+D GENES KO
#
KEGG Orthology (KO) - Dokdonia donghaensis
%
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A09100 Metabolism
B
B 09101 Carbohydrate metabolism
C 00010 Glycolysis / Gluconeogenesis [PATH:ddo00010]
D I597_0347 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I597_2253 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I597_0443 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D I597_2809 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I597_1545 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D I597_2884 gap1; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I597_2252 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I597_2526 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I597_0632 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D I597_2578 Histidine phosphatase superfamily (branch 1) K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I597_0192 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D I597_1292 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I597_0571 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I597_1194 acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I597_0240 bfmBAB_1; 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I597_1195 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2126 yahK; Aldehyde reductase YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_0378 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I597_2419 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I597_2307 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D I597_0834 pckA; Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
C 00020 Citrate cycle (TCA cycle) [PATH:ddo00020]
D I597_1293 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D I597_2293 acn; Aconitate hydratase precursor K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D I597_1627 icd2; Isocitrate dehydrogenase [NADP] 2 K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D I597_0328 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D I597_2728 odhB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_1119 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_0327 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_1986 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D I597_1540 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D I597_1003 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D I597_1004 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D I597_1002 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D I597_1803 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D I597_1388 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I597_2131 mqo1; putative malate:quinone oxidoreductase 1 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D I597_2236 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D I597_0834 pckA; Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D I597_1194 acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I597_0240 bfmBAB_1; 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I597_1195 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
C 00030 Pentose phosphate pathway [PATH:ddo00030]
D I597_0347 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I597_1648 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I597_1649 pgl; 6-phosphogluconolactonase K01057 PGLS; 6-phosphogluconolactonase [EC:3.1.1.31]
D I597_1647 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D I597_1367 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D I597_1420 dxs_2; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D I597_1421 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D I597_2341 tal; Transaldolase K00616 TALDO1; transaldolase [EC:2.2.1.2]
D I597_0611 ywlF; Putative sugar phosphate isomerase YwlF K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
D I597_2419 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I597_0470 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D I597_0893 kdgA; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D I597_1908 gntK; Thermoresistant gluconokinase K00851 idnK; gluconokinase [EC:2.7.1.12]
D I597_0894 kdgK_1; 2-dehydro-3-deoxygluconokinase K00874 kdgK; 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45]
D I597_2809 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I597_0443 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D I597_2253 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
C 00040 Pentose and glucuronate interconversions [PATH:ddo00040]
D I597_0902 bacB; Bacilysin biosynthesis protein BacB K26933 kdgF; unsaturated pyranuronate lyase [EC:4.2.99.25]
D I597_2189 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D I597_1367 rpe; Ribulose-phosphate 3-epimerase K01783 rpe; ribulose-phosphate 3-epimerase [EC:5.1.3.1]
D I597_0361 Alpha-ketoglutaric semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00051 Fructose and mannose metabolism [PATH:ddo00051]
D I597_1057 kdgK_3; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D I597_0919 kdgK_2; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D I597_1031 gmuF; putative mannose-6-phosphate isomerase GmuF K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I597_1867 yvyI_1; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I597_1868 yvyI_2; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I597_2221 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D I597_1199 rfbM; Mannose-1-phosphate guanylyltransferase RfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D I597_0641 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D I597_0642 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D I597_2253 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I597_0443 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D I597_0905 cslB; Chondroitinase-B precursor K01729 algL; poly(beta-D-mannuronate) lyase [EC:4.2.2.3]
