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_2126 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_3321 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_0692 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_1006 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_1570 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_0304 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_1022 cytochrome c-552 precursor K08738 CYC; cytochrome c D Daro_1401 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_3346 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_4112 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Daro_4114 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Daro_4113 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Daro_4111 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Daro_4115 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Daro_4108 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Daro_4110 ATP synthase F0, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Daro_4109 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Daro_1289 Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1] D Daro_2824 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Daro_0434 Protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] C 00195 Photosynthesis C 00196 Photosynthesis - antenna proteins C 00710 Carbon fixation in photosynthetic organisms C 00720 Carbon fixation pathways in prokaryotes C 00680 Methane metabolism [PATH:dar00680] D Daro_1818 formate dehydrogenase (quinone-dependent) catalytic subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Daro_1819 formate dehydrogenase (quinone-dependent) catalytic subunit K00123 fdoG; formate dehydrogenase major subunit [EC:1.17.1.9] D Daro_1817 formate dehydrogenase (quinone-dependent) iron-sulfur subunit K00124 fdoH; formate dehydrogenase iron-sulfur subunit D Daro_1816 formate dehydrogenase (quinone-dependent) cytochrome b subunit K00127 fdoI; formate dehydrogenase subunit gamma D Daro_0603 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Daro_0672 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Daro_2118 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Daro_2364 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Daro_1759 Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31] D Daro_2867 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Daro_3596 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Daro_3624 fructose-bisphosphate aldolase K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13] D Daro_3589 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Daro_3628 D-fructose 1,6-bisphosphatase K01086 fbp-SEBP; fructose-1,6-bisphosphatase I / sedoheptulose-1,7-bisphosphatase [EC:3.1.3.11 3.1.3.37] D Daro_3204 pyrophosphate-dependent phosphofructokinase K21071 pfk; ATP-dependent phosphofructokinase / diphosphate-dependent phosphofructokinase [EC:2.7.1.11 2.7.1.90] D Daro_2280 Tetrahydromethanopterin S-methyltransferase, subunit A K00577 mtrA; tetrahydromethanopterin S-methyltransferase subunit A [EC:7.2.1.4] D Daro_2099 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_0974 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_2921 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_0975 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Daro_2098 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Daro_1629 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_2708 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_1768 phosphoenolpyruvate synthase K01007 pps; pyruvate, water dikinase [EC:2.7.9.2] D Daro_0602 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Daro_0233 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Daro_1231 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Daro_0984 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Daro_1962 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Daro_0057 phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D Daro_4162 2-phosphosulfolactate phosphatase K05979 comB; 2-phosphosulfolactate phosphatase [EC:3.1.3.71] C 00910 Nitrogen metabolism [PATH:dar00910] D Daro_0825 Nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Daro_0830 Twin-arginine translocation pathway signal K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D Daro_0831 Nitrate transport permease K15577 nrtB; nitrate/nitrite transport system permease protein D Daro_0832 Nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D Daro_3515 periplasmic nitrate reductase subunit NapA apoprotein K02567 napA; nitrate reductase (cytochrome) [EC:1.9.6.1] D Daro_3514 periplasmic nitrate reductase subunit NapB K02568 napB; nitrate reductase (cytochrome), electron transfer subunit D Daro_0814 assimilatory nitrate reductase (NADH) alpha subunit apoprotein K00372 nasC; assimilatory nitrate reductase catalytic subunit [EC:1.7.99.-] D Daro_0816 assimilatory nitrite reductase (NAD(P)H) large subunit precursor K26139 nasD; nitrite reductase [NAD(P)H] large subunit [EC:1.7.1.4] D Daro_0817 assimilatory nitrite reductase (NAD(P)H) small subunit K26138 nasE; nitrite reductase [NAD(P)H] small subunit [EC:1.7.1.4] D Daro_3274 dissimilatory nitrite reductase (NO-forming), cytochrome cd1 type apoprotein K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1] D Daro_3323 dissimilatory nitrite reductase (NO-forming), cytochrome cd1 type apoprotein K15864 nirS; nitrite reductase (NO-forming) / hydroxylamine reductase [EC:1.7.2.1 1.7.99.1] D Daro_3191 nitric oxide reductase, NorB subunit apoprotein K04561 norB; nitric oxide reductase subunit B [EC:1.7.2.5] D Daro_3190 nitric oxide reductase, NorC subunit apoprotein K02305 norC; nitric oxide reductase subunit C D Daro_1571 nitrous oxide reductase apoprotein K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D Daro_1575 nitrous oxide reductase apoprotein K00376 nosZ; nitrous-oxide reductase [EC:1.7.2.4] D Daro_1414 Mo-nitrogenase MoFe protein subunit NifD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Daro_1413 Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Daro_1415 Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH D Daro_1554 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Daro_2873 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Daro_3243 2-nitropropane dioxygenase, NPD K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16] D Daro_3329 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Daro_2721 Glu/Leu/Phe/Val dehydrogenase, C terminal:Glu/Leu/Phe/Val dehydrogenase, dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Daro_0077 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_3763 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_0217 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Daro_0218 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Daro_1442 Cyanase K01725 cynS; cyanate lyase [EC:4.2.1.104] D Daro_2091 Carbonic anhydrase, prokaryotic and plant K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D Daro_0099 GCN5-related N-acetyltransferase:Carbonic anhydrase, prokaryotic and plant K01673 cynT; carbonic anhydrase [EC:4.2.1.1] D Daro_3922 Carbonic anhydrase, eukaryotic K01674 cah; carbonic anhydrase [EC:4.2.1.1] C 00920 Sulfur metabolism [PATH:dar00920] D Daro_3693 Thiosulphate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D Daro_2134 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Daro_3692 Sulphate transport system permease protein 2:Sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Daro_3691 Sulphate transport system permease protein 2:Sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Daro_3690 Sulphate transport system permease protein 1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Daro_2945 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Daro_2944 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Daro_2914 phosphoadenylylsulfate reductase (thioredoxin) K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10] D Daro_3130 diheme cytochrome SoxA (sulfur oxidation) K17222 soxA; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D Daro_3129 monoheme cytochrome SoxX (sulfur oxidation) K17223 soxX; L-cysteine S-thiosulfotransferase [EC:2.8.5.2] D Daro_1025 conserved hypothetical protein K17226 soxY; sulfur-oxidizing protein SoxY D Daro_3132 thiosulfate-binding protein SoxY K17226 soxY; sulfur-oxidizing protein SoxY D Daro_3091 conserved hypothetical transmembrane protein K17226 soxY; sulfur-oxidizing protein SoxY D Daro_3131 sulfur compound chelating protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D Daro_3092 sulfur compound chelating protein SoxZ K17227 soxZ; sulfur-oxidizing protein SoxZ D Daro_3128 sulfate thiol esterase SoxB K17224 soxB; S-sulfosulfanyl-L-cysteine sulfohydrolase [EC:3.1.6.20] D Daro_3134 sulfur dehydrogenase subunit SoxC K17225 soxC; sulfane dehydrogenase subunit SoxC D Daro_3133 sulfur dehydrogenase subunit SoxD K22622 soxD; S-disulfanyl-L-cysteine oxidoreductase SoxD [EC:1.8.2.6] D Daro_2912 sulfite reductase (NADPH) beta subunit K00381 cysI; sulfite reductase (NADPH) hemoprotein beta-component [EC:1.8.1.2] D Daro_3137 sulfide dehydrogenase (flavocytochrome), flavoprotein subunit K17229 fccB; sulfide dehydrogenase [flavocytochrome c] flavoprotein chain [EC:1.8.2.3] D Daro_3136 Cytochrome c, class I K17230 fccA; cytochrome subunit of sulfide dehydrogenase D Daro_3055 Rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Daro_1458 thiosulfate sulfurtransferase K02439 glpE; thiosulfate sulfurtransferase [EC:2.8.1.1] D Daro_1397 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Daro_1947 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Daro_2138 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Daro_4128 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Daro_0130 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Daro_0877 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Daro_3818 toluene 4-monooxygenase protein C K15762 tmoC; toluene monooxygenase system ferredoxin subunit D Daro_3815 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K15765 tmoF; toluene monooxygenase electron transfer component [EC:1.18.1.3] D Daro_0226 AMP-dependent synthetase and ligase K20034 dmdB; 3-(methylthio)propionyl---CoA ligase [EC:6.2.1.44] D Daro_1555 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D Daro_1215 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] D Daro_0227 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region K20035 dmdC; 3-(methylsulfanyl)propanoyl-CoA dehydrogenase [EC:1.3.99.41] B B 09103 Lipid metabolism C 00061 Fatty acid biosynthesis [PATH:dar00061] D Daro_0844 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15] D Daro_3939 biotin carboxyl carrier protein K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein D Daro_3938 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14] D Daro_0872 acetyl-CoA carboxylase carboxyltransferase subunit alpha K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15] D Daro_2018 Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein D Daro_1945 putative acyl-carrier-protein K02078 acpP; acyl carrier protein D Daro_4171 acyl carrier protein K02078 acpP; acyl carrier protein D Daro_1173 Phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D Daro_2433 conserved hypothetical protein K02078 acpP; acyl carrier protein D Daro_2373 acyl carrier protein K02078 acpP; acyl carrier protein D Daro_4169 Phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D Daro_2016 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Daro_4014 Acyl transferase region K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Daro_2015 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Daro_2368 conserved hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Daro_4185 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Daro_2374 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Daro_2019 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Daro_4170 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Daro_1172 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Daro_2017 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Daro_4188 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Daro_1753 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Daro_4174 conserved hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Daro_0978 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Daro_1935 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Daro_2355 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_1553 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_0249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] C 00062 Fatty acid elongation C 00071 Fatty acid degradation [PATH:dar00071] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_2352 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_1550 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_1549 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Daro_0096 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Daro_2353 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Daro_1544 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, N-terminal K06445 fadE; acyl-CoA dehydrogenase [EC:1.3.99.-] D Daro_0539 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Daro_2355 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_1553 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_0249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_0402 AMP-dependent synthetase and ligase:Phospholipid/glycerol acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D Daro_1348 Zinc-containing alcohol dehydrogenase superfamily K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00073 Cutin, suberine and wax biosynthesis C 00100 Steroid biosynthesis C 00120 Primary bile acid biosynthesis C 00121 Secondary bile acid biosynthesis C 00140 Steroid hormone biosynthesis C 00561 Glycerolipid metabolism [PATH:dar00561] D Daro_2118 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Daro_1922 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Daro_2014 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Daro_0533 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Daro_3537 Phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Daro_3933 lyso-ornithine lipid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Daro_0472 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Daro_3544 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Daro_3547 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00564 Glycerophospholipid metabolism [PATH:dar00564] D Daro_0615 glycerol 3-phosphate dehydrogenase (NAD(P)+) K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] D Daro_1921 Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal:FAD dependent oxidoreductase K00111 glpA; glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] D Daro_0533 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Daro_3537 Phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Daro_3933 lyso-ornithine lipid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Daro_0472 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Daro_3544 diacylglycerol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107] D Daro_0392 Phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D Daro_0396 Phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D Daro_2090 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Daro_0237 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Daro_3305 Glycerophosphoryl diester phosphodiesterase K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] D Daro_0402 AMP-dependent synthetase and ligase:Phospholipid/glycerol acyltransferase K05939 aas; acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase [EC:2.3.1.40 6.2.1.20] D Daro_1747 Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41] D Daro_3072 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Daro_2876 Phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65] D Daro_3741 phosphatidylglycerophosphatase K01095 pgpA; phosphatidylglycerophosphatase A [EC:3.1.3.27] D Daro_2081 Phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Daro_3768 Phospholipase D/Transphosphatidylase K06131 clsA_B; cardiolipin synthase A/B [EC:2.7.8.-] D Daro_2039 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K08744 CRLS; cardiolipin synthase (CMP-forming) [EC:2.7.8.41] C 00565 Ether lipid metabolism [PATH:dar00565] D Daro_2090 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Daro_0392 Phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D Daro_0396 Phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] C 00600 Sphingolipid metabolism C 00590 Arachidonic acid metabolism D Daro_2090 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00591 Linoleic acid metabolism D Daro_2090 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] C 00592 alpha-Linolenic acid metabolism [PATH:dar00592] D Daro_2090 Phospholipase A1 K01058 pldA; phospholipase A1/A2 [EC:3.1.1.32 3.1.1.4] D Daro_2352 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_1550 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01040 Biosynthesis of unsaturated fatty acids [PATH:dar01040] D Daro_2714 Lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Daro_0349 Thioesterase superfamily K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] B B 09104 Nucleotide metabolism C 00230 Purine metabolism [PATH:dar00230] D Daro_0963 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Daro_1444 Phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Daro_3299 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Daro_3730 Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1] D Daro_0876 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Daro_3668 phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13] D Daro_3161 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Daro_3552 formate-dependent phosphoribosylglycinamide formyltransferase K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21] D Daro_1925 phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] D Daro_3174 phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] D Daro_0451 5-(carboxyamino)imidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18] D Daro_0449 5-(carboxyamino)imidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18] D Daro_3640 SAICAR synthetase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] D Daro_3288 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Daro_3667 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Daro_2524 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Daro_3029 Protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Daro_1605 Protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Daro_1736 Phosphoribosyltransferase K00760 hprT; hypoxanthine phosphoribosyltransferase [EC:2.4.2.8] D Daro_2338 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Daro_2989 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Daro_3852 Ham1-like protein K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66] D Daro_2337 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Daro_1731 Cytidine/deoxycytidylate deaminase, zinc-binding region K01487 guaD; guanine deaminase [EC:3.5.4.3] D Daro_3845 guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8] D Daro_0964 Ribonucleotide reductase large subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Daro_1938 Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1] D Daro_3843 RelA/SpoT protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Daro_1205 Ppx/GppA phosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] D Daro_2827 RelA/SpoT protein K00951 relA; GTP pyrophosphokinase [EC:2.7.6.5] D Daro_1897 Metal-dependent phosphohydrolase, HD subdomain:CHASE2 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Daro_3414 Adenylyl cyclase class-3/4/guanylyl cyclase K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Daro_1993 CHASE2:Stage II sporulation E K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Daro_4144 Forkhead-associated K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1] D Daro_2974 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Daro_3935 PfkB K00856 ADK; adenosine kinase [EC:2.7.1.20] D Daro_3205 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Daro_3932 Bis(5'nucleosyl)-tetraphosphatase, ApaH K01525 apaH; bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] D Daro_2945 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Daro_2944 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Daro_1427 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Daro_1428 Urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Daro_1429 Urease, gamma subunit region K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00240 Pyrimidine metabolism [PATH:dar00240] D Daro_0939 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Daro_0938 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Daro_3890 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Daro_0506 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Daro_3889 dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3] D Daro_2839 Dihydroorotate dehydrogenase K00226 pyrD; dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] D Daro_1164 dihydroorotate oxidase A K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2] D Daro_0122 orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10] D Daro_3450 Orotidine 5'-phosphate decarboxylase subfamily 2 K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] D Daro_1744 uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22] D Daro_2989 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Daro_0172 Maf-like protein K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-] D Daro_1134 conserved hypothetical protein K07043 upp; UTP pyrophosphatase [EC:3.6.1.-] D Daro_2366 CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2] D Daro_2524 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Daro_3029 Protein of unknown function DUF1255 K09913 ppnP; purine/pyrimidine-nucleoside phosphorylase [EC:2.4.2.1 2.4.2.2] D Daro_3891 Phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Daro_0577 dCTP deaminase K01494 dcd; dCTP deaminase [EC:3.5.4.13] D Daro_0964 Ribonucleotide reductase large subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] D Daro_2197 thymidylate kinase K00943 tmk; dTMP kinase [EC:2.7.4.9] D Daro_3140 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Daro_0593 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] B B 09105 Amino acid metabolism C 00250 Alanine, aspartate and glutamate metabolism [PATH:dar00250] D Daro_2021 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Daro_2408 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Daro_2428 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Daro_1275 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Daro_2387 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Daro_2145 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Daro_0481 Aspartate ammonia-lyase K01744 aspA; aspartate ammonia-lyase [EC:4.3.1.1] D Daro_3031 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Daro_3681 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Daro_2974 Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4] D Daro_3288 Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2] D Daro_3890 aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] D Daro_3748 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Daro_0671 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Daro_0217 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Daro_0218 glutamate synthase (NADH) small subunit K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13] D Daro_2721 Glu/Leu/Phe/Val dehydrogenase, C terminal:Glu/Leu/Phe/Val dehydrogenase, dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Daro_0077 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_3763 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_0939 carbamoyl-phosphate synthase large subunit K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] D Daro_0938 carbamoyl-phosphate synthase small subunit K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] D Daro_3931 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Daro_0876 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] C 00260 Glycine, serine and threonine metabolism [PATH:dar00260] D Daro_2515 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Daro_0865 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Daro_2386 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Daro_0166 homoserine kinase K02204 thrB2; homoserine kinase type II [EC:2.7.1.39] D Daro_0057 phosphoserine phosphatase K02203 thrH; phosphoserine / homoserine phosphotransferase [EC:3.1.3.3 2.7.1.39] D Daro_2382 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] D Daro_0603 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Daro_0672 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region:D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein K00018 hprA; glycerate dehydrogenase [EC:1.1.1.29] D Daro_2118 glycerate 2-kinase K11529 gck; glycerate 2-kinase [EC:2.7.1.165] D Daro_0602 phosphoglycerate mutase K15634 gpmB; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11] D Daro_0233 phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12] D Daro_1231 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Daro_0984 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Daro_1962 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] D Daro_2465 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Daro_2463 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_2464 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Daro_1809 Glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein D Daro_3072 CDP-diacylglycerol--serine O-phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8] D Daro_4123 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Daro_0871 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Daro_0870 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Daro_3711 Tryptophan synthase, beta chain-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] C 00270 Cysteine and methionine metabolism [PATH:dar00270] D Daro_1397 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Daro_1947 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Daro_2138 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Daro_4128 cysteine synthase K01738 cysK; cysteine synthase [EC:2.5.1.47] D Daro_4129 Aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Daro_0046 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Daro_0188 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Daro_0026 S-adenosylmethionine decarboxylase related protein K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_3735 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_1722 Spermidine synthase-like protein K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_0836 conserved hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_1605 Protein of unknown function DUF152 K05810 LACC1; purine-nucleoside/S-methyl-5'-thioadenosine phosphorylase / adenosine deaminase [EC:2.4.2.1 2.4.2.28 3.5.4.4] D Daro_1229 Amidohydrolase:Amidohydrolase-like protein K12960 mtaD; 5-methylthioadenosine/S-adenosylhomocysteine deaminase [EC:3.5.4.31 3.5.4.28] D Daro_1738 methylthioadenosine phosphorylase K19696 mtiP; 5'-methylthioinosine phosphorylase [EC:2.4.2.44] D Daro_3335 methylthioribose-1-phosphate isomerase K08963 mtnA; methylthioribose-1-phosphate isomerase [EC:5.3.1.23] D Daro_2002 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Daro_3525 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Daro_0186 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Daro_2515 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Daro_0865 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Daro_2386 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Daro_0130 homoserine O-acetyltransferase K00641 metX; homoserine O-acetyltransferase/O-succinyltransferase [EC:2.3.1.31 2.3.1.46] D Daro_2851 O-acetylhomoserine sulfhydrolase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49] D Daro_0877 O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-] D Daro_3294 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_4078 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_0011 Glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Daro_0010 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Daro_3055 Rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Daro_2867 malate dehydrogenase (NAD) K00024 mdh; malate dehydrogenase [EC:1.1.1.37] D Daro_1287 cysteine synthase K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144] D Daro_1231 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Daro_0984 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00280 Valine, leucine and isoleucine degradation [PATH:dar00280] D Daro_3294 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_4078 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0096 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Daro_2353 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00249 ACADM; acyl-CoA dehydrogenase [EC:1.3.8.7] D Daro_0100 isovaleryl-CoA dehydrogenase K00253 IVD; isovaleryl-CoA dehydrogenase [EC:1.3.8.4] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Daro_2352 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_1550 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_4003 Acetyl-CoA carboxylase, biotin carboxylase K01965 PCCA; propionyl-CoA carboxylase alpha chain [EC:6.4.1.3] D Daro_4004 propionyl-CoA carboxylase carboxyltransferase subunit K01966 PCCB; propionyl-CoA carboxylase beta chain [EC:6.4.1.3 2.1.3.15] D Daro_4006 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Daro_0089 3-methylcrotonoyl-CoA carboxylase, alpha subunit K01968 MCCC1; 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] D Daro_0092 Carboxyl transferase K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] D Daro_0090 Enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D Daro_0383 Enoyl-CoA hydratase/isomerase K13766 liuC; methylglutaconyl-CoA hydratase [EC:4.2.1.18] D Daro_0086 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Daro_1021 butyryl-CoA:acetate CoA transferase K01027 OXCT; 3-oxoacid CoA-transferase [EC:2.8.3.5] D Daro_0177 Acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00290 Valine, leucine and isoleucine biosynthesis [PATH:dar00290] D Daro_4123 L-threonine ammonia-lyase K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19] D Daro_0861 3-isopropylmalate dehydratase, large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] D Daro_0863 3-isopropylmalate dehydratase, small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35] D Daro_0864 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Daro_3775 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85] D Daro_1620 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Daro_3075 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Daro_1619 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Daro_3074 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Daro_3073 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Daro_0302 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Daro_3294 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_4078 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_2387 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Daro_0511 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] D Daro_3071 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13] C 00300 Lysine biosynthesis [PATH:dar00300] D Daro_2386 homoserine dehydrogenase K00003 hom; homoserine dehydrogenase [EC:1.1.1.3] D Daro_2515 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Daro_0865 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Daro_0846 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Daro_0936 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] D Daro_1726 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117] D Daro_1679 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Daro_3033 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Daro_1727 succinyldiaminopimelate aminotransferase apoenzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Daro_1724 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Daro_0192 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Daro_1645 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Daro_0207 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Daro_2435 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Daro_3502 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Daro_3503 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10] C 00310 Lysine degradation [PATH:dar00310] D Daro_2858 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0539 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_3748 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Daro_0671 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Daro_0290 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00220 Arginine biosynthesis [PATH:dar00220] D Daro_3032 ornithine carbamoyltransferase K00611 OTC; ornithine carbamoyltransferase [EC:2.1.3.3] D Daro_3031 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Daro_3681 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Daro_2468 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D Daro_0074 Allophanate hydrolase subunit 2 K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6] D Daro_0075 Amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D Daro_1427 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Daro_1428 Urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Daro_1429 Urease, gamma subunit region K01430 ureA; urease subunit gamma [EC:3.5.1.5] D Daro_0077 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_3763 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_2721 Glu/Leu/Phe/Val dehydrogenase, C terminal:Glu/Leu/Phe/Val dehydrogenase, dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Daro_2387 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Daro_3439 GCN5-related N-acetyltransferase K00619 argA; amino-acid N-acetyltransferase [EC:2.3.1.1] D Daro_3584 N-acetylglutamate synthase K14682 argAB; amino-acid N-acetyltransferase [EC:2.3.1.1] D Daro_3487 glutamate N-acetyltransferase K00620 argJ; glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] D Daro_0629 N-acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8] D Daro_1863 N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] D Daro_1679 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Daro_3033 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] C 00330 Arginine and proline metabolism [PATH:dar00330] D Daro_0078 Creatininase K01470 E3.5.2.10; creatinine amidohydrolase [EC:3.5.2.10] D Daro_0578 ornithine decarboxylase K01584 adiA; arginine decarboxylase [EC:4.1.1.19] D Daro_0026 S-adenosylmethionine decarboxylase related protein K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_3735 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_1722 Spermidine synthase-like protein K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_0836 conserved hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_1360 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Daro_2468 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D Daro_3885 pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2] D Daro_3473 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Daro_0540 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] D Daro_1698 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Daro_1031 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Daro_0290 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] C 00340 Histidine metabolism [PATH:dar00340] D Daro_3388 ATP phosphoribosyltransferase (homohexameric) K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17] D Daro_2975 tRNA synthetase, class II (G, H, P and S) K02502 hisZ; ATP phosphoribosyltransferase regulatory subunit D Daro_3377 phosphoribosyl-ATP pyrophosphatase K01523 hisE; phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31] D Daro_3378 phosphoribosyl-AMP cyclohydrolase K01496 hisI; phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] D Daro_3380 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16] D Daro_3381 imidazole glycerol phosphate synthase subunit hisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10] D Daro_3379 imidazole glycerol phosphate synthase subunit hisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10] D Daro_3382 imidazoleglycerol-phosphate dehydratase K01693 hisB; imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19] D Daro_1233 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_3383 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_3387 histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23] C 00350 Tyrosine metabolism [PATH:dar00350] D Daro_1233 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_3383 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_2002 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Daro_1348 Zinc-containing alcohol dehydrogenase superfamily K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Daro_2149 5-carboxymethyl-2-hydroxymuconate isomerase K01826 hpaF; 5-carboxymethyl-2-hydroxymuconate isomerase [EC:5.3.3.10] D Daro_3804 2,4-dihydroxyhept-2-enedioate aldolase K02510 hpaI; 4-hydroxy-2-oxoheptanedioate aldolase [EC:4.1.2.52] D Daro_3748 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Daro_0671 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Daro_3368 Fumarylacetoacetate (FAA) hydrolase K16165 nagK; fumarylpyruvate hydrolase [EC:3.7.1.20] C 00360 Phenylalanine metabolism [PATH:dar00360] D Daro_3366 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Daro_0374 phenylacetate-CoA ligase K01912 paaK; phenylacetate-CoA ligase [EC:6.2.1.30] D Daro_0373 Phenylacetic acid degradation-related protein:Phenylacetic acid degradation protein PaaD K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-] D Daro_0377 Phenylacetate-CoA oxygenase, PaaG subunit K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] D Daro_0378 Phenylacetic acid degradation B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB D Daro_0379 Phenylacetate-CoA oxygenase, PaaI subunit K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] D Daro_0380 Phenylacetate-CoA oxygenase, PaaJ subunit K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD D Daro_0381 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE D Daro_0371 Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Daro_2354 Enoyl-CoA hydratase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0372 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Daro_1233 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_3383 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_2002 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Daro_3842 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] D Daro_0290 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Daro_3836 Fungal/archaeal/bacterial heme catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] D Daro_1360 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Daro_1353 2,3-dihydroxyphenylpropionate 1,2-dioxygenase K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D Daro_0901 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B K05713 mhpB; 2,3-dihydroxyphenylpropionate 1,2-dioxygenase [EC:1.13.11.16] D Daro_1361 2-hydroxy-6-ketonona-2,4-dienedioate hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D Daro_0911 2-hydroxy-6-ketonona-2,4-dienedioate hydrolase K05714 mhpC; 2-hydroxy-6-oxonona-2,4-dienedioate hydrolase [EC:3.7.1.14] D Daro_1354 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_0905 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_3242 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_3238 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Daro_3239 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00380 Tryptophan metabolism [PATH:dar00380] D Daro_3444 LipQ K01432 AFMID; arylformamidase [EC:3.5.1.9] D Daro_3787 2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Daro_2775 2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Daro_3806 2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Daro_2858 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0539 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_3329 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Daro_1360 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Daro_1337 Amidase K21801 iaaH; indoleacetamide hydrolase [EC:3.5.1.-] D Daro_0523 Catalase, N-terminal K03781 katE; catalase [EC:1.11.1.6] D Daro_3836 Fungal/archaeal/bacterial heme catalase/peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21] C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:dar00400] D Daro_1964 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Daro_3324 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Daro_0216 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4] D Daro_3940 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10] D Daro_3907 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] D Daro_0215 shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71] D Daro_1279 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19] D Daro_0858 chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5] D Daro_3481 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Daro_3477 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Daro_3476 anthranilate phosphoribosyltransferase K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18] D Daro_0869 phosphoribosylanthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24] D Daro_3475 indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48] D Daro_0871 tryptophan synthase, alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20] D Daro_0870 tryptophan synthase, beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Daro_3711 Tryptophan synthase, beta chain-like protein K06001 trpB; tryptophan synthase beta chain [EC:4.2.1.20] D Daro_1232 prephenate dehydratase K14170 pheA; chorismate mutase / prephenate dehydratase [EC:5.4.99.5 4.2.1.51] D Daro_1234 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Daro_1233 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_3383 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_2002 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Daro_4196 Endoribonuclease L-PSP K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] B B 09106 Metabolism of other amino acids C 00410 beta-Alanine metabolism [PATH:dar00410] D Daro_3187 Aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] D Daro_3186 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Daro_0096 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00248 ACADS; butyryl-CoA dehydrogenase [EC:1.3.8.1] D Daro_1774 Malonyl-CoA decarboxylase K01578 MLYCD; malonyl-CoA decarboxylase [EC:4.1.1.9] C 00430 Taurine and hypotaurine metabolism [PATH:dar00430] D Daro_2145 L-alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1] D Daro_0975 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Daro_2098 phosphate butyryltransferase K00625 pta; phosphate acetyltransferase [EC:2.3.1.8] D Daro_2099 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_0974 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] D Daro_2921 acetate kinase K00925 ackA; acetate kinase [EC:2.7.2.1] C 00440 Phosphonate and phosphinate metabolism C 00450 Selenocompound metabolism [PATH:dar00450] D Daro_4129 Aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Daro_0046 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Daro_1293 Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9] D Daro_2945 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Daro_2944 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Daro_1054 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Daro_1814 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Daro_0574 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] C 00460 Cyanoamino acid metabolism [PATH:dar00460] D Daro_3329 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Daro_0603 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] C 00470 D-Amino acid metabolism [PATH:dar00470] D Daro_1986 Alanine racemase region K01775 alr; alanine racemase [EC:5.1.1.1] D Daro_0290 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Daro_3496 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Daro_3114 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Daro_3500 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Daro_0192 diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7] D Daro_1645 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Daro_0207 diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Daro_2435 Orn/DAP/Arg decarboxylase 2 K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20] D Daro_3842 D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1] C 00480 Glutathione metabolism [PATH:dar00480] D Daro_2114 Enzymatic protein of unknown function K06048 gshA; glutamate---cysteine ligase / carboxylate-amine ligase [EC:6.3.2.2 6.3.-.