+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Desulforapulum autotrophicum
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ACRISPR-Cas system
B Universal Cas proteins
C HRM2_05450 putative CRISPR-associated protein (uncharacterized protein, predicted to be involved in DNA repair) K15342 cas1; CRISP-associated protein Cas1
C HRM2_05460 conserved hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D HRM2_05520 putative CRISPR-associated helicase Cas3 (ATP-dependent DNA helicase) K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D HRM2_05530 putative CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-B factors
D HRM2_05480 conserved hypothetical protein K19114 csh1; CRISPR-associated protein Csh1
D HRM2_05500 putative CPISPR-associated protein Cas2 (Csh2 family protein) K19115 csh2; CRISPR-associated protein Csh2
D HRM2_05530 putative CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D HRM2_05510 putative CRISPR-associated protein Cas5 K19116 cas5h; CRISPR-associated protein Cas5h
C Subtype I-C factors
D HRM2_05530 putative CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-D factors
D HRM2_05530 putative CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-E factors
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D HRM2_05530 putative CRISPR-associated protein Cas4 K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C HRM2_19510 hsdR2; HsdR2 K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C HRM2_14680 hsdR1; HsdR1 K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C HRM2_19500 hsdS2; HsdS2 K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C HRM2_14700 hsdS1; HsdS1 K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C HRM2_49090 hsdS3; HsdS3 K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C HRM2_19490 hsdM2; HsdM2 K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C HRM2_14690 hsdM1; HsdM1 K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C HRM2_49100 hsdM3; HsdM3 K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
C DNA methyltransferases
D HRM2_23400 mthZ; MthZ K24451 zim; modification methylase
B Type III R-M system
C HRM2_p00420 putative DEAD/DEAH box helicase, Type III restriction enzyme (subunit) K01156 res; type III restriction enzyme [EC:3.1.21.5]
C HRM2_p00410 site-specific DNA-methyltransferase (Type III DNA modification enzyme) K07316 mod; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
B Type IV R-M system
C HRM2_39760 conserved hypothetical protein K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
D HRM2_44010 mazF; MazF K07171 mazF; mRNA interferase MazF [EC:3.1.-.-]
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
C YoeB-YefM
D HRM2_43780 conserved hypothetical protein K19159 yefM; antitoxin YefM
C HipA-HipB
D HRM2_01630 uncharacterized protein with HipA-like domain K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HRM2_48940 hipA; HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HRM2_44490 hypothetical protein K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D HRM2_25180 putative capsule biosynthesis protein HipA K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
D HRM2_42170 pspC; PspC K03973 pspC; phage shock protein C
C CcdB-CcdA
C ParE-ParD
D HRM2_09770 conserved hypothetical protein K19092 parE1_3_4; toxin ParE1/3/4
D HRM2_09780 conserved hypothetical protein K07746 parD1_3_4; antitoxin ParD1/3/4
C Doc-Phd
C HigB-HigA
D HRM2_p00650 conserved hypothetical protein K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D HRM2_09410 putative plasmid maintenance system killer protein K07334 higB-1; toxin HigB-1
D HRM2_p00640 putative transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D HRM2_48980 conserved hypothetical protein K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D HRM2_09400 plasmid maintenance system antidote protein (HTH-type transcriptional regulator family protein) K21498 higA-1; antitoxin HigA-1
D HRM2_07260 plasmid maintenance system antidote protein (HTH-type transcriptional regulator) K21498 higA-1; antitoxin HigA-1
D HRM2_44030 putative plasmid maintenance system antidote protein K21498 higA-1; antitoxin HigA-1
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D HRM2_12760 ftsZ; FtsZ K03531 ftsZ; cell division protein FtsZ
D HRM2_35270 mreB; MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D HRM2_23360 parC; ParC K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D HRM2_23370 parE; ParE K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D HRM2_31340 gltX; GltX K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C HRM2_41130 iscS2; IscS2 K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C HRM2_34850 iscS1; IscS1 K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023