D I597_2809 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I597_1545 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D I597_0921 sacC; Levanase precursor K03332 fruA; fructan beta-fructosidase [EC:3.2.1.80]
D I597_0611 ywlF; Putative sugar phosphate isomerase YwlF K01808 rpiB; ribose 5-phosphate isomerase B [EC:5.3.1.6]
C 00052 Galactose metabolism [PATH:ddo00052]
D I597_1187 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D I597_1188 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D I597_1179 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I597_1407 galE_2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I597_2419 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I597_1182 Melibiase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D I597_2253 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I597_2624 yicI; Alpha-xylosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D I597_2272 malL; Oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
C 00053 Ascorbate and aldarate metabolism [PATH:ddo00053]
D I597_2189 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D I597_2190 UDP-glucose 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_0361 Alpha-ketoglutaric semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
C 00500 Starch and sucrose metabolism [PATH:ddo00500]
D I597_2624 yicI; Alpha-xylosidase K01187 malZ; alpha-glucosidase [EC:3.2.1.20]
D I597_2240 Sucrose phosphorylase K00690 E2.4.1.7; sucrose phosphorylase [EC:2.4.1.7]
D I597_0070 engD; Endoglucanase D precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D I597_2626 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
D I597_0404 glgA_1; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D I597_2627 glgA_2; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D I597_1529 Glycogen synthase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D I597_2625 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D I597_1637 malS; Alpha-amylase precursor K01176 AMY; alpha-amylase [EC:3.2.1.1]
D I597_2272 malL; Oligo-1,6-glucosidase K01182 IMA; oligo-1,6-glucosidase [EC:3.2.1.10]
D I597_0924 malP; Maltose phosphorylase K00691 mapA; maltose phosphorylase [EC:2.4.1.8]
D I597_0923 yvdM; Beta-phosphoglucomutase K01838 pgmB; beta-phosphoglucomutase [EC:5.4.2.6]
D I597_1056 treF; Cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D I597_2419 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I597_0347 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I597_1057 kdgK_3; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D I597_0919 kdgK_2; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
C 00520 Amino sugar and nucleotide sugar metabolism [PATH:ddo00520]
D I597_2439 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D I597_2424 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D I597_1057 kdgK_3; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D I597_0919 kdgK_2; 2-dehydro-3-deoxygluconokinase K00847 E2.7.1.4; fructokinase [EC:2.7.1.4]
D I597_0402 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I597_1151 murQ; N-acetylmuramic acid 6-phosphate etherase K07106 murQ; N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126]
D I597_0081 anmK; Anhydro-N-acetylmuramic acid kinase K09001 anmK; anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170]
D I597_1645 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I597_2872 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D I597_1525 legI; N,N'-diacetyllegionaminic acid synthase K05304 NANS; sialic acid synthase [EC:2.5.1.56 2.5.1.57 2.5.1.132]
D I597_0262 wbpE; UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D I597_2197 UDP-glucose 4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
D I597_2196 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D I597_2184 capD; UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D I597_2307 ppgK; Polyphosphate glucokinase K00886 ppgK; polyphosphate glucokinase [EC:2.7.1.63]
D I597_2419 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I597_2189 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D I597_1187 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D I597_1188 galT; Galactose-1-phosphate uridylyltransferase K00965 galT; UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12]
D I597_1179 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I597_1407 galE_2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I597_2190 UDP-glucose 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D I597_0347 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I597_1031 gmuF; putative mannose-6-phosphate isomerase GmuF K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I597_1867 yvyI_1; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I597_1868 yvyI_2; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I597_2221 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D I597_1199 rfbM; Mannose-1-phosphate guanylyltransferase RfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D I597_0641 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D I597_0642 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D I597_2626 glgC; Glucose-1-phosphate adenylyltransferase K00975 glgC; glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]