-] D Daro_0011 Glutamate--cysteine ligase GshA K01919 gshA; glutamate--cysteine ligase [EC:6.3.2.2] D Daro_0010 glutathione synthase K01920 gshB; glutathione synthase [EC:6.3.2.3] D Daro_3082 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Daro_2961 Peptidase M17, leucyl aminopeptidase, C-terminal K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Daro_3676 alanyl aminopeptidase, Metallo peptidase, MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Daro_1720 Peptidase M20C, Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Daro_3289 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Daro_1382 Glutathione S-transferase, N-terminal K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Daro_3119 isocitrate dehydrogenase (NADP) K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Daro_3120 Isocitrate dehydrogenase NADP-dependent, monomeric type K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42] D Daro_2069 6-phosphogluconate dehydrogenase (decarboxylating) K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343] D Daro_2070 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Daro_1090 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Daro_0488 Glutathione peroxidase K00432 gpx; glutathione peroxidase [EC:1.11.1.9] D Daro_0026 S-adenosylmethionine decarboxylase related protein K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_3735 Spermine synthase K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_1722 Spermidine synthase-like protein K00797 speE; spermidine synthase [EC:2.5.1.16] D Daro_0836 conserved hypothetical protein K00797 speE; spermidine synthase [EC:2.5.1.16] B B 09107 Glycan biosynthesis and metabolism C 00510 N-Glycan biosynthesis C 00513 Various types of N-glycan biosynthesis C 00512 Mucin type O-glycan biosynthesis C 00515 Mannose type O-glycan biosynthesis C 00514 Other types of O-glycan biosynthesis D Daro_0785 TPR repeat K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin C 00533 Glycosaminoglycan biosynthesis - keratan sulfate C 00531 Glycosaminoglycan degradation C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series C 00604 Glycosphingolipid biosynthesis - ganglio series C 00511 Other glycan degradation C 00540 Lipopolysaccharide biosynthesis [PATH:dar00540] D Daro_1754 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Daro_3492 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Daro_1752 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Daro_0914 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Daro_1755 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Daro_3208 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Daro_3418 KpsF/GutQ K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Daro_2365 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Daro_3419 HAD-superfamily hydrolase subfamily IIIA:Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Daro_3206 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Daro_3927 Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Daro_0189 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Daro_0190 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Daro_0471 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Daro_0501 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Daro_1285 D-alpha,beta-D-heptose 7-phosphate 1-kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D Daro_3536 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Daro_0486 Cytidyltransferase-related protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D Daro_1286 ADP-glyceromanno-heptose 6-epimerase precursor K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D Daro_3928 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Daro_3296 Lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D Daro_0152 Lipopolysaccharide heptosyltransferase III, putative K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Daro_0162 Glycosyl transferase, family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Daro_0153 Glycosyl transferase, group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] C 00542 O-Antigen repeat unit biosynthesis C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:dar00541] D Daro_1735 UDP-glucose pyrophosphorylase K00963 UGP2; UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9] D Daro_1236 UDP-galactose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Daro_1255 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Daro_1259 NAD-dependent epimerase/dehydratase:3-beta hydroxysteroid dehydrogenase/isomerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2] D Daro_1284 UDP-glucose/GDP-mannose dehydrogenase K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22] D Daro_3930 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase:Nucleotide sugar epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6] D Daro_1238 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Daro_1237 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Daro_1239 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Daro_1258 dTDP-4-dehydrorhamnose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Daro_1741 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Daro_1263 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Daro_1256 Nucleotidyl transferase K00978 rfbF; glucose-1-phosphate cytidylyltransferase [EC:2.7.7.33] D Daro_1257 NAD-dependent epimerase/dehydratase:Polysaccharide biosynthesis protein CapD K01709 rfbG; CDP-glucose 4,6-dehydratase [EC:4.2.1.45] D Daro_0279 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Daro_0368 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Daro_3237 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00523 ascD; CDP-4-dehydro-6-deoxyglucose reductase, E3 [EC:1.17.1.1] D Daro_2389 mannose-6-phosphate isomerase, type 2 / mannose-1-phosphate guanylyltransferase (GDP) K16011 algA; mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8] D Daro_0220 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase K04042 glmU; bifunctional UDP-N-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] D Daro_1265 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Daro_2402 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Daro_1264 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR:3-beta hydroxysteroid dehydrogenase/isomerase:Polysaccharide biosynthesis protein CapD:dTDP-4-dehydrorhamnose reductase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-] D Daro_1246 surface polysaccharide biosynthesis protein, transferase K15897 pseG; UDP-2,4-diacetamido-2,4,6-trideoxy-beta-L-altropyranose hydrolase [EC:3.6.1.57] D Daro_2440 UDP-glucose/GDP-mannose dehydrogenase:6-phosphogluconate dehydrogenase, NAD-binding protein K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-] C 00550 Peptidoglycan biosynthesis [PATH:dar00550] D Daro_3393 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Daro_0044 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Daro_3497 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Daro_3500 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Daro_3496 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Daro_3502 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Daro_3503 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10] D Daro_1746 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Daro_3911 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Daro_2302 Undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Daro_3501 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Daro_3498 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Daro_3906 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Daro_0209 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Daro_1016 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Daro_0390 Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Daro_0113 cell elongation-specific peptidoglycan D,D-transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Daro_3504 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Daro_0291 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Daro_0423 D-Ala-D-Ala carboxypeptidase PBP3, Serine peptidase, MEROPS family S13 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] C 00552 Teichoic acid biosynthesis [PATH:dar00552] D Daro_3911 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Daro_2302 Undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Daro_3547 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] C 00571 Lipoarabinomannan (LAM) biosynthesis C 00572 Arabinogalactan biosynthesis - Mycobacterium C 00543 Exopolysaccharide biosynthesis [PATH:dar00543] D Daro_2421 Membrane bound O-acyl transferase, MBOAT K19294 algI; alginate O-acetyltransferase complex protein AlgI D Daro_1397 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] D Daro_1947 serine O-acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30] B B 09108 Metabolism of cofactors and vitamins C 00730 Thiamine metabolism [PATH:dar00730] D Daro_3921 hydroxymethylpyrimidine synthase K03147 thiC; phosphomethylpyrimidine synthase [EC:4.1.99.17] D Daro_3900 Phosphomethylpyrimidine kinase K00941 thiD; hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] D Daro_1515 Aminotransferase, class V:Aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1950 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1949 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_3061 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Daro_3861 thiazole-phosphate synthase K03149 thiG; thiazole synthase [EC:2.8.1.10] D Daro_3901 thiamine-phosphate diphosphorylase K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3] D Daro_3740 thiamine-phosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16] D Daro_3004 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Daro_3229 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Daro_3205 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] C 00740 Riboflavin metabolism [PATH:dar00740] D Daro_3737 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Daro_0605 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Daro_3738 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78] D Daro_4095 Lumazine-binding protein K00793 ribE; riboflavin synthase [EC:2.5.1.9] D Daro_3047 FMN adenylyltransferase / riboflavin kinase K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] D Daro_0141 cob(II)yrinic acid a,c-diamide reductase K04719 bluB; 5,6-dimethylbenzimidazole synthase [EC:1.13.11.79] D Daro_0963 NUDIX hydrolase K01515 nudF; ADP-ribose diphosphatase [EC:3.6.1.13 3.6.1.-] D Daro_0067 Phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] C 00750 Vitamin B6 metabolism [PATH:dar00750] D Daro_3593 Glyceraldehyde 3-phosphate dehydrogenase K03472 epd; D-erythrose 4-phosphate dehydrogenase [EC:1.2.1.72] D Daro_1231 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Daro_0984 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Daro_3657 4-hydroxythreonine-4-phosphate dehydrogenase K00097 pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] D Daro_2032 pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2] D Daro_2382 L-threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1] C 00760 Nicotinate and nicotinamide metabolism [PATH:dar00760] D Daro_2021 L-aspartate oxidase K00278 nadB; L-aspartate oxidase [EC:1.4.3.16] D Daro_3766 quinolinate synthetase A K03517 nadA; quinolinate synthase [EC:2.5.1.72] D Daro_2380 nicotinate-nucleotide pyrophosphorylase (carboxylating) K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19] D Daro_2524 3'-nucleotidase K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6] D Daro_0169 nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] D Daro_1074 NUDIX hydrolase K03426 NUDT12_13; NAD+ diphosphatase [EC:3.6.1.22] D Daro_1290 NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5] D Daro_3874 CinA, C-terminal K03743 pncC; nicotinamide-nucleotide amidase [EC:3.5.1.42] D Daro_1847 Silent information regulator protein Sir2 K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313] D Daro_0931 ATP-NAD/AcoX kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23] D Daro_1497 Alanine dehydrogenase/PNT, C-terminal:Alanine dehydrogenase/PNT, N-terminal K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Daro_1498 pyridine nucleotide transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Daro_3122 Alanine dehydrogenase/PNT, C-terminal:Alanine dehydrogenase/PNT, N-terminal K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Daro_3123 pyridine nucleotide transhydrogenase subunit alpha K00324 pntA; proton-translocating NAD(P)+ transhydrogenase subunit alpha [EC:7.1.1.1] D Daro_1499 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Daro_3124 NAD(P) transhydrogenase, beta subunit K00325 pntB; proton-translocating NAD(P)+ transhydrogenase subunit beta [EC:7.1.1.1] D Daro_3748 succinate semialdehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] D Daro_0671 Aldehyde dehydrogenase K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20] C 00770 Pantothenate and CoA biosynthesis [PATH:dar00770] D Daro_1620 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Daro_3075 acetolactate synthase, large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6] D Daro_1619 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Daro_3074 acetolactate synthase, small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6] D Daro_3073 ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86] D Daro_0302 dihydroxyacid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9] D Daro_3185 ketopantoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] D Daro_1913 ketopantoate reductase K00077 panE; 2-dehydropantoate 2-reductase [EC:1.1.1.169] D Daro_3186 pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1] D Daro_3756 Bvg accessory factor K03525 coaX; type III pantothenate kinase [EC:2.7.1.33] D Daro_3141 Phosphopantothenoylcysteine decarboxylase / Phosphopantothenate-cysteine ligase K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5] D Daro_3723 Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] D Daro_3709 Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24] D Daro_2033 Holo-acyl carrier protein synthase:phosphopantetheine-protein transferase K00997 acpS; holo-[acyl-carrier protein] synthase [EC:2.7.8.7] D Daro_0173 phosphopantetheinyl transferase-like protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-] D Daro_3294 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_4078 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_3187 Aspartate decarboxylase K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11] C 00780 Biotin metabolism [PATH:dar00780] D Daro_0619 biotin synthesis protein K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Daro_2899 pimeloyl-CoA biosynthesis protein BioC K02169 bioC; malonyl-CoA O-methyltransferase [EC:2.1.1.197] D Daro_4185 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Daro_2374 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Daro_2019 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Daro_4170 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Daro_1172 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Daro_2017 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Daro_4188 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Daro_1753 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Daro_4174 conserved hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Daro_0978 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Daro_1935 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Daro_2898 carboxylesterase BioH (pimeloyl-CoA synthesis) K02170 bioH; pimeloyl-[acyl-carrier protein] methyl ester esterase [EC:3.1.1.85] D Daro_2897 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Daro_2895 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Daro_2900 Dethiobiotin synthase K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3] D Daro_0618 Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6] D Daro_3757 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] C 00785 Lipoic acid metabolism [PATH:dar00785] D Daro_0288 Lipoate-protein ligase B K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181] D Daro_0287 Lipoate synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0442 2-oxo-acid dehydrogenase E1 component homodimeric type K00163 aceE; pyruvate dehydrogenase E1 component [EC:1.2.4.1] D Daro_0441 Dihydrolipoamide acetyltransferase K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12] D Daro_2859 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2] D Daro_2858 2-oxoglutarate dehydrogenase E2 component K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] D Daro_2465 glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2] D Daro_2463 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Daro_2464 glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein D Daro_1809 Glycine cleavage H-protein K02437 gcvH; glycine cleavage system H protein C 00790 Folate biosynthesis [PATH:dar00790] D Daro_3062 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Daro_0489 GTP cyclohydrolase I K09007 folE2; GTP cyclohydrolase IB [EC:3.5.4.16] D Daro_3229 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Daro_0631 dihydroneopterin triphosphate pyrophosphatase K08310 nudB; dihydroneopterin triphosphate diphosphatase [EC:3.6.1.67] D Daro_0534 Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Daro_1540 hypothetical protein K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81] D Daro_3183 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] D Daro_0945 Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15] D Daro_0579 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Daro_1541 Dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Daro_0873 Folylpolyglutamate synthetase K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17] D Daro_3737 3,4-dihydroxy-2-butanone 4-phosphate synthase K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] D Daro_3087 Para-aminobenzoate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D Daro_0854 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Daro_0453 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Daro_4050 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Daro_4042 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Daro_2346 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Daro_2612 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Daro_1999 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Daro_2577 Radical SAM:Molybdenum cofactor synthesis C-terminal K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Daro_3090 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Daro_2729 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Daro_0595 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Daro_1783 molybdopterin molybdochelatase K03750 moeA; molybdopterin molybdotransferase [EC:2.10.1.1] D Daro_1894 conserved hypothetical protein K07141 mocA; molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] D Daro_3875 molybdenum cofactor guanylyltransferase K03752 mobA; molybdenum cofactor guanylyltransferase [EC:2.7.7.77] C 00670 One carbon pool by folate [PATH:dar00670] D Daro_0579 dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Daro_1541 Dihydrofolate reductase region K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3] D Daro_0448 5,10-methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] D Daro_0603 serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1] D Daro_3161 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2] D Daro_3667 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Daro_0022 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Daro_2463 aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10] D Daro_0046 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] D Daro_0593 thymidylate synthase K00560 thyA; thymidylate synthase [EC:2.1.1.45] D Daro_0056 formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10] D Daro_0183 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54] D Daro_4131 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2] C 00830 Retinol metabolism C 00860 Porphyrin metabolism [PATH:dar00860] D Daro_1321 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Daro_3689 glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70] D Daro_3902 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Daro_1245 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Daro_0626 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Daro_3674 Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61] D Daro_3673 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75] D Daro_0032 Uroporphyrinogen decarboxylase HemE K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37] D Daro_3669 Coproporphyrinogen III oxidase K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3] D Daro_1048 coproporphyrinogen III oxidase, anaerobic K02495 hemN; oxygen-independent coproporphyrinogen III oxidase [EC:1.3.98.3] D Daro_0281 Conserved hypothetical protein 701 K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-] D Daro_0929 ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9] D Daro_3672 Protein of unknown function DUF513, hemX K02496 hemX; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Daro_3275 uroporphyrinogen-III C-methyltransferase K02303 cobA; uroporphyrin-III C-methyltransferase [EC:2.1.1.107] D Daro_3268 transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Daro_3269 transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Daro_3267 transcriptional regulator, AsnC family K22225 ahbAB; siroheme decarboxylase [EC:4.1.1.111] D Daro_3260 Cytochrome d1, heme region K24867 nirN; dihydro-heme d1 dehydrogenase D Daro_1463 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Daro_1462 Cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Daro_0828 Cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Daro_1692 Cobalamin (vitamin B12) biosynthesis CbiX protein K03795 cbiX; sirohydrochlorin cobaltochelatase [EC:4.99.1.3] D Daro_1688 precorrin-2 C20-methyltransferase / cobalt-factor II C20-methyltransferase K03394 cobI-cbiL; precorrin-2/cobalt-factor-2 C20-methyltransferase [EC:2.1.1.130 2.1.1.151] D Daro_1685 precorrin-3 methyltransferase K05934 cobJ; precorrin-3B C17-methyltransferase / cobalt-factor III methyltransferase [EC:2.1.1.131 2.1.1.272] D Daro_1693 precorrin-4 C11-methyltransferase K05936 cobM; precorrin-4/cobalt-precorrin-4 C11-methyltransferase [EC:2.1.1.133 2.1.1.271] D Daro_1687 Cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Daro_1686 Cobalamin (vitamin B12) biosynthesis CbiG protein K02189 cbiG; cobalt-precorrin 5A hydrolase [EC:3.7.1.12] D Daro_1690 Cobalamin (vitamin B12) biosynthesis CbiD protein K02188 cbiD; cobalt-precorrin-5B (C1)-methyltransferase [EC:2.1.1.195] D Daro_1689 precorrin-6Y C5,15-methyltransferase (decarboxylating) K00595 cobL-cbiET; precorrin-6B C5,15-methyltransferase / cobalt-precorrin-6B C5,C15-methyltransferase [EC:2.1.1.132 2.1.1.289 2.1.1.196] D Daro_1691 precorrin-8X methylmutase K06042 cobH-cbiC; precorrin-8X/cobalt-precorrin-8 methylmutase [EC:5.4.99.61 5.4.99.60] D Daro_4034 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase K02224 cobB-cbiA; cobyrinic acid a,c-diamide synthase [EC:6.3.5.9 6.3.5.11] D Daro_3318 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Daro_4033 cob(I)yrinic acid a,c-diamide adenosyltransferase K19221 cobA; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Daro_0144 adenosylcobyric acid synthase (glutamine-hydrolysing) K02232 cobQ; adenosylcobyric acid synthase [EC:6.3.5.10] D Daro_3023 Cobalamin biosynthesis protein CbiB K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Daro_0140 adenosylcobinamide-phosphate synthase K02227 cbiB; adenosylcobinamide-phosphate synthase [EC:6.3.1.10] D Daro_0139 aminotransferase K02225 cobC1; cobalamin biosynthesis protein CobC D Daro_0147 adenosylcobinamide kinase K02231 cobP; adenosylcobinamide kinase / adenosylcobinamide-phosphate guanylyltransferase [EC:2.7.1.156 2.7.7.62] D Daro_0149 cobalamin-5'-phosphate synthase K02233 E2.7.8.26; adenosylcobinamide-GDP ribazoletransferase [EC:2.7.8.26] D Daro_0148 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase K00768 E2.4.2.21; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [EC:2.4.2.21] D Daro_0151 Phosphoglycerate/bisphosphoglycerate mutase K02226 cobC; alpha-ribazole phosphatase [EC:3.1.3.73] D Daro_1061 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] D Daro_1062 Bacterioferritin K03594 bfr; bacterioferritin [EC:1.16.3.1] C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:dar00130] D Daro_3252 chorismate lyase K03181 ubiC; chorismate lyase [EC:4.1.3.40] D Daro_4196 Endoribonuclease L-PSP K18240 xanB2; chorismate lyase / 3-hydroxybenzoate synthase [EC:4.1.3.40 4.1.3.45] D Daro_0413 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Daro_0415 3-octaprenyl-4hydroxybenzoate decarboxylase K03182 ubiD; 4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:4.1.1.98] D Daro_0067 Phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Daro_3510 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase K18800 ubiI; 2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240] D Daro_1227 3-demethylubiquinone-9 3-methyltransferase K00568 ubiG; 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltransferase [EC:2.1.1.222 2.1.1.64] D Daro_3663 2-octaprenyl-6-methoxyphenol hydroxylase K03185 ubiH; 2-octaprenyl-6-methoxyphenol hydroxylase [EC:1.14.13.-] D Daro_4117 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201] D Daro_0647 putative ubiquinone biosynthesis protein K06134 COQ7; 3-demethoxyubiquinol 3-hydroxylase [EC:1.14.99.60] D Daro_2823 Isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D Daro_2345 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9] D Daro_1615 Mandelate racemase/muconate lactonizing enzyme K02549 menC; o-succinylbenzoate synthase [EC:4.2.1.113] D Daro_2822 AMP-dependent synthetase and ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26] D Daro_1616 1,4-Dihydroxy-2-naphthoate synthase K01661 menB; naphthoate synthase [EC:4.1.3.36] D Daro_3232 Phenylacetic acid degradation-related protein K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28] D Daro_3664 1,4-dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Daro_3069 flavodoxin-like protein K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] D Daro_0554 Flavodoxin/nitric oxide synthase K03809 wrbA; NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2] B B 09109 Metabolism of terpenoids and polyketides C 00900 Terpenoid backbone biosynthesis [PATH:dar00900] D Daro_3061 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7] D Daro_1748 1-deoxy-D-xylulose 5-phosphate reductoisomerase K00099 dxr; 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267] D Daro_1973 4-diphosphocytidyl-2C-methyl-D-erythritol synthase K00991 ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [EC:2.7.7.60] D Daro_3729 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase K00919 ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [EC:2.7.1.148] D Daro_1974 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase K01770 ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:4.6.1.12] D Daro_2985 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase K03526 gcpE; (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] D Daro_3043 4-hydroxy-3-methylbut-2-enyl diphosphate reductase K03527 ispH; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:1.17.7.4] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0067 Phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Daro_3060 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Daro_0658 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Daro_1746 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Daro_3002 Peptidase M48, Ste24p K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] C 00902 Monoterpenoid biosynthesis C 00909 Sesquiterpenoid and triterpenoid biosynthesis C 00904 Diterpenoid biosynthesis C 00906 Carotenoid biosynthesis [PATH:dar00906] D Daro_2706 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] C 00905 Brassinosteroid biosynthesis C 00981 Insect hormone biosynthesis C 00908 Zeatin biosynthesis C 00903 Limonene degradation C 00907 Pinene, camphor and geraniol degradation [PATH:dar00907] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Daro_0086 hydroxymethylglutaryl-CoA lyase K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4] D Daro_2352 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_1550 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] C 01052 Type I polyketide structures C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides C 01051 Biosynthesis of ansamycins D Daro_3591 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] D Daro_3626 transketolase K00615 E2.2.1.1; transketolase [EC:2.2.1.1] C 01059 Biosynthesis of enediyne antibiotics D Daro_4058 conserved hypothetical protein K21163 sgcE5; enediyne biosynthesis protein E5 C 01056 Biosynthesis of type II polyketide backbone C 01057 Biosynthesis of type II polyketide products C 00253 Tetracycline biosynthesis C 00523 Polyketide sugar unit biosynthesis [PATH:dar00523] D Daro_1238 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Daro_1237 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Daro_1239 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Daro_1258 dTDP-4-dehydrorhamnose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Daro_1741 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Daro_1263 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 01054 Nonribosomal peptide structures C 01053 Biosynthesis of siderophore group nonribosomal peptides [PATH:dar01053] D Daro_2823 Isochorismate synthase K02552 menF; menaquinone-specific isochorismate synthase [EC:5.4.4.2] D Daro_4076 Chorismate mutase K04782 pchB; isochorismate pyruvate lyase [EC:4.2.99.21] C 01055 Biosynthesis of vancomycin group antibiotics D Daro_1237 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] B B 09110 Biosynthesis of other secondary metabolites C 00940 Phenylpropanoid biosynthesis C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis C 00941 Flavonoid biosynthesis C 00944 Flavone and flavonol biosynthesis C 00942 Anthocyanin biosynthesis C 00943 Isoflavonoid biosynthesis C 00946 Degradation of flavonoids C 00901 Indole alkaloid biosynthesis C 00403 Indole diterpene alkaloid biosynthesis C 00950 Isoquinoline alkaloid biosynthesis C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis C 00996 Biosynthesis of various alkaloids C 00232 Caffeine metabolism C 00965 Betalain biosynthesis C 00966 Glucosinolate biosynthesis C 00402 Benzoxazinoid biosynthesis C 00311 Penicillin and cephalosporin biosynthesis C 00332 Carbapenem biosynthesis [PATH:dar00332] D Daro_3473 glutamate 5-kinase K00931 proB; glutamate 5-kinase [EC:2.7.2.11] D Daro_0540 glutamate-5-semialdehyde dehydrogenase K00147 proA; glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] C 00261 Monobactam biosynthesis [PATH:dar00261] D Daro_2945 sulfate adenylyltransferase subunit 1 K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4] D Daro_2944 sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4] D Daro_2515 aspartate kinase K00928 lysC; aspartate kinase [EC:2.7.2.4] D Daro_0865 aspartate semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11] D Daro_0846 dihydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7] D Daro_0936 dihydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8] C 00331 Clavulanic acid biosynthesis C 00521 Streptomycin biosynthesis [PATH:dar00521] D Daro_0592 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] D Daro_1444 Phosphoglucomutase, alpha-D-glucose phosphate-specific K01835 pgm; phosphoglucomutase [EC:5.4.2.2] D Daro_3299 phosphomannomutase K15778 pmm-pgm; phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] D Daro_1681 Inositol monophosphatase K01092 E3.1.3.25; myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] D Daro_1238 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Daro_1237 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] D Daro_1239 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Daro_1258 dTDP-4-dehydrorhamnose epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] D Daro_1741 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] D Daro_1263 dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133] C 00524 Neomycin, kanamycin and gentamicin biosynthesis D Daro_0592 glucokinase K00845 glk; glucokinase [EC:2.7.1.2] C 00525 Acarbose and validamycin biosynthesis [PATH:dar00525] D Daro_1238 Glucose-1-phosphate thymidylyltransferase K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] D Daro_1237 dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] C 00401 Novobiocin biosynthesis [PATH:dar00401] D Daro_1234 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12] D Daro_1233 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_3383 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_2002 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] C 00404 Staurosporine biosynthesis C 00405 Phenazine biosynthesis D Daro_3481 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Daro_3477 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] C 00333 Prodigiosin biosynthesis D Daro_2016 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Daro_4014 Acyl transferase region K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Daro_2017 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Daro_4188 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Daro_0978 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Daro_1935 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] C 00254 Aflatoxin biosynthesis C 00998 Biosynthesis of various antibiotics D Daro_2018 Acyl carrier protein (ACP) K02078 acpP; acyl carrier protein D Daro_1945 putative acyl-carrier-protein K02078 acpP; acyl carrier protein D Daro_4171 acyl carrier protein K02078 acpP; acyl carrier protein D Daro_1173 Phosphopantetheine-binding protein K02078 acpP; acyl carrier protein D Daro_2433 conserved hypothetical protein K02078 acpP; acyl carrier protein D Daro_2373 acyl carrier protein K02078 acpP; acyl carrier protein D Daro_4169 Phosphopantetheine-binding protein K02078 acpP; acyl carrier protein C 00999 Biosynthesis of various plant secondary metabolites [PATH:dar00999] D Daro_0188 methionine adenosyltransferase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6] D Daro_3907 shikimate dehydrogenase K00014 aroE; shikimate dehydrogenase [EC:1.1.1.25] C 00997 Biosynthesis of various other secondary metabolites B B 09111 Xenobiotics biodegradation and metabolism C 00362 Benzoate degradation [PATH:dar00362] D Daro_2778 benzoate 1,2-dioxygenase, alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D Daro_2779 toluate 1,2-dioxygenase beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D Daro_2780 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Daro_1359 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Daro_2781 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D Daro_2352 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_1550 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_0375 Thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174] D Daro_3797 phenol 2-monooxygenase P0 subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D Daro_3796 phenol 2-monooxygenase P1 subunit K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D Daro_3795 phenol 2-monooxygenase P2 subunit K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D Daro_3794 phenol 2-monooxygenase P3 subunit K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D Daro_3793 phenol 2-monooxygenase P4 subunit K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D Daro_3792 phenol 2-monooxygenase P5 subunit K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D Daro_3805 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_3789 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_2776 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_3786 2-hydroxymuconate semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D Daro_1331 2-hydroxymuconate semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D Daro_1354 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_0905 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_3242 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_3785 Hydratase/decarboxylase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D Daro_2774 Hydratase/decarboxylase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D Daro_3238 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Daro_0907 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_3808 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_3782 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_1356 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_3239 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Daro_3807 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_3783 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_0906 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_1355 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_3787 2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Daro_2775 2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Daro_3806 2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Daro_0360 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Daro_3780 4-oxalocrotonate isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Daro_3781 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Daro_2773 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Daro_2931 4-carboxymuconolactone decarboxylase K01607 pcaC; 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] D Daro_3248 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1549 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] D Daro_0539 Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0372 3-hydroxyacyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] C 00627 Aminobenzoate degradation [PATH:dar00627] D Daro_1360 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Daro_3329 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Daro_1185 Acylphosphatase K01512 acyP; acylphosphatase [EC:3.6.1.7] D Daro_0067 Phenylacrylic acid decarboxylase K03186 ubiX; flavin prenyltransferase [EC:2.5.1.129] D Daro_3248 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] C 00364 Fluorobenzoate degradation [PATH:dar00364] D Daro_2778 benzoate 1,2-dioxygenase, alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D Daro_2779 toluate 1,2-dioxygenase beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D Daro_2780 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Daro_1359 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Daro_2781 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D Daro_0181 Twin-arginine translocation pathway signal K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Daro_3231 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00625 Chloroalkane and chloroalkene degradation [PATH:dar00625] D Daro_1348 Zinc-containing alcohol dehydrogenase superfamily K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] D Daro_1413 Mo-nitrogenase MoFe protein subunit NifK K02591 nifK; nitrogenase molybdenum-iron protein beta chain [EC:1.18.6.1] D Daro_1415 Mo-nitrogenase iron protein subunit NifH K02588 nifH; nitrogenase iron protein NifH D Daro_1414 Mo-nitrogenase MoFe protein subunit NifD precursor K02586 nifD; nitrogenase molybdenum-iron protein alpha chain [EC:1.18.6.1] D Daro_1023 Pyrrolo-quinoline quinone K00114 exaA; alcohol dehydrogenase (cytochrome c) [EC:1.1.2.8] D Daro_3835 Alpha/beta hydrolase fold protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:dar00361] D Daro_3797 phenol 2-monooxygenase P0 subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D Daro_3796 phenol 2-monooxygenase P1 subunit K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D Daro_3795 phenol 2-monooxygenase P2 subunit K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D Daro_3794 phenol 2-monooxygenase P3 subunit K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D Daro_3793 phenol 2-monooxygenase P4 subunit K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D Daro_3792 phenol 2-monooxygenase P5 subunit K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D Daro_0181 Twin-arginine translocation pathway signal K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Daro_3231 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Daro_0899 2,4-dichlorophenol 6-monooxygenase K10676 tfdB; 2,4-dichlorophenol 6-monooxygenase [EC:1.14.13.20] D Daro_3805 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_3789 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_2776 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_3835 Alpha/beta hydrolase fold protein K01561 dehH; haloacetate dehalogenase [EC:3.8.1.3] C 00623 Toluene degradation [PATH:dar00623] D Daro_3797 phenol 2-monooxygenase P0 subunit K16249 dmpK; phenol/toluene 2-monooxygenase (NADH) P0/A0 D Daro_3796 phenol 2-monooxygenase P1 subunit K16243 dmpL; phenol/toluene 2-monooxygenase (NADH) P1/A1 [EC:1.14.13.244 1.14.13.243] D Daro_3795 phenol 2-monooxygenase P2 subunit K16244 dmpM; phenol/toluene 2-monooxygenase (NADH) P2/A2 [EC:1.14.13.244 1.14.13.243] D Daro_3794 phenol 2-monooxygenase P3 subunit K16242 dmpN; phenol/toluene 2-monooxygenase (NADH) P3/A3 [EC:1.14.13.244 1.14.13.243] D Daro_3793 phenol 2-monooxygenase P4 subunit K16245 dmpO; phenol/toluene 2-monooxygenase (NADH) P4/A4 [EC:1.14.13.244 1.14.13.243] D Daro_3792 phenol 2-monooxygenase P5 subunit K16246 dmpP; phenol/toluene 2-monooxygenase (NADH) P5/A5 [EC:1.14.13.244 1.14.13.243] D Daro_3820 toluene 4-monooxygenase protein A K15760 tmoA; toluene monooxygenase system protein A [EC:1.14.13.236 1.14.13.-] D Daro_3819 toluene 4-monooxygenase protein B K15761 tmoB; toluene monooxygenase system protein B [EC:1.14.13.236 1.14.13.-] D Daro_3818 toluene 4-monooxygenase protein C K15762 tmoC; toluene monooxygenase system ferredoxin subunit D Daro_3817 toluene 4-monooxygenase protein D K15763 tmoD; toluene monooxygenase system protein D [EC:1.14.13.236 1.14.13.-] D Daro_3816 toluene 4-monooxygenase protein E K15764 tmoE; toluene monooxygenase system protein E [EC:1.14.13.236 1.14.13.-] D Daro_3815 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K15765 tmoF; toluene monooxygenase electron transfer component [EC:1.18.1.3] D Daro_0181 Twin-arginine translocation pathway signal K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] D Daro_3231 Dienelactone hydrolase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45] C 00622 Xylene degradation [PATH:dar00622] D Daro_2778 benzoate 1,2-dioxygenase, alpha subunit K05549 benA-xylX; benzoate/toluate 1,2-dioxygenase subunit alpha [EC:1.14.12.10 1.14.12.-] D Daro_2779 toluate 1,2-dioxygenase beta subunit K05550 benB-xylY; benzoate/toluate 1,2-dioxygenase subunit beta [EC:1.14.12.10 1.14.12.-] D Daro_2780 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Daro_1359 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K05784 benC-xylZ; benzoate/toluate 1,2-dioxygenase reductase component [EC:1.18.1.-] D Daro_2781 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase K05783 benD-xylL; dihydroxycyclohexadiene carboxylate dehydrogenase [EC:1.3.1.25 1.3.1.-] D Daro_3805 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_3789 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_2776 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_3786 2-hydroxymuconate semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D Daro_1331 2-hydroxymuconate semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D Daro_3787 2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Daro_2775 2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Daro_3806 2-hydroxymuconate semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85] D Daro_0360 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Daro_3780 4-oxalocrotonate isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Daro_3781 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Daro_2773 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Daro_3785 Hydratase/decarboxylase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D Daro_2774 Hydratase/decarboxylase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D Daro_0907 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_3808 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_3782 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_1356 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_3807 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_3783 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_0906 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_1355 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_1354 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_0905 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_3242 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_3238 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Daro_3239 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] C 00633 Nitrotoluene degradation [PATH:dar00633] D Daro_1868 dihydropteridine reductase K10679 nfnB; nitroreductase / dihydropteridine reductase [EC:1.-.-.- 1.5.1.34] D Daro_1099 NADH:flavin oxidoreductase/NADH oxidase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-] D Daro_3971 Nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Daro_3988 Nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Daro_3974 Ni-Fe hydrogenase, small subunit:Twin-arginine translocation pathway signal K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Daro_3989 Ni-Fe hydrogenase, small subunit:Twin-arginine translocation pathway signal K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Daro_2889 Nickel-dependent hydrogenase, large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D Daro_3960 Nickel-dependent hydrogenase, large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D Daro_2888 NADH ubiquinone oxidoreductase, 20 kDa subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D Daro_3961 uptake hydrogenase accessory protein hupU K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] C 00642 Ethylbenzene degradation [PATH:dar00642] D Daro_2352 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_1550 Thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16] D Daro_3246 phenylpropionate dioxygenase alpha subunit K14748 etbAa; ethylbenzene dioxygenase subunit alpha [EC:1.14.12.-] D Daro_3245 Aromatic-ring-hydroxylating dioxygenase, beta subunit K14749 etbAb; ethylbenzene dioxygenase subunit beta [EC:1.14.12.-] D Daro_3247 Rieske (2Fe-2S) region K14750 etbAc; ethylbenzene dioxygenase ferredoxin component D Daro_3250 2-hydroxymuconate semialdehyde hydrolase K18092 etbD; 2-hydroxy-6-oxo-octa-2,4-dienoate hydrolase [EC:3.7.1.-] C 00643 Styrene degradation [PATH:dar00643] D Daro_1360 Amidase K01426 E3.5.1.4; amidase [EC:3.5.1.4] D Daro_3329 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1] D Daro_3805 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_3789 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_2776 catechol 2,3-dioxygenase K00446 dmpB; catechol 2,3-dioxygenase [EC:1.13.11.2] D Daro_3786 2-hydroxymuconate semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D Daro_1331 2-hydroxymuconate semialdehyde hydrolase K10216 dmpD; 2-hydroxymuconate-semialdehyde hydrolase [EC:3.7.1.9] D Daro_0457 propionate CoA-transferase K01026 pct; propionate CoA-transferase [EC:2.8.3.1] C 00791 Atrazine degradation [PATH:dar00791] D Daro_0075 Amidase K01457 atzF; allophanate hydrolase [EC:3.5.1.54] D Daro_0074 Allophanate hydrolase subunit 2 K01941 E6.3.4.6; urea carboxylase [EC:6.3.4.6] D Daro_1427 urease, Metallo peptidase, MEROPS family M38 K01428 ureC; urease subunit alpha [EC:3.5.1.5] D Daro_1428 Urease, beta subunit K01429 ureB; urease subunit beta [EC:3.5.1.5] D Daro_1429 Urease, gamma subunit region K01430 ureA; urease subunit gamma [EC:3.5.1.5] C 00930 Caprolactam degradation [PATH:dar00930] D Daro_0176 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_0382 short chain enoyl-CoA hydratase K01692 paaF; enoyl-CoA hydratase [EC:4.2.1.17] D Daro_2350 3-hydroxyacyl-CoA dehydrogenase K01825 fadB; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:1.1.1.35 4.2.1.17 5.1.2.3 5.3.3.8] D Daro_1547 3-hydroxyacyl-CoA dehydrogenase K01782 fadJ; 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] C 00363 Bisphenol degradation C 00621 Dioxin degradation [PATH:dar00621] D Daro_0360 4-oxalocrotonate tautomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Daro_3780 4-oxalocrotonate isomerase K01821 praC; 4-oxalocrotonate tautomerase [EC:5.3.2.6] D Daro_3781 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Daro_2773 4-oxalocrotonate decarboxylase K01617 dmpH; 2-oxo-3-hexenedioate decarboxylase [EC:4.1.1.77] D Daro_1354 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_0905 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_3242 Hydratase/decarboxylase K02554 mhpD; 2-keto-4-pentenoate hydratase [EC:4.2.1.80] D Daro_3785 Hydratase/decarboxylase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D Daro_2774 Hydratase/decarboxylase K18364 bphH; 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase [EC:4.2.1.80 4.2.1.132] D Daro_3238 4-hydroxy-2-oxovalerate aldolase K01666 mhpE; 4-hydroxy 2-oxovalerate aldolase [EC:4.1.3.39] D Daro_0907 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_3808 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_3782 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_1356 4-hydroxy-2-oxovalerate aldolase K18365 bphI; 4-hydroxy-2-oxovalerate/4-hydroxy-2-oxohexanoate aldolase [EC:4.1.3.39 4.1.3.43] D Daro_3239 acetaldehyde dehydrogenase K04073 mhpF; acetaldehyde dehydrogenase [EC:1.2.1.10] D Daro_3807 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_3783 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_0906 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] D Daro_1355 acetaldehyde dehydrogenase K18366 bphJ; acetaldehyde/propanal dehydrogenase [EC:1.2.1.10 1.2.1.87] C 00626 Naphthalene degradation [PATH:dar00626] D Daro_1348 Zinc-containing alcohol dehydrogenase superfamily K00001 E1.1.1.1; alcohol dehydrogenase [EC:1.1.1.1] C 00624 Polycyclic aromatic hydrocarbon degradation D Daro_3248 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B K04101 ligB; protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8] C 00365 Furfural degradation C 00984 Steroid degradation D Daro_0902 conserved hypothetical protein K16047 hsaA; 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione monooxygenase [EC:1.14.14.12] C 00980 Metabolism of xenobiotics by cytochrome P450 C 00982 Drug metabolism - cytochrome P450 C 00983 Drug metabolism - other enzymes B B 09112 Not included in regular maps C 09113 Global maps only # A09120 Genetic Information Processing B B 09121 Transcription C 03020 RNA polymerase [PATH:dar03020] D Daro_0312 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Daro_0313 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Daro_0345 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Daro_3844 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] C 03022 Basal transcription factors C 03040 Spliceosome B B 09122 Translation C 03010 Ribosome [PATH:dar03010] D Daro_1280 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Daro_1742 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Daro_0325 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Daro_0344 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Daro_0336 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Daro_1216 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Daro_0315 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Daro_0333 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Daro_0650 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Daro_0318 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Daro_0343 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Daro_0314 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Daro_0342 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Daro_0332 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Daro_2449 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Daro_3066 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Daro_0328 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Daro_1218 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Daro_0323 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Daro_3035 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Daro_0529 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Daro_0309 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Daro_0322 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Daro_0319 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Daro_0320 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Daro_0331 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Daro_0334 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Daro_0311 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Daro_1219 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Daro_0310 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Daro_0308 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Daro_0649 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Daro_0329 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Daro_0338 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Daro_0326 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Daro_0346 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Daro_0335 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Daro_3063 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Daro_2674 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Daro_3470 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Daro_0324 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Daro_0321 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Daro_0330 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Daro_3731 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Daro_3471 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Daro_3143 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Daro_0327 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Daro_0337 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Daro_2999 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Daro_2013 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Daro_3144 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Daro_4204 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Daro_2675 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Daro_0341 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Daro_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0027 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0039 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0042 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0043 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA C 00970 Aminoacyl-tRNA biosynthesis [PATH:dar00970] D Daro_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0029 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0064 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0078 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0056 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0036 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Daro_R0058 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Daro_R0045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Daro_R0063 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Daro_R0048 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Daro_R0060 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Daro_R0077 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Daro_R0046 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Daro_R0049 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Daro_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0061 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0054 tRNA-His K14226 tRNA-His; tRNA His D Daro_R0003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Daro_R0028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Daro_R0040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Daro_R0019 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Daro_R0074 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0069 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0073 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0072 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0062 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Daro_R0009 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Daro_R0017 tRNA-Met K14230 tRNA-Met; tRNA Met D Daro_R0076 tRNA-Met K14230 tRNA-Met; tRNA Met D Daro_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Daro_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met D Daro_R0014 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Daro_R0067 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Daro_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Daro_R0065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Daro_R0066 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Daro_R0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Daro_R0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Daro_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Daro_R0012 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Daro_R0071 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Daro_R0024 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Daro_R0025 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Daro_R0013 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Daro_R0010 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Daro_R0053 tRNA-Val K14237 tRNA-Val; tRNA Val D Daro_R0068 tRNA-Val K14237 tRNA-Val; tRNA Val D Daro_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Daro_R0070 tRNA-Val K14237 tRNA-Val; tRNA Val D Daro_R0057 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Daro_1321 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Daro_0118 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Daro_0120 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Daro_0117 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Daro_3447 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Daro_3303 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Daro_0634 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Daro_3534 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Daro_3535 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Daro_2677 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Daro_1300 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Daro_1814 L-seryl-tRNA(Sec) selenium transferase K01042 selA; L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] D Daro_0919 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Daro_0574 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Daro_0022 methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9] D Daro_3085 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Daro_0544 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Daro_3046 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Daro_2848 Lysyl-tRNA synthetase, class-2 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Daro_3866 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Daro_0644 Prolyl-tRNA synthetase, bacterial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Daro_2984 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Daro_2673 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Daro_2672 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Daro_3175 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Daro_2459 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] C 03013 Nucleocytoplasmic transport C 03015 mRNA surveillance pathway C 03008 Ribosome biogenesis in eukaryotes B B 09123 Folding, sorting and degradation C 03060 Protein export [PATH:dar03060] D Daro_0339 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Daro_0306 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Daro_0948 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Daro_3280 SecD/SecF/SecDF export membrane protein:SecD export membrane protein K03072 secD; preprotein translocase subunit SecD D Daro_3281 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Daro_3279 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Daro_4201 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Daro_3488 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Daro_0613 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Daro_0642 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Daro_R0032 SRP RNA, RNA component of signal recognition particle K01983 ffs; SRP RNA D Daro_3718 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Daro_2637 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Daro_3375 Twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA D Daro_3374 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Daro_3373 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Daro_2027 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Daro_2630 Peptidase A8, signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D Daro_3045 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] D Daro_2624 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] C 04141 Protein processing in endoplasmic reticulum C 04130 SNARE interactions in vesicular transport C 04120 Ubiquitin mediated proteolysis C 04122 Sulfur relay system [PATH:dar04122] D Daro_1515 Aminotransferase, class V:Aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1950 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1949 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_3055 Rhodanese-like protein K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] D Daro_3088 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Daro_3291 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Daro_2729 molybdopterin synthase subunit MoaE K03635 MOCS2B; molybdopterin synthase catalytic subunit [EC:2.8.1.12] D Daro_2612 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Daro_1999 GTP cyclohydrolase subunit MoaA K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Daro_2577 Radical SAM:Molybdenum cofactor synthesis C-terminal K03639 moaA; GTP 3',8-cyclase [EC:4.1.99.22] D Daro_1784 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein D Daro_0105 molybdopterin synthase subunit MoaD K03636 moaD; sulfur-carrier protein D Daro_0606 [sulfur carrier protein ThiS] adenylyltransferase K21029 moeB; molybdopterin-synthase adenylyltransferase [EC:2.7.7.80] D Daro_3090 GTP cyclohydrolase subunit MoaC K03637 moaC; cyclic pyranopterin monophosphate synthase [EC:4.6.1.17] D Daro_0595 molybdopterin adenylyltransferase K03831 mogA; molybdopterin adenylyltransferase [EC:2.7.7.75] D Daro_3862 sulfur carrier protein ThiS K03154 thiS; sulfur carrier protein C 03050 Proteasome C 03018 RNA degradation [PATH:dar03018] D Daro_0645 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Daro_2005 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Daro_2364 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Daro_2448 3' exoribonuclease:RNA binding S1:KH, type 1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Daro_0878 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Daro_1820 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Daro_3310 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Daro_2972 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Daro_1118 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Daro_0913 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Daro_2998 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Daro_0923 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D Daro_0426 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Daro_2980 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Daro_2824 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Daro_0434 Protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Daro_3182 Poly(A) polymerase, PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] B B 09124 Replication and repair C 03030 DNA replication [PATH:dar03030] D Daro_1381 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1592 DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1907 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1636 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1633 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_0559 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Daro_0806 AAA ATPase, central region K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Daro_2196 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Daro_0542 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Daro_3083 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Daro_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Daro_1220 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Daro_0527 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Daro_0483 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Daro_1593 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Daro_1384 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Daro_3677 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Daro_1756 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Daro_0163 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7] D Daro_1734 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03410 Base excision repair [PATH:dar03410] D Daro_1155 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Daro_0064 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Daro_3726 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Daro_0843 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Daro_1887 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Daro_1983 Phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Daro_2037 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Daro_0123 AP endonuclease, family 1:Exodeoxyribonuclease III xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Daro_3648 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Daro_0163 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7] D Daro_2838 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Daro_1734 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03420 Nucleotide excision repair [PATH:dar03420] D Daro_1965 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Daro_0473 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Daro_2003 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Daro_2038 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Daro_0546 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Daro_0163 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7] D Daro_1734 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03430 Mismatch repair [PATH:dar03430] D Daro_2347 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Daro_3164 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Daro_0546 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Daro_3211 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Daro_3059 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Daro_2838 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Daro_0483 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Daro_0559 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Daro_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Daro_0806 AAA ATPase, central region K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Daro_0542 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Daro_2196 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Daro_1381 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1592 DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1907 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1636 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1633 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_3083 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Daro_1734 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] C 03440 Homologous recombination [PATH:dar03440] D Daro_2838 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Daro_0483 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Daro_2031 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Daro_0808 RecR protein K06187 recR; recombination protein RecR D Daro_4152 RecA bacterial DNA recombination protein K03553 recA; recombination protein RecA D Daro_0163 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7] D Daro_4062 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Daro_4060 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Daro_4063 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Daro_0356 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Daro_0559 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Daro_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Daro_0806 AAA ATPase, central region K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Daro_0542 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Daro_2196 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Daro_1381 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1592 DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1907 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1636 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1633 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_3083 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Daro_0033 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Daro_1217 primosomal replication protein N K02686 priB; primosomal replication protein N C 03450 Non-homologous end-joining C 03460 Fanconi anemia pathway B B 09126 Chromosome C 03082 ATP-dependent chromatin remodeling C 03083 Polycomb repressive complex D Daro_0785 TPR repeat K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] B B 09125 Information processing in viruses C 03230 Viral genome structure C 03240 Viral replication C 03250 Viral life cycle - HIV-1 C 03260 Virion - Human immunodeficiency virus C 03271 Virion - Rotavirus C 03262 Virion - Coronavirus C 03261 Virion - Influenza virus C 03263 Virion - Enterovirus C 03264 Virion - Flavivirus C 03265 Virion - Ebolavirus and Lyssavirus C 03266 Virion - Herpesvirus C 03268 Virion - Orthopoxvirus C 03267 Virion - Adenovirus C 03259 Virion - Bacteriophages T4 and T7 C 03258 Virion - Bacteriophage lambda # A09130 Environmental Information Processing B B 09131 Membrane transport C 02010 ABC transporters [PATH:dar02010] D Daro_3693 Thiosulphate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D Daro_2134 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Daro_3692 Sulphate transport system permease protein 2:Sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Daro_3691 Sulphate transport system permease protein 2:Sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Daro_3690 Sulphate transport system permease protein 1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Daro_0830 Twin-arginine translocation pathway signal K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D Daro_0831 Nitrate transport permease K15577 nrtB; nitrate/nitrite transport system permease protein D Daro_0832 Nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D Daro_1476 Molybdenum ABC transporter, periplasmic binding protein K02020 modA; molybdate transport system substrate-binding protein D Daro_2783 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Daro_2784 Molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Daro_1056 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Daro_1200 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Daro_1198 Binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Daro_1197 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Daro_3398 Toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein D Daro_1208 Mammalian cell entry related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Daro_3400 Mammalian cell entry related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Daro_1206 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Daro_3401 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Daro_3397 NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D Daro_1207 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Daro_3402 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Daro_2488 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Daro_3562 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Daro_4070 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Daro_3563 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Daro_3564 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Daro_3565 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Daro_1826 Phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein D Daro_1824 Phosphonate uptake transporter K02042 phnE; phosphonate transport system permease protein D Daro_1825 ABC transporter related protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Daro_2357 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_4096 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_4097 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_4043 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0270 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2772 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0253 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0376 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2947 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0524 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2712 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0900 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0904 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_3241 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2359 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_2771 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_0367 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_4044 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_0271 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_3236 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_0251 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_4098 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0908 amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_4045 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_2770 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_0252 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_0366 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_3235 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0272 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_2358 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_2360 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_4046 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0365 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0250 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0273 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_2769 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_4047 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0254 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0364 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0274 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0909 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_2356 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_2768 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_3234 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_4099 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_1443 amino acid/amide ABC transporter substrate-binding protein, HAAT family K11959 urtA; urea transport system substrate-binding protein D Daro_1437 amino acid/amide ABC transporter membrane protein 1, HAAT family K11960 urtB; urea transport system permease protein D Daro_1436 amino acid/amide ABC transporter membrane protein 2, HAAT family K11961 urtC; urea transport system permease protein D Daro_1435 ABC transporter related protein K11962 urtD; urea transport system ATP-binding protein D Daro_1434 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K11963 urtE; urea transport system ATP-binding protein D Daro_1696 Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D Daro_1697 Cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Daro_1695 Cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein D Daro_1694 Cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Daro_4165 ABC-2 type transporter, NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D Daro_4160 ABC transporter related protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D Daro_2836 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Daro_2835 Lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Daro_3994 heme exporter protein D K02196 ccmD; heme exporter protein D D Daro_3993 Cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C D Daro_3992 Cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B D Daro_3991 Heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Daro_3081 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein D Daro_3080 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein D Daro_4150 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Daro_3716 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Daro_3717 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Daro_0154 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Daro_0348 ABC transporter, transmembrane region:ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Daro_3202 ABC transporter, transmembrane region:ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Daro_0045 ABC transporter related protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein C 02060 Phosphotransferase system (PTS) [PATH:dar02060] D Daro_4084 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Daro_4083 Phosphoryl transfer system, HPr K02784 ptsH; phosphocarrier protein HPr D Daro_4082 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Daro_1083 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Daro_4147 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] C 03070 Bacterial secretion system [PATH:dar03070] D Daro_3926 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Daro_1165 Outer membrane efflux protein K12340 tolC; outer membrane protein D Daro_3216 type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal K02453 gspD; general secretion pathway protein D D Daro_3405 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D Daro_3222 type II secretion system protein K02455 gspF; general secretion pathway protein F D Daro_3217 Prokaryotic N-terminal methylation site K02456 gspG; general secretion pathway protein G D Daro_3218 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Daro_3221 General secretion pathway protein G K02456 gspG; general secretion pathway protein G D Daro_3223 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Daro_1151 type II secretion system protein E:General secretory system II, protein E, N-terminal K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Daro_3407 type II secretion system protein E:General secretory system II, protein E, N-terminal K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Daro_3280 SecD/SecF/SecDF export membrane protein:SecD export membrane protein K03072 secD; preprotein translocase subunit SecD D Daro_3281 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Daro_0306 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Daro_0948 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Daro_0339 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Daro_3279 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Daro_4201 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Daro_3488 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Daro_3718 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Daro_0613 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Daro_0642 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Daro_3375 Twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA D Daro_3374 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Daro_3373 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC D Daro_2169 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Daro_2182 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Daro_0391 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Daro_0394 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Daro_2175 Protein of unknown function DUF796 K11903 hcp; type VI secretion system secreted protein Hcp D Daro_2179 putative lipoprotein K11906 vasD; type VI secretion system protein VasD D Daro_2188 ImcF-related:Protein of unknown function DUF1215 K11891 impL; type VI secretion system protein ImpL D Daro_2181 putative membrane protein K11892 impK; type VI secretion system protein ImpK D Daro_2171 AAA ATPase, central region:Clp, N terminal K11907 vasG; type VI secretion system protein VasG B B 09132 Signal transduction C 02020 Two-component system [PATH:dar02020] D Daro_3568 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Daro_3567 Phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Daro_1632 Response regulator receiver K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Daro_3229 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Daro_2488 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Daro_3562 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Daro_4070 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Daro_1979 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Daro_3147 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D Daro_2024 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Daro_1900 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Daro_3177 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D Daro_3176 two component transcriptional regulator, winged helix family K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D Daro_2957 Secretion protein HlyD K07799 mdtA; membrane fusion protein, multidrug efflux system D Daro_2258 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Daro_2473 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Daro_2259 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D Daro_2474 Heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D Daro_2477 conserved hypothetical protein K07810 cusF; Cu(I)/Ag(I) efflux system periplasmic protein CusF D Daro_2264 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system D Daro_2479 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system D Daro_2265 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein D Daro_2480 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein D Daro_2596 hypothetical protein K02402 flhC; flagellar transcriptional activator FlhC D Daro_2305 hypothetical protein K02402 flhC; flagellar transcriptional activator FlhC D Daro_0784 Flagellin, C-terminal:Flagellin, N-terminal K02406 fliC; flagellin D Daro_0743 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Daro_0722 chemotaxis motA protein K02556 motA; chemotaxis protein MotA D Daro_0744 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Daro_1080 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Daro_3558 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Daro_3557 Response regulator receiver:Transcriptional regulatory protein, C-terminal K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Daro_1079 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Daro_1087 K+ transporting ATPase, A subunit K01546 kdpA; potassium-transporting ATPase potassium-binding subunit D Daro_1086 ATPase, E1-E2 type:Potassium-translocating P-type ATPase, B subunit K01547 kdpB; potassium-transporting ATPase ATP-binding subunit [EC:7.2.2.6] D Daro_1085 K+ transporting ATPase, KdpC subunit K01548 kdpC; potassium-transporting ATPase KdpC subunit D Daro_1580 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D Daro_1181 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D Daro_1462 Cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Daro_0001 chromosomal replication initiator protein, DnaA K02313 dnaA; chromosomal replication initiator protein D Daro_2868 malyl-CoA lyase or citrate lyase, beta subunit K01644 citE; citrate lyase subunit beta / citryl-CoA lyase [EC:4.1.3.34] D Daro_4182 Anaerobic c4-dicarboxylate membrane transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D Daro_3680 Histidine kinase internal region K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D Daro_3679 transcriptional regulator, LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR D Daro_0833 GAF:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerization and phosphoacceptor region K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Daro_0834 regulatory protein, LuxR:Response regulator receiver K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Daro_1029 signal transduction histidine kinase, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D Daro_1030 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Daro_1739 Protein-P-II uridylyltransferase K00990 glnD; [protein-PII] uridylyltransferase [EC:2.7.7.59] D Daro_1291 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Daro_0297 nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1 D Daro_2251 hypothetical protein K04751 glnB; nitrogen regulatory protein P-II 1 D Daro_3759 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Daro_3758 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Daro_0077 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_3763 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_0030 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Daro_0031 Helix-turn-helix, Fis-type K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Daro_1487 Helix-turn-helix, Fis-type:Nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein D Daro_2923 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D Daro_2600 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Daro_2585 Helix-turn-helix, Fis-type K07714 atoC; two-component system, NtrC family, response regulator AtoC D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_2150 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D Daro_0478 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D Daro_0477 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D Daro_2148 Helix-turn-helix, Fis-type K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D Daro_2994 Sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D Daro_0661 signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Daro_0662 Helix-turn-helix, Fis-type K02667 pilR; two-component system, NtrC family, response regulator PilR D Daro_4149 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Daro_3356 Fimbrial protein pilin:Bacterial general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA D Daro_1802 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Daro_1804 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Daro_2888 NADH ubiquinone oxidoreductase, 20 kDa subunit K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D Daro_3961 uptake hydrogenase accessory protein hupU K23548 hupU; uptake hydrogenase small subunit [EC:1.12.99.6] D Daro_2889 Nickel-dependent hydrogenase, large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D Daro_3960 Nickel-dependent hydrogenase, large subunit K23549 hupV; uptake hydrogenase large subunit [EC:1.12.99.6] D Daro_3946 PAS/PAC sensor signal transduction histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3] D Daro_3962 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA D Daro_3974 Ni-Fe hydrogenase, small subunit:Twin-arginine translocation pathway signal K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Daro_3989 Ni-Fe hydrogenase, small subunit:Twin-arginine translocation pathway signal K06282 hyaA; hydrogenase small subunit [EC:1.12.99.6] D Daro_3971 Nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Daro_3988 Nickel-dependent hydrogenase, large subunit K06281 hyaB; hydrogenase large subunit [EC:1.12.99.6] D Daro_3987 Nickel-dependent hydrogenase b-type cytochrome subunit K03620 hyaC; Ni/Fe-hydrogenase 1 B-type cytochrome subunit D Daro_1146 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Daro_0730 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Daro_2045 CheB methylesterase:MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Daro_0728 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0724 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0729 PAS protein K03406 mcp; methyl-accepting chemotaxis protein D Daro_1902 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_2728 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0926 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_2933 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_3097 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_1143 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_3112 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0837 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0561 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_1140 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_2834 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0674 PAS protein K03776 aer; aerotaxis receptor D Daro_1363 PAS protein K03776 aer; aerotaxis receptor D Daro_1144 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW D Daro_0727 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW D Daro_0726 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_0738 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_1142 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_1596 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0725 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0736 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0555 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_1139 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_3542 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_1148 CheB methylesterase:Response regulator receiver K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Daro_0732 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Daro_0734 Response regulator receiver:CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Daro_0735 Response regulator receiver:CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Daro_3896 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D Daro_3897 CheW protein K02659 pilI; twitching motility protein PilI D Daro_3895 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Daro_3899 Response regulator receiver K02657 pilG; twitching motility two-component system response regulator PilG D Daro_3898 Response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH D Daro_2995 PAS/PAC sensor signal transduction histidine kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3] D Daro_2996 regulatory protein, LuxR:Response regulator receiver K11712 dctR; two-component system, LuxR family, response regulator DctR D Daro_2993 TRAP dicarboxylate transporter-DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP D Daro_2992 Tripartite ATP-independent periplasmic transporter, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Daro_2991 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Daro_3576 TRAP C4-dicarboxylate transport system permease DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Daro_3389 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Daro_4021 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Daro_2490 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D Daro_0685 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Daro_2491 regulatory protein, LuxR:Response regulator receiver K14987 fixJ; two-component system, LuxR family, response regulator FixJ D Daro_0774 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Daro_0775 Helix-turn-helix, Fis-type K10943 flrC; two-component system, response regulator FlrC D Daro_2902 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain K13815 rpfG; two-component system, response regulator RpfG D Daro_1294 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Daro_0248 Cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Daro_3546 Cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Daro_1586 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Daro_1585 Helix-turn-helix, Fis-type K15012 regA; two-component system, response regulator RegA D Daro_0809 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] D Daro_0810 Cytochrome b/b6, N-terminal:Cytochrome b/b6, C-terminal K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Daro_0811 Cytochrome c1 K00413 CYC1; ubiquinol-cytochrome c reductase cytochrome c1 subunit D Daro_1584 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_2126 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_3321 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_0692 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_1006 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_1570 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_0304 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_1022 cytochrome c-552 precursor K08738 CYC; cytochrome c D Daro_1401 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_3346 Cytochrome c, class I K08738 CYC; cytochrome c D Daro_0713 Cytochrome c oxidase cbb3-type, subunit I K00404 ccoN; cytochrome c oxidase cbb3-type subunit I [EC:7.1.1.9] D Daro_0714 Cytochrome C oxidase, mono-heme subunit/FixO K00405 ccoO; cytochrome c oxidase cbb3-type subunit II D Daro_0715 Cbb3-type cytochrome oxidase component K00407 ccoQ; cytochrome c oxidase cbb3-type subunit IV D Daro_0716 Cytochrome c oxidase cbb3-type, subunit III K00406 ccoP; cytochrome c oxidase cbb3-type subunit III D Daro_3926 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Daro_1165 Outer membrane efflux protein K12340 tolC; outer membrane protein D Daro_2397 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Daro_2004 protein tyrosine phosphatase K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48] D Daro_1265 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Daro_2402 UDP-N-acetylglucosamine 2-epimerase K01791 wecB; UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing) [EC:5.1.3.14] D Daro_1833 FecR protein K07165 fecR; transmembrane sensor D Daro_0460 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_3686 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_3308 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_4037 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_2901 Hpt K20976 hptB; histidine phosphotransfer protein HptB D Daro_0347 PAS protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Daro_0106 Stage II sporulation E K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Daro_0733 Sulfate transporter/antisigma-factor antagonist STAS K20978 hsbA; HptB-dependent secretion and biofilm anti anti-sigma factor D Daro_0747 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM C 04010 MAPK signaling pathway C 04013 MAPK signaling pathway - fly C 04016 MAPK signaling pathway - plant C 04011 MAPK signaling pathway - yeast C 04012 ErbB signaling pathway C 04014 Ras signaling pathway C 04015 Rap1 signaling pathway C 04310 Wnt signaling pathway C 04330 Notch signaling pathway C 04340 Hedgehog signaling pathway C 04341 Hedgehog signaling pathway - fly C 04350 TGF-beta signaling pathway C 04390 Hippo signaling pathway C 04391 Hippo signaling pathway - fly C 04392 Hippo signaling pathway - multiple species C 04370 VEGF signaling pathway C 04371 Apelin signaling pathway C 04630 JAK-STAT signaling pathway C 04064 NF-kappa B signaling pathway C 04668 TNF signaling pathway C 04066 HIF-1 signaling pathway C 04068 FoxO signaling pathway C 04020 Calcium signaling pathway C 04070 Phosphatidylinositol signaling system C 04072 Phospholipase D signaling pathway C 04071 Sphingolipid signaling pathway C 04024 cAMP signaling pathway C 04022 cGMP-PKG signaling pathway C 04151 PI3K-Akt signaling pathway C 04152 AMPK signaling pathway C 04150 mTOR signaling pathway C 04075 Plant hormone signal transduction B B 09133 Signaling molecules and interaction C 04080 Neuroactive ligand-receptor interaction C 04060 Cytokine-cytokine receptor interaction C 04061 Viral protein interaction with cytokine and cytokine receptor C 04512 ECM-receptor interaction C 04514 Cell adhesion molecules # A09140 Cellular Processes B B 09141 Transport and catabolism C 04144 Endocytosis C 04145 Phagosome C 04142 Lysosome C 04146 Peroxisome C 04140 Autophagy - animal C 04138 Autophagy - yeast C 04136 Autophagy - other C 04137 Mitophagy - animal C 04139 Mitophagy - yeast C 04148 Efferocytosis [PATH:dar04148] D Daro_2468 arginase K01476 E3.5.3.1; arginase [EC:3.5.3.1] D Daro_0809 Ubiquinol-cytochrome c reductase, iron-sulfur subunit K00411 UQCRFS1; ubiquinol-cytochrome c reductase iron-sulfur subunit [EC:7.1.1.8] B B 09143 Cell growth and death C 04110 Cell cycle C 04111 Cell cycle - yeast C 04112 Cell cycle - Caulobacter C 04113 Meiosis - yeast C 04114 Oocyte meiosis C 04210 Apoptosis C 04214 Apoptosis - fly C 04215 Apoptosis - multiple species C 04216 Ferroptosis C 04217 Necroptosis C 04115 p53 signaling pathway C 04218 Cellular senescence B B 09144 Cellular community - eukaryotes C 04510 Focal adhesion C 04520 Adherens junction C 04530 Tight junction C 04540 Gap junction C 04550 Signaling pathways regulating pluripotency of stem cells B B 09145 Cellular community - prokaryotes C 02024 Quorum sensing [PATH:dar02024] D Daro_2980 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Daro_3481 anthranilate synthase, component I K01657 trpE; anthranilate synthase component I [EC:4.1.3.27] D Daro_3477 anthranilate synthase, component II K01658 trpG; anthranilate synthase component II [EC:4.1.3.27] D Daro_1964 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Daro_3324 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase K01626 E2.5.1.54; 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] D Daro_1802 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Daro_1804 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Daro_2596 hypothetical protein K02402 flhC; flagellar transcriptional activator FlhC D Daro_2305 hypothetical protein K02402 flhC; flagellar transcriptional activator FlhC D Daro_3557 Response regulator receiver:Transcriptional regulatory protein, C-terminal K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Daro_1079 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Daro_2357 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_4096 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_4097 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_4043 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0270 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2772 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0253 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0376 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2947 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0524 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2712 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0900 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0904 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_3241 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2359 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_2771 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_0367 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_4044 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_0271 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_3236 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_0251 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_4098 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0908 amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_4045 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_2770 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_0252 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_0366 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_3235 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0272 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_2358 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_2360 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_4046 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0365 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0250 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0273 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_2769 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_4047 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0254 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0364 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0274 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0909 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_2356 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_2768 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_3234 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_4099 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_3199 VCBS protein K20276 bapA; large repetitive protein D Daro_2355 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_1553 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_0249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_2902 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain K13815 rpfG; two-component system, response regulator RpfG D Daro_1294 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Daro_0248 Cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Daro_3546 Cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Daro_0605 5-amino-6-(5-phosphoribosylamino)uracil reductase / diaminohydroxyphosphoribosylaminopyrimidine deaminase K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] D Daro_2162 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system D Daro_1224 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Daro_1317 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Daro_1318 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Daro_1319 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal K02031 ddpD; peptide/nickel transport system ATP-binding protein D Daro_4201 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Daro_0306 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Daro_0948 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Daro_0339 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Daro_3279 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Daro_3488 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Daro_3718 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Daro_0613 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Daro_0642 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] C 05111 Biofilm formation - Vibrio cholerae C 02025 Biofilm formation - Pseudomonas aeruginosa C 02026 Biofilm formation - Escherichia coli B B 09142 Cell motility C 02030 Bacterial chemotaxis [PATH:dar02030] D Daro_0728 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0724 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0729 PAS protein K03406 mcp; methyl-accepting chemotaxis protein D Daro_1902 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_2728 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0926 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_2933 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_3097 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_1143 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_3112 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0837 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0561 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_1140 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_2834 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0674 PAS protein K03776 aer; aerotaxis receptor D Daro_1363 PAS protein K03776 aer; aerotaxis receptor D Daro_0726 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_0738 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_1142 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_1144 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW D Daro_0727 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW D Daro_1596 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0725 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0736 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0555 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_1139 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_3542 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0737 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D Daro_1148 CheB methylesterase:Response regulator receiver K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Daro_0732 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Daro_2045 CheB methylesterase:MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Daro_0734 Response regulator receiver:CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Daro_0735 Response regulator receiver:CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Daro_1145 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Daro_0731 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Daro_1147 probable chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Daro_1146 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Daro_0730 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Daro_0772 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Daro_0766 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Daro_0765 Type III secretion system outer membrane O protein K02417 fliN; flagellar motor switch protein FliN D Daro_0722 chemotaxis motA protein K02556 motA; chemotaxis protein MotA D Daro_0744 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Daro_0723 OmpA/MotB K02557 motB; chemotaxis protein MotB D Daro_0745 OmpA/MotB K02557 motB; chemotaxis protein MotB C 02040 Flagellar assembly [PATH:dar02040] D Daro_0776 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Daro_0773 Flagellar FliF M-ring protein K02409 fliF; flagellar M-ring protein FliF D Daro_0772 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Daro_0771 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Daro_0770 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Daro_0769 Flagellar FliJ and related protein K02413 fliJ; flagellar protein FliJ D Daro_0768 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Daro_0767 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Daro_1846 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Daro_0766 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Daro_0765 Type III secretion system outer membrane O protein K02417 fliN; flagellar motor switch protein FliN D Daro_0764 Flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D Daro_0763 Flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Daro_0762 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Daro_0761 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Daro_0740 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Daro_0739 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Daro_0748 flagellar protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Daro_2272 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Daro_0749 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Daro_0750 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Daro_0751 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Daro_0752 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE K02390 flgE; flagellar hook protein FlgE D Daro_0753 Protein of unknown function DUF1078 K02391 flgF; flagellar basal-body rod protein FlgF D Daro_0754 Protein of unknown function DUF1078 K02392 flgG; flagellar basal-body rod protein FlgG D Daro_0755 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Daro_0756 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Daro_0757 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ D Daro_0758 Protein of unknown function DUF1078 K02396 flgK; flagellar hook-associated protein 1 D Daro_0759 Flagellin, N-terminal K02397 flgL; flagellar hook-associated protein 3 FlgL D Daro_0784 Flagellin, C-terminal:Flagellin, N-terminal K02406 fliC; flagellin D Daro_0782 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal K02407 fliD; flagellar hook-associated protein 2 D Daro_0781 Flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Daro_0722 chemotaxis motA protein K02556 motA; chemotaxis protein MotA D Daro_0744 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Daro_0723 OmpA/MotB K02557 motB; chemotaxis protein MotB D Daro_0745 OmpA/MotB K02557 motB; chemotaxis protein MotB D Daro_0747 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Daro_0746 FlgN K02399 flgN; flagellar biosynthesis protein FlgN D Daro_0526 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Daro_2596 hypothetical protein K02402 flhC; flagellar transcriptional activator FlhC D Daro_2305 hypothetical protein K02402 flhC; flagellar transcriptional activator FlhC D Daro_4149 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Daro_0775 Helix-turn-helix, Fis-type K10943 flrC; two-component system, response regulator FlrC D Daro_0743 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA C 04814 Motor proteins C 04820 Cytoskeleton in muscle cells [PATH:dar04820] D Daro_1851 ATPase, E1-E2 type K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13] D Daro_2364 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] C 04810 Regulation of actin cytoskeleton # A09150 Organismal Systems B B 09151 Immune system C 04640 Hematopoietic cell lineage C 04610 Complement and coagulation cascades C 04611 Platelet activation C 04613 Neutrophil extracellular trap formation C 04620 Toll-like receptor signaling pathway C 04624 Toll and Imd signaling pathway C 04621 NOD-like receptor signaling pathway C 04622 RIG-I-like receptor signaling pathway C 04623 Cytosolic DNA-sensing pathway C 04625 C-type lectin receptor signaling pathway C 04650 Natural killer cell mediated cytotoxicity C 04612 Antigen processing and presentation C 04660 T cell receptor signaling pathway C 04658 Th1 and Th2 cell differentiation C 04659 Th17 cell differentiation C 04657 IL-17 signaling pathway C 04662 B cell receptor signaling pathway C 04664 Fc epsilon RI signaling pathway C 04666 Fc gamma R-mediated phagocytosis C 04670 Leukocyte transendothelial migration C 04672 Intestinal immune network for IgA production C 04062 Chemokine signaling pathway B B 09152 Endocrine system C 04911 Insulin secretion C 04910 Insulin signaling pathway C 04922 Glucagon signaling pathway C 04923 Regulation of lipolysis in adipocytes C 04920 Adipocytokine signaling pathway C 03320 PPAR signaling pathway C 04929 GnRH secretion C 04912 GnRH signaling pathway C 04913 Ovarian steroidogenesis C 04915 Estrogen signaling pathway C 04914 Progesterone-mediated oocyte maturation C 04917 Prolactin signaling pathway C 04921 Oxytocin signaling pathway C 04926 Relaxin signaling pathway C 04935 Growth hormone synthesis, secretion and action C 04918 Thyroid hormone synthesis C 04919 Thyroid hormone signaling pathway C 04928 Parathyroid hormone synthesis, secretion and action C 04916 Melanogenesis C 04924 Renin secretion C 04614 Renin-angiotensin system C 04925 Aldosterone synthesis and secretion C 04927 Cortisol synthesis and secretion B B 09153 Circulatory system C 04260 Cardiac muscle contraction C 04261 Adrenergic signaling in cardiomyocytes C 04270 Vascular smooth muscle contraction B B 09154 Digestive system C 04970 Salivary secretion C 04971 Gastric acid secretion C 04972 Pancreatic secretion C 04976 Bile secretion C 04973 Carbohydrate digestion and absorption C 04974 Protein digestion and absorption C 04975 Fat digestion and absorption C 04979 Cholesterol metabolism C 04977 Vitamin digestion and absorption C 04980 Cobalamin transport and metabolism [PATH:dar04980] D Daro_3318 ATP:cob(I)alamin adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17] D Daro_4005 methylmalonyl-CoA mutase metallochaperone MeaB K07588 MMAA; GTPase [EC:3.6.5.-] D Daro_4006 methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2] D Daro_0046 methionine synthase (B12-dependent) K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13] C 04978 Mineral absorption B B 09155 Excretory system C 04962 Vasopressin-regulated water reabsorption C 04960 Aldosterone-regulated sodium reabsorption C 04961 Endocrine and other factor-regulated calcium reabsorption C 04964 Proximal tubule bicarbonate reclamation C 04966 Collecting duct acid secretion B B 09156 Nervous system C 04724 Glutamatergic synapse C 04727 GABAergic synapse C 04725 Cholinergic synapse C 04728 Dopaminergic synapse C 04726 Serotonergic synapse C 04720 Long-term potentiation C 04730 Long-term depression C 04723 Retrograde endocannabinoid signaling C 04721 Synaptic vesicle cycle C 04722 Neurotrophin signaling pathway B B 09157 Sensory system C 04744 Phototransduction C 04745 Phototransduction - fly C 04740 Olfactory transduction C 04742 Taste transduction C 04750 Inflammatory mediator regulation of TRP channels B B 09158 Development and regeneration C 04320 Dorso-ventral axis formation C 04360 Axon guidance C 04361 Axon regeneration C 04380 Osteoclast differentiation B B 09149 Aging C 04211 Longevity regulating pathway C 04212 Longevity regulating pathway - worm C 04213 Longevity regulating pathway - multiple species B B 09159 Environmental adaptation C 04710 Circadian rhythm C 04713 Circadian entrainment C 04711 Circadian rhythm - fly C 04712 Circadian rhythm - plant C 04714 Thermogenesis C 04626 Plant-pathogen interaction # A09160 Human Diseases B B 09161 Cancer: overview C 05200 Pathways in cancer C 05202 Transcriptional misregulation in cancer C 05206 MicroRNAs in cancer C 05205 Proteoglycans in cancer C 05204 Chemical carcinogenesis - DNA adducts C 05207 Chemical carcinogenesis - receptor activation C 05208 Chemical carcinogenesis - reactive oxygen species C 05203 Viral carcinogenesis C 05230 Central carbon metabolism in cancer C 05231 Choline metabolism in cancer C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer B B 09162 Cancer: specific types C 05210 Colorectal cancer C 05212 Pancreatic cancer C 05225 Hepatocellular carcinoma C 05226 Gastric cancer C 05214 Glioma C 05216 Thyroid cancer C 05221 Acute myeloid leukemia C 05220 Chronic myeloid leukemia C 05217 Basal cell carcinoma C 05218 Melanoma C 05211 Renal cell carcinoma C 05219 Bladder cancer C 05215 Prostate cancer C 05213 Endometrial cancer C 05224 Breast cancer C 05222 Small cell lung cancer C 05223 Non-small cell lung cancer B B 09172 Infectious disease: viral C 05166 Human T-cell leukemia virus 1 infection C 05170 Human immunodeficiency virus 1 infection C 05161 Hepatitis B C 05160 Hepatitis C C 05171 Coronavirus disease - COVID-19 C 05164 Influenza A C 05162 Measles C 05168 Herpes simplex virus 1 infection C 05163 Human cytomegalovirus infection C 05167 Kaposi sarcoma-associated herpesvirus infection C 05169 Epstein-Barr virus infection C 05165 Human papillomavirus infection B B 09171 Infectious disease: bacterial C 05110 Vibrio cholerae infection C 05120 Epithelial cell signaling in Helicobacter pylori infection C 05130 Pathogenic Escherichia coli infection C 05132 Salmonella infection C 05131 Shigellosis C 05135 Yersinia infection C 05133 Pertussis C 05134 Legionellosis C 05150 Staphylococcus aureus infection C 05152 Tuberculosis C 05100 Bacterial invasion of epithelial cells B B 09174 Infectious disease: parasitic C 05146 Amoebiasis C 05144 Malaria C 05145 Toxoplasmosis C 05140 Leishmaniasis C 05142 Chagas disease C 05143 African trypanosomiasis B B 09163 Immune disease C 05310 Asthma C 05322 Systemic lupus erythematosus C 05323 Rheumatoid arthritis C 05320 Autoimmune thyroid disease C 05321 Inflammatory bowel disease C 05330 Allograft rejection C 05332 Graft-versus-host disease C 05340 Primary immunodeficiency B B 09164 Neurodegenerative disease C 05010 Alzheimer disease C 05012 Parkinson disease C 05014 Amyotrophic lateral sclerosis C 05016 Huntington disease C 05017 Spinocerebellar ataxia C 05020 Prion disease C 05022 Pathways of neurodegeneration - multiple diseases B B 09165 Substance dependence C 05030 Cocaine addiction C 05031 Amphetamine addiction C 05032 Morphine addiction C 05033 Nicotine addiction C 05034 Alcoholism B B 09166 Cardiovascular disease C 05417 Lipid and atherosclerosis C 05418 Fluid shear stress and atherosclerosis C 05410 Hypertrophic cardiomyopathy C 05412 Arrhythmogenic right ventricular cardiomyopathy C 05414 Dilated cardiomyopathy C 05415 Diabetic cardiomyopathy C 05416 Viral myocarditis B B 09167 Endocrine and metabolic disease C 04930 Type II diabetes mellitus C 04940 Type I diabetes mellitus C 04950 Maturity onset diabetes of the young C 04936 Alcoholic liver disease C 04932 Non-alcoholic fatty liver disease C 04931 Insulin resistance C 04933 AGE-RAGE signaling pathway in diabetic complications C 04934 Cushing syndrome B B 09175 Drug resistance: antimicrobial C 01501 beta-Lactam resistance [PATH:dar01501] D Daro_0128 Major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Daro_2034 Glycoside hydrolase, family 3, N-terminal K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52] D Daro_2160 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Daro_2161 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Daro_2162 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system D Daro_3926 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Daro_1165 Outer membrane efflux protein K12340 tolC; outer membrane protein D Daro_0209 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Daro_1016 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Daro_0113 cell elongation-specific peptidoglycan D,D-transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Daro_3504 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] C 01502 Vancomycin resistance [PATH:dar01502] D Daro_3496 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Daro_1986 Alanine racemase region K01775 alr; alanine racemase [EC:5.1.1.1] D Daro_3502 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10] D Daro_3501 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Daro_3498 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:dar01503] D Daro_0471 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Daro_3049 Cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Daro_0043 Cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Daro_2024 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Daro_1900 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Daro_3864 Twin-arginine translocation pathway signal K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Daro_2160 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Daro_2161 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Daro_3926 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Daro_1165 Outer membrane efflux protein K12340 tolC; outer membrane protein D Daro_1754 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] B B 09176 Drug resistance: antineoplastic C 01521 EGFR tyrosine kinase inhibitor resistance C 01524 Platinum drug resistance C 01523 Antifolate resistance C 01522 Endocrine resistance # A09180 Brite Hierarchies B B 09181 Protein families: metabolism C 01000 Enzymes [BR:dar01000] C 01001 Protein kinases [BR:dar01001] D Daro_1866 Protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Daro_0438 Protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Daro_0925 Cyclic nucleotide-binding:Protein kinase K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Daro_1602 Protein kinase:GAF K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1] D Daro_1990 sensor histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Daro_2399 probable exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Daro_3568 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Daro_1979 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Daro_3147 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D Daro_3177 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D Daro_2258 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Daro_2473 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Daro_1080 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Daro_3558 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Daro_1580 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D Daro_1181 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D Daro_2816 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Daro_2297 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Daro_0833 GAF:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerization and phosphoacceptor region K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Daro_1029 signal transduction histidine kinase, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D Daro_3680 Histidine kinase internal region K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D Daro_2094 GAF:ATP-binding region, ATPase-like:Histidine kinase internal region:5TM Receptors of the LytS-YhcK type, transmembrane region K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Daro_3759 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Daro_0030 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Daro_0661 signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Daro_1802 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Daro_2150 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D Daro_0478 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D Daro_3946 PAS/PAC sensor signal transduction histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3] D Daro_3017 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_0965 PAS:Hemerythrin HHE cation binding region K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_0967 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_2924 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_1828 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_2601 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_0726 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_0738 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_1142 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_3895 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Daro_2995 PAS/PAC sensor signal transduction histidine kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3] D Daro_2490 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D Daro_0685 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Daro_0774 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Daro_1586 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Daro_0460 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_3686 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_3308 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_4037 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_3006 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_0420 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_0223 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_0008 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2890 Peptidase M52, hydrogen uptake protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2891 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2934 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2946 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_1441 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_0937 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2105 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_3714 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_3872 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_3459 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_3350 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 01009 Protein phosphatases and associated proteins [BR:dar01009] D Daro_0186 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Daro_1127 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein K04079 HSP90A; molecular chaperone HtpG D Daro_0437 Protein phosphatase 2C-like protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Daro_3360 Protein phosphatase 2C-like protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Daro_3850 Protein phosphatase 2C-like protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Daro_3311 Protein phosphatase 2C-like protein K20074 prpC; PPM family protein phosphatase [EC:3.1.3.16] D Daro_1962 phosphoserine phosphatase K01079 serB; phosphoserine phosphatase [EC:3.1.3.3] C 01002 Peptidases and inhibitors [BR:dar01002] D Daro_2630 Peptidase A8, signal peptidase II K03101 lspA; signal peptidase II [EC:3.4.23.36] D Daro_3045 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] D Daro_2624 signal peptidase II, Aspartic peptidase, MEROPS family A08 K03101 lspA; signal peptidase II [EC:3.4.23.36] D Daro_0637 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Daro_3986 Hydrogenase 1 maturation peptidase HyaD, Aspartic peptidase, MEROPS family A31 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Daro_3970 Hydrogenase 2 maturation peptidase, Aspartic peptidase, MEROPS family A31 K03605 hyaD; hydrogenase maturation protease [EC:3.4.23.-] D Daro_3617 Peptidase C14, caspase catalytic subunit p20 K22684 MCA1; metacaspase-1 [EC:3.4.22.-] D Daro_2337 GMP synthase (glutamine-hydrolyzing) K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] D Daro_2112 Glutamine amidotransferase class-I:Peptidase C26 K07010 K07010; putative glutamine amidotransferase D Daro_0876 amidophosphoribosyltransferase K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14] D Daro_0217 glutamate synthase (NADH) large subunit K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13] D Daro_3931 glutamine--fructose-6-phosphate transaminase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16] D Daro_2408 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Daro_2428 asparagine synthase (glutamine-hydrolysing) K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Daro_1275 Asparagine synthase, glutamine-hydrolyzing K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] D Daro_0025 Peptidase C56, PfpI K05520 yhbO; deglycase [EC:3.5.1.124] D Daro_3676 alanyl aminopeptidase, Metallo peptidase, MEROPS family M01 K01256 pepN; aminopeptidase N [EC:3.4.11.2] D Daro_3646 oligopeptidase A, Metallo peptidase, MEROPS family M03A K01414 prlC; oligopeptidase A [EC:3.4.24.70] D Daro_2191 conserved hypothetical protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D Daro_3719 Peptidase M16, C-terminal:Peptidase M16, N-terminal K07263 pqqL; zinc protease [EC:3.4.24.-] D Daro_3721 Peptidase M16, C-terminal:Peptidase M16, N-terminal K07263 pqqL; zinc protease [EC:3.4.24.-] D Daro_3082 aminopeptidase A, Metallo peptidase, MEROPS family M17 K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Daro_2961 Peptidase M17, leucyl aminopeptidase, C-terminal K01255 CARP; leucyl aminopeptidase [EC:3.4.11.1] D Daro_1724 succinyldiaminopimelate desuccinylase K01439 dapE; succinyl-diaminopimelate desuccinylase [EC:3.5.1.18] D Daro_1720 Peptidase M20C, Xaa-His dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-] D Daro_2485 Peptidase M24A, methionine aminopeptidase, subfamily 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Daro_1740 methionine aminopeptidase, type I K01265 map; methionyl aminopeptidase [EC:3.4.11.18] D Daro_3662 aminopeptidase P, Metallo peptidase, MEROPS family M24B K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9] D Daro_0944 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Daro_3002 Peptidase M48, Ste24p K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D Daro_0293 Heat shock protein, Metallo peptidase, MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Daro_0023 Heat shock protein, Metallo peptidase, MEROPS family M48B K03799 htpX; heat shock protein HtpX [EC:3.4.24.-] D Daro_0474 Peptidase M48, Ste24p K07387 K07387; metalloprotease [EC:3.4.24.-] D Daro_3089 Peptidase M48, Ste24p K01423 bepA; beta-barrel assembly-enhancing protease [EC:3.4.-.-] D Daro_1749 Peptidase M50, putative membrane-associated zinc metallopeptidase K11749 rseP; regulator of sigma E protease [EC:3.4.24.-] D Daro_2829 Protein of unknown function DUF980 K09933 mtfA; MtfA peptidase D Daro_2024 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Daro_1900 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Daro_3371 Peptidase S1 and S6, chymotrypsin/Hap:PDZ/DHR/GLGF K04772 degQ; serine protease DegQ [EC:3.4.21.-] D Daro_0291 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Daro_0667 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Daro_0423 D-Ala-D-Ala carboxypeptidase PBP3, Serine peptidase, MEROPS family S13 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Daro_1718 ATP-dependent Clp protease proteolytic subunit ClpP K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Daro_1926 conserved hypothetical protein K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] D Daro_1716 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Daro_3951 AAA ATPase, central region K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53] D Daro_1939 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Daro_2027 signal peptidase I, Serine peptidase, MEROPS family S26A K03100 lepB; signal peptidase I [EC:3.4.21.89] D Daro_1698 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Daro_1031 prolyl aminopeptidase, Serine peptidase, MEROPS family S33 K01259 pip; proline iminopeptidase [EC:3.4.11.5] D Daro_2146 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Daro_0608 Peptidase S41A, C-terminal protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102] D Daro_2009 Peptidase S49 K04773 sppA; protease IV [EC:3.4.21.-] D Daro_0203 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B K01419 hslV; ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] D Daro_0179 Peptidase U32 K08303 prtC; U32 family peptidase [EC:3.4.-.-] D Daro_1796 Peptidase U32 K24847 rlhA; 23S rRNA 5-hydroxycytidine C2501 synthase D Daro_0108 Peptidase U32 K24845 ubiV; O2-independent ubiquinone biosynthesis protein UbiV D Daro_0109 Peptidase U32 K24844 ubiU; O2-independent ubiquinone biosynthesis protein UbiU D Daro_0597 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 K03592 pmbA; PmbA protein D Daro_3328 microcin-processing peptidase 2, Unknown type peptidase, MEROPS family U62 K03568 tldD; TldD protein D Daro_0389 Alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal 2 K06894 yfhM; alpha-2-macroglobulin D Daro_2977 protease FtsH subunit HflC K04087 hflC; modulator of FtsH protease HflC D Daro_2978 protease FtsH subunit HflK K04088 hflK; modulator of FtsH protease HflK C 01003 Glycosyltransferases [BR:dar01003] D Daro_0785 TPR repeat K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Daro_3547 1,2-diacylglycerol 3-glucosyltransferase K19002 mgs; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337] D Daro_0580 glycogen synthase (ADP-glucose) K00703 glgA; starch synthase [EC:2.4.1.21] D Daro_3906 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Daro_0390 Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Daro_0209 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Daro_1016 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Daro_2046 Putative carbohydrate binding:Glycosyltransferase 36:Glycosyltransferase 36 associated K13688 chvB; cyclic beta-1,2-glucan glucanotransferase [EC:2.4.1.397] C 01005 Lipopolysaccharide biosynthesis proteins [BR:dar01005] D Daro_1754 acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129] D Daro_1755 lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182] D Daro_3492 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K02535 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] D Daro_1752 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191] D Daro_3479 Phosphoesterase, PA-phosphatase related protein K12978 lpxF; lipid A 4'-phosphatase [EC:3.1.3.-] D Daro_0914 UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54] D Daro_3208 lipid-A-disaccharide kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130] D Daro_0189 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Daro_0190 lipid A biosynthesis acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-] D Daro_3927 Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] D Daro_0471 phosphatidylethanolamine:Kdo2-lipid A phosphoethanolamine transferase K03760 eptA; lipid A ethanolaminephosphotransferase [EC:2.7.8.43] D Daro_2365 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] D Daro_3206 3-deoxy-D-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38] D Daro_3419 HAD-superfamily hydrolase subfamily IIIA:Phosphatase kdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45] D Daro_3418 KpsF/GutQ K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13] D Daro_1285 D-alpha,beta-D-heptose 7-phosphate 1-kinase K21344 rfaE1; D-glycero-beta-D-manno-heptose-7-phosphate kinase [EC:2.7.1.167] D Daro_0486 Cytidyltransferase-related protein K21345 rfaE2; D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase [EC:2.7.7.70] D Daro_3928 Lipopolysaccharide heptosyltransferase I K02841 waaC; lipopolysaccharide heptosyltransferase I [EC:2.4.99.23] D Daro_3296 Lipopolysaccharide heptosyltransferase II K02843 waaF; lipopolysaccharide heptosyltransferase II [EC:2.4.99.24] D Daro_0153 Glycosyl transferase, group 1 K02844 waaG; UDP-glucose:(heptosyl)LPS alpha-1,3-glucosyltransferase [EC:2.4.1.-] D Daro_0152 Lipopolysaccharide heptosyltransferase III, putative K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Daro_0162 Glycosyl transferase, family 9 K02849 waaQ; lipopolysaccharide heptosyltransferase III [EC:2.4.99.25] D Daro_0501 phosphoheptose isomerase K03271 gmhA; D-sedoheptulose 7-phosphate isomerase [EC:5.3.1.28] D Daro_3536 D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase K03273 gmhB; D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] D Daro_1286 ADP-glyceromanno-heptose 6-epimerase precursor K03274 gmhD; ADP-L-glycero-D-manno-heptose 6-epimerase [EC:5.1.3.20] D Daro_2759 Glycosyl transferase, family 2 K20534 gtrB; polyisoprenyl-phosphate glycosyltransferase [EC:2.4.-.-] D Daro_1277 sugar transferase K13012 wbqP; O-antigen biosynthesis protein WbqP C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:dar01011] D Daro_3393 UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] D Daro_0044 UDP-N-acetylmuramate dehydrogenase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98] D Daro_3497 UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] D Daro_3500 UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9] D Daro_3503 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase K15792 murEF; MurE/MurF fusion protein [EC:6.3.2.13 6.3.2.10] D Daro_3496 D-alanine--D-alanine ligase K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4] D Daro_1986 Alanine racemase region K01775 alr; alanine racemase [EC:5.1.1.1] D Daro_3114 glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3] D Daro_3501 Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13] D Daro_3498 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227] D Daro_3911 Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27] D Daro_2302 Undecaprenyl-diphosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27] D Daro_0708 Virulence factor MVIN-like protein K03980 murJ; putative peptidoglycan lipid II flippase D Daro_0209 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Daro_1016 Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4] D Daro_0390 Penicillin-binding protein 1C K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28] D Daro_0113 cell elongation-specific peptidoglycan D,D-transpeptidase K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4] D Daro_3504 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Daro_0291 penicillin-binding protein 6, Serine peptidase, MEROPS family S11 K07258 dacC; serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] D Daro_0423 D-Ala-D-Ala carboxypeptidase PBP3, Serine peptidase, MEROPS family S13 K07259 dacB; serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:3.4.16.4 3.4.21.-] D Daro_0667 murein-DD-endopeptidase, Serine peptidase, MEROPS family S11 K07262 pbpG; serine-type D-Ala-D-Ala endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] D Daro_3906 Monofunctional biosynthetic peptidoglycan transglycosylase K03814 mtgA; monofunctional glycosyltransferase [EC:2.4.99.28] D Daro_2191 conserved hypothetical protein K17733 cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-] D Daro_4132 Lytic transglycosylase, catalytic K08309 slt; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Daro_3704 MltA:3D K08304 mltA; peptidoglycan lytic transglycosylase A [EC:4.2.2.29] D Daro_2520 Lytic murein transglycosylase B K08305 mltB; peptidoglycan lytic transglycosylase B [EC:4.2.2.29] D Daro_1320 Peptidoglycan-binding LysM:Lytic transglycosylase, catalytic K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29] D Daro_1301 Lytic transglycosylase, catalytic K18691 mltF; peptidoglycan lytic transglycosylase F [EC:4.2.2.29] D Daro_2198 Aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29] D Daro_0111 Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Daro_3173 Rare lipoprotein A K03642 rlpA; peptidoglycan lytic transglycosylase [EC:4.2.2.29] D Daro_3049 Cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Daro_0043 Cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Daro_0663 N-acetylmuramoyl-L-alanine amidase, family 2 K03806 ampD; N-acetyl-anhydromuramoyl-L-alanine amidase [EC:3.5.1.28] C 01004 Lipid biosynthesis proteins [BR:dar01004] D Daro_2016 [Acyl-carrier-protein] S-malonyltransferase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Daro_4014 Acyl transferase region K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39] D Daro_2015 3-oxoacyl-[acyl-carrier-protein] synthase III K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Daro_2368 conserved hypothetical protein K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] D Daro_4185 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Daro_2374 Beta-ketoacyl synthase K00647 fabB; 3-oxoacyl-[acyl-carrier-protein] synthase I [EC:2.3.1.41] D Daro_2019 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Daro_4170 3-oxoacyl-[acyl-carrier-protein] synthase II K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Daro_1172 Beta-ketoacyl synthase K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179] D Daro_2017 3-oxoacyl-[acyl-carrier-protein] reductase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Daro_4188 NAD-dependent epimerase/dehydratase:Short-chain dehydrogenase/reductase SDR K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] D Daro_1753 3-hydroxyacyl-[acyl-carrier-protein] dehydratase K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Daro_4174 conserved hypothetical protein K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59] D Daro_0978 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Daro_1935 Enoyl-[acyl-carrier-protein] reductase (NADH) K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10] D Daro_2714 Lipolytic enzyme, G-D-S-L K10804 tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5] D Daro_0349 Thioesterase superfamily K10806 yciA; acyl-CoA thioesterase YciA [EC:3.1.2.-] D Daro_1629 acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_2708 AMP-dependent synthetase and ligase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1] D Daro_1204 propionyl-CoA synthetase K01908 ACSS3; propionyl-CoA synthetase [EC:6.2.1.17] D Daro_0177 Acetoacetyl-CoA synthase K01907 AACS; acetoacetyl-CoA synthetase [EC:6.2.1.16] D Daro_2355 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_1553 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_0249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_2351 AMP-dependent synthetase and ligase K00666 K00666; fatty-acyl-CoA synthase [EC:6.2.1.-] D Daro_2014 phosphate:acyl-[acyl carrier protein] acyltransferase K03621 plsX; phosphate acyltransferase [EC:2.3.1.274] D Daro_0533 acyl-phosphate glycerol-3-phosphate acyltransferase K08591 plsY; acyl phosphate:glycerol-3-phosphate acyltransferase [EC:2.3.1.275] D Daro_3537 Phospholipid/glycerol acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] D Daro_3933 lyso-ornithine lipid acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] C 01008 Polyketide biosynthesis proteins [BR:dar01008] D Daro_4058 conserved hypothetical protein K21163 sgcE5; enediyne biosynthesis protein E5 C 01006 Prenyltransferases [BR:dar01006] D Daro_3060 farnesyl-diphosphate synthase K00795 ispA; farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10] D Daro_0658 Polyprenyl synthetase K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90] D Daro_1746 Undecaprenyl pyrophosphate synthetase K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31] D Daro_2706 Squalene/phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32] D Daro_3171 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Daro_3664 1,4-dihydroxy-2-naphtoate prenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74] D Daro_0413 4-hydroxybenzoate octaprenyltransferase K03179 ubiA; 4-hydroxybenzoate polyprenyltransferase [EC:2.5.1.39] D Daro_1463 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] C 01007 Amino acid related enzymes [BR:dar01007] D Daro_1321 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Daro_3447 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Daro_3769 Glutamyl-tRNA synthetase, class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Daro_3175 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Daro_2459 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Daro_0919 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Daro_3866 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Daro_0574 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Daro_3046 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Daro_3085 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Daro_0544 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Daro_2848 Lysyl-tRNA synthetase, class-2 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Daro_0634 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Daro_2984 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Daro_3534 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Daro_3535 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Daro_1300 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Daro_0644 Prolyl-tRNA synthetase, bacterial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Daro_2677 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Daro_3303 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Daro_2673 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Daro_2672 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Daro_2387 aminotransferase K14260 alaA; alanine-synthesizing transaminase [EC:2.6.1.66 2.6.1.2] D Daro_2002 aromatic amino acid aminotransferase apoenzyme K00832 tyrB; aromatic-amino-acid transaminase [EC:2.6.1.57] D Daro_3334 2-keto-4-methylthiobutyrate aminotransferase apoenzyme K14287 ybdL; methionine transaminase [EC:2.6.1.88] D Daro_1727 succinyldiaminopimelate aminotransferase apoenzyme K14267 dapC; N-succinyldiaminopimelate aminotransferase [EC:2.6.1.17] D Daro_1233 aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_3383 histidinol phosphate aminotransferase apoenzyme K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9] D Daro_2897 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47] D Daro_4129 Aminotransferase, class I and II K14155 patB; cysteine-S-conjugate beta-lyase [EC:4.4.1.13] D Daro_1679 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Daro_3033 acetylornithine aminotransferase apoenzyme K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17] D Daro_2895 aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62] D Daro_3902 glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Daro_1245 aminotransferase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] D Daro_0290 branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase K00824 dat; D-alanine transaminase [EC:2.6.1.21] D Daro_3294 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_4078 branched chain amino acid aminotransferase apoenzyme K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42] D Daro_3087 Para-aminobenzoate synthase, component I K03342 pabBC; para-aminobenzoate synthetase / 4-amino-4-deoxychorismate lyase [EC:2.6.1.85 4.1.3.38] D Daro_1231 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] D Daro_0984 phosphoserine aminotransferase apoenzyme K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52] C 00199 Cytochrome P450 C 00194 Photosynthesis proteins [BR:dar00194] D Daro_3272 Blue (type 1) copper domain K02638 petE; plastocyanin D Daro_3791 Ferredoxin K02639 petF; ferredoxin D Daro_4115 ATP synthase F1 subcomplex epsilon subunit K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon D Daro_4114 ATP synthase F1 subcomplex beta subunit K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1] D Daro_4113 ATP synthase F1 subcomplex gamma subunit K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma D Daro_4112 ATP synthase F1 subcomplex alpha subunit K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1] D Daro_4111 ATP synthase F1 subcomplex delta subunit K02113 ATPF1D; F-type H+-transporting ATPase subunit delta D Daro_4110 ATP synthase F0, subunit B K02109 ATPF0B; F-type H+-transporting ATPase subunit b D Daro_4109 ATP synthase F0 subcomplex C subunit K02110 ATPF0C; F-type H+-transporting ATPase subunit c D Daro_4108 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Daro_4107 ATP synthase protein I K02116 atpI; ATP synthase protein I B B 09182 Protein families: genetic information processing C 03000 Transcription factors [BR:dar03000] D Daro_3525 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Daro_2809 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Daro_4077 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Daro_3580 transcriptional regulator, LysR family K03566 gcvA; LysR family transcriptional regulator, glycine cleavage system transcriptional activator D Daro_0292 transcriptional regulator, LysR family K03717 nhaR; LysR family transcriptional regulator, transcriptional activator of nhaA D Daro_0017 transcriptional regulator, LysR family K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator D Daro_2910 transcriptional regulator, LysR family K13634 cysB; LysR family transcriptional regulator, cys regulon transcriptional activator D Daro_2129 regulatory protein, LysR:LysR, substrate-binding protein K13635 cbl; LysR family transcriptional regulator, cys regulon transcriptional activator D Daro_1136 transcriptional regulator, LysR family K16135 dmlR; LysR family transcriptional regulator, transcriptional activator for dmlA D Daro_3831 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D Daro_0476 transcriptional regulator, LysR family K19338 nac; LysR family transcriptional regulator, nitrogen assimilation regulatory protein D Daro_3638 transcriptional regulator, LysR family K21703 cbbR; LysR family transcriptional regulator, low CO2-responsive transcriptional regulator D Daro_2866 transcriptional regulator, GntR family K03710 K03710; GntR family transcriptional regulator D Daro_1767 transcriptional regulator, GntR family K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex D Daro_3790 transcriptional regulator, GntR family K15735 csiR; GntR family transcriptional regulator, carbon starvation induced regulator D Daro_2159 transcriptional regulator, TetR family K03577 acrR; TetR/AcrR family transcriptional regulator, acrAB operon repressor D Daro_0627 cell division inhibitor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D Daro_1100 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Daro_1527 transcriptional regulator, TetR family K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon D Daro_0512 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Daro_2110 regulatory protein, MarR K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator D Daro_0487 regulatory protein, MerR K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator D Daro_0934 ferric uptake regulator, Fur family K03711 fur; Fur family transcriptional regulator, ferric uptake regulator D Daro_0897 regulatory protein, IclR K05818 mhpR; IclR family transcriptional regulator, mhp operon transcriptional activator D Daro_1294 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Daro_0248 Cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Daro_3546 Cyclic nucleotide-binding protein K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein D Daro_1047 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Daro_3649 Cyclic nucleotide-binding:Bacterial regulatory protein, Crp K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein D Daro_1089 transcriptional regulator, Crp/Fnr family K21555 cooA; CRP/FNR family transcriptional regulator, carbon monoxide oxidation system transcription regulator D Daro_1669 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Daro_1036 Cyclic nucleotide-binding protein K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Daro_3198 transcriptional regulator, Crp/Fnr family K21563 dnr; CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator D Daro_1948 transcriptional regulator, BadM/Rrf2 family K13643 iscR; Rrf2 family transcriptional regulator, iron-sulfur cluster assembly transcription factor D Daro_2918 transcriptional regulator, BadM/Rrf2 family K13771 nsrR; Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor D Daro_2641 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Daro_0698 transcriptional regulator, ArsR family K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Daro_0401 regulatory protein, ArsR K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor D Daro_2281 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Daro_0687 transcriptional regulator, ArsR family K21903 cadC; ArsR family transcriptional regulator, lead/cadmium/zinc/bismuth-responsive transcriptional repressor D Daro_3757 Biotin--acetyl-CoA-carboxylase ligase K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] D Daro_3666 Helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Daro_1017 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Daro_1000 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 acoR; sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR D Daro_1487 Helix-turn-helix, Fis-type:Nif-specific regulatory protein K02584 nifA; Nif-specific regulatory protein D Daro_1477 Molybdenum-binding protein, N-terminal:Molybdenum-pterin binding protein K02019 modE; molybdate transport system regulatory protein D Daro_1478 Molybdenum-pterin binding protein K02019 modE; molybdate transport system regulatory protein D Daro_3947 transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Daro_0076 transcriptional regulator, CopG family K07722 nikR; CopG family transcriptional regulator, nickel-responsive regulator D Daro_2905 transcriptional regulator, BolA protein family K05527 bolA; BolA family transcriptional regulator, general stress-responsive regulator D Daro_4106 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_2219 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_2542 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_3014 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_0930 heat-inducible transcription repressor HrcA K03705 hrcA; heat-inducible transcriptional repressor D Daro_0386 Phenylacetic acid degradation operon negative regulatory protein paaX K02616 paaX; phenylacetic acid degradation operon negative regulatory protein D Daro_3891 Phosphoribosyltransferase K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9] D Daro_2566 Prophage CP4-57 regulatory K07733 alpA; prophage regulatory protein D Daro_2246 Prophage CP4-57 regulatory K07733 alpA; prophage regulatory protein D Daro_0091 negative transcriptional regulator K07734 paiB; transcriptional regulator D Daro_3893 Protein of unknown function DUF179 K07735 algH; putative transcriptional regulator D Daro_2447 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Daro_0604 Protein of unknown function DUF193 K07738 nrdR; transcriptional repressor NrdR D Daro_3507 Protein of unknown function UPF0040 K03925 mraZ; transcriptional regulator MraZ C 03021 Transcription machinery [BR:dar03021] D Daro_0345 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Daro_0312 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Daro_0313 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Daro_3844 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Daro_0526 RNA polymerase, sigma 70 subunit, RpoD K03086 rpoD; RNA polymerase primary sigma factor D Daro_2521 RNA polymerase, sigma 38 subunit, RpoS K03087 rpoS; RNA polymerase nonessential primary-like sigma factor D Daro_2124 Sigma-70 region 2:Sigma-70 region 4 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Daro_2634 RNA polymerase, sigma subunit, SigZ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Daro_3076 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Daro_2590 RNA polymerase, sigma subunit, ECF family K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Daro_2950 RNA polymerase, sigma subunit, SigZ K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Daro_2022 RNA polymerase, sigma-24 subunit, RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Daro_0521 Sigma-70 region 2:Sigma-70 region 4 K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily D Daro_3837 RNA polymerase, sigma 32 subunit, RpoH K03089 rpoH; RNA polymerase sigma-32 factor D Daro_4149 RNA polymerase, sigma 54 subunit, RpoN/SigL K03092 rpoN; RNA polymerase sigma-54 factor D Daro_0743 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Daro_2453 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Daro_3739 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Daro_0307 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Daro_0812 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal K03599 sspA; stringent starvation protein A D Daro_0813 Stringent starvation protein B K03600 sspB; stringent starvation protein B D Daro_1990 sensor histidine kinase K04757 rsbW; serine/threonine-protein kinase RsbW [EC:2.7.11.1] D Daro_2023 positive regulator of sigma(E), RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Daro_1491 positive regulator of sigma(E), RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Daro_1507 positive regulator of sigma(E), RseC/MucC K03803 rseC; sigma-E factor negative regulatory protein RseC D Daro_2447 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Daro_0940 GreA/GreB family elongation factor K03624 greA; transcription elongation factor GreA D Daro_1126 transcription elongation factor GreB K04760 greB; transcription elongation factor GreB D Daro_2998 transcription termination factor Rho K03628 rho; transcription termination factor Rho C 03019 Messenger RNA biogenesis [BR:dar03019] D Daro_2005 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Daro_0180 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Daro_2029 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Daro_2972 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Daro_0633 Guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D Daro_3001 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Daro_0878 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Daro_1820 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Daro_3310 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7] D Daro_1118 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Daro_0913 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Daro_2364 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Daro_2448 3' exoribonuclease:RNA binding S1:KH, type 1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] D Daro_2998 transcription termination factor Rho K03628 rho; transcription termination factor Rho D Daro_0923 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D Daro_0426 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Daro_2980 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Daro_2824 Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1] D Daro_0434 Protein of unknown function DUF344 K22468 ppk2; polyphosphate kinase [EC:2.7.4.34] D Daro_3182 Poly(A) polymerase, PcnB K00970 pcnB; poly(A) polymerase [EC:2.7.7.19] D Daro_0645 NUDIX hydrolase K08311 nudH; putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-] D Daro_3096 Protein of unknown function 1935 K02553 rraA; regulator of ribonuclease activity A D Daro_0070 Uncharacterized P-loop ATPase protein UPF0042 K06958 rapZ; RNase adapter protein RapZ D Daro_3426 ATP-dependent helicase HrpA K03578 hrpA; ATP-dependent RNA helicase HrpA [EC:5.6.2.6] C 03041 Spliceosome C 03011 Ribosome [BR:dar03011] D Daro_1280 SSU ribosomal protein S1P K02945 RP-S1; small subunit ribosomal protein S1 D Daro_1742 SSU ribosomal protein S2P K02967 RP-S2; small subunit ribosomal protein S2 D Daro_0325 SSU ribosomal protein S3P K02982 RP-S3; small subunit ribosomal protein S3 D Daro_0344 SSU ribosomal protein S4P K02986 RP-S4; small subunit ribosomal protein S4 D Daro_0336 SSU ribosomal protein S5P K02988 RP-S5; small subunit ribosomal protein S5 D Daro_1216 SSU ribosomal protein S6P K02990 RP-S6; small subunit ribosomal protein S6 D Daro_0315 SSU ribosomal protein S7P K02992 RP-S7; small subunit ribosomal protein S7 D Daro_0333 SSU ribosomal protein S8P K02994 RP-S8; small subunit ribosomal protein S8 D Daro_0650 SSU ribosomal protein S9P K02996 RP-S9; small subunit ribosomal protein S9 D Daro_0318 SSU ribosomal protein S10P K02946 RP-S10; small subunit ribosomal protein S10 D Daro_0343 SSU ribosomal protein S11P K02948 RP-S11; small subunit ribosomal protein S11 D Daro_0314 SSU ribosomal protein S12P K02950 RP-S12; small subunit ribosomal protein S12 D Daro_0342 SSU ribosomal protein S13P K02952 RP-S13; small subunit ribosomal protein S13 D Daro_0332 SSU ribosomal protein S14P K02954 RP-S14; small subunit ribosomal protein S14 D Daro_2449 SSU ribosomal protein S15P K02956 RP-S15; small subunit ribosomal protein S15 D Daro_3066 SSU ribosomal protein S16P K02959 RP-S16; small subunit ribosomal protein S16 D Daro_0328 SSU ribosomal protein S17P K02961 RP-S17; small subunit ribosomal protein S17 D Daro_1218 SSU ribosomal protein S18P K02963 RP-S18; small subunit ribosomal protein S18 D Daro_0323 SSU ribosomal protein S19P K02965 RP-S19; small subunit ribosomal protein S19 D Daro_3035 SSU ribosomal protein S20P K02968 RP-S20; small subunit ribosomal protein S20 D Daro_0529 SSU ribosomal protein S21P K02970 RP-S21; small subunit ribosomal protein S21 D Daro_0309 LSU ribosomal protein L1P K02863 RP-L1; large subunit ribosomal protein L1 D Daro_0322 LSU ribosomal protein L2P K02886 RP-L2; large subunit ribosomal protein L2 D Daro_0319 LSU ribosomal protein L3P K02906 RP-L3; large subunit ribosomal protein L3 D Daro_0320 LSU ribosomal protein L4P K02926 RP-L4; large subunit ribosomal protein L4 D Daro_0331 LSU ribosomal protein L5P K02931 RP-L5; large subunit ribosomal protein L5 D Daro_0334 LSU ribosomal protein L6P K02933 RP-L6; large subunit ribosomal protein L6 D Daro_1219 LSU ribosomal protein L9P K02939 RP-L9; large subunit ribosomal protein L9 D Daro_0310 LSU ribosomal protein L10P K02864 RP-L10; large subunit ribosomal protein L10 D Daro_0308 LSU ribosomal protein L11P K02867 RP-L11; large subunit ribosomal protein L11 D Daro_0311 LSU ribosomal protein L12P K02935 RP-L7; large subunit ribosomal protein L7/L12 D Daro_0649 LSU ribosomal protein L13P K02871 RP-L13; large subunit ribosomal protein L13 D Daro_0329 LSU ribosomal protein L14P K02874 RP-L14; large subunit ribosomal protein L14 D Daro_0338 LSU ribosomal protein L15P K02876 RP-L15; large subunit ribosomal protein L15 D Daro_0326 LSU ribosomal protein L16P K02878 RP-L16; large subunit ribosomal protein L16 D Daro_0346 LSU ribosomal protein L17P K02879 RP-L17; large subunit ribosomal protein L17 D Daro_0335 LSU ribosomal protein L18P K02881 RP-L18; large subunit ribosomal protein L18 D Daro_3063 LSU ribosomal protein L19P K02884 RP-L19; large subunit ribosomal protein L19 D Daro_2674 LSU ribosomal protein L20P K02887 RP-L20; large subunit ribosomal protein L20 D Daro_3470 LSU ribosomal protein L21P K02888 RP-L21; large subunit ribosomal protein L21 D Daro_0324 LSU ribosomal protein L22P K02890 RP-L22; large subunit ribosomal protein L22 D Daro_0321 LSU ribosomal protein L23P K02892 RP-L23; large subunit ribosomal protein L23 D Daro_0330 LSU ribosomal protein L24P K02895 RP-L24; large subunit ribosomal protein L24 D Daro_3471 LSU ribosomal protein L27P K02899 RP-L27; large subunit ribosomal protein L27 D Daro_3143 LSU ribosomal protein L28P K02902 RP-L28; large subunit ribosomal protein L28 D Daro_0327 LSU ribosomal protein L29P K02904 RP-L29; large subunit ribosomal protein L29 D Daro_0337 LSU ribosomal protein L30P K02907 RP-L30; large subunit ribosomal protein L30 D Daro_2999 LSU ribosomal protein L31P K02909 RP-L31; large subunit ribosomal protein L31 D Daro_2013 LSU ribosomal protein L32P K02911 RP-L32; large subunit ribosomal protein L32 D Daro_3144 LSU ribosomal protein L33P K02913 RP-L33; large subunit ribosomal protein L33 D Daro_4204 LSU ribosomal protein L34P K02914 RP-L34; large subunit ribosomal protein L34 D Daro_2675 LSU ribosomal protein L35P K02916 RP-L35; large subunit ribosomal protein L35 D Daro_0341 LSU ribosomal protein L36P K02919 RP-L36; large subunit ribosomal protein L36 D Daro_3731 LSU ribosomal protein L25P K02897 RP-L25; large subunit ribosomal protein L25 D Daro_R0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0043 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0027 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0039 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0042 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA C 03009 Ribosome biogenesis [BR:dar03009] D Daro_2029 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Daro_1866 Protein of unknown function RIO1 K07178 RIOK1; RIO kinase 1 [EC:2.7.11.1] D Daro_3001 Exonuclease K13288 orn; oligoribonuclease [EC:3.1.-.-] D Daro_2030 Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era K03595 era; GTPase D Daro_3472 Small GTP-binding protein domain K03979 obgE; GTPase [EC:3.6.5.-] D Daro_2447 transcriptional regulator, TraR/DksA family K06204 dksA; RNA polymerase-binding transcription factor D Daro_2453 NusA antitermination factor K02600 nusA; transcription termination/antitermination protein NusA D Daro_3739 NusB antitermination factor K03625 nusB; transcription antitermination protein NusB D Daro_0307 transcription antitermination protein nusG K02601 nusG; transcription termination/antitermination protein NusG D Daro_0016 ribosomal small subunit pseudouridine synthase A K06183 rsuA; 16S rRNA pseudouridine516 synthase [EC:5.4.99.19] D Daro_3656 dimethyladenosine transferase K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] D Daro_3159 Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Daro_0028 Fmu, rRNA SAM-dependent methyltransferase K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] D Daro_3722 Conserved hypothetical protein 95 K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171] D Daro_3586 16S rRNA m(3)U-1498 methyltransferase K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] D Daro_4104 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Daro_3506 methyltransferase K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199] D Daro_2010 Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Daro_0504 Protein of unknown function UPF0011 K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] D Daro_0432 Protein of unknown function DUF548 K15984 rsmJ; 16S rRNA (guanine1516-N2)-methyltransferase [EC:2.1.1.242] D Daro_0184 Hemolysin A K06442 tlyA; 23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227] D Daro_3178 23S rRNA m(1)G-745 methyltransferase K00563 rlmA1; 23S rRNA (guanine745-N1)-methyltransferase [EC:2.1.1.187] D Daro_2969 23S rRNA Gm-2251 2'-O-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] D Daro_0943 23S rRNA Um-2552 2'-O-methyltransferase K02427 rlmE; 23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166] D Daro_2875 23S rRNA m(6)A-1618 methyltransferase K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181] D Daro_0171 Protein of unknown function DUF163 K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] D Daro_0196 SAM-dependent methyltransferase / 23S rRNA m(5)C-1962 methyltransferase K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191] D Daro_2736 Protein of unknown function DUF519 K07115 rlmJ; 23S rRNA (adenine2030-N6)-methyltransferase [EC:2.1.1.266] D Daro_0282 Putative RNA methylase:THUMP K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173] D Daro_2988 23S rRNA m(2)A-2503 methyltransferase K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Daro_1157 Radical SAM K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192] D Daro_0851 23S rRNA m(5)U-1939 methyltransferase K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190] D Daro_4154 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Daro_2455 ribosomal large subunit pseudouridine synthase B K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] D Daro_2006 ribosomal large subunit pseudouridine synthase C K06179 rluC; 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] D Daro_1604 ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] D Daro_3254 ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20] D Daro_3468 Pseudouridine synthase, Rsu K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21] D Daro_1982 [SSU ribosomal protein S18P]-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266] D Daro_3065 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM D Daro_2751 SSU ribosomal protein S12P methylthiotransferase K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4] D Daro_3214 Protein of unknown function DUF181 K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D Daro_2932 Protein of unknown function DUF181 K09136 ycaO; ribosomal protein S12 methylthiotransferase accessory factor D Daro_3937 [LSU ribosomal protein L11P]-lysine N-methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-] D Daro_1723 [LSU ribosomal protein L3P]-glutamine N5-methyltransferase K07320 prmB; ribosomal protein L3 glutamine methyltransferase [EC:2.1.1.298] D Daro_2005 RNAse E K08300 rne; ribonuclease E [EC:3.1.26.12] D Daro_0180 RNAse G K08301 rng; ribonuclease G [EC:3.1.26.-] D Daro_3892 Holliday junction resolvase YqgF K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-] D Daro_1129 ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6] D Daro_1118 ATP-dependent RNA helicase CsdA K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7] D Daro_3004 GTPase EngC K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100] D Daro_2981 Small GTP-binding protein protein domain:GTP-binding protein K03977 engA; GTPase D Daro_1785 GTP-binding protein K14540 rbgA; ribosome biogenesis GTPase A D Daro_2720 GTP-binding protein HflX K03665 hflX; GTPase D Daro_2979 GTP-binding protein HflX K03665 hflX; GTPase D Daro_0452 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Daro_3843 RelA/SpoT protein K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2] D Daro_2451 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A D Daro_2454 Protein of unknown function DUF150 K09748 rimP; ribosome maturation factor RimP D Daro_0676 RNA-binding S4 K14761 rlbA; ribosome-associated protein D Daro_0170 Iojap-related protein K09710 ybeB; ribosome-associated protein D Daro_3529 Protein of unknown function UPF0054 K07042 ybeY; probable rRNA maturation factor D Daro_0942 Protein of unknown function UPF0044 K07574 yhbY; RNA-binding protein D Daro_0596 Protein of unknown function DUF615 K09889 yjgA; ribosome-associated protein D Daro_4148 SSU ribosomal protein S30P / sigma 54 modulation protein K05808 hpf; ribosome hibernation promoting factor D Daro_3733 Conserved hypothetical protein 92 K06942 ychF; ribosome-binding ATPase D Daro_2012 Protein of unknown function DUF177 K07040 yceD; DUF177 domain-containing protein C 03016 Transfer RNA biogenesis [BR:dar03016] D Daro_0633 Guanine-specific ribonuclease N1 and T1 K01167 rnaSA; ribonuclease T1 [EC:4.6.1.24] D Daro_4135 metal dependent phosphohydrolase K00974 cca; tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-] D Daro_1873 Protein of unknown function UPF0027 K14415 RTCB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] D Daro_1321 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Daro_0644 Prolyl-tRNA synthetase, bacterial K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15] D Daro_3046 Isoleucyl-tRNA synthetase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5] D Daro_0544 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Daro_0574 methionyl-tRNA synthetase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10] D Daro_3447 glutaminyl-tRNA synthetase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18] D Daro_3866 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Daro_2848 Lysyl-tRNA synthetase, class-2 K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6] D Daro_0634 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Daro_3303 alanyl-tRNA synthetase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7] D Daro_2677 threonyl-tRNA synthetase / Ser-tRNA(Thr) hydrolase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3] D Daro_1300 seryl-tRNA synthetase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11] D Daro_0919 cysteinyl-tRNA synthetase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16] D Daro_3085 valyl-tRNA synthetase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9] D Daro_2984 histidyl-tRNA synthetase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21] D Daro_2673 phenylalanyl-tRNA synthetase, alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] D Daro_2672 phenylalanyl-tRNA synthetase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] D Daro_3175 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Daro_2459 tryptophanyl-tRNA synthetase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2] D Daro_0005 D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96] D Daro_0004 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Daro_3376 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Daro_3860 tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Daro_2885 Putative methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33] D Daro_0868 tRNA pseudouridine synthase K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12] D Daro_2450 tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25] D Daro_1515 Aminotransferase, class V:Aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1950 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1949 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_0452 translation factor SUA5 K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87] D Daro_3171 tRNA isopentenyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75] D Daro_4200 tRNA modification GTPase trmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-] D Daro_4103 Glucose-inhibited division protein A subfamily K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Daro_1054 selenophosphate synthase K01008 selD; selenide, water dikinase [EC:2.7.9.3] D Daro_4203 ribonuclease P protein component K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5] D Daro_R0016 RNA component of RNaseP K01978 rnpB; M1 RNA D Daro_3851 RNAse PH K00989 rph; ribonuclease PH [EC:2.7.7.56] D Daro_3909 Ribonuclease II K01147 rnb; exoribonuclease II [EC:3.1.13.1] D Daro_1975 2',5' RNA ligase K01975 thpR; RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58] D Daro_1799 ABC transporter related protein K06020 ettA; energy-dependent translational throttle protein EttA D Daro_3534 glycyl-tRNA synthetase alpha chain K01878 glyQ; glycyl-tRNA synthetase alpha chain [EC:6.1.1.14] D Daro_3535 glycyl-tRNA synthetase beta chain K01879 glyS; glycyl-tRNA synthetase beta chain [EC:6.1.1.14] D Daro_3769 Glutamyl-tRNA synthetase, class Ic K01894 gluQ; glutamyl-Q tRNA(Asp) synthetase [EC:6.1.1.-] D Daro_2202 tRNA-adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33] D Daro_3665 tRNA-U20-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-] D Daro_2886 tRNA-U20a,U20b-dihydrouridine synthase K05541 dusC; tRNA-dihydrouridine synthase C [EC:1.-.-.-] D Daro_3527 tRNA-i(6)A37 thiotransferase enzyme MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3] D Daro_1682 RNA methyltransferase TrmH, group 1 K02533 lasT; tRNA/rRNA methyltransferase [EC:2.1.1.-] D Daro_1823 tRNA (uracil-5-)-methyltransferase K00557 trmA; tRNA (uracil-5-)-methyltransferase [EC:2.1.1.35] D Daro_3064 tRNA (Guanine37-N(1)-) methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228] D Daro_0616 RNA methyltransferase TrmH, group 2 K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207] D Daro_1757 tRNA/rRNA methyltransferase (SpoU) K03437 spoU; RNA methyltransferase, TrmH family D Daro_2869 tRNA pseudouridine synthase C K06175 truC; tRNA pseudouridine65 synthase [EC:5.4.99.26] D Daro_4154 ribosomal large subunit pseudouridine synthase A K06177 rluA; tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] D Daro_3291 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13] D Daro_4143 PP-loop K14058 ttcA; tRNA 2-thiocytidine biosynthesis protein TtcA D Daro_3088 SirA-like protein K04085 tusA; tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-] D Daro_1952 HesB/YadR/YfhF:Iron-sulfur cluster assembly protein IscA K13628 iscA; iron-sulfur cluster assembly protein D Daro_1513 HesB/YadR/YfhF K13628 iscA; iron-sulfur cluster assembly protein D Daro_2199 Glycine cleavage T protein (aminomethyl transferase) K06980 ygfZ; tRNA-modifying protein YgfZ D Daro_2850 FAD dependent oxidoreductase:Protein of unknown function DUF752 K15461 mnmC; tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:2.1.1.61 1.5.-.-] D Daro_3277 Queuosine biosynthesis protein K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17] D Daro_4042 preQ(0) biosynthesis protein QueC K06920 queC; 7-cyano-7-deazaguanine synthase [EC:6.3.4.20] D Daro_0854 6-pyruvoyl tetrahydropterin synthase and hypothetical protein K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50] D Daro_4050 Radical SAM K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3] D Daro_2346 GTP cyclohydrolase I K06879 queF; 7-cyano-7-deazaguanine reductase [EC:1.7.1.13] D Daro_3051 4Fe-4S cluster binding protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Daro_0422 hypothetical protein K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6] D Daro_2715 Rhodanese-like protein K06917 selU; tRNA 2-selenouridine synthase [EC:2.9.1.3] D Daro_3278 tRNA-guanine transglycosylase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29] D Daro_0845 PP-loop K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19] D Daro_1981 Peptidase M22, glycoprotease K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB D Daro_0530 O-sialoglycoprotein endopeptidase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234] D Daro_3050 Protein of unknown function UPF0079 K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE D Daro_0656 UBA/THIF-type NAD/FAD binding fold protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Daro_2396 UBA/THIF-type NAD/FAD binding fold protein K22132 tcdA; tRNA threonylcarbamoyladenosine dehydratase D Daro_2972 RNAse R K12573 rnr; ribonuclease R [EC:3.1.13.1] D Daro_2448 3' exoribonuclease:RNA binding S1:KH, type 1 K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] C 03012 Translation factors [BR:dar03012] D Daro_2452 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Daro_2676 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Daro_0061 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Daro_3856 ABC transporter related protein K06158 ABCF3; ATP-binding cassette, subfamily F, member 3 D Daro_1743 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Daro_0317 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Daro_0305 Translation elongation factor Tu:Small GTP-binding protein domain K02358 tuf; elongation factor Tu D Daro_0316 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Daro_0222 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Daro_1810 selenocysteine-specific translation elongation factor SelB K03833 selB; selenocysteine-specific elongation factor D Daro_3687 bacterial peptide chain release factor 1 (bRF-1) K02835 prfA; peptide chain release factor 1 D Daro_1745 ribosome recycling factor K02838 frr; ribosome recycling factor D Daro_3684 [protein release factor]-glutamine N5-methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297] D Daro_3732 peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] D Daro_0340 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Daro_0509 bacterial translation initiation factor 1 (bIF-1) K02518 infA; translation initiation factor IF-1 D Daro_2035 translation elongation factor P (EF-P) K02356 efp; elongation factor P D Daro_2844 bacterial peptide chain release factor 2 (bRF-2) K02836 prfB; peptide chain release factor 2 D Daro_2730 bacterial peptide chain release factor 3 (bRF-3) K02837 prfC; peptide chain release factor 3 D Daro_0536 Class I peptide chain release factor K15034 yaeJ; ribosome-associated protein C 03110 Chaperones and folding catalysts [BR:dar03110] D Daro_3095 AAA ATPase, central region:Clp, N terminal K03694 clpA; ATP-dependent Clp protease ATP-binding subunit ClpA D Daro_2727 AAA ATPase, central region:Clp, N terminal K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB D Daro_1717 ClpX, ATPase regulatory subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Daro_0231 ClpX, ATPase regulatory subunit K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX D Daro_0204 Heat shock protein HslU K03667 hslU; ATP-dependent HslUV protease ATP-binding subunit HslU D Daro_1127 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein K04079 HSP90A; molecular chaperone HtpG D Daro_0923 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D Daro_1954 Fe-S protein assembly chaperone HscA K04044 hscA; molecular chaperone HscA D Daro_0426 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Daro_0922 Heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Daro_2467 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal K03686 dnaJ; molecular chaperone DnaJ D Daro_2065 Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal K05516 cbpA; curved DNA-binding protein D Daro_1953 Co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Daro_2748 Hsp33 protein K04083 hslO; molecular chaperone Hsp33 D Daro_0924 GrpE protein K03687 GRPE; molecular chaperone GrpE D Daro_0630 heat shock protein Hsp20 K13993 HSP20; HSP20 family protein D Daro_0206 heat shock protein Hsp15 K04762 hslR; ribosome-associated heat shock protein Hsp15 D Daro_0425 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Daro_2024 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Daro_1900 Peptidase S1C, Do K04771 degP; serine protease Do [EC:3.4.21.107] D Daro_0944 membrane protease FtsH catalytic subunit K03798 ftsH; cell division protease FtsH [EC:3.4.24.-] D Daro_4108 ATP synthase F0 subcomplex A subunit K02108 ATPF0A; F-type H+-transporting ATPase subunit a D Daro_0613 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Daro_1386 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy D Daro_3920 probable lipoprotein signal peptide K06006 cpxP; periplasmic protein CpxP/Spy D Daro_1578 Protein of unknown function DUF461 K09796 pccA; periplasmic copper chaperone A D Daro_3979 Hydrogenase expression/synthesis, HypA K04651 hypA; hydrogenase nickel incorporation protein HypA/HybF D Daro_3978 Hydrogenase accessory protein HypB K04652 hypB; hydrogenase nickel incorporation protein HypB D Daro_2581 hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Daro_2606 conserved hypothetical protein K23349 dmsD; putative dimethyl sulfoxide reductase chaperone D Daro_0915 Peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Daro_0916 Peptidyl-prolyl cis-trans isomerase, cyclophilin type K03768 PPIB; peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] D Daro_1933 PpiC-type peptidyl-prolyl cis-trans isomerase K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8] D Daro_0990 Peptidylprolyl isomerase, FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Daro_3469 Peptidylprolyl isomerase, FKBP-type K03772 fkpA; FKBP-type peptidyl-prolyl cis-trans isomerase FkpA [EC:5.2.1.8] D Daro_3044 Peptidylprolyl isomerase, FKBP-type K03774 slpA; FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8] D Daro_2349 Peptidylprolyl isomerase, FKBP-type K03775 slyD; FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] D Daro_2906 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Daro_1393 PpiC-type peptidyl-prolyl cis-trans isomerase K03769 ppiC; peptidyl-prolyl cis-trans isomerase C [EC:5.2.1.8] D Daro_3658 PpiC-type peptidyl-prolyl cis-trans isomerase K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] D Daro_2997 Thioredoxin K03671 TXN; thioredoxin D Daro_4190 putative thioredoxin K03671 TXN; thioredoxin D Daro_2279 hypothetical protein K03671 TXN; thioredoxin D Daro_3155 hypothetical protein K03671 TXN; thioredoxin D Daro_0928 Thioredoxin K03672 trxC; thioredoxin 2 [EC:1.8.1.8] D Daro_2376 Thioredoxin-related protein K05838 ybbN; putative thioredoxin D Daro_0612 Glutaredoxin, GrxC K03676 grxC; glutaredoxin 3 D Daro_3683 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin D Daro_3864 Twin-arginine translocation pathway signal K03673 dsbA; protein dithiol oxidoreductase (disulfide-forming) [EC:1.8.4.15] D Daro_3145 disulfide bond formation protein DsbB K03611 dsbB; protein dithiol:quinone oxidoreductase [EC:1.8.5.9] D Daro_2318 periplasmic thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Daro_3509 putative thiol:disulfide interchange protein (periplasmic) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Daro_2651 periplasmic thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Daro_4167 Cytochrome c biogenesis protein, transmembrane region K04084 dsbD; thioredoxin:protein disulfide reductase [EC:1.8.4.16] D Daro_3997 Periplasmic protein thiol:disulfide oxidoreductase DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE C 04131 Membrane trafficking [BR:dar04131] D Daro_0392 Phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D Daro_0396 Phospholipase D/Transphosphatidylase K01115 PLD1_2; phospholipase D1/2 [EC:3.1.4.4] D Daro_2989 nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6] D Daro_0933 Protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Daro_2248 Protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Daro_2637 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Daro_3592 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Daro_3625 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Daro_2117 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Daro_3595 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Daro_1127 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein K04079 HSP90A; molecular chaperone HtpG C 04121 Ubiquitin system [BR:dar04121] C 03051 Proteasome [BR:dar03051] D Daro_1127 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein K04079 HSP90A; molecular chaperone HtpG C 03032 DNA replication proteins [BR:dar03032] D Daro_1593 RNase HI K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Daro_1384 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Daro_3677 Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4] D Daro_3525 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Daro_1715 Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Daro_3512 Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Daro_2671 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Daro_1327 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Daro_1281 Integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Daro_1659 Histone-like bacterial DNA-binding protein K05788 ihfB; integration host factor subunit beta D Daro_2563 Histone-like bacterial DNA-binding protein K05788 ihfB; integration host factor subunit beta D Daro_1648 Histone-like bacterial DNA-binding protein K05788 ihfB; integration host factor subunit beta D Daro_0001 chromosomal replication initiator protein, DnaA K02313 dnaA; chromosomal replication initiator protein D Daro_1220 primary replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3] D Daro_0527 DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101] D Daro_0483 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Daro_0559 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Daro_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Daro_3083 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Daro_0542 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Daro_2196 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Daro_1381 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1592 DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1907 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1636 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1633 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_0806 AAA ATPase, central region K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Daro_1756 RNase HII K03470 rnhB; ribonuclease HII [EC:3.1.26.4] D Daro_0163 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7] D Daro_1734 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Daro_3180 regulatory inactivation of DnaA Hda protein K10763 hda; DnaA-homolog protein D Daro_1230 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Daro_0003 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Daro_1850 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Daro_1867 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Daro_0018 DNA topoisomerase III K03169 topB; DNA topoisomerase III [EC:5.6.2.1] C 03036 Chromosome and associated proteins [BR:dar03036] D Daro_0785 TPR repeat K09667 OGT; protein O-GlcNAc transferase [EC:2.4.1.255] D Daro_3525 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Daro_2029 RNAse III K03685 rnc; ribonuclease III [EC:3.1.26.3] D Daro_2525 Histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS D Daro_1715 Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Daro_3512 Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Daro_2671 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Daro_1327 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Daro_1281 Integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Daro_1659 Histone-like bacterial DNA-binding protein K05788 ihfB; integration host factor subunit beta D Daro_2563 Histone-like bacterial DNA-binding protein K05788 ihfB; integration host factor subunit beta D Daro_1648 Histone-like bacterial DNA-binding protein K05788 ihfB; integration host factor subunit beta D Daro_2065 Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal K05516 cbpA; curved DNA-binding protein D Daro_2064 transcriptional regulator, MerR family K18997 cbpM; chaperone modulatory protein CbpM D Daro_0001 chromosomal replication initiator protein, DnaA K02313 dnaA; chromosomal replication initiator protein D Daro_0599 Ferritin and Dps K04047 dps; starvation-inducible DNA-binding protein D Daro_3666 Helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Daro_2980 RNA-binding protein Hfq K03666 hfq; host factor-I protein D Daro_0512 transcriptional regulator, AsnC family K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein D Daro_1732 Chromosome segregation protein SMC K03529 smc; chromosome segregation protein D Daro_2457 condensin subunit ScpA K05896 scpA; segregation and condensation protein A D Daro_2456 condensin subunit ScpB K06024 scpB; segregation and condensation protein B D Daro_3494 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Daro_2363 cell division protein FtsB K05589 ftsB; cell division protein FtsB D Daro_3717 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Daro_3504 peptidoglycan synthetase FtsI K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4] D Daro_1295 DNA translocase FtsK K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family D Daro_3505 Cell division protein, FtsL -like protein K03586 ftsL; cell division protein FtsL D Daro_3495 cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ D Daro_3499 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D Daro_3716 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Daro_3493 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Daro_4027 cell division protein ZapA K09888 zapA; cell division protein ZapA D Daro_4028 hypothetical protein K09892 zapB; cell division protein ZapB D Daro_3708 Protein of unknown function DUF1342 K18778 zapD; cell division protein ZapD D Daro_2856 AFG1-like ATPase K06916 zapE; cell division protein ZapE D Daro_3049 Cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Daro_0043 Cell wall hydrolase/autolysin K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] D Daro_2160 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Daro_0275 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Daro_0276 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Daro_0277 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Daro_0627 cell division inhibitor SlmA K05501 slmA; TetR/AcrR family transcriptional regulator D Daro_0116 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Daro_0115 rod shape-determining protein MreC K03570 mreC; rod shape-determining protein MreC D Daro_0114 rod shape-determining protein MreD K03571 mreD; rod shape-determining protein MreD D Daro_0112 cell elongation-specific peptidoglycan biosynthesis regulator RodA K05837 rodA; rod shape determining protein RodA D Daro_4105 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Daro_0805 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Daro_0550 putative partition-related protein K03496 parA; chromosome partitioning protein D Daro_4106 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_2219 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_2542 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_3014 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_1850 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Daro_1867 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Daro_4103 Glucose-inhibited division protein A subfamily K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme D Daro_4104 16S rRNA m(7)G-527 methyltransferase K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170] D Daro_0194 tyrosine recombinase XerC subunit K03733 xerC; integrase/recombinase XerC D Daro_0537 tyrosine recombinase XerD subunit K04763 xerD; integrase/recombinase XerD D Daro_0576 Protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning D Daro_3955 Filamentation induced by cAMP protein Fic K04095 fic; cell filamentation protein, protein adenylyltransferase [EC:2.7.7.108] D Daro_0625 cell division checkpoint GTPase YihA K03978 engB; GTP-binding protein C 03400 DNA repair and recombination proteins [BR:dar03400] D Daro_0538 Methylated-DNA-(protein)-cysteine S-methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] D Daro_3894 deoxyribodipyrimidine photo-lyase type I K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3] D Daro_0064 A/G-specific DNA-adenine glycosylase K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31] D Daro_1155 DNA-(apurinic or apyrimidinic site) lyase K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18] D Daro_3706 NUDIX hydrolase:Thiamine monophosphate synthase K03574 mutT; 8-oxo-dGTP diphosphatase [EC:3.6.1.55] D Daro_3140 deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23] D Daro_1983 Phage SPO1 DNA polymerase-related protein K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Daro_2037 Uracil-DNA glycosylase superfamily K21929 udg; uracil-DNA glycosylase [EC:3.2.2.27] D Daro_0843 DNA-3-methyladenine glycosylase II K01247 alkA; DNA-3-methyladenine glycosylase II [EC:3.2.2.21] D Daro_1887 DNA-3-methyladenine glycosylase I K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20] D Daro_3726 DNA-(apurinic or apyrimidinic site) lyase K10563 mutM; formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] D Daro_0123 AP endonuclease, family 1:Exodeoxyribonuclease III xth K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Daro_3648 Exodeoxyribonuclease III K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2] D Daro_2838 exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-] D Daro_1734 NAD-dependent DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2] D Daro_0163 DNA polymerase A K02335 polA; DNA polymerase I [EC:2.7.7.7] D Daro_0473 Excinuclease ABC subunit A K03701 uvrA; excinuclease ABC subunit A D Daro_2003 Excinuclease ABC subunit B K03702 uvrB; excinuclease ABC subunit B D Daro_2038 Excinuclease ABC subunit C K03703 uvrC; excinuclease ABC subunit C D Daro_0546 ATP-dependent DNA helicase UvrD K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4] D Daro_0312 DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6] D Daro_0313 DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] D Daro_0345 DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] D Daro_3844 DNA-directed RNA polymerase subunit omega K03060 rpoZ; DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] D Daro_1965 transcription-repair coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4] D Daro_2347 DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS D Daro_3164 DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL D Daro_3211 Exodeoxyribonuclease VII large subunit K03601 xseA; exodeoxyribonuclease VII large subunit [EC:3.1.11.6] D Daro_3059 Exodeoxyribonuclease VII small subunit K03602 xseB; exodeoxyribonuclease VII small subunit [EC:3.1.11.6] D Daro_0559 DNA polymerase III, alpha subunit K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7] D Daro_0002 DNA polymerase III, beta subunit K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7] D Daro_3083 DNA polymerase III chi subunit, HolC K02339 holC; DNA polymerase III subunit chi [EC:2.7.7.7] D Daro_0542 DNA polymerase III, delta subunit K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7] D Daro_2196 DNA polymerase III, delta prime subunit K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7] D Daro_1381 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1592 DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1907 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1636 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_1633 DNA polymerase III, epsilon subunit K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7] D Daro_0806 AAA ATPase, central region K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7] D Daro_0483 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Daro_4152 RecA bacterial DNA recombination protein K03553 recA; recombination protein RecA D Daro_4062 Holliday junction DNA helicase subunit RuvA K03550 ruvA; holliday junction DNA helicase RuvA D Daro_4060 Holliday junction DNA helicase subunit RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4] D Daro_4063 Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10] D Daro_0033 replication restart DNA helicase PriA K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4] D Daro_1217 primosomal replication protein N K02686 priB; primosomal replication protein N D Daro_1919 SMC protein, N-terminal K03546 sbcC; DNA repair protein SbcC/Rad50 D Daro_2237 putative ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50 D Daro_2558 putative ATPase involved in DNA repair K03546 sbcC; DNA repair protein SbcC/Rad50 D Daro_1920 Exodeoxyribonuclease I subunit D K03547 sbcD; DNA repair protein SbcD/Mre11 D Daro_2561 DNA repair exonuclease-like protein K03547 sbcD; DNA repair protein SbcD/Mre11 D Daro_2238 DNA repair exonuclease-like protein K03547 sbcD; DNA repair protein SbcD/Mre11 D Daro_1987 DNA repair protein RadA K04485 radA; DNA repair protein RadA/Sms D Daro_0356 ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4] D Daro_2031 DNA replication and repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O) D Daro_0808 RecR protein K06187 recR; recombination protein RecR D Daro_0932 DNA replication and repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N) D Daro_3858 Putative exonuclease, RdgC K03554 rdgC; recombination associated protein RdgC D Daro_4068 Protein of unknown function DUF853, NPT hydrolase putative K06915 herA; DNA double-strand break repair helicase HerA and related ATPase D Daro_1230 DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2] D Daro_0003 DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2] D Daro_1715 Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Daro_3512 Histone-like bacterial DNA-binding protein K03530 hupB; DNA-binding protein HU-beta D Daro_3666 Helix-turn-helix, Fis-type K03557 fis; Fis family transcriptional regulator, factor for inversion stimulation protein D Daro_2671 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Daro_1327 Integration host factor, alpha subunit K04764 ihfA; integration host factor subunit alpha D Daro_1281 Integration host factor, beta subunit K05788 ihfB; integration host factor subunit beta D Daro_1659 Histone-like bacterial DNA-binding protein K05788 ihfB; integration host factor subunit beta D Daro_2563 Histone-like bacterial DNA-binding protein K05788 ihfB; integration host factor subunit beta D Daro_1648 Histone-like bacterial DNA-binding protein K05788 ihfB; integration host factor subunit beta D Daro_0913 ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4] D Daro_2525 Histone-like nucleoid-structuring protein H-NS K03746 hns; DNA-binding protein H-NS D Daro_2123 UMUC-like DNA-repair protein K02346 dinB; DNA polymerase IV [EC:2.7.7.7] D Daro_1939 SOS-response transcriptional repressor, LexA K01356 lexA; repressor LexA [EC:3.4.21.88] D Daro_1940 SOS cell division inhibitor SulA K14160 imuA; protein ImuA D Daro_1941 conserved hypothetical protein K14161 imuB; protein ImuB D Daro_1942 error-prone DNA polymerase, DnaE-like protein K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7] D Daro_4151 Regulatory protein RecX K03565 recX; regulatory protein D Daro_3879 ATP-dependent DNA helicase Rep K03656 rep; ATP-dependent DNA helicase Rep [EC:5.6.2.4] D Daro_1779 Helicase c2:DEAD/DEAH box helicase, N-terminal K03722 dinG; ATP-dependent DNA helicase DinG [EC:5.6.2.3] D Daro_0964 Ribonucleotide reductase large subunit K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] C 03029 Mitochondrial biogenesis [BR:dar03029] D Daro_0810 Cytochrome b/b6, N-terminal:Cytochrome b/b6, C-terminal K00412 CYTB; ubiquinol-cytochrome c reductase cytochrome b subunit D Daro_2452 bacterial translation initiation factor 2 (bIF-2) K02519 infB; translation initiation factor IF-2 D Daro_2676 bacterial translation initiation factor 3 (bIF-3) K02520 infC; translation initiation factor IF-3 D Daro_1743 translation elongation factor Ts (EF-Ts) K02357 tsf; elongation factor Ts D Daro_0317 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Daro_0305 Translation elongation factor Tu:Small GTP-binding protein domain K02358 tuf; elongation factor Tu D Daro_0316 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Daro_0222 translation elongation factor 2 (EF-2/EF-G) K02355 fusA; elongation factor G D Daro_2030 Small GTP-binding protein domain:GTP-binding:GTP-binding protein Era K03595 era; GTPase D Daro_3175 tyrosyl-tRNA synthetase K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1] D Daro_0544 leucyl-tRNA synthetase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4] D Daro_0634 aspartyl-tRNA synthetase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12] D Daro_3866 arginyl-tRNA synthetase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19] D Daro_0118 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A K02433 gatA; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] D Daro_0120 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B K02434 gatB; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] D Daro_0117 aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C K02435 gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] D Daro_0483 single-strand binding protein K03111 ssb; single-strand DNA-binding protein D Daro_1750 surface antigen (D15):Surface antigen variable number K07277 SAM50; outer membrane protein insertion porin family D Daro_0923 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D Daro_0924 GrpE protein K03687 GRPE; molecular chaperone GrpE D Daro_0426 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Daro_0425 Chaperonin Cpn10 K04078 groES; chaperonin GroES D Daro_0922 Heat shock protein DnaJ K03686 dnaJ; molecular chaperone DnaJ D Daro_2467 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal K03686 dnaJ; molecular chaperone DnaJ D Daro_1515 Aminotransferase, class V:Aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1950 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1949 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1953 Co-chaperone Hsc20 K04082 hscB; molecular chaperone HscB D Daro_3683 Glutaredoxin-related protein K07390 grxD; monothiol glutaredoxin D Daro_0576 Protein of unknown function DUF59 K03593 mrp; ATP-binding protein involved in chromosome partitioning D Daro_1463 Protoheme IX farnesyltransferase K02257 COX10; heme o synthase [EC:2.5.1.141] D Daro_1468 Cytochrome c oxidase assembly protein CtaG/Cox11 K02258 COX11; cytochrome c oxidase assembly protein subunit 11 D Daro_1462 Cytochrome oxidase assembly K02259 COX15; heme a synthase [EC:1.17.99.9] D Daro_4201 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Daro_1465 Surfeit locus 1 K14998 SURF1; surfeit locus 1 family protein D Daro_1472 Electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D Daro_1577 Electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D Daro_0135 Electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D Daro_1844 Electron transport protein SCO1/SenC K07152 SCO1; protein SCO1 D Daro_1127 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein K04079 HSP90A; molecular chaperone HtpG B B 09183 Protein families: signaling and cellular processes C 02000 Transporters [BR:dar02000] D Daro_0154 Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6] D Daro_0348 ABC transporter, transmembrane region:ABC transporter related protein K24821 atm1; ATP-binding cassette, subfamily B, heavy metal transporter D Daro_3262 ABC transporter, transmembrane region:ABC transporter related protein K06147 ABCB-BAC; ATP-binding cassette, subfamily B, bacterial D Daro_3202 ABC transporter, transmembrane region:ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Daro_0045 ABC transporter related protein K02471 bacA; vitamin B12/bleomycin/antimicrobial peptide transport system ATP-binding/permease protein D Daro_0838 ABC transporter related protein K15738 uup; ABC transport system ATP-binding/permease protein D Daro_3693 Thiosulphate-binding protein K02048 cysP; sulfate/thiosulfate transport system substrate-binding protein D Daro_2134 Thiosulphate-binding protein K23163 sbp; sulfate/thiosulfate transport system substrate-binding protein D Daro_3692 Sulphate transport system permease protein 2:Sulfate ABC transporter, permease protein CysT K02046 cysU; sulfate/thiosulfate transport system permease protein D Daro_3691 Sulphate transport system permease protein 2:Sulfate ABC transporter, permease protein CysW K02047 cysW; sulfate/thiosulfate transport system permease protein D Daro_3690 Sulphate transport system permease protein 1 K02045 cysA; sulfate/thiosulfate transport system ATP-binding protein [EC:7.3.2.3] D Daro_1476 Molybdenum ABC transporter, periplasmic binding protein K02020 modA; molybdate transport system substrate-binding protein D Daro_2783 Molybdate ABC transporter, permease protein K02018 modB; molybdate transport system permease protein D Daro_2784 Molybdate ABC transporter, ATP-binding protein K02017 modC; molybdate transport system ATP-binding protein [EC:7.3.2.5] D Daro_0830 Twin-arginine translocation pathway signal K15576 nrtA; nitrate/nitrite transport system substrate-binding protein D Daro_0831 Nitrate transport permease K15577 nrtB; nitrate/nitrite transport system permease protein D Daro_0832 Nitrate transport ATP-binding subunits C and D K15578 nrtC; nitrate/nitrite transport system ATP-binding protein [EC:7.3.2.4] D Daro_1056 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Daro_1200 extracellular solute-binding protein, family 1 K02012 afuA; iron(III) transport system substrate-binding protein D Daro_1198 Binding-protein-dependent transport systems inner membrane component K02011 afuB; iron(III) transport system permease protein D Daro_1197 ABC transporter related protein K02010 afuC; iron(III) transport system ATP-binding protein [EC:7.2.2.7] D Daro_0081 ABC transport system substrate-binding protein K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Daro_2153 putative solute-binding periplasmic protein of ABC transport K02051 ABC.SN.S; NitT/TauT family transport system substrate-binding protein D Daro_0080 Binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Daro_2152 Binding-protein-dependent transport systems inner membrane component K02050 ABC.SN.P; NitT/TauT family transport system permease protein D Daro_0079 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Daro_2151 ABC transporter related protein K02049 ABC.SN.A; NitT/TauT family transport system ATP-binding protein D Daro_1208 Mammalian cell entry related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Daro_3400 Mammalian cell entry related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein D Daro_1206 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Daro_3401 Protein of unknown function DUF140 K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein D Daro_1207 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Daro_3402 ABC transporter related protein K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein D Daro_1209 putative lipoprotein K18480 linN; cholesterol transport system auxiliary component D Daro_3398 Toluene tolerance K07323 mlaC; phospholipid transport system substrate-binding protein D Daro_3397 NTP binding protein (contains STAS domain) K07122 mlaB; phospholipid transport system transporter-binding protein D Daro_3306 carbohydrate ABC transporter substrate-binding protein, CUT1 family K02027 ABC.MS.S; multiple sugar transport system substrate-binding protein D Daro_2488 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Daro_3562 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Daro_4070 phosphate ABC transporter substrate-binding protein, PhoT family K02040 pstS; phosphate transport system substrate-binding protein D Daro_3563 phosphate ABC transporter membrane protein 1, PhoT family K02037 pstC; phosphate transport system permease protein D Daro_3564 phosphate ABC transporter membrane protein 2, PhoT family K02038 pstA; phosphate transport system permease protein D Daro_3565 phosphate ABC transporter ATP-binding protein, PhoT family K02036 pstB; phosphate transport system ATP-binding protein [EC:7.3.2.1] D Daro_1826 Phosphonate-binding periplasmic protein K02044 phnD; phosphonate transport system substrate-binding protein D Daro_1824 Phosphonate uptake transporter K02042 phnE; phosphonate transport system permease protein D Daro_1825 ABC transporter related protein K02041 phnC; phosphonate transport system ATP-binding protein [EC:7.3.2.2] D Daro_2357 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_4096 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_4097 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_4043 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0270 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2772 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0253 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0376 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2947 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0524 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2712 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0900 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_0904 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_3241 amino acid/amide ABC transporter substrate-binding protein, HAAT family K01999 livK; branched-chain amino acid transport system substrate-binding protein D Daro_2359 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_2771 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_0367 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_4044 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_0271 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_3236 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_0251 amino acid/amide ABC transporter membrane protein 1, HAAT family K01997 livH; branched-chain amino acid transport system permease protein D Daro_4098 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0908 amino acid/amide ABC transporter membrane protein 2, HAAT family / amino acid/amide ABC transporter membrane protein 1, HAAT family / amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_4045 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_2770 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_0252 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_0366 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_3235 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family / amino acid/amide ABC transporter membrane protein 2, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0272 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_2358 amino acid/amide ABC transporter membrane protein 2, HAAT family K01998 livM; branched-chain amino acid transport system permease protein D Daro_2360 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_4046 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0365 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0250 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_0273 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_2769 amino acid/amide ABC transporter ATP-binding protein 1, HAAT family K01995 livG; branched-chain amino acid transport system ATP-binding protein D Daro_4047 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0254 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0364 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0274 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_0909 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_2356 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_2768 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_3234 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_4099 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K01996 livF; branched-chain amino acid transport system ATP-binding protein D Daro_1443 amino acid/amide ABC transporter substrate-binding protein, HAAT family K11959 urtA; urea transport system substrate-binding protein D Daro_1437 amino acid/amide ABC transporter membrane protein 1, HAAT family K11960 urtB; urea transport system permease protein D Daro_1436 amino acid/amide ABC transporter membrane protein 2, HAAT family K11961 urtC; urea transport system permease protein D Daro_1435 ABC transporter related protein K11962 urtD; urea transport system ATP-binding protein D Daro_1434 amino acid/amide ABC transporter ATP-binding protein 2, HAAT family K11963 urtE; urea transport system ATP-binding protein D Daro_0469 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Daro_3976 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Daro_1002 amino acid ABC transporter substrate-binding protein, PAAT family K02030 ABC.PA.S; polar amino acid transport system substrate-binding protein D Daro_1224 extracellular solute-binding protein, family 5 K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein D Daro_1317 Binding-protein-dependent transport systems inner membrane component K02033 ABC.PE.P; peptide/nickel transport system permease protein D Daro_1318 Binding-protein-dependent transport systems inner membrane component K02034 ABC.PE.P1; peptide/nickel transport system permease protein D Daro_1319 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal K02031 ddpD; peptide/nickel transport system ATP-binding protein D Daro_0138 Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Daro_0137 Periplasmic binding protein K02016 ABC.FEV.S; iron complex transport system substrate-binding protein D Daro_4031 transport system permease protein K02015 ABC.FEV.P; iron complex transport system permease protein D Daro_4032 ABC transporter related protein K02013 ABC.FEV.A; iron complex transport system ATP-binding protein [EC:7.2.2.-] D Daro_1696 Cobalt transport protein CbiN K02009 cbiN; cobalt/nickel transport protein D Daro_1695 Cobalt transport protein K02008 cbiQ; cobalt/nickel transport system permease protein D Daro_1697 Cobalamin (vitamin B12) biosynthesis CbiM protein K02007 cbiM; cobalt/nickel transport system permease protein D Daro_1694 Cobalt transport protein ATP-binding subunit K02006 cbiO; cobalt/nickel transport system ATP-binding protein D Daro_0199 Periplasmic solute binding protein K02077 ABC.ZM.S; zinc/manganese transport system substrate-binding protein D Daro_0201 ABC-type Mn2+/Zn2+ transport systems permease components-like protein K02075 ABC.ZM.P; zinc/manganese transport system permease protein D Daro_0200 ABC transporter related protein K02074 ABC.ZM.A; zinc/manganese transport system ATP-binding protein D Daro_3081 permease YjgP/YjgQ K07091 lptF; lipopolysaccharide export system permease protein D Daro_3080 permease YjgP/YjgQ K11720 lptG; lipopolysaccharide export system permease protein D Daro_4150 ABC transporter related protein K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5] D Daro_4165 ABC-2 type transporter, NodJ K09694 nodJ; lipooligosaccharide transport system permease protein D Daro_4160 ABC transporter related protein K09695 nodI; lipooligosaccharide transport system ATP-binding protein D Daro_2836 Lipoprotein releasing system, transmembrane protein, LolC/E family K09808 lolC_E; lipoprotein-releasing system permease protein D Daro_2835 Lipoprotein releasing system, ATP-binding protein K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-] D Daro_3994 heme exporter protein D K02196 ccmD; heme exporter protein D D Daro_3993 Cytochrome c-type biogenesis protein CcmC K02195 ccmC; heme exporter protein C D Daro_3992 Cytochrome c-type biogenesis protein CcmB K02194 ccmB; heme exporter protein B D Daro_3991 Heme exporter protein CcmA K02193 ccmA; heme exporter protein A [EC:7.6.2.5] D Daro_3716 cell division protein FtsX K09811 ftsX; cell division transport system permease protein D Daro_3717 cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein D Daro_1562 putative ABC-2 type transport system permease protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Daro_2372 ABC-2 protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Daro_3395 ABC-2 protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Daro_0988 ABC-2 protein K01992 ABC-2.P; ABC-2 type transport system permease protein D Daro_2371 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Daro_3396 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Daro_1564 ABC transporter related protein K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein D Daro_1168 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Daro_1989 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Daro_2394 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Daro_2395 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Daro_3463 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Daro_3466 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Daro_1672 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Daro_3916 Protein of unknown function DUF214 K02004 ABC.CD.P; putative ABC transport system permease protein D Daro_1167 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Daro_2713 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Daro_1671 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Daro_1841 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Daro_3917 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Daro_3462 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Daro_2391 ABC transporter related protein K02003 ABC.CD.A; putative ABC transport system ATP-binding protein D Daro_3365 Multi antimicrobial extrusion protein MatE K26939 norM; MATE family, multidrug efflux pump D Daro_0860 Nucleoside:H+ symporter:Major facilitator superfamily MFS_1 K05820 hcaT; MFS transporter, PPP family, 3-phenylpropionic acid transporter D Daro_0825 Nitrate transporter K02575 NRT2; MFS transporter, NNP family, nitrate/nitrite transporter D Daro_1984 Major facilitator superfamily MFS_1 K08227 lplT; MFS transporter, LPLT family, lysophospholipid transporter D Daro_0128 Major facilitator superfamily MFS_1 K08218 ampG; MFS transporter, PAT family, beta-lactamase induction signal transducer AmpG D Daro_0049 Drug resistance transporter Bcr/CflA subfamily K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein D Daro_1885 Major facilitator superfamily MFS_1 K08223 fsr; MFS transporter, FSR family, fosmidomycin resistance protein D Daro_1096 Major facilitator superfamily MFS_1 K08224 ynfM; MFS transporter, YNFM family, putative membrane transport protein D Daro_4084 phosphoenolpyruvate--protein phosphotransferase K08483 ptsI; phosphoenolpyruvate-protein phosphotransferase (PTS system enzyme I) [EC:2.7.3.9] D Daro_4083 Phosphoryl transfer system, HPr K02784 ptsH; phosphocarrier protein HPr D Daro_4082 PTS system fructose subfamily IIA component K02793 manXa; mannose PTS system EIIA component [EC:2.7.1.191] D Daro_1083 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Daro_4147 PTS IIA-like nitrogen-regulatory protein PtsN K02806 ptsN; nitrogen PTS system EIIA component [EC:2.7.1.-] D Daro_3347 TrkA-N K10716 kch; voltage-gated potassium channel D Daro_0498 TrkA-N K10716 kch; voltage-gated potassium channel D Daro_0054 ammonium transporter K03320 amt; ammonium transporter, Amt family D Daro_3703 ammonium transporter K03320 amt; ammonium transporter, Amt family D Daro_3289 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Daro_1382 Glutathione S-transferase, N-terminal K00799 GST; glutathione S-transferase [EC:2.5.1.18] D Daro_0812 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal K03599 sspA; stringent starvation protein A D Daro_0852 Protein of unknown function UPF0005 K19416 yccA; modulator of FtsH protease D Daro_2100 Formate/nitrite transporter K06212 focA; formate transporter D Daro_0819 Formate/nitrite transporter K21993 fdhC; formate transporter D Daro_3333 Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel D Daro_2755 MscS Mechanosensitive ion channel:Conserved TM helix K03442 mscS; small conductance mechanosensitive channel D Daro_0722 chemotaxis motA protein K02556 motA; chemotaxis protein MotA D Daro_0744 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Daro_0723 OmpA/MotB K02557 motB; chemotaxis protein MotB D Daro_0745 OmpA/MotB K02557 motB; chemotaxis protein MotB D Daro_3210 MotA/TolQ/ExbB proton channel K03561 exbB; biopolymer transport protein ExbB D Daro_1115 outer membrane transport energization protein ExbB K03561 exbB; biopolymer transport protein ExbB D Daro_1114 outer membrane transport energization protein ExbD K03559 exbD; biopolymer transport protein ExbD D Daro_3209 Biopolymer transport protein ExbD/TolR K03559 exbD; biopolymer transport protein ExbD D Daro_4056 Cell division and transport-associated protein TolQ K03562 tolQ; biopolymer transport protein TolQ D Daro_4055 Cell division and transport-associated protein TolR K03560 tolR; biopolymer transport protein TolR D Daro_1081 Magnesium and cobalt transport protein CorA K03284 corA; magnesium transporter D Daro_3905 Mg2+ transporter protein, CorA-like protein K03284 corA; magnesium transporter D Daro_3446 camphor resistance protein CrcB K06199 crcB; fluoride exporter D Daro_2476 Protein of unknown function UPF0187 K08994 yneE; ion channel-forming bestrophin family protein D Daro_3436 Protein of unknown function DUF1211 K24915 TMEM175; TMEM175 potassium channel family protein D Daro_3215 CBS:Protein of unknown function DUF21:Transporter-associated region K03699 tlyC; magnesium and cobalt exporter, CNNM family D Daro_0640 CBS:Protein of unknown function DUF21:Transporter-associated region K03699 tlyC; magnesium and cobalt exporter, CNNM family D Daro_3545 OmpA-like transmembrane domain K16080 mnoP; high affinity Mn2+ porin D Daro_1228 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Daro_0464 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Daro_2186 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Daro_2645 OmpA/MotB K03286 TC.OOP; OmpA-OmpF porin, OOP family D Daro_3814 Membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Daro_1548 Membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Daro_1346 Membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Daro_0350 Membrane protein involved in aromatic hydrocarbon degradation K06076 fadL; long-chain fatty acid transport protein D Daro_1770 Lipolytic enzyme, G-D-S-L K12686 apeE; outer membrane lipase/esterase D Daro_1055 TonB-dependent siderophore receptor K16090 fiu; catecholate siderophore receptor D Daro_1834 TonB-dependent siderophore receptor K16088 TC.FEV.OM1; outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid D Daro_4088 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_1044 TonB-dependent receptor:TonB box, N-terminal K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_4029 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_4030 TonB-dependent receptor:Lipocalin K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_2785 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_0132 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_2952 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_2953 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_3157 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_4090 TonB-dependent receptor K02014 TC.FEV.OM; iron complex outermembrane recepter protein D Daro_2254 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Daro_2628 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Daro_1877 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Daro_1176 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Daro_0294 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Daro_2803 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Daro_2263 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Daro_2478 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Daro_2620 Outer membrane efflux protein K15725 czcC; outer membrane protein, heavy metal efflux system D Daro_3926 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Daro_1165 Outer membrane efflux protein K12340 tolC; outer membrane protein D Daro_0706 Type I secretion outer membrane protein, TolC K12543 lapE; outer membrane protein, adhesin transport system D Daro_3827 RND efflux system, outer membrane lipoprotein, NodT K18903 oprC; outer membrane protein, multidrug efflux system D Daro_2162 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system D Daro_3919 RND efflux system, outer membrane lipoprotein, NodT K18904 nodT; outer membrane protein, multidrug efflux system D Daro_2397 Polysaccharide export protein K01991 wza; polysaccharide biosynthesis/export protein D Daro_1750 surface antigen (D15):Surface antigen variable number K07277 SAM50; outer membrane protein insertion porin family D Daro_2982 Pyrrolo-quinoline quinone K17713 bamB; outer membrane protein assembly factor BamB D Daro_0847 NlpBDapX lipoprotein K07287 bamC; outer membrane protein assembly factor BamC D Daro_1603 putative competence lipoprotein precursor K05807 bamD; outer membrane protein assembly factor BamD D Daro_0935 SmpA/OmlA K06186 bamE; outer membrane protein assembly factor BamE D Daro_0462 surface antigen (D15) K07278 tamA; translocation and assembly module TamA D Daro_0461 Protein of unknown function DUF490 K09800 tamB; translocation and assembly module TamB D Daro_3421 OstA-like protein K09774 lptA; lipopolysaccharide export system protein LptA D Daro_3420 Protein of unknown function DUF1239 K11719 lptC; lipopolysaccharide export system protein LptC D Daro_3659 Organic solvent tolerance protein K04744 lptD; LPS-assembly protein D Daro_0543 Rare lipoprotein B K03643 lptE; LPS-assembly lipoprotein D Daro_3530 CBS:Transporter-associated region K06189 corC; hemolysin (HlyC) family protein D Daro_3105 LrgA K06518 cidA; holin-like protein D Daro_1606 Zinc transporter ZIP K16267 zipB; zinc and cadmium transporter D Daro_2252 Heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein D Daro_1875 Heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein D Daro_1178 Heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein D Daro_0296 Heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein D Daro_2801 Heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein D Daro_2626 Heavy metal efflux pump CzcA K15726 czcA; heavy metal efflux system protein D Daro_2265 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein D Daro_2480 Heavy metal efflux pump CzcA K07787 cusA; copper/silver efflux system protein D Daro_3828 Hydrophobe/amphiphile efflux-1 HAE1 K18902 bpeF; multidrug efflux pump D Daro_3761 Acriflavin resistance protein K18303 mexK; multidrug efflux pump D Daro_2161 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Daro_0450 Small multidrug resistance protein K03297 emrE; small multidrug resistance pump D Daro_3903 Small multidrug resistance protein K11741 sugE; quaternary ammonium compound-resistance protein SugE D Daro_2296 Protein of unknown function DUF6, transmembrane K08978 TC.BAT1; bacterial/archaeal transporter family protein D Daro_2968 RarD protein K05786 rarD; chloramphenicol-sensitive protein RarD D Daro_2632 Protein of unknown function UPF0060 K09771 TC.SMR3; small multidrug resistance family-3 protein D Daro_4182 Anaerobic c4-dicarboxylate membrane transporter K07792 dcuB; anaerobic C4-dicarboxylate transporter DcuB D Daro_1762 L-lactate permease K03303 lutP; lactate permease D Daro_1637 Na+/solute symporter K14393 actP; cation/acetate symporter D Daro_4010 Na+/solute symporter K14393 actP; cation/acetate symporter D Daro_0428 Na+/solute symporter K14393 actP; cation/acetate symporter D Daro_2994 Sodium:dicarboxylate symporter K11103 dctA; aerobic C4-dicarboxylate transport protein D Daro_0688 sodium/proton antiporter, NhaA family K03313 nhaA; Na+:H+ antiporter, NhaA family D Daro_2072 sodium/proton antiporter, CPA1 family K24160 NHA1; sodium/hydrogen antiporter D Daro_2753 sodium/proton antiporter, CPA1 family K11105 cvrA; potassium/hydrogen antiporter D Daro_3417 Kef-type potassium/proton antiporter, CPA2 family K03455 KEA1_2_3; K+:H+ antiporter D Daro_3169 Kef-type potassium/proton antiporter, CPA2 family K26735 KEA4_5_6; K+:H+ antiporter D Daro_4191 transporter, CPA2 family K26731 CHX; K+:H+ antiporter D Daro_2760 Benzoate membrane transport protein:Xanthine/uracil/vitamin C permease K05782 benE; benzoate membrane transport protein D Daro_0697 Cl-channel, voltage gated K03281 clcA; chloride channel protein, CIC family D Daro_3385 Chromate transporter K07240 chrA; chromate transporter D Daro_3555 Chromate transporter K07240 chrA; chromate transporter D Daro_3386 Chromate transporter K07240 chrA; chromate transporter D Daro_3945 High-affinity nickel-transporter K07241 hoxN; nickel/cobalt transporter (NiCoT) family protein D Daro_0571 Sulphate anion transporter K03321 TC.SULP; sulfate permease, SulP family D Daro_3904 Cyclic nucleotide-binding:Sulfate transporter/antisigma-factor antagonist STAS:Xanthine/uracil/vitamin C permease:Sulphate transporter K03321 TC.SULP; sulfate permease, SulP family D Daro_2993 TRAP dicarboxylate transporter-DctP subunit K11688 dctP; C4-dicarboxylate-binding protein DctP D Daro_2992 Tripartite ATP-independent periplasmic transporter, DctQ component K11689 dctQ; C4-dicarboxylate transporter, DctQ subunit D Daro_2991 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Daro_3576 TRAP C4-dicarboxylate transport system permease DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Daro_3389 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Daro_4021 TRAP dicarboxylate transporter, DctM subunit K11690 dctM; C4-dicarboxylate transporter, DctM subunit D Daro_3390 Tripartite ATP-independent periplasmic transporter, DctQ component K21394 yiaM; TRAP-type transport system small permease protein D Daro_3577 TRAP dicarboxylate transporter-DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Daro_3391 TRAP dicarboxylate transporter-DctP subunit K21395 yiaO; TRAP-type transport system periplasmic protein D Daro_2637 arsenite efflux ATP-binding protein ArsA K01551 arsA; arsenite/tail-anchored protein-transporting ATPase [EC:7.3.2.7 7.3.-.-] D Daro_2636 Arsenical-resistance protein ACR3 K03325 ACR3; arsenite transporter D Daro_0700 Bile acid:sodium symporter K03325 ACR3; arsenite transporter D Daro_2614 putative efflux protein K03325 ACR3; arsenite transporter D Daro_2414 Polysaccharide biosynthesis protein K16695 wzxC; lipopolysaccharide exporter D Daro_0708 Virulence factor MVIN-like protein K03980 murJ; putative peptidoglycan lipid II flippase D Daro_0262 Auxin Efflux Carrier K13936 mdcF; malonate transporter and related proteins D Daro_0205 Auxin Efflux Carrier K24180 mleP; malate permease and related proteins D Daro_1184 potassium transporter K03549 kup; KUP system potassium uptake protein D Daro_0485 potassium transporter K03549 kup; KUP system potassium uptake protein D Daro_3556 potassium transporter K03549 kup; KUP system potassium uptake protein D Daro_0303 Lysine exporter protein (LYSE/YGGA) K05834 rhtB; homoserine/homoserine lactone efflux protein D Daro_4125 AzlC-like protein K26605 azlC; branched chain amino acid efflux pump D Daro_4124 Protein of unknown function DUF931 K26606 azlD; branched chain amino acid efflux pump D Daro_2089 Protein of unknown function DUF125, transmembrane K22736 VIT; vacuolar iron transporter family protein D Daro_3499 cell division-specific peptidoglycan biosynthesis regulator FtsW K03588 ftsW; cell division protein FtsW D Daro_0933 Protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Daro_2248 Protein of unknown function UPF0016 K23541 TMEM165; Ca2+/H+ antiporter, TMEM165/GDT1 family D Daro_1110 Iron permease FTR1 K07243 FTR; high-affinity iron transporter D Daro_1113 conserved hypothetical protein K07230 p19; periplasmic iron binding protein D Daro_1027 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Daro_3908 TonB, C-terminal K03832 tonB; periplasmic protein TonB D Daro_4093 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Daro_3111 TonB, C-terminal K03832 tonB; periplasmic protein TonB D Daro_0720 TonB, C-terminal K03832 tonB; periplasmic protein TonB D Daro_1116 outer membrane transport energization protein TonB K03832 tonB; periplasmic protein TonB D Daro_0695 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein D Daro_2925 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein D Daro_4052 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein D Daro_2926 hypothetical protein K03640 pal; peptidoglycan-associated lipoprotein D Daro_2109 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein D Daro_3694 OmpA/MotB K03640 pal; peptidoglycan-associated lipoprotein D Daro_0062 biopolymer transport protein TolA K03646 tolA; colicin import membrane protein D Daro_4053 TolB, N-terminal:WD40-like Beta Propeller K03641 tolB; TolB protein D Daro_3203 Inorganic H+ pyrophosphatase K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1] D Daro_4020 alpha subunit of malonate decarboxylase K13929 mdcA; malonate decarboxylase alpha subunit [EC:2.3.1.187] D Daro_4019 Malonate decarboxylase delta subunit K13931 mdcC; malonate decarboxylase delta subunit D Daro_2278 Cytochrome c biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Daro_2956 Cytochrome c biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Daro_3156 Cytochrome c biogenesis protein, transmembrane region K06196 ccdA; cytochrome c-type biogenesis protein D Daro_2253 Secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system D Daro_2627 Secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system D Daro_1876 Secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system D Daro_0295 Secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system D Daro_2800 Secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system D Daro_1177 Secretion protein HlyD K15727 czcB; membrane fusion protein, heavy metal efflux system D Daro_2618 hypothetical protein K15727 czcB; membrane fusion protein, heavy metal efflux system D Daro_2264 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system D Daro_2479 Secretion protein HlyD K07798 cusB; membrane fusion protein, copper/silver efflux system D Daro_3201 Type I secretion membrane fusion protein, HlyD K12542 lapC; membrane fusion protein, adhesin transport system D Daro_3829 Secretion protein HlyD K18901 bpeE; membrane fusion protein, multidrug efflux system D Daro_3760 Secretion protein HlyD K18302 mexJ; membrane fusion protein, multidrug efflux system D Daro_2160 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Daro_2957 Secretion protein HlyD K07799 mdtA; membrane fusion protein, multidrug efflux system D Daro_2399 probable exopolysaccharide biosynthesis protein K00903 epsB; protein-tyrosine kinase [EC:2.7.10.3] D Daro_2398 Lipopolysaccharide biosynthesis K25590 epsF; protein tyrosine kinase modulator D Daro_1068 Small GTP-binding protein domain K04759 feoB; ferrous iron transport protein B D Daro_3996 Cytochrome c-type biogenesis protein CcmF K02198 ccmF; cytochrome c-type biogenesis protein CcmF D Daro_1171 MltA-interacting MipA K07274 mipA; MipA family protein D Daro_4195 putative outer membrane protein K07274 mipA; MipA family protein C 02044 Secretion system [BR:dar02044] D Daro_3926 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Daro_1165 Outer membrane efflux protein K12340 tolC; outer membrane protein D Daro_3202 ABC transporter, transmembrane region:ABC transporter related protein K12541 lapB; ATP-binding cassette, subfamily C, bacterial LapB D Daro_3201 Type I secretion membrane fusion protein, HlyD K12542 lapC; membrane fusion protein, adhesin transport system D Daro_0706 Type I secretion outer membrane protein, TolC K12543 lapE; outer membrane protein, adhesin transport system D Daro_2401 ATPase K02450 gspA; general secretion pathway protein A D Daro_3216 type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal K02453 gspD; general secretion pathway protein D D Daro_3405 type II and III secretion system protein K02453 gspD; general secretion pathway protein D D Daro_3223 type II secretion system protein E K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Daro_1151 type II secretion system protein E:General secretory system II, protein E, N-terminal K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Daro_3407 type II secretion system protein E:General secretory system II, protein E, N-terminal K02454 gspE; general secretion pathway protein E [EC:7.4.2.8] D Daro_3222 type II secretion system protein K02455 gspF; general secretion pathway protein F D Daro_3217 Prokaryotic N-terminal methylation site K02456 gspG; general secretion pathway protein G D Daro_3218 general secretion pathway protein G K02456 gspG; general secretion pathway protein G D Daro_3221 General secretion pathway protein G K02456 gspG; general secretion pathway protein G D Daro_0637 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Daro_3356 Fimbrial protein pilin:Bacterial general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA D Daro_0639 type II secretion system protein E:General secretory system II, protein E, N-terminal K02652 pilB; type IV pilus assembly protein PilB D Daro_0638 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Daro_3408 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Daro_3041 general secretion pathway protein H K02655 pilE; type IV pilus assembly protein PilE D Daro_2987 TPR repeat K02656 pilF; type IV pilus assembly protein PilF D Daro_3899 Response regulator receiver K02657 pilG; twitching motility two-component system response regulator PilG D Daro_3898 Response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH D Daro_3897 CheW protein K02659 pilI; twitching motility protein PilI D Daro_3896 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D Daro_0210 Type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Daro_0211 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN D Daro_0212 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO D Daro_0213 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP D Daro_0214 type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal K02666 pilQ; type IV pilus assembly protein PilQ D Daro_3883 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Daro_1725 Pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Daro_3882 Pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Daro_3039 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D Daro_3037 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D Daro_3036 putative Tfp pilus assembly protein tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D Daro_2195 Type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Daro_3040 General secretion pathway protein H K08084 fimT; type IV fimbrial biogenesis protein FimT D Daro_0866 conserved hypothetical protein K08086 fimV; pilus assembly protein FimV D Daro_3369 Peptidoglycan-binding LysM K08086 fimV; pilus assembly protein FimV D Daro_0883 general secretion pathway protein H K10924 mshA; MSHA pilin protein MshA D Daro_0882 general secretion pathway protein H K10924 mshA; MSHA pilin protein MshA D Daro_0884 Prokaryotic N-terminal methylation site K10926 mshC; MSHA pilin protein MshC D Daro_0885 hypothetical protein K10927 mshD; MSHA pilin protein MshD D Daro_0879 type II secretion system protein E:General secretory system II, protein E, N-terminal K12276 mshE; MSHA biogenesis protein MshE D Daro_0880 type II secretion system protein K12278 mshG; MSHA biogenesis protein MshG D Daro_0889 hypothetical protein K12279 mshI; MSHA biogenesis protein MshI D Daro_0891 hypothetical protein K12280 mshJ; MSHA biogenesis protein MshJ D Daro_0892 hypothetical protein K12281 mshK; MSHA biogenesis protein MshK D Daro_0893 type II and III secretion system protein:Secretin, N-terminal:Secretin/TonB, short N-terminal K12282 mshL; MSHA biogenesis protein MshL D Daro_0894 general secretion pathway protein, ATPase K12283 mshM; MSHA biogenesis protein MshM D Daro_3404 ATPase K12283 mshM; MSHA biogenesis protein MshM D Daro_0895 TPR repeat K12284 mshN; MSHA biogenesis protein MshN D Daro_0886 general secretion pathway protein H K12285 mshO; MSHA biogenesis protein MshO D Daro_0887 MSHA biogenesis protein MshP K12286 mshP; MSHA biogenesis protein MshP D Daro_0888 hypothetical protein K12287 mshQ; MSHA biogenesis protein MshQ D Daro_3886 Protein of unknown function YGGT K02221 yggT; YggT family protein D Daro_3888 Competence protein ComEA helix-hairpin-helix region K02237 comEA; competence protein ComEA D Daro_0466 Competence protein ComEA helix-hairpin-helix region K02237 comEA; competence protein ComEA D Daro_2832 ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2 K02238 comEC; competence protein ComEC D Daro_0740 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Daro_0739 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Daro_0778 possible flagellar biosynthetic protein K04061 flhB2; flagellar biosynthesis protein D Daro_0773 Flagellar FliF M-ring protein K02409 fliF; flagellar M-ring protein FliF D Daro_0771 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Daro_0770 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Daro_0765 Type III secretion system outer membrane O protein K02417 fliN; flagellar motor switch protein FliN D Daro_0764 Flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D Daro_0763 Flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Daro_0762 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Daro_0761 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Daro_2331 hypothetical protein K12056 traG; conjugal transfer mating pair stabilization protein TraG D Daro_2664 hypothetical protein K12056 traG; conjugal transfer mating pair stabilization protein TraG D Daro_2329 conserved hypothetical protein K12057 traF; conjugal transfer pilus assembly protein TraF D Daro_2662 conserved hypothetical protein K12057 traF; conjugal transfer pilus assembly protein TraF D Daro_2660 conserved hypothetical protein K12058 traN; conjugal transfer mating pair stabilization protein TraN D Daro_2327 conserved hypothetical protein K12058 traN; conjugal transfer mating pair stabilization protein TraN D Daro_2326 conserved hypothetical protein K12059 trbC; conjugal transfer pilus assembly protein TrbC D Daro_2659 conserved hypothetical protein K12059 trbC; conjugal transfer pilus assembly protein TrbC D Daro_2325 TraU K12060 traU; conjugal transfer pilus assembly protein TraU D Daro_2658 TraU K12060 traU; conjugal transfer pilus assembly protein TraU D Daro_2657 conserved hypothetical protein K12061 traW; conjugal transfer pilus assembly protein TraW D Daro_2324 conserved hypothetical protein K12061 traW; conjugal transfer pilus assembly protein TraW D Daro_2322 conserved hypothetical protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI D Daro_2655 conserved hypothetical protein K12062 trbI; conjugal transfer pilin signal peptidase TrbI D Daro_2653 conserved hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC D Daro_2320 conserved hypothetical protein K12063 traC; conjugal transfer ATP-binding protein TraC D Daro_2652 conserved hypothetical protein K12064 traV; conjugal transfer pilus assembly protein TraV D Daro_2319 conserved hypothetical protein K12064 traV; conjugal transfer pilus assembly protein TraV D Daro_2650 TraB pilus assembly K12065 traB; conjugal transfer pilus assembly protein TraB D Daro_2317 TraB pilus assembly K12065 traB; conjugal transfer pilus assembly protein TraB D Daro_2649 conserved hypothetical protein K12066 traK; conjugal transfer pilus assembly protein TraK D Daro_2316 conserved hypothetical protein K12066 traK; conjugal transfer pilus assembly protein TraK D Daro_2315 plasmid-like conjugative transfer protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE D Daro_2648 plasmid-like conjugative transfer protein TraE K12067 traE; conjugal transfer pilus assembly protein TraE D Daro_2647 TraL K12068 traL; conjugal transfer pilus assembly protein TraL D Daro_2314 TraL K12068 traL; conjugal transfer pilus assembly protein TraL D Daro_2306 Relaxase K12070 traI; conjugal transfer pilus assembly protein TraI D Daro_2597 Relaxase K12070 traI; conjugal transfer pilus assembly protein TraI D Daro_2307 conserved hypothetical protein K12071 traD; conjugal transfer pilus assembly protein TraD D Daro_2598 hypothetical protein K12071 traD; conjugal transfer pilus assembly protein TraD D Daro_2318 periplasmic thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Daro_3509 putative thiol:disulfide interchange protein (periplasmic) K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Daro_2651 periplasmic thiol:disulfide interchange protein K03981 dsbC; thiol:disulfide interchange protein DsbC [EC:5.3.4.1] D Daro_2663 TraH K12072 traH; conjugative transfer pilus assembly protein TraH D Daro_2330 TraH K12072 traH; conjugative transfer pilus assembly protein TraH D Daro_1770 Lipolytic enzyme, G-D-S-L K12686 apeE; outer membrane lipase/esterase D Daro_2188 ImcF-related:Protein of unknown function DUF1215 K11891 impL; type VI secretion system protein ImpL D Daro_2181 putative membrane protein K11892 impK; type VI secretion system protein ImpK D Daro_2180 Protein of unknown function DUF876, bacterial K11893 impJ; type VI secretion system protein ImpJ D Daro_2172 Protein of unknown function DUF1305 K11895 impH; type VI secretion system protein ImpH D Daro_2173 Protein of unknown function DUF879, bacterial K11896 impG; type VI secretion system protein ImpG D Daro_2174 Protein of unknown function DUF1316 K11897 impF; type VI secretion system protein ImpF D Daro_2176 Protein of unknown function DUF877 K11900 impC; type VI secretion system protein ImpC D Daro_2177 Uncharacterized conserved protein UCP028301 K11901 impB; type VI secretion system protein ImpB D Daro_2185 ImpA, N-terminal K11902 impA; type VI secretion system protein ImpA D Daro_2175 Protein of unknown function DUF796 K11903 hcp; type VI secretion system secreted protein Hcp D Daro_2169 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Daro_2182 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Daro_0391 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Daro_0394 Rhs element Vgr protein K11904 vgrG; type VI secretion system secreted protein VgrG D Daro_2179 putative lipoprotein K11906 vasD; type VI secretion system protein VasD D Daro_2171 AAA ATPase, central region:Clp, N terminal K11907 vasG; type VI secretion system protein VasG D Daro_2187 conserved hypothetical protein K11890 impM; type VI secretion system protein ImpM D Daro_3488 protein translocase subunit secA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8] D Daro_0613 protein translocase subunit secB K03071 secB; preprotein translocase subunit SecB D Daro_3280 SecD/SecF/SecDF export membrane protein:SecD export membrane protein K03072 secD; preprotein translocase subunit SecD D Daro_0306 protein translocase subunit secE/sec61 gamma K03073 secE; preprotein translocase subunit SecE D Daro_3281 protein translocase subunit secF K03074 secF; preprotein translocase subunit SecF D Daro_0948 protein translocase subunit secG K03075 secG; preprotein translocase subunit SecG D Daro_0339 protein translocase subunit secY/sec61 alpha K03076 secY; preprotein translocase subunit SecY D Daro_0642 signal recognition particle subunit FFH/SRP54 (srp54) K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4] D Daro_3718 signal recognition particle-docking protein FtsY K03110 ftsY; fused signal recognition particle receptor D Daro_3279 protein translocase subunit yajC K03210 yajC; preprotein translocase subunit YajC D Daro_4201 protein translocase subunit yidC K03217 yidC; YidC/Oxa1 family membrane protein insertase D Daro_3375 Twin-arginine translocation protein TatA/E K03116 tatA; sec-independent protein translocase protein TatA D Daro_3374 Sec-independent protein translocase TatB K03117 tatB; sec-independent protein translocase protein TatB D Daro_3373 Sec-independent protein translocase TatC K03118 tatC; sec-independent protein translocase protein TatC C 02042 Bacterial toxins [BR:dar02042] D Daro_3215 CBS:Protein of unknown function DUF21:Transporter-associated region K03699 tlyC; magnesium and cobalt exporter, CNNM family D Daro_0640 CBS:Protein of unknown function DUF21:Transporter-associated region K03699 tlyC; magnesium and cobalt exporter, CNNM family D Daro_3442 HylII K11068 hlyIII; hemolysin III C 02022 Two-component system [BR:dar02022] D Daro_3568 PAS/PAC sensor signal transduction histidine kinase K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3] D Daro_3567 Phosphate regulon transcriptional regulatory protein phoB K07657 phoB; two-component system, OmpR family, phosphate regulon response regulator PhoB D Daro_1632 Response regulator receiver K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP D Daro_1979 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07638 envZ; two-component system, OmpR family, osmolarity sensor histidine kinase EnvZ [EC:2.7.13.3] D Daro_3147 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07639 rstB; two-component system, OmpR family, sensor histidine kinase RstB [EC:2.7.13.3] D Daro_3177 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07641 creC; two-component system, OmpR family, sensor histidine kinase CreC [EC:2.7.13.3] D Daro_3176 two component transcriptional regulator, winged helix family K07663 creB; two-component system, OmpR family, catabolic regulation response regulator CreB D Daro_2258 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Daro_2473 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Daro_2259 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D Daro_2474 Heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D Daro_1080 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Daro_3558 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K07646 kdpD; two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3] D Daro_3557 Response regulator receiver:Transcriptional regulatory protein, C-terminal K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Daro_1079 two component transcriptional regulator, winged helix family K07667 kdpE; two-component system, OmpR family, KDP operon response regulator KdpE D Daro_1580 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D Daro_1181 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07649 tctE; two-component system, OmpR family, sensor histidine kinase TctE [EC:2.7.13.3] D Daro_2816 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Daro_2297 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02484 K02484; two-component system, OmpR family, sensor kinase [EC:2.7.13.3] D Daro_0704 Response regulator receiver:Transcriptional regulatory protein, C-terminal K02483 K02483; two-component system, OmpR family, response regulator D Daro_2298 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Daro_0429 Response regulator receiver:Transcriptional regulatory protein, C-terminal K02483 K02483; two-component system, OmpR family, response regulator D Daro_3146 Response regulator receiver:Transcriptional regulatory protein, C-terminal K02483 K02483; two-component system, OmpR family, response regulator D Daro_1980 Response regulator receiver:Transcriptional regulatory protein, C-terminal K02483 K02483; two-component system, OmpR family, response regulator D Daro_0224 Response regulator receiver:Transcriptional regulatory protein, C-terminal K02483 K02483; two-component system, OmpR family, response regulator D Daro_1180 two component transcriptional regulator, winged helix family K02483 K02483; two-component system, OmpR family, response regulator D Daro_1661 Response regulator receiver K02483 K02483; two-component system, OmpR family, response regulator D Daro_1878 Response regulator receiver:Transcriptional regulatory protein, C-terminal K02483 K02483; two-component system, OmpR family, response regulator D Daro_3352 Response regulator receiver:Transcriptional regulatory protein, C-terminal K02483 K02483; two-component system, OmpR family, response regulator D Daro_3309 Response regulator receiver K02483 K02483; two-component system, OmpR family, response regulator D Daro_1581 Response regulator receiver:Transcriptional regulatory protein, C-terminal K02483 K02483; two-component system, OmpR family, response regulator D Daro_2815 Response regulator receiver:Transcriptional regulatory protein, C-terminal K02483 K02483; two-component system, OmpR family, response regulator D Daro_0833 GAF:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase, dimerization and phosphoacceptor region K07673 narX; two-component system, NarL family, nitrate/nitrite sensor histidine kinase NarX [EC:2.7.13.3] D Daro_0834 regulatory protein, LuxR:Response regulator receiver K07684 narL; two-component system, NarL family, nitrate/nitrite response regulator NarL D Daro_1029 signal transduction histidine kinase, glucose-6-phosphate specific K07675 uhpB; two-component system, NarL family, sensor histidine kinase UhpB [EC:2.7.13.3] D Daro_1030 two component transcriptional regulator, LuxR family K07689 uvrY; two-component system, NarL family, invasion response regulator UvrY D Daro_3680 Histidine kinase internal region K08082 algZ; two-component system, LytTR family, sensor histidine kinase AlgZ [EC:2.7.13.3] D Daro_3679 transcriptional regulator, LytR/AlgR family K08083 algR; two-component system, LytTR family, response regulator AlgR D Daro_2094 GAF:ATP-binding region, ATPase-like:Histidine kinase internal region:5TM Receptors of the LytS-YhcK type, transmembrane region K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3] D Daro_2093 transcriptional regulator, LytR/AlgR family K02477 K02477; two-component system, LytTR family, response regulator D Daro_3759 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K07708 glnL; two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] D Daro_3758 Helix-turn-helix, Fis-type:Nitrogen regulation protein NR(I) K07712 glnG; two-component system, NtrC family, nitrogen regulation response regulator GlnG D Daro_0030 multi-sensor signal transduction histidine kinase K13598 ntrY; two-component system, NtrC family, nitrogen regulation sensor histidine kinase NtrY [EC:2.7.13.3] D Daro_0031 Helix-turn-helix, Fis-type K13599 ntrX; two-component system, NtrC family, nitrogen regulation response regulator NtrX D Daro_2923 two component, sigma54 specific, transcriptional regulator, Fis family K07713 zraR; two-component system, NtrC family, response regulator HydG D Daro_2600 two component, sigma54 specific, transcriptional regulator, Fis family K07714 atoC; two-component system, NtrC family, response regulator AtoC D Daro_2585 Helix-turn-helix, Fis-type K07714 atoC; two-component system, NtrC family, response regulator AtoC D Daro_0661 signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Daro_0662 Helix-turn-helix, Fis-type K02667 pilR; two-component system, NtrC family, response regulator PilR D Daro_1802 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K07711 glrK; two-component system, NtrC family, sensor histidine kinase GlrK [EC:2.7.13.3] D Daro_1804 two component, sigma54 specific, transcriptional regulator, Fis family K07715 glrR; two-component system, NtrC family, response regulator GlrR D Daro_2150 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D Daro_0478 histidine kinase K10125 dctB; two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:2.7.13.3] D Daro_0477 two component, sigma54 specific, transcriptional regulator, Fis family K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D Daro_2148 Helix-turn-helix, Fis-type K10126 dctD; two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD D Daro_3946 PAS/PAC sensor signal transduction histidine kinase K19661 hupT; two-component system, NtrC family, sensor histidine kinase HupT/HoxJ [EC:2.7.13.3] D Daro_3962 two component, sigma54 specific, transcriptional regulator, Fis family K19641 hupR; two-component system, NtrC family, response regulator HupR/HoxA D Daro_3963 Enoyl-CoA hydratase/isomerase:Formyl transferase, N-terminal:Formyl transferase, C-terminal K19640 hypX; putative two-component system protein, hydrogenase maturation factor HypX/HoxX D Daro_3017 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_0965 PAS:Hemerythrin HHE cation binding region K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_0967 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_2924 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_1828 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_2601 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K02482 flgS; two-component system, NtrC family, sensor kinase [EC:2.7.13.3] D Daro_2438 two component, sigma54 specific, transcriptional regulator, Fis family K02481 flgR; two-component system, NtrC family, response regulator D Daro_0726 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_0738 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_1142 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_1596 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0725 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0736 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0555 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_1139 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_3542 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_1148 CheB methylesterase:Response regulator receiver K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Daro_0732 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Daro_2045 CheB methylesterase:MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Daro_0734 Response regulator receiver:CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Daro_0735 Response regulator receiver:CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Daro_3895 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Daro_3899 Response regulator receiver K02657 pilG; twitching motility two-component system response regulator PilG D Daro_3898 Response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH D Daro_2995 PAS/PAC sensor signal transduction histidine kinase K11711 dctS; two-component system, LuxR family, sensor histidine kinase DctS [EC:2.7.13.3] D Daro_2996 regulatory protein, LuxR:Response regulator receiver K11712 dctR; two-component system, LuxR family, response regulator DctR D Daro_2490 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K13040 ttrS; two-component system, LuxR family, sensor histidine kinase TtrS [EC:2.7.13.3] D Daro_0685 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K14986 fixL; two-component system, LuxR family, sensor kinase FixL [EC:2.7.13.3] D Daro_2491 regulatory protein, LuxR:Response regulator receiver K14987 fixJ; two-component system, LuxR family, response regulator FixJ D Daro_0774 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Daro_0775 Helix-turn-helix, Fis-type K10943 flrC; two-component system, response regulator FlrC D Daro_2902 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain K13815 rpfG; two-component system, response regulator RpfG D Daro_1586 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K15011 regB; two-component system, sensor histidine kinase RegB [EC:2.7.13.3] D Daro_1585 Helix-turn-helix, Fis-type K15012 regA; two-component system, response regulator RegA D Daro_0460 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_3686 signal transduction histidine kinase K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_3308 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_4037 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K20974 K20974; two-component system, sensor histidine kinase [EC:2.7.13.3] D Daro_2901 Hpt K20976 hptB; histidine phosphotransfer protein HptB D Daro_0347 PAS protein K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Daro_0106 Stage II sporulation E K20977 hsbR; two-component system, HptB-dependent secretion and biofilm response regulator D Daro_2798 Response regulator receiver K22010 pdtaR; two-component system, response regulator PdtaR D Daro_0829 Response regulator receiver:ANTAR K07183 nasT; two-component system, response regulator / RNA-binding antiterminator D Daro_3006 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_0420 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_0223 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_0008 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2890 Peptidase M52, hydrogen uptake protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2891 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2934 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2946 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_1441 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_0937 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Hpt K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_2105 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_3714 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_3872 PAS protein K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_3459 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] D Daro_3350 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3] C 02035 Bacterial motility proteins [BR:dar02035] D Daro_0726 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_0738 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_1142 CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt K03407 cheA; two-component system, chemotaxis family, sensor kinase CheA [EC:2.7.13.3] D Daro_1144 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW D Daro_0727 CheW-like protein K03408 cheW; purine-binding chemotaxis protein CheW D Daro_1145 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Daro_0731 CheD K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Daro_1147 probable chemotaxis protein K03411 cheD; chemotaxis protein CheD [EC:3.5.1.44] D Daro_1146 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Daro_0730 MCP methyltransferase, CheR-type K00575 cheR; chemotaxis protein methyltransferase CheR [EC:2.1.1.80] D Daro_1148 CheB methylesterase:Response regulator receiver K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Daro_0732 response regulator receiver modulated CheB methylesterase K03412 cheB; two-component system, chemotaxis family, protein-glutamate methylesterase/glutaminase [EC:3.1.1.61 3.5.1.44] D Daro_2045 CheB methylesterase:MCP methyltransferase, CheR-type K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61] D Daro_1596 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0725 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0736 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0555 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_1139 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_3542 Response regulator receiver K03413 cheY; two-component system, chemotaxis family, chemotaxis protein CheY D Daro_0737 chemotaxis phosphatase, CheZ K03414 cheZ; chemotaxis protein CheZ D Daro_0734 Response regulator receiver:CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Daro_0735 Response regulator receiver:CheW-like protein K03415 cheV; two-component system, chemotaxis family, chemotaxis protein CheV D Daro_0728 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0724 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0729 PAS protein K03406 mcp; methyl-accepting chemotaxis protein D Daro_1902 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_2728 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0926 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_2933 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_3097 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_1143 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_3112 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0837 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0561 methyl-accepting chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_1140 chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_2834 Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer K03406 mcp; methyl-accepting chemotaxis protein D Daro_0674 PAS protein K03776 aer; aerotaxis receptor D Daro_1363 PAS protein K03776 aer; aerotaxis receptor D Daro_0771 Flagellar assembly protein FliH K02411 fliH; flagellar assembly protein FliH D Daro_0770 ATPase FliI/YscN K02412 fliI; flagellum-specific ATP synthase [EC:7.4.2.8] D Daro_0769 Flagellar FliJ and related protein K02413 fliJ; flagellar protein FliJ D Daro_0764 Flagellar biosynthesis protein, FliO K02418 fliO; flagellar protein FliO/FliZ D Daro_0763 Flagellar transport protein FliP K02419 fliP; flagellar biosynthesis protein FliP D Daro_0762 Flagellar biosynthesis protein FliQ K02420 fliQ; flagellar biosynthesis protein FliQ D Daro_0761 Flagellar biosynthesis protein FliR K02421 fliR; flagellar biosynthesis protein FliR D Daro_0740 Flagellar biosynthesis protein FlhA K02400 flhA; flagellar biosynthesis protein FlhA D Daro_0739 Flagellar biosynthetic protein FlhB K02401 flhB; flagellar biosynthesis protein FlhB D Daro_0772 Flagellar motor switch protein FliG K02410 fliG; flagellar motor switch protein FliG D Daro_0766 Flagellar motor switch protein FliM K02416 fliM; flagellar motor switch protein FliM D Daro_0765 Type III secretion system outer membrane O protein K02417 fliN; flagellar motor switch protein FliN D Daro_0773 Flagellar FliF M-ring protein K02409 fliF; flagellar M-ring protein FliF D Daro_0756 Flagellar P-ring protein K02394 flgI; flagellar P-ring protein FlgI D Daro_0748 flagellar protein FlgA K02386 flgA; flagellar basal body P-ring formation protein FlgA D Daro_0755 Flagellar L-ring protein K02393 flgH; flagellar L-ring protein FlgH D Daro_0767 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Daro_1846 Flagellar basal body-associated protein FliL K02415 fliL; flagellar protein FliL D Daro_0776 Flagellar hook-basal body complex protein FliE K02408 fliE; flagellar hook-basal body complex protein FliE D Daro_0768 Flagellar hook-length control protein K02414 fliK; flagellar hook-length control protein FliK D Daro_2272 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Daro_0749 Flagellar basal-body rod protein FlgB K02387 flgB; flagellar basal-body rod protein FlgB D Daro_0750 Flagellar basal-body rod protein FlgC K02388 flgC; flagellar basal-body rod protein FlgC D Daro_0751 Flagellar hook capping protein K02389 flgD; flagellar basal-body rod modification protein FlgD D Daro_0753 Protein of unknown function DUF1078 K02391 flgF; flagellar basal-body rod protein FlgF D Daro_0754 Protein of unknown function DUF1078 K02392 flgG; flagellar basal-body rod protein FlgG D Daro_0757 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase K02395 flgJ; peptidoglycan hydrolase FlgJ D Daro_0752 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE K02390 flgE; flagellar hook protein FlgE D Daro_0758 Protein of unknown function DUF1078 K02396 flgK; flagellar hook-associated protein 1 D Daro_0759 Flagellin, N-terminal K02397 flgL; flagellar hook-associated protein 3 FlgL D Daro_0746 FlgN K02399 flgN; flagellar biosynthesis protein FlgN D Daro_0784 Flagellin, C-terminal:Flagellin, N-terminal K02406 fliC; flagellin D Daro_0782 Flagellar hook-associated protein 2, N-terminal:Flagellar hook-associated 2, C-terminal K02407 fliD; flagellar hook-associated protein 2 D Daro_0781 Flagellar protein FliS K02422 fliS; flagellar secretion chaperone FliS D Daro_2596 hypothetical protein K02402 flhC; flagellar transcriptional activator FlhC D Daro_2305 hypothetical protein K02402 flhC; flagellar transcriptional activator FlhC D Daro_0743 RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG K02405 fliA; RNA polymerase sigma factor FliA D Daro_0722 chemotaxis motA protein K02556 motA; chemotaxis protein MotA D Daro_0744 MotA/TolQ/ExbB proton channel K02556 motA; chemotaxis protein MotA D Daro_0723 OmpA/MotB K02557 motB; chemotaxis protein MotB D Daro_0745 OmpA/MotB K02557 motB; chemotaxis protein MotB D Daro_0774 PAS/PAC sensor signal transduction histidine kinase K10942 flrB; two-component system, sensor histidine kinase FlrB [EC:2.7.13.3] D Daro_0775 Helix-turn-helix, Fis-type K10943 flrC; two-component system, response regulator FlrC D Daro_2743 Uncharacterized protein conserved in bacteria K13626 fliW; flagellar assembly factor FliW D Daro_0747 hypothetical protein K02398 flgM; negative regulator of flagellin synthesis FlgM D Daro_0783 Flagellar protein FlaG protein K06603 flaG; flagellar protein FlaG D Daro_0741 GTP-binding signal recognition particle SRP54, G-domain K02404 flhF; flagellar biosynthesis protein FlhF D Daro_0742 putative MinD-related protein K04562 flhG; flagellar biosynthesis protein FlhG D Daro_3899 Response regulator receiver K02657 pilG; twitching motility two-component system response regulator PilG D Daro_3898 Response regulator receiver K02658 pilH; twitching motility two-component system response regulator PilH D Daro_3897 CheW protein K02659 pilI; twitching motility protein PilI D Daro_3896 chemotaxis sensory transducer K02660 pilJ; twitching motility protein PilJ D Daro_3895 Response regulator receiver:CheW-like protein:ATP-binding region, ATPase-like:Hpt K06596 chpA; chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) D Daro_0662 Helix-turn-helix, Fis-type K02667 pilR; two-component system, NtrC family, response regulator PilR D Daro_0661 signal transduction histidine kinase K02668 pilS; two-component system, NtrC family, sensor histidine kinase PilS [EC:2.7.13.3] D Daro_3883 pilus retraction ATPase PilT K02669 pilT; twitching motility protein PilT D Daro_1725 Pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Daro_3882 Pilus retraction protein PilT K02670 pilU; twitching motility protein PilU D Daro_3356 Fimbrial protein pilin:Bacterial general secretion pathway protein H K02650 pilA; type IV pilus assembly protein PilA D Daro_0639 type II secretion system protein E:General secretory system II, protein E, N-terminal K02652 pilB; type IV pilus assembly protein PilB D Daro_0638 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Daro_3408 type II secretion system protein K02653 pilC; type IV pilus assembly protein PilC D Daro_0637 type 4 prepilin peptidase 1, Aspartic peptidase, MEROPS family A24A K02654 pilD; leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] D Daro_2987 TPR repeat K02656 pilF; type IV pilus assembly protein PilF D Daro_0214 type II and III secretion system protein:NolW-like:Secretin/TonB, short N-terminal K02666 pilQ; type IV pilus assembly protein PilQ D Daro_0213 Pilus assembly protein, PilQ K02665 pilP; type IV pilus assembly protein PilP D Daro_0212 Pilus assembly protein, PilO K02664 pilO; type IV pilus assembly protein PilO D Daro_0211 Fimbrial assembly K02663 pilN; type IV pilus assembly protein PilN D Daro_0210 Type IV pilus assembly protein PilM K02662 pilM; type IV pilus assembly protein PilM D Daro_2195 Type IV pilus assembly PilZ K02676 pilZ; type IV pilus assembly protein PilZ D Daro_3039 hypothetical protein K02671 pilV; type IV pilus assembly protein PilV D Daro_3037 hypothetical protein K02673 pilX; type IV pilus assembly protein PilX D Daro_3036 putative Tfp pilus assembly protein tip-associated adhesin PilY1 K02674 pilY1; type IV pilus assembly protein PilY1 D Daro_3041 general secretion pathway protein H K02655 pilE; type IV pilus assembly protein PilE C 03037 Cilium and associated proteins C 04812 Cytoskeleton proteins [BR:dar04812] D Daro_1971 Protein of unknown function DUF52 K06990 MEMO1; MEMO1 family protein D Daro_0116 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Daro_2530 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM D Daro_2217 plasmid segregation actin-type ATPase ParM K18640 parM; plasmid segregation protein ParM D Daro_3493 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Daro_3494 cell division protein FtsA K03590 ftsA; cell division protein FtsA D Daro_0275 septum site-determining protein MinC K03610 minC; septum site-determining protein MinC D Daro_0276 septum site-determining protein MinD K03609 minD; septum site-determining protein MinD D Daro_0277 cell division topological specificity factor MinE K03608 minE; cell division topological specificity factor D Daro_4105 chromosome segregation ATPase K03496 parA; chromosome partitioning protein D Daro_0805 Cobyrinic acid a,c-diamide synthase K03496 parA; chromosome partitioning protein D Daro_0550 putative partition-related protein K03496 parA; chromosome partitioning protein D Daro_4106 chromosome segregation DNA-binding protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_2219 ParB-like nuclease K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_2542 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein D Daro_3014 ParB family protein K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein C 04147 Exosome [BR:dar04147] D Daro_1127 Heat shock protein Hsp90:ATP-binding region, ATPase-like protein K04079 HSP90A; molecular chaperone HtpG D Daro_2364 enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11] D Daro_3592 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Daro_3625 glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12] D Daro_3594 phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3] D Daro_2117 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Daro_3595 pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40] D Daro_0563 Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24] D Daro_0426 Chaperonin Cpn60/TCP-1 K04077 groEL; chaperonin GroEL [EC:5.6.1.7] D Daro_0923 Heat shock protein Hsp70 K04043 dnaK; molecular chaperone DnaK D Daro_0581 glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9] D Daro_2338 inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205] D Daro_0317 translation elongation factor 1A (EF-1A/EF-Tu) K02358 tuf; elongation factor Tu D Daro_0305 Translation elongation factor Tu:Small GTP-binding protein domain K02358 tuf; elongation factor Tu D Daro_1851 ATPase, E1-E2 type K01539 ATP1A; sodium/potassium-transporting ATPase subunit alpha [EC:7.2.2.13] D Daro_0004 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Daro_3376 Histidine triad (HIT) protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-] D Daro_2355 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_1553 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_0249 AMP-dependent synthetase and ligase K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3] D Daro_3022 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0098 Thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_1545 3-ketoacyl-CoA thiolase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9] D Daro_0186 adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1] D Daro_3205 Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3] D Daro_3681 argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1] D Daro_3031 argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5] D Daro_3589 D-fructose 1,6-bisphosphatase K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11] D Daro_0586 1,4-alpha-glucan branching enzyme K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18] D Daro_1922 glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30] D Daro_0077 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_3763 L-glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2] D Daro_0626 porphobilinogen synthase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24] D Daro_0453 pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96] D Daro_3229 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] D Daro_3667 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] D Daro_3002 Peptidase M48, Ste24p K06013 STE24; STE24 endopeptidase [EC:3.4.24.84] D Daro_2857 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_0440 dihydrolipoamide dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4] D Daro_1212 Electron transfer flavoprotein beta-subunit:Electron transfer flavoprotein, alpha subunit K03522 fixB; electron transfer flavoprotein alpha subunit D Daro_2721 Glu/Leu/Phe/Val dehydrogenase, C terminal:Glu/Leu/Phe/Val dehydrogenase, dimerization region K00261 GLUD1_2; glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] D Daro_2070 glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] D Daro_0947 triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1] D Daro_1882 Lipocalin-related protein and Bos/Can/Equ allergen K03098 APOD; apolipoprotein D and lipocalin family protein C 02048 Prokaryotic defense system [BR:dar02048] D Daro_2214 hypothetical protein K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D Daro_1308 Type I site-specific deoxyribonuclease HsdR K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] D Daro_1307 Restriction modification system DNA specificity domain K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] D Daro_1303 N-6 DNA methylase K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] D Daro_3449 N6 adenine-specific DNA methyltransferase, N12 class K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D Daro_3525 C-5 cytosine-specific DNA methylase K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D Daro_2534 PilT protein, N-terminal K07062 fitB; toxin FitB [EC:3.1.-.-] D Daro_3493 cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ D Daro_0116 rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins D Daro_1850 DNA topoisomerase IV subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D Daro_1867 DNA topoisomerase IV subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D Daro_1321 glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] D Daro_2020 hypothetical protein K19168 cptA; toxin CptA D Daro_2861 Protein of unknown function DUF339 K09159 cptB; antitoxin CptB D Daro_1515 Aminotransferase, class V:Aromatic amino acid beta-eliminating lyase/threonine aldolase K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1950 cysteine desulfurase IscS K04487 iscS; cysteine desulfurase [EC:2.8.1.7] D Daro_1949 Aminotransferase, class V K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C 04030 G protein-coupled receptors C 04050 Cytokine receptors C 04054 Pattern recognition receptors C 03310 Nuclear receptors C 04040 Ion channels C 04031 GTP-binding proteins C 04052 Cytokines and neuropeptides C 04515 Cell adhesion molecules C 04090 CD molecules [BR:dar04090] C 01504 Antimicrobial resistance genes [BR:dar01504] D Daro_2258 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Daro_2473 Heavy metal sensor kinase K07644 cusS; two-component system, OmpR family, heavy metal sensor histidine kinase CusS [EC:2.7.13.3] D Daro_2259 two component heavy metal response transcriptional regulator, winged helix family K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D Daro_2474 Heavy metal response regulator K07665 cusR; two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR D Daro_2160 Secretion protein HlyD K03585 acrA; membrane fusion protein, multidrug efflux system D Daro_2161 Hydrophobe/amphiphile efflux-1 HAE1 K18138 acrB; multidrug efflux pump D Daro_2162 RND efflux system, outer membrane lipoprotein, NodT K18139 oprM; outer membrane protein, multidrug efflux system D Daro_3760 Secretion protein HlyD K18302 mexJ; membrane fusion protein, multidrug efflux system D Daro_3761 Acriflavin resistance protein K18303 mexK; multidrug efflux pump D Daro_3926 Type I secretion outer membrane protein, TolC K12340 tolC; outer membrane protein D Daro_1165 Outer membrane efflux protein K12340 tolC; outer membrane protein D Daro_3831 transcriptional regulator, LysR family K18900 bpeT; LysR family transcriptional regulator, regulator for bpeEF and oprC D Daro_3829 Secretion protein HlyD K18901 bpeE; membrane fusion protein, multidrug efflux system D Daro_3828 Hydrophobe/amphiphile efflux-1 HAE1 K18902 bpeF; multidrug efflux pump D Daro_3827 RND efflux system, outer membrane lipoprotein, NodT K18903 oprC; outer membrane protein, multidrug efflux system C 00535 Proteoglycans C 00536 Glycosaminoglycan binding proteins C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:dar00537] D Daro_3229 Alkaline phosphatase K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1] C 04091 Lectins C 04990 Domain-containing proteins not elsewhere classified B B 09185 Viral protein families C 03200 Viral proteins C 03210 Viral fusion proteins B B 09184 RNA family C 03100 Non-coding RNAs [BR:dar03100] D Daro_R0047 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0050 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0015 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0004 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0041 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0029 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0020 tRNA-Ala K14218 tRNA-Ala; tRNA Ala D Daro_R0064 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0033 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0078 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0055 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0056 tRNA-Arg K14219 tRNA-Arg; tRNA Arg D Daro_R0036 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Daro_R0058 tRNA-Asn K14220 tRNA-Asn; tRNA Asn D Daro_R0045 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Daro_R0063 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Daro_R0048 tRNA-Asp K14221 tRNA-Asp; tRNA Asp D Daro_R0060 tRNA-Cys K14222 tRNA-Cys; tRNA Cys D Daro_R0077 tRNA-Gln K14223 tRNA-Gln; tRNA Gln D Daro_R0046 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Daro_R0049 tRNA-Glu K14224 tRNA-Glu; tRNA Glu D Daro_R0011 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0037 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0038 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0061 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0059 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0001 tRNA-Gly K14225 tRNA-Gly; tRNA Gly D Daro_R0054 tRNA-His K14226 tRNA-His; tRNA His D Daro_R0003 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Daro_R0028 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Daro_R0040 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Daro_R0019 tRNA-Ile K14227 tRNA-Ile; tRNA Ile D Daro_R0074 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0075 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0069 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0073 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0072 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0062 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0035 tRNA-Leu K14228 tRNA-Leu; tRNA Leu D Daro_R0008 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Daro_R0009 tRNA-Lys K14229 tRNA-Lys; tRNA Lys D Daro_R0017 tRNA-Met K14230 tRNA-Met; tRNA Met D Daro_R0076 tRNA-Met K14230 tRNA-Met; tRNA Met D Daro_R0007 tRNA-Met K14230 tRNA-Met; tRNA Met D Daro_R0026 tRNA-Met K14230 tRNA-Met; tRNA Met D Daro_R0014 tRNA-Phe K14231 tRNA-Phe; tRNA Phe D Daro_R0067 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Daro_R0023 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Daro_R0065 tRNA-Pro K14232 tRNA-Pro; tRNA Pro D Daro_R0066 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Daro_R0034 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Daro_R0052 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Daro_R0044 tRNA-Ser K14233 tRNA-Ser; tRNA Ser D Daro_R0012 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Daro_R0071 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Daro_R0024 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Daro_R0025 tRNA-Thr K14234 tRNA-Thr; tRNA Thr D Daro_R0013 tRNA-Trp K14235 tRNA-Trp; tRNA Trp D Daro_R0010 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr D Daro_R0053 tRNA-Val K14237 tRNA-Val; tRNA Val D Daro_R0068 tRNA-Val K14237 tRNA-Val; tRNA Val D Daro_R0051 tRNA-Val K14237 tRNA-Val; tRNA Val D Daro_R0070 tRNA-Val K14237 tRNA-Val; tRNA Val D Daro_R0057 tRNA-Sec K14238 tRNA-Sec; tRNA Sec D Daro_R0002 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0027 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0039 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0018 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA D Daro_R0005 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0021 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0030 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0042 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA D Daro_R0006 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0031 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0022 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0043 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA D Daro_R0032 SRP RNA, RNA component of signal recognition particle K01983 ffs; SRP RNA D Daro_R0016 RNA component of RNaseP K01978 rnpB; M1 RNA D Daro_R0079 Daro_R0079 K15035 ssrA; transfer-messenger RNA # A09190 Not Included in Pathway or Brite B B 09191 Unclassified: metabolism C 99980 Enzymes with EC numbers D Daro_3700 Dehydrogenase, E1 component K21416 acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha [EC:1.1.1.-] D Daro_3701 Transketolase, central region:Transketolase, C-terminal K21417 acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta [EC:1.1.1.-] D Daro_2761 Aldo/keto reductase K23107 yajO; 1-deoxyxylulose-5-phosphate synthase [EC:1.1.-.-] D Daro_0446 4Fe-4S ferredoxin, iron-sulfur binding protein:Thiamine pyrophosphate enzyme, C-terminal TPP-binding protein K00179 iorA; indolepyruvate ferredoxin oxidoreductase, alpha subunit [EC:1.2.7.8] D Daro_0447 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 iorB; indolepyruvate ferredoxin oxidoreductase, beta subunit [EC:1.2.7.8] D Daro_0267 Pyruvate ferredoxin/flavodoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D Daro_2777 putative pyruvate ferredoxin/flavodoxin oxidoreductase K04090 E1.2.7.8; indolepyruvate ferredoxin oxidoreductase [EC:1.2.7.8] D Daro_1700 Coenzyme PQQ biosynthesis protein C K06137 pqqC; pyrroloquinoline-quinone synthase [EC:1.3.3.11] D Daro_1891 Ferredoxin:(2Fe-2S)-binding protein K07302 iorA; isoquinoline 1-oxidoreductase subunit alpha [EC:1.3.99.16] D Daro_1892 Twin-arginine translocation pathway signal K07303 iorB; isoquinoline 1-oxidoreductase subunit beta [EC:1.3.99.16] D Daro_1936 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D Daro_0228 FAD dependent oxidoreductase:Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 ETFDH; electron-transferring-flavoprotein dehydrogenase [EC:1.5.5.1] D Daro_1451 Beta-lactamase-like:Flavodoxin/nitric oxide synthase K22405 fprA1_2; NADH oxidase (H2O-forming) [EC:1.6.3.4] D Daro_3833 Zinc-containing alcohol dehydrogenase superfamily K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Daro_0548 Zinc-containing alcohol dehydrogenase superfamily K00344 qor; NADPH:quinone reductase [EC:1.6.5.5] D Daro_1391 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase K01118 acpD; FMN-dependent NADH-azoreductase [EC:1.7.1.17] D Daro_3518 FAD-dependent pyridine nucleotide-disulfide oxidoreductase:Pyridine nucleotide-disulfide oxidoreductase, class-II, active site K03387 ahpF; NADH-dependent peroxiredoxin subunit F [EC:1.8.1.-] D Daro_2492 Cytochrome c, class I K19713 tsdA; thiosulfate dehydrogenase [EC:1.8.2.2] D Daro_3532 Methionine sulfoxide reductase A K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] D Daro_1889 Methionine sulfoxide reductase B K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] D Daro_0621 Twin-arginine translocation pathway signal K07147 msrP; methionine sulfoxide reductase catalytic subunit [EC:1.8.-.-] D Daro_1223 Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Daro_2362 Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Daro_0532 thiol peroxidase (atypical 2-Cys peroxiredoxin) K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24] D Daro_3517 Alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen K24119 ahpC; NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] D Daro_2067 OsmC-like protein K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28] D Daro_0982 NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit K00436 hoxH; NAD-reducing hydrogenase large subunit [EC:1.12.1.2] D Daro_0979 NAD(P)-dependent nickel-iron dehydrogenase flavin-containing subunit K18005 hoxF; [NiFe] hydrogenase diaphorase moiety large subunit [EC:1.12.1.2] D Daro_0980 Ferredoxin K18006 hoxU; [NiFe] hydrogenase diaphorase moiety small subunit [EC:1.12.1.2] D Daro_0981 NADH ubiquinone oxidoreductase, 20 kDa subunit K18007 hoxY; NAD-reducing hydrogenase small subunit [EC:1.12.1.2] D Daro_0553 Pirin, N-terminal K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Daro_1390 Pirin, N-terminal:Pirin, C-terminal K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24] D Daro_2580 Chlorite dismutase K09162 cld; chlorite dismutase [EC:1.13.11.49] D Daro_2707 Amine oxidase K21677 hpnE; hydroxysqualene dehydroxylase [EC:1.17.8.1] D Daro_1536 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Daro_3266 Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region K00528 fpr; ferredoxin/flavodoxin---NADP+ reductase [EC:1.18.1.2 1.19.1.1] D Daro_3678 hypothetical protein K18917 mrx1; mycoredoxin [EC:1.20.4.3] D Daro_2640 Low molecular weight phosphotyrosine protein phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Daro_2639 Low molecular weight phosphotyrosine protein phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Daro_0699 Low molecular weight phosphotyrosine protein phosphatase K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4] D Daro_1702 Coenzyme PQQ biosynthesis protein E K06139 pqqE; PqqA peptide cyclase [EC:1.21.98.4] D Daro_0409 Radical SAM K06937 E1.21.98.5; tetraether lipid synthase [EC:1.21.98.5] D Daro_2097 Radical SAM K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Daro_1969 Radical SAM K04069 pflA; pyruvate formate lyase activating enzyme [EC:1.97.1.4] D Daro_2523 Protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Daro_3924 Protein-L-isoaspartate(D-aspartate) O-methyltransferase:O-methyltransferase, family 3 K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] D Daro_0492 cyclopropane-fatty-acyl-phospholipid synthase K00574 cfa; cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79] D Daro_0191 GCN5-related N-acetyltransferase K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57] D Daro_3531 Apolipoprotein N-acyltransferase K03820 lnt; apolipoprotein N-acyltransferase [EC:2.3.1.269] D Daro_3437 GCN5-related N-acetyltransferase K03824 yhbS; putative acetyltransferase [EC:2.3.1.-] D Daro_1196 Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6] D Daro_2519 Transglutaminase-like protein K22452 tgpA; protein-glutamine gamma-glutamyltransferase [EC:2.3.2.13] D Daro_1195 Arginine-tRNA-protein transferase, N-terminal:Arginine-tRNA-protein transferase, C-terminal K21420 bpt; leucyl-tRNA---protein transferase [EC:2.3.2.29] D Daro_2410 Glycosyl transferase, group 1 K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-] D Daro_1416 hypothetical protein K05951 draT; NAD+---dinitrogen-reductase ADP-D-ribosyltransferase [EC:2.4.2.37] D Daro_4015 Triphosphoribosyl-dephospho-CoA protein K13930 mdcB; triphosphoribosyl-dephospho-CoA synthase [EC:2.4.2.52] D Daro_1475 Putative molybdenum utilization protein ModD K03813 modD; molybdenum transport protein [EC:2.4.2.-] D Daro_0301 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Daro_0407 Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145] D Daro_0009 ApbE-like lipoprotein K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180] D Daro_1758 Protein of unknown function DUF299 K09773 ppsR; [pyruvate, water dikinase]-phosphate phosphotransferase / [pyruvate, water dikinase] kinase [EC:2.7.4.28 2.7.11.33] D Daro_3585 Polyphosphate:AMP phosphotransferase K23753 ppk2; AMP-polyphosphate phosphotransferase [EC:2.7.4.33] D Daro_3331 Glutamate-ammonia ligase adenylyltransferase K00982 glnE; [glutamine synthetase] adenylyltransferase / [glutamine synthetase]-adenylyl-L-tyrosine phosphorylase [EC:2.7.7.42 2.7.7.89] D Daro_0690 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Daro_2250 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Daro_3822 RNA-directed DNA polymerase (Reverse transcriptase) K00986 ltrA; RNA-directed DNA polymerase [EC:2.7.7.49] D Daro_4016 malonate decarboxylase K13934 mdcG; phosphoribosyl-dephospho-CoA transferase [EC:2.7.7.66] D Daro_4038 Protein of unknown function UPF0061 K08997 SELENOO; protein adenylyltransferase [EC:2.7.7.108] D Daro_3121 Isocitrate dehydrogenase kinasephosphatase K00906 aceK; isocitrate dehydrogenase kinase/phosphatase [EC:2.7.11.5 3.1.3.-] D Daro_4146 Hpr(Ser) kinase/phosphatase K06023 hprK; HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] D Daro_3113 L-carnitine dehydratase/bile acid-inducible protein F K07749 frc; formyl-CoA transferase [EC:2.8.3.16] D Daro_1174 conserved hypothetical protein K03928 yvaK; carboxylesterase [EC:3.1.1.1] D Daro_1928 Appr-1-p processing K23518 MACROD; O-acetyl-ADP-ribose deacetylase [EC:3.1.1.106] D Daro_1937 Thioesterase superfamily K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Daro_4057 4-hydroxybenzoyl-CoA thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-] D Daro_2462 PHP, C-terminal K07053 E3.1.3.97; 3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97] D Daro_0433 phosphohistidine phosphatase, SixA K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-] D Daro_3553 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Daro_3285 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Daro_0007 response regulator receiver modulated metal dependent phosphohydrolase K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Daro_3005 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Daro_3458 Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain K07814 K07814; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Daro_0187 HDIG protein K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Daro_0063 Metal-dependent phosphohydrolase, HD subdomain K25135 K25135; cyclic di-GMP phosphodiesterase [EC:3.1.4.-] D Daro_2194 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Daro_2208 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Daro_3841 TatD-related deoxyribonuclease K03424 tatD; TatD DNase family protein [EC:3.1.21.-] D Daro_1447 ADP-ribosylation/Crystallin J1 K05521 draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24] D Daro_2132 Formylmethionine deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Daro_0021 peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88] D Daro_1249 LmbE-like protein K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-] D Daro_2011 Maf-like protein K25422 yceF; 7-methyl-GTP pyrophosphatase [EC:3.6.1.-] D Daro_2517 ATPase associated with various cellular activities, AAA_3:ATPase associated with various cellular activities, AAA_5 K03924 moxR; MoxR-like ATPase [EC:3.6.3.-] D Daro_2133 Protein of unknown function DUF1234 K07002 RBBP9; serine hydrolase [EC:3.-.-.-] D Daro_4018 beta subunit of malonate decarboxylase K13932 mdcD; malonate decarboxylase beta subunit [EC:4.1.1.87] D Daro_4017 Malonate decarboxylase gamma subunit K13933 mdcE; malonate decarboxylase gamma subunit [EC:4.1.1.87] D Daro_2379 Protein of unknown function UPF0031:YjeF-related protein, N-terminal K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6] D Daro_0243 Methylmalonyl-CoA mutase, N-terminal:Methylmalonyl-CoA mutase, C-terminal K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13] D Daro_3240 trans-feruloyl-CoA synthase K12508 fcs; feruloyl-CoA synthase [EC:6.2.1.34] D Daro_3264 Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Daro_3265 Cyanophycin synthetase K03802 cphA; cyanophycin synthetase [EC:6.3.2.29 6.3.2.30] D Daro_3942 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45] D Daro_1019 acetone carboxylase, alpha subunit K10854 acxB; acetone carboxylase, alpha subunit [EC:6.4.1.6] D Daro_1018 acetone carboxylase, beta subunit K10855 acxA; acetone carboxylase, beta subunit [EC:6.4.1.6] D Daro_1020 acetone carboxylase, gamma subunit K10856 acxC; acetone carboxylase, gamma subunit [EC:6.4.1.6] D Daro_1235 ATP dependent DNA ligase, central K26441 lig; DNA ligase [EC:6.5.1.1] D Daro_1160 Electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Daro_1495 Electron transport complex, RnfABCDGE type, D subunit K03614 rnfD; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit D [EC:7.1.1.11 7.2.1.2] D Daro_1161 Electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Daro_1494 Electron transport complex, RnfABCDGE type, C subunit K03615 rnfC; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit C [EC:7.1.1.11 7.2.1.2] D Daro_1162 Electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Daro_1493 Electron transport complex, RnfABCDGE type, B subunit K03616 rnfB; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit B [EC:7.1.1.11 7.2.1.2] D Daro_0711 ATPase, E1-E2 type:Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase K01533 copB; P-type Cu2+ transporter [EC:7.2.2.9] D Daro_2257 ATPase, E1-E2 type:Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D Daro_2631 ATPase, E1-E2 type:Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21] D Daro_2078 ATPase, E1-E2 type:Magnesium-translocating P-type ATPase K01531 mgtA; P-type Mg2+ transporter [EC:7.2.2.14] C 99981 Carbohydrate metabolism D Daro_0669 Protein of unknown function DUF224, cysteine-rich region K18928 lldE; L-lactate dehydrogenase complex protein LldE D Daro_1766 Protein of unknown function DUF224, cysteine-rich region K18928 lldE; L-lactate dehydrogenase complex protein LldE D Daro_1764 Iron-sulfur cluster binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D Daro_0670 4Fe-4S ferredoxin, iron-sulfur binding protein K18929 lldF; L-lactate dehydrogenase complex protein LldF D Daro_0673 Protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG D Daro_1765 Protein of unknown function DUF162 K00782 lldG; L-lactate dehydrogenase complex protein LldG C 99982 Energy metabolism D Daro_1955 Ferredoxin, 2Fe-2S type K04755 fdx; ferredoxin, 2Fe-2S D Daro_1159 Electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Daro_1489 Electron transport complex, RnfABCDGE type, G subunit K03612 rnfG; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit G D Daro_1158 Electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Daro_1490 Electron transport complex, RnfABCDGE type, E subunit K03613 rnfE; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit E D Daro_1163 Electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Daro_1492 Electron transport complex, RnfABCDGE type, A subunit K03617 rnfA; H+/Na+-translocating ferredoxin:NAD+ oxidoreductase subunit A D Daro_1951 FeS cluster assembly scaffold IscU K04488 iscU; nitrogen fixation protein NifU and related proteins D Daro_1514 Fe-S cluster assembly protein NifU K13819 K13819; NifU-like protein D Daro_1448 NifQ K15790 nifQ; nitrogen fixation protein NifQ D Daro_3197 von Willebrand factor, type A K02448 norD; nitric oxide reductase NorD protein D Daro_3192 putative additional subunit of nitric oxide reductase (Nor) complex, membrane protein K02164 norE; nitric oxide reductase NorE protein D Daro_3194 ATPase associated with various cellular activities, AAA_5 K04748 norQ; nitric oxide reductase NorQ protein D Daro_3516 periplasmic nitrate reductase chaperone NapD K02570 napD; periplasmic nitrate reductase NapD D Daro_4000 periplasmic nitrate reductase maturation protein NapF K02572 napF; ferredoxin-type protein NapF D Daro_1506 Dinitrogenase iron-molybdenum cofactor biosynthesis K02596 nifX; nitrogen fixation protein NifX D Daro_1410 Dinitrogenase iron-molybdenum cofactor biosynthesis K02596 nifX; nitrogen fixation protein NifX D Daro_1412 NifT/FixU K02593 nifT; nitrogen fixation protein NifT D Daro_1394 NifZ K02597 nifZ; nitrogen fixation protein NifZ D Daro_1484 hypothetical protein K02597 nifZ; nitrogen fixation protein NifZ D Daro_1454 Nitrogenase cofactor biosynthesis protein NifB K02585 nifB; nitrogen fixation protein NifB D Daro_1505 Nitrogenase molybdenum-iron cofactor biosynthesis protein K02592 nifN; nitrogenase molybdenum-iron protein NifN D Daro_1501 Nitrogenase MoFe cofactor biosynthesis protein NifE K02587 nifE; nitrogenase molybdenum-cofactor synthesis protein NifE D Daro_1483 Flavodoxin, long chain K03839 fldA; flavodoxin I D Daro_1457 Flavodoxin, long chain K03839 fldA; flavodoxin I D Daro_2579 NapC/NirT cytochrome c, N-terminal K02569 napC; cytochrome c-type protein NapC D Daro_3513 periplasmic nitrate reductase subunit NapC K02569 napC; cytochrome c-type protein NapC D Daro_1582 NapC/NirT cytochrome c, N-terminal K02569 napC; cytochrome c-type protein NapC D Daro_3839 periplasmic nitrate reductase subunit NapG K02573 napG; ferredoxin-type protein NapG D Daro_1566 4Fe-4S ferredoxin, iron-sulfur binding protein K02573 napG; ferredoxin-type protein NapG D Daro_3838 periplasmic nitrate reductase subunit NapH K02574 napH; ferredoxin-type protein NapH D Daro_1565 Ferredoxin-type protein, NapH/MauN family K02574 napH; ferredoxin-type protein NapH D Daro_2955 4Fe-4S ferredoxin, iron-sulfur binding protein K02574 napH; ferredoxin-type protein NapH D Daro_1211 Electron transfer flavoprotein beta-subunit K03521 fixA; electron transfer flavoprotein beta subunit D Daro_1395 Nitrogen fixation protein NifW K02595 nifW; nitrogenase-stabilizing/protective protein D Daro_3271 hypothetical protein K19344 nirC; cytochrome c55X D Daro_3270 Cytochrome d1, heme region K19345 nirF; protein NirF D Daro_1088 conserved hypothetical protein K21694 cowN; N(2)-fixation sustaining protein CowN C 99983 Lipid metabolism C 99984 Nucleotide metabolism C 99985 Amino acid metabolism D Daro_3425 conserved hypothetical protein K06203 cysZ; CysZ protein D Daro_3884 Protein of unknown function UPF0001 K06997 yggS; PLP dependent protein C 99986 Glycan metabolism D Daro_1282 putative membrane protein K08992 lapA; lipopolysaccharide assembly protein A D Daro_1283 TPR repeat K19804 lapB; lipopolysaccharide assembly protein B C 99987 Cofactor metabolism D Daro_3671 HemY, N-terminal K02498 hemY; HemY protein D Daro_3261 Radical SAM K24868 nirJ; heme d1 biosynthesis protein D Daro_3869 2-octaprenylphenol hydroxylase K03688 ubiB; ubiquinone biosynthesis protein D Daro_4116 Protein of unknown function DUF1243 K03690 ubiJ; ubiquinone biosynthesis accessory factor UbiJ D Daro_0051 Protein of unknown function DUF526 K09806 ubiK; ubiquinone biosynthesis accessory factor UbiK D Daro_0107 conserved hypothetical protein K24843 ubiT; O2-independent ubiquinone biosynthesis accessory factor UbiT D Daro_1782 molybdopterin guanine dinucleotide biosynthesis accessory protein MobB K03753 mobB; molybdopterin-guanine dinucleotide biosynthesis adapter protein C 99988 Secondary metabolism D Daro_2797 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) D Daro_2073 NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone) C 99999 Others D Daro_3258 Phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase D Daro_2128 Phospholipase/Carboxylesterase K06999 K06999; phospholipase/carboxylesterase D Daro_2718 GCN5-related N-acetyltransferase:CoA-binding protein K09181 yfiQ; acetyltransferase B B 09192 Unclassified: genetic information processing C 99973 Transcription D Daro_1388 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Daro_3093 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Daro_3392 cold-shock DNA-binding protein family K03704 cspA; cold shock protein D Daro_0053 nitrogen regulatory protein P-II K04752 glnK; nitrogen regulatory protein P-II 2 D Daro_2744 RNA binding S1 K06959 tex; protein Tex C 99974 Translation D Daro_0987 ABC-2:ABC transporter related protein K13926 rbbA; ribosome-dependent ATPase D Daro_0992 Beta-lactamase-like:RNA-metabolising metallo-beta-lactamase K07576 K07576; metallo-beta-lactamase family protein C 99975 Protein processing D Daro_3094 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS D Daro_1719 Trigger factor K03545 tig; trigger factor D Daro_0620 Protein of unknown function UPF0191 K17247 msrQ; methionine sulfoxide reductase heme-binding subunit D Daro_1815 Formate dehydrogenase accessory protein K02380 fdhE; FdhE protein D Daro_1426 UreE urease accessory, N-terminal:UreE urease accessory, C-terminal K03187 ureE; urease accessory protein D Daro_1425 Urease accessory protein UreF K03188 ureF; urease accessory protein D Daro_1424 Urease accessory protein UreG K03189 ureG; urease accessory protein D Daro_1430 Urease accessory protein UreD K03190 ureD; urease accessory protein D Daro_2342 SsrA-binding protein K03664 smpB; SsrA-binding protein D Daro_3967 Hydrogenase expression/formation protein (HUPF/HYPC) K04653 hypC; hydrogenase expression/formation protein HypC D Daro_3985 Hydrogenase expression/formation protein (HUPF/HYPC) K04653 hypC; hydrogenase expression/formation protein HypC D Daro_3969 Hydrogenase expression/formation protein (HUPF/HYPC) K04653 hypC; hydrogenase expression/formation protein HypC D Daro_3966 Hydrogenase formation HypD protein K04654 hypD; hydrogenase expression/formation protein HypD D Daro_3965 Hydrogenase expression/formation protein HypE K04655 hypE; hydrogenase expression/formation protein HypE D Daro_3977 Hydrogenase maturation protein HypF K04656 hypF; hydrogenase maturation protein HypF D Daro_0050 Mg chelatase-related protein K07391 comM; magnesium chelatase family protein D Daro_0648 OsmC-like protein K07397 yhfA; putative redox protein D Daro_1893 Protein of unknown function DUF182 K07402 xdhC; xanthine dehydrogenase accessory factor C 99976 Replication and repair D Daro_3142 DNA replication and repair protein RadC K03630 radC; DNA repair protein RadC D Daro_2555 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Daro_2231 DNA repair protein RadC K03630 radC; DNA repair protein RadC D Daro_1600 Protein of unknown function DUF195 K09760 rmuC; DNA recombination protein RmuC D Daro_2559 conserved hypothetical protein K07459 ybjD; putative ATP-dependent endonuclease of the OLD family D Daro_0503 Protein of unknown function UPF0102 K07460 yraN; putative endonuclease D Daro_2472 Excinuclease ABC, C subunit, N-terminal K07461 K07461; putative endonuclease D Daro_0019 DNA protecting protein DprA K04096 smf; DNA processing protein D Daro_1298 Recombination protein MgsA K07478 ycaJ; putative ATPase D Daro_3652 Resolvase, N-terminal K14060 pinR; putative DNA-invertase from lambdoid prophage Rac D Daro_2694 conserved hypothetical protein K06919 K06919; putative DNA primase/helicase D Daro_2573 conserved hypothetical protein K06919 K06919; putative DNA primase/helicase D Daro_2291 conserved hypothetical protein K06919 K06919; putative DNA primase/helicase D Daro_1288 propable PolB K07501 K07501; 3'-5' exonuclease D Daro_1306 Transposase IS3/IS911 K07483 K07483; transposase D Daro_1654 Transposase IS3/IS911 K07483 K07483; transposase D Daro_1712 Transposase IS3/IS911 K07483 K07483; transposase D Daro_2284 Transposase IS3/IS911 K07483 K07483; transposase D Daro_1372 Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902 K07486 K07486; transposase D Daro_2041 Transposase IS116/IS110/IS902 K07486 K07486; transposase D Daro_3434 Transposase IS116/IS110/IS902 K07486 K07486; transposase D Daro_2425 Integrase, catalytic region K07497 K07497; putative transposase D Daro_2424 Transposase IS3/IS911 K07497 K07497; putative transposase D Daro_1305 Integrase, catalytic region K07497 K07497; putative transposase D Daro_2285 Integrase, catalytic region K07497 K07497; putative transposase D Daro_1711 Integrase, catalytic region K07497 K07497; putative transposase D Daro_1653 Integrase, catalytic region K07497 K07497; putative transposase D Daro_1324 Phage integrase K14059 int; integrase C 99979 Viral proteins C 99998 Others D Daro_0807 Conserved hypothetical protein 103 K09747 ebfC; nucleoid-associated protein EbfC B B 09193 Unclassified: signaling and cellular processes C 99977 Transport D Daro_2958 Acriflavin resistance protein K03296 TC.HAE1; hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family D Daro_1123 Phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Daro_0679 Phosphate transporter K03306 TC.PIT; inorganic phosphate transporter, PiT family D Daro_4155 Na+/solute symporter K03307 TC.SSS; solute:Na+ symporter, SSS family C 99978 Cell growth D Daro_2903 Intracellular septation protein A K06190 ispZ; intracellular septation protein D Daro_1995 anti-anti-sigma regulatory factor, SpoIIAA K06378 spoIIAA; stage II sporulation protein AA (anti-sigma F factor antagonist) D Daro_0609 Peptidase M23B K22719 envC; murein hydrolase activator C 99993 Cell motility D Daro_0968 MglA protein K24105 mglA; mutual gliding-motility protein MglA C 99995 Signaling proteins D Daro_0182 ProQ activator of osmoprotectant transporter ProP K03607 proQ; ProP effector D Daro_2095 Carbon starvation protein CstA K06200 cstA; carbon starvation protein D Daro_1998 Small GTP-binding protein domain:GTP-binding protein TypA K06207 typA; GTP-binding protein D Daro_4192 CBS:HPP protein K07168 K07168; CBS domain-containing membrane protein D Daro_3528 PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins D Daro_1222 PhoH-like protein K07175 phoH2; PhoH-like ATPase D Daro_1635 Cyclic nucleotide-binding:CBS:Protein of unknown function DUF294, nucleotidyltransferase putative K07182 K07182; CBS domain-containing protein D Daro_1634 Protein of unknown function DUF294, nucleotidyltransferase putative K07182 K07182; CBS domain-containing protein D Daro_3028 Protein of unknown function DUF520 K09767 yajQ; cyclic-di-GMP-binding protein D Daro_1488 PAS protein K23916 nifL; nitrogen fixation regulatory protein C 99992 Structural proteins D Daro_1296 Outer membrane lipoprotein carrier protein LolA K03634 lolA; outer membrane lipoprotein carrier protein D Daro_3728 Outer membrane lipoprotein LolB K02494 lolB; outer membrane lipoprotein LolB D Daro_3399 VacJ-like lipoprotein K04754 mlaA; phospholipid-binding lipoprotein MlaA D Daro_1751 Outer membrane chaperone Skp (OmpH) K06142 hlpA; outer membrane protein D Daro_2522 Peptidoglycan-binding LysM:Peptidase M23B K06194 nlpD; lipoprotein NlpD D Daro_0261 Protein of unknown function DUF107 K07340 ybbJ; inner membrane protein D Daro_0986 Secretion protein HlyD K01993 ABC-2.TX; HlyD family secretion protein D Daro_1166 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein D Daro_3461 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein D Daro_3918 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein D Daro_1673 Secretion protein HlyD K02005 ABC.CD.TX; HlyD family secretion protein D Daro_2087 osmotically inducible lipoprotein K04062 osmB; osmotically inducible lipoprotein OsmB D Daro_3179 Inner membrane CreD K06143 creD; inner membrane protein D Daro_3995 CcmE/CycJ protein K02197 ccmE; cytochrome c-type biogenesis protein CcmE D Daro_1405 TPR repeat K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Daro_3998 Cytochrome C biogenesis protein K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Daro_3772 TPR repeat K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Daro_3999 TPR repeat K02200 ccmH; cytochrome c-type biogenesis protein CcmH D Daro_2986 conserved hypothetical protein K15539 rodZ; cytoskeleton protein RodZ C 99994 Others D Daro_3566 phosphate uptake regulator, PhoU K02039 phoU; phosphate transport system protein D Daro_1058 BFD-like (2Fe-2S)-binding region K02192 bfd; bacterioferritin-associated ferredoxin D Daro_4166 CutA1 divalent ion tolerance protein K03926 cutA; periplasmic divalent cation tolerance protein D Daro_3484 Protein of unknown function DUF525 K06195 apaG; ApaG protein D Daro_0208 Frataxin-like protein K06202 cyaY; iron-sulfur cluster assembly protein CyaY D Daro_1617 Hemerythrin HHE cation binding region K07216 hr; hemerythrin D Daro_3696 Hemerythrin HHE cation binding region K07216 hr; hemerythrin D Daro_2762 Hemerythrin HHE cation binding region K07216 hr; hemerythrin D Daro_2683 Hemerythrin HHE cation binding region K07216 hr; hemerythrin D Daro_1333 Hemerythrin HHE cation binding region K07216 hr; hemerythrin D Daro_1406 Hemerythrin K07216 hr; hemerythrin D Daro_1420 conserved hypothetical protein K07216 hr; hemerythrin D Daro_1660 Hemerythrin HHE cation binding region K07216 hr; hemerythrin D Daro_1670 hypothetical protein K07216 hr; hemerythrin D Daro_2268 hemerythrin-related protein K07216 hr; hemerythrin D Daro_1567 Periplasmic copper-binding protein K07218 nosD; nitrous oxidase accessory protein D Daro_2908 Periplasmic copper-binding protein K07218 nosD; nitrous oxidase accessory protein D Daro_2874 NnrS K07234 K07234; uncharacterized protein involved in response to NO D Daro_1821 DsrE-like protein K06039 ychN; uncharacterized protein involved in oxidation of intracellular sulfur D Daro_1829 putative lipoprotein involved in nitrous oxide reduction K19342 nosL; copper chaperone NosL D Daro_1835 hypothetical protein K19342 nosL; copper chaperone NosL B B 09194 Poorly characterized C 99996 General function prediction only D Daro_0875 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production D Daro_0385 Phenylacetic acid degradation protein PaaY K02617 paaY; phenylacetic acid degradation protein D Daro_1805 Transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein D Daro_2052 Transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein D Daro_2076 Transport-associated protein K04065 osmY; hyperosmotically inducible periplasmic protein D Daro_1699 Coenzyme PQQ biosynthesis protein B K06136 pqqB; pyrroloquinoline quinone biosynthesis protein B D Daro_1701 Coenzyme PQQ synthesis D K06138 pqqD; pyrroloquinoline quinone biosynthesis protein D D Daro_1997 Protozoan/cyanobacterial globin K06886 glbN; hemoglobin D Daro_1864 Patatin K07001 K07001; NTE family protein D Daro_1858 Patatin K07001 K07001; NTE family protein D Daro_1906 Patatin K07001 K07001; NTE family protein D Daro_0465 Patatin K07001 K07001; NTE family protein D Daro_0853 Patatin K07001 K07001; NTE family protein D Daro_0628 HAD-superfamily hydrolase subfamily IA, variant 3:Pyrimidine 5-nucleotidase K07025 K07025; putative hydrolase of the HAD superfamily D Daro_0653 HesB/YadR/YfhF K15724 erpA; iron-sulfur cluster insertion protein D Daro_3068 tRNA-processing RNAse BN K07058 K07058; membrane protein D Daro_1190 LemA K03744 lemA; LemA protein D Daro_2678 SlyX K03745 slyX; SlyX protein D Daro_1905 CreA K05805 creA; CreA protein D Daro_0874 Sporulation related protein K03749 dedD; DedD protein D Daro_3163 DedA K03975 dedA; membrane-associated protein D Daro_0185 Membrane protein of unknown function K08972 K08972; putative membrane protein D Daro_1075 Membrane protein of unknown function K08972 K08972; putative membrane protein D Daro_0912 conserved hypothetical protein K08984 yjdF; putative membrane protein D Daro_0278 putative membrane protein K08985 K08985; putative lipoprotein D Daro_3753 Protein of unknown function DUF350 K08989 K08989; putative membrane protein D Daro_3857 SEC-C motif protein K09858 K09858; SEC-C motif domain protein D Daro_1194 Uncharacterized protein conserved in bacteria K09914 K09914; putative lipoprotein D Daro_2846 conserved hypothetical protein K11312 K11312; cupin 2 domain-containing protein D Daro_3983 HupH hydrogenase expression protein, C-terminal conserved region K03618 hyaF; hydrogenase-1 operon protein HyaF D Daro_3984 Hydrogenase-1 expression HyaE K03619 hyaE; hydrogenase-1 operon protein HyaE D Daro_0570 PhnA protein K06193 phnA; protein PhnA C 99997 Function unknown D Daro_1423 Ankyrin K06867 K06867; uncharacterized protein D Daro_2193 Ankyrin K06867 K06867; uncharacterized protein D Daro_3110 Ankyrin K06867 K06867; uncharacterized protein D Daro_1183 Ankyrin K06867 K06867; uncharacterized protein D Daro_1199 Ankyrin K06867 K06867; uncharacterized protein D Daro_0417 Radical SAM K06871 K06871; uncharacterized protein D Daro_1189 Protein of unknown function DUF477 K06872 K06872; uncharacterized protein D Daro_2430 esterase/lipase/thioesterase family active site K06889 K06889; uncharacterized protein D Daro_3607 tail lysozyme, putative K06903 W; Bacteriophage baseplate protein W D Daro_3614 putative phage tail sheath protein FI K06907 FI; Bacteriophage tail sheath protein D Daro_3705 Protein of unknown function DUF815 K06923 K06923; uncharacterized protein D Daro_0084 Protein of unknown function DUF1289 K06938 K06938; uncharacterized protein D Daro_2884 Protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Daro_3013 Protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Daro_3912 Protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Daro_1958 Protein of unknown function UPF0153 K06940 K06940; uncharacterized protein D Daro_1094 Metal-dependent phosphohydrolase, HD subdomain K06950 K06950; uncharacterized protein D Daro_1102 Metal-dependent phosphohydrolase, HD subdomain K06950 K06950; uncharacterized protein D Daro_0660 conserved hypothetical protein K06950 K06950; uncharacterized protein D Daro_0490 Amine oxidase:FAD dependent oxidoreductase K06954 K06954; uncharacterized protein D Daro_0042 Protein of unknown function DUF861 K06995 K06995; uncharacterized protein D Daro_3438 Glyoxalase/bleomycin resistance protein/dioxygenase K06996 K06996; uncharacterized protein D Daro_3910 Protein of unknown function UPF0227 K07000 K07000; uncharacterized protein D Daro_1350 exporters of the RND superfamily K07003 K07003; uncharacterized protein D Daro_3778 conserved hypothetical protein, putative transport protein K07003 K07003; uncharacterized protein D Daro_1523 Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein K07006 K07006; uncharacterized protein D Daro_4159 conserved hypothetical protein K07018 K07018; uncharacterized protein D Daro_3298 esterase/lipase/thioesterase family active site K07019 K07019; uncharacterized protein D Daro_3011 Glyoxalase/bleomycin resistance protein/dioxygenase K07032 K07032; uncharacterized protein D Daro_0229 GPR1/FUN34/YaaH family protein K07034 K07034; uncharacterized protein D Daro_1895 YgfB and YecA K07039 K07039; uncharacterized protein D Daro_0404 Amidohydrolase 2 K07045 K07045; uncharacterized protein D Daro_3451 Protein of unknown function zinc binding 2 K07054 K07054; uncharacterized protein D Daro_0701 permease K07089 K07089; uncharacterized protein D Daro_2949 permease K07089 K07089; uncharacterized protein D Daro_2922 conserved hypothetical protein K07090 K07090; uncharacterized protein D Daro_2116 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Daro_3914 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Daro_0479 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Daro_2911 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Daro_1137 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Daro_4025 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Daro_4013 Protein of unknown function DUF81 K07090 K07090; uncharacterized protein D Daro_2679 Phosphoesterase, DHHA1 K07097 K07097; uncharacterized protein D Daro_3826 Metallophosphoesterase K07098 K07098; uncharacterized protein D Daro_4041 YeeE/YedE K07112 K07112; uncharacterized protein D Daro_2820 YeeE/YedE K07112 K07112; uncharacterized protein D Daro_2821 YeeE/YedE K07112 K07112; uncharacterized protein D Daro_3126 YeeE/YedE K07112 K07112; uncharacterized protein D Daro_4087 Sel1-like repeat K07126 K07126; uncharacterized protein D Daro_3016 FAD dependent oxidoreductase K07137 K07137; uncharacterized protein D Daro_0066 Peptidase S16, lon N-terminal K07157 K07157; uncharacterized protein D Daro_4202 Protein of unknown function DUF37 K08998 K08998; uncharacterized protein D Daro_2916 hypothetical protein K08998 K08998; uncharacterized protein D Daro_2493 Uncharacterized conserved protein K09004 K09004; uncharacterized protein D Daro_3253 Protein of unknown function DUF192 K09005 K09005; uncharacterized protein D Daro_0528 GatB/Yqey K09117 K09117; uncharacterized protein D Daro_3887 Conserved hypothetical protein 251 K09131 K09131; uncharacterized protein D Daro_1970 AMMECR1 protein K09141 K09141; uncharacterized protein D Daro_2334 conserved hypothetical protein K09144 K09144; uncharacterized protein D Daro_0289 Protein of unknown function DUF493 K09158 K09158; uncharacterized protein D Daro_2723 Protein of unknown function DUF1684 K09164 K09164; uncharacterized protein D Daro_2049 conserved hypothetical protein K09700 K09700; uncharacterized protein D Daro_0491 Protein of unknown function DUF1365 K09701 K09701; uncharacterized protein D Daro_2879 Protein of unknown function DUF188 K09768 K09768; uncharacterized protein D Daro_2904 YCII-related protein K09780 K09780; uncharacterized protein D Daro_1869 Protein of unknown function DUF808 K09781 K09781; uncharacterized protein D Daro_3207 Protein of unknown function DUF343 K09791 K09791; uncharacterized protein D Daro_1049 conserved hypothetical protein K09792 K09792; uncharacterized protein D Daro_1831 conserved hypothetical protein K09792 K09792; uncharacterized protein D Daro_0859 hypothetical protein K09794 K09794; uncharacterized protein D Daro_2340 Protein of unknown function UPF0125 K09801 K09801; uncharacterized protein D Daro_1496 Protein of unknown function UPF0125 K09801 K09801; uncharacterized protein D Daro_0565 conserved hypothetical protein K09822 K09822; uncharacterized protein D Daro_2893 Protein of unknown function DUF328 K09861 K09861; uncharacterized protein D Daro_3707 Protein of unknown function DUF329 K09862 K09862; uncharacterized protein D Daro_2469 Protein of unknown function DUF480 K09915 K09915; uncharacterized protein D Daro_0193 Protein of unknown function DUF484 K09921 K09921; uncharacterized protein D Daro_3184 Protein of unknown function DUF486 K09922 K09922; uncharacterized protein D Daro_0718 conserved hypothetical protein K09926 K09926; uncharacterized protein D Daro_2833 conserved hypothetical protein K09928 K09928; uncharacterized protein D Daro_3154 conserved hypothetical protein K09929 K09929; uncharacterized protein D Daro_3153 Protein of unknown function DUF692 K09930 K09930; uncharacterized protein D Daro_2976 conserved hypothetical protein K09937 K09937; uncharacterized protein D Daro_2963 Protein of unknown function DUF1415 K09941 K09941; uncharacterized protein D Daro_1179 conserved hypothetical transmembrane protein K09945 K09945; uncharacterized protein D Daro_3605 hypothetical protein K09946 K09946; uncharacterized protein D Daro_1057 Twin-arginine translocation pathway signal K09947 K09947; uncharacterized protein D Daro_1138 conserved hypothetical protein K09954 K09954; uncharacterized protein D Daro_1522 Protein of unknown function DUF1348 K09958 K09958; uncharacterized protein D Daro_1007 conserved hypothetical protein K09959 K09959; uncharacterized protein D Daro_1957 conserved hypothetical protein K09966 K09966; uncharacterized protein D Daro_0072 conserved hypothetical protein K09967 K09967; uncharacterized protein D Daro_0073 conserved hypothetical protein K09967 K09967; uncharacterized protein D Daro_0516 conserved hypothetical protein K09989 K09989; uncharacterized protein D Daro_1122 Protein of unknown function DUF47 K07220 K07220; uncharacterized protein D Daro_0678 phosphate transport regulator-like protein K07220 K07220; uncharacterized protein ! #
#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: April 28, 2024