C 00620 Pyruvate metabolism [PATH:ddo00620]
D I597_0378 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I597_1194 acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I597_0240 bfmBAB_1; 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I597_1195 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2126 yahK; Aldehyde reductase YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D I597_0571 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I597_2861 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D I597_0137 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D I597_0136 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D I597_2810 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_1652 Glyoxalase-like domain protein K01759 GLO1; lactoylglutathione lyase [EC:4.4.1.5]
D I597_1353 putative metallo-hydrolase K01069 gloB; hydroxyacylglutathione hydrolase [EC:3.1.2.6]
D I597_1058 maeB; NADP-dependent malic enzyme K00029 maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]
D I597_2236 cfiB; 2-oxoglutarate carboxylase small subunit K01958 PC; pyruvate carboxylase [EC:6.4.1.1]
D I597_1388 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I597_2131 mqo1; putative malate:quinone oxidoreductase 1 K00116 mqo; malate dehydrogenase (quinone) [EC:1.1.5.4]
D I597_1803 fumC; Fumarate hydratase class II K01679 E4.2.1.2B; fumarate hydratase, class II [EC:4.2.1.2]
D I597_2206 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D I597_0834 pckA; Phosphoenolpyruvate carboxykinase K01610 pckA; phosphoenolpyruvate carboxykinase (ATP) [EC:4.1.1.49]
D I597_2818 aceB; Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I597_1169 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00630 Glyoxylate and dicarboxylate metabolism [PATH:ddo00630]
D I597_2817 Isocitrate lyase K01637 E4.1.3.1; isocitrate lyase [EC:4.1.3.1]
D I597_0378 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I597_2818 aceB; Malate synthase A K01638 aceB; malate synthase [EC:2.3.3.9]
D I597_1388 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I597_1293 gltA2; Citrate synthase 1 K01647 CS; citrate synthase [EC:2.3.3.1]
D I597_2293 acn; Aconitate hydratase precursor K01681 ACO; aconitate hydratase [EC:4.2.1.3]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I597_0145 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D I597_0331 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I597_0333 scpA_1; Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I597_2816 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D I597_2491 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_2492 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_1884 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D I597_1207 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D I597_1770 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_1061 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D I597_1869 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D I597_0893 kdgA; KHG/KDPG aldolase K01625 eda; 2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.42]
D I597_2471 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
C 00640 Propanoate metabolism [PATH:ddo00640]
D I597_0378 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I597_1939 bfmBAB_3; 2-oxoisovalerate dehydrogenase subunit beta K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D I597_1121 bfmBAB_2; 2-oxoisovalerate dehydrogenase subunit beta K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2861 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D I597_0137 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D I597_0136 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D I597_2810 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D I597_0145 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D I597_0331 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I597_0333 scpA_1; Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I597_1540 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D I597_1986 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
C 00650 Butanoate metabolism [PATH:ddo00650]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I597_2733 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I597_1110 paaH; 3-hydroxyadipyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I597_2232 fadN; putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D I597_0511 echA8_1; putative enoyl-CoA hydratase echA8 K01715 crt; enoyl-CoA hydratase [EC:4.2.1.17]
D I597_1003 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D I597_1004 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D I597_1002 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D I597_1904 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I597_2154 sad; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I597_2245 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D I597_0542 scoA; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D I597_0541 scoB; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D I597_2653 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I597_2652 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
C 00660 C5-Branched dibasic acid metabolism [PATH:ddo00660]
D I597_2653 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I597_2652 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I597_1540 sucC; Succinyl-CoA ligase [ADP-forming] subunit beta K01903 sucC; succinyl-CoA synthetase beta subunit [EC:6.2.1.5]
D I597_1986 sucD; Succinyl-CoA ligase [ADP-forming] subunit alpha K01902 sucD; succinyl-CoA synthetase alpha subunit [EC:6.2.1.5]
D I597_1168 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D I597_1167 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D I597_1166 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
C 00562 Inositol phosphate metabolism
D I597_1545 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
B
B 09102 Energy metabolism
C 00190 Oxidative phosphorylation [PATH:ddo00190]
D I597_1003 frdA; Fumarate reductase flavoprotein subunit K00239 sdhA; succinate dehydrogenase flavoprotein subunit [EC:1.3.5.1]
D I597_1004 frdB; Fumarate reductase iron-sulfur subunit K00240 sdhB; succinate dehydrogenase iron-sulfur subunit [EC:1.3.5.1]
D I597_1002 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 sdhC; succinate dehydrogenase cytochrome b subunit
D I597_1069 ctaB1; Protoheme IX farnesyltransferase 1 K02257 COX10; heme o synthase [EC:2.5.1.141]
D I597_1070 ctaE_1; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D I597_1071 ctaE_2; Cytochrome c oxidase subunit 3 K02276 coxC; cytochrome c oxidase subunit III [EC:7.1.1.9]
D I597_1050 coxN; Alternative cytochrome c oxidase subunit 1 K02274 coxA; cytochrome c oxidase subunit I [EC:7.1.1.9]
D I597_1049 coxM; Alternative cytochrome c oxidase subunit 2 K02275 coxB; cytochrome c oxidase subunit II [EC:7.1.1.9]
D I597_1663 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D I597_0677 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D I597_0401 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D I597_0678 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D I597_0676 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D I597_0400 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D I597_0673 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D I597_0675 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D I597_0674 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D I597_0238 ppa; Inorganic pyrophosphatase K01507 ppa; inorganic pyrophosphatase [EC:3.6.1.1]
D I597_1933 ppk_1; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D I597_2262 ppk_2; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
C 00195 Photosynthesis
C 00196 Photosynthesis - antenna proteins
C 00710 Carbon fixation in photosynthetic organisms
C 00720 Carbon fixation pathways in prokaryotes
C 00680 Methane metabolism [PATH:ddo00680]
D I597_1884 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D I597_2816 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D I597_1292 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I597_2206 ppc; Phosphoenolpyruvate carboxylase K01595 ppc; phosphoenolpyruvate carboxylase [EC:4.1.1.31]
D I597_1388 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I597_2809 fbaA; Fructose-bisphosphate aldolase class 2 K01624 FBA; fructose-bisphosphate aldolase, class II [EC:4.1.2.13]
D I597_0443 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D I597_2253 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I597_2441 glpC_2; Anaerobic glycerol-3-phosphate dehydrogenase subunit C K08264 hdrD; heterodisulfide reductase subunit D [EC:1.8.98.1]
D I597_0378 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I597_2578 Histidine phosphatase superfamily (branch 1) K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I597_0192 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D I597_0456 serA_1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I597_2318 serA_2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I597_2317 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00910 Nitrogen metabolism [PATH:ddo00910]
D I597_0662 Nitronate monooxygenase K00459 ncd2; nitronate monooxygenase [EC:1.13.12.16]
D I597_1018 Aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D I597_0758 gdhA_2; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D I597_2491 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_2492 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_1581 gltB_1; Ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D I597_1582 gltB_2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D I597_0778 mtcA2; Carbonic anhydrase 2 K01673 cynT; carbonic anhydrase [EC:4.2.1.1]
C 00920 Sulfur metabolism [PATH:ddo00920]
D I597_1733 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D I597_1732 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D I597_2191 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D I597_1556 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
D I597_1731 cysH; Phosphoadenosine phosphosulfate reductase K00390 cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]
D I597_1847 cysJ; Sulfite reductase [NADPH] flavoprotein alpha-component K00380 cysJ; sulfite reductase (NADPH) flavoprotein alpha-component [EC:1.8.1.2]
D I597_0498 DoxX K16937 doxD; thiosulfate dehydrogenase (quinone) large subunit [EC:1.8.5.2]
D I597_0155 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D I597_1358 cysE_1; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D I597_1532 cysE_2; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D I597_0217 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
B
B 09103 Lipid metabolism
C 00061 Fatty acid biosynthesis [PATH:ddo00061]
D I597_2861 accA; Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha K01962 accA; acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2 2.1.3.15]
D I597_0137 accB; Biotin carboxyl carrier protein of acetyl-CoA carboxylase K02160 accB; acetyl-CoA carboxylase biotin carboxyl carrier protein
D I597_0136 accC; Biotin carboxylase K01961 accC; acetyl-CoA carboxylase, biotin carboxylase subunit [EC:6.4.1.2 6.3.4.14]
D I597_2810 accD; Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta K01963 accD; acetyl-CoA carboxylase carboxyl transferase subunit beta [EC:6.4.1.2 2.1.3.15]
D I597_1949 acpP_2; Acyl carrier protein K02078 acpP; acyl carrier protein
D I597_0576 acpP_1; Acyl carrier protein K02078 acpP; acyl carrier protein
D I597_0256 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D I597_0138 fabH_1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I597_1206 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I597_2509 fabH_3; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I597_0575 fabF_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I597_1948 fabF_3; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I597_0391 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I597_1988 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1375 gno_2; Gluconate 5-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1655 linC; 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1947 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D I597_1981 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D I597_2744 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D I597_2391 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D I597_1946 fabL; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D I597_2098 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
C 00062 Fatty acid elongation
C 00071 Fatty acid degradation [PATH:ddo00071]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I597_2233 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D I597_2232 fadN; putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D I597_0316 acd; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I597_2098 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I597_0625 alkB2; Alkane 1-monooxygenase 2 K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00073 Cutin, suberine and wax biosynthesis
C 00100 Steroid biosynthesis
C 00120 Primary bile acid biosynthesis
C 00121 Secondary bile acid biosynthesis
C 00140 Steroid hormone biosynthesis
C 00561 Glycerolipid metabolism [PATH:ddo00561]
D I597_1869 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_2126 yahK; Aldehyde reductase YahK K13979 yahK; alcohol dehydrogenase (NADP+) [EC:1.1.1.2]
D I597_1181 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D I597_0550 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I597_2566 dgkA; Undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D I597_1182 Melibiase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
C 00564 Glycerophospholipid metabolism [PATH:ddo00564]
D I597_0772 gpsA; Glycerol-3-phosphate dehydrogenase [NAD(P)+] K00057 gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94]
D I597_0550 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
D I597_2566 dgkA; Undecaprenol kinase K00901 dgkA; diacylglycerol kinase (ATP) [EC:2.7.1.107]
D I597_1646 glpQ; Glycerophosphoryl diester phosphodiesterase precursor K01126 E3.1.4.46; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
D I597_2878 cdsA; Phosphatidate cytidylyltransferase K00981 E2.7.7.41; phosphatidate cytidylyltransferase [EC:2.7.7.41]
D I597_1552 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D I597_2877 phosphatidylserine decarboxylase K01613 psd; phosphatidylserine decarboxylase [EC:4.1.1.65]
C 00565 Ether lipid metabolism
C 00600 Sphingolipid metabolism [PATH:ddo00600]
D I597_1182 Melibiase K07407 E3.2.1.22B; alpha-galactosidase [EC:3.2.1.22]
D I597_2424 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
C 00590 Arachidonic acid metabolism
C 00591 Linoleic acid metabolism
D I597_1302 desA3; Stearoyl-CoA 9-desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
C 00592 alpha-Linolenic acid metabolism [PATH:ddo00592]
D I597_2233 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01040 Biosynthesis of unsaturated fatty acids [PATH:ddo01040]
D I597_2137 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
B
B 09104 Nucleotide metabolism
C 00230 Purine metabolism [PATH:ddo00230]
D I597_2419 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I597_0470 prs; Ribose-phosphate pyrophosphokinase K00948 PRPS; ribose-phosphate pyrophosphokinase [EC:2.7.6.1]
D I597_0585 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D I597_0655 purD; Phosphoribosylamine--glycine ligase K01945 purD; phosphoribosylamine---glycine ligase [EC:6.3.4.13]
D I597_0577 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D I597_1298 purT; Phosphoribosylglycinamide formyltransferase 2 K08289 purT; phosphoribosylglycinamide formyltransferase 2 [EC:6.3.1.21]
D I597_2102 purL; Phosphoribosylformylglycinamidine synthase K01952 PFAS; phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]
D I597_2479 purM; Phosphoribosylformylglycinamidine cyclo-ligase K01933 purM; phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]
D I597_1219 purK; N5-carboxyaminoimidazole ribonucleotide synthase K01589 purK; 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
D I597_1218 purE; N5-carboxyaminoimidazole ribonucleotide mutase K01588 purE; 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
D I597_2672 purC; Phosphoribosylaminoimidazole-succinocarboxamide synthase K01923 purC; phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6]
D I597_1910 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D I597_0045 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D I597_1876 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D I597_2753 yfkN_2; Trifunctional nucleotide phosphoesterase protein YfkN precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D I597_0086 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D I597_0116 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D I597_1683 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D I597_1557 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D I597_2031 Non-canonical purine NTP pyrophosphatase K01519 rdgB; XTP/dITP diphosphohydrolase [EC:3.6.1.66]
D I597_2404 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I597_0700 gmk; Guanylate kinase K00942 gmk; guanylate kinase [EC:2.7.4.8]
D I597_1006 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D I597_1005 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D I597_1012 dgt; Deoxyguanosinetriphosphate triphosphohydrolase K01129 dgt; dGTPase [EC:3.1.5.1]
D I597_2494 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D I597_2261 gppA; Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase K01524 ppx-gppA; exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40]
D I597_2515 cyaA; Adenylate cyclase 1 K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D I597_0881 CYTH domain protein K01768 E4.6.1.1; adenylate cyclase [EC:4.6.1.1]
D I597_2496 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D I597_0232 dck; Deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D I597_1220 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D I597_1733 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D I597_1732 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
C 00240 Pyrimidine metabolism [PATH:ddo00240]
D I597_2375 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D I597_1291 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D I597_2268 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D I597_2076 pyrC; Dihydroorotase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D I597_0949 allB; Allantoinase K01465 URA4; dihydroorotase [EC:3.5.2.3]
D I597_2275 pyrD; Dihydroorotate dehydrogenase (quinone) K00254 DHODH; dihydroorotate dehydrogenase [EC:1.3.5.2]
D I597_1423 pyrE; Orotate phosphoribosyltransferase K00762 pyrE; orotate phosphoribosyltransferase [EC:2.4.2.10]
D I597_2475 orotidine 5'-phosphate decarboxylase K01591 pyrF; orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
D I597_0165 pyrH; Uridylate kinase K09903 pyrH; uridylate kinase [EC:2.7.4.22]
D I597_1557 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D I597_1797 maf; Septum formation protein Maf K06287 yhdE; nucleoside triphosphate pyrophosphatase [EC:3.6.1.-]
D I597_1685 pyrG; CTP synthase K01937 pyrG; CTP synthase [EC:6.3.4.2]
D I597_2610 cmk; Cytidylate kinase K00945 cmk; CMP/dCMP kinase [EC:2.7.4.25]
D I597_0335 udk; Uridine kinase K00876 udk; uridine kinase [EC:2.7.1.48]
D I597_2753 yfkN_2; Trifunctional nucleotide phosphoesterase protein YfkN precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D I597_0086 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D I597_1934 udp; Uridine phosphorylase K00757 udp; uridine phosphorylase [EC:2.4.2.3]
D I597_1416 pyrR_1; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D I597_2269 pyrR_2; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D I597_1193 cdd; Cytidine deaminase K01489 cdd; cytidine deaminase [EC:3.5.4.5]
D I597_1006 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D I597_1005 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D I597_0232 dck; Deoxyadenosine/deoxycytidine kinase K15519 dck; deoxyadenosine/deoxycytidine kinase [EC:2.7.1.76 2.7.1.74]
D I597_0436 tRNA-specific adenosine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D I597_0683 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D I597_0765 tdk; Thymidine kinase K00857 tdk; thymidine kinase [EC:2.7.1.21]
D I597_0246 thyA2; Thymidylate synthase 2 K00560 thyA; thymidylate synthase [EC:2.1.1.45]
B
B 09105 Amino acid metabolism
C 00250 Alanine, aspartate and glutamate metabolism [PATH:ddo00250]
D I597_2873 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1301 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_2901 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D I597_0734 iaaA; Isoaspartyl peptidase precursor K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D I597_2856 asnB; Asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D I597_0421 2-oxoglutaramate amidase K13566 NIT2; omega-amidase [EC:3.5.1.3]
D I597_2816 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D I597_0823 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D I597_1748 ald2; Alanine dehydrogenase 2 K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D I597_1156 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D I597_1163 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D I597_2496 purA; Adenylosuccinate synthetase K01939 purA; adenylosuccinate synthase [EC:6.3.4.4]
D I597_1910 purB; Adenylosuccinate lyase K01756 purB; adenylosuccinate lyase [EC:4.3.2.2]
D I597_2268 pyrB; Aspartate carbamoyltransferase K00609 pyrB; aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2]
D I597_1904 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I597_2154 sad; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I597_1581 gltB_1; Ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D I597_1582 gltB_2; Glutamate synthase [NADPH] small chain K00266 gltD; glutamate synthase (NADPH) small chain [EC:1.4.1.13]
D I597_0758 gdhA_2; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D I597_0212 rocA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D I597_2491 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_2492 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_2375 carB; Carbamoyl-phosphate synthase large chain K01955 carB; carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
D I597_1291 carA; Carbamoyl-phosphate synthase small chain K01956 carA; carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]
D I597_0182 glsA; Thermolabile glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D I597_0402 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I597_0585 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
C 00260 Glycine, serine and threonine metabolism [PATH:ddo00260]
D I597_0445 lysC_1; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I597_0999 lysC_2; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I597_2326 thrA_2; Bifunctional aspartokinase/homoserine dehydrogenase 1 K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D I597_0768 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I597_0218 thrA_1; Bifunctional aspartokinase/homoserine dehydrogenase 1 K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D I597_2327 thrB; Homoserine kinase K00872 thrB; homoserine kinase [EC:2.7.1.39]
D I597_1772 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
D I597_1692 ltaA; L-allo-threonine aldolase K01620 ltaE; threonine aldolase [EC:4.1.2.48]
D I597_1884 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D I597_2816 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D I597_1869 glxK; Glycerate kinase K00865 glxK; glycerate 2-kinase [EC:2.7.1.165]
D I597_2578 Histidine phosphatase superfamily (branch 1) K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I597_0192 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase K15633 gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
D I597_0456 serA_1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I597_2318 serA_2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I597_2317 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D I597_0589 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D I597_1697 Putative pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D I597_1207 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D I597_1770 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_1061 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
D I597_1552 CDP-alcohol phosphatidyltransferase K17103 CHO1; CDP-diacylglycerol---serine O-phosphatidyltransferase [EC:2.7.8.8]
D I597_1696 cbs_1; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D I597_1749 cbs_2; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D I597_1176 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D I597_2650 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D I597_1436 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D I597_1438 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D I597_0451 ddc; L-2,4-diaminobutyrate decarboxylase K13745 ddc; L-2,4-diaminobutyrate decarboxylase [EC:4.1.1.86]
C 00270 Cysteine and methionine metabolism [PATH:ddo00270]
D I597_1358 cysE_1; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D I597_1532 cysE_2; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D I597_2352 mccB_1; Cystathionine gamma-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I597_0756 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I597_1696 cbs_1; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D I597_1749 cbs_2; Putative cystathionine beta-synthase K01697 CBS; cystathionine beta-synthase [EC:4.2.1.22]
D I597_0215 metH_1; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I597_0216 metH_2; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I597_0221 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
D I597_2560 mccB_2; Cystathionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D I597_0043 msrC; Free methionine-R-sulfoxide reductase K08968 msrC; L-methionine (R)-S-oxide reductase [EC:1.8.4.14]
D I597_2848 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I597_0827 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D I597_1125 dcyD; D-cysteine desulfhydrase K01505 E3.5.99.7; 1-aminocyclopropane-1-carboxylate deaminase [EC:3.5.99.7]
D I597_0445 lysC_1; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I597_0999 lysC_2; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I597_2326 thrA_2; Bifunctional aspartokinase/homoserine dehydrogenase 1 K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D I597_0768 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I597_0218 thrA_1; Bifunctional aspartokinase/homoserine dehydrogenase 1 K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D I597_0220 mdeA; Methionine gamma-lyase K01740 metY; O-acetylhomoserine (thiol)-lyase [EC:2.5.1.49]
D I597_0217 metZ; O-succinylhomoserine sulfhydrylase K10764 metZ; O-succinylhomoserine sulfhydrylase [EC:2.5.1.-]
D I597_0190 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_1120 ilvK; Branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_2641 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_2873 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1301 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_0155 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D I597_1388 mdh; Malate dehydrogenase K00024 mdh; malate dehydrogenase [EC:1.1.1.37]
D I597_1176 tdcG; L-serine dehydratase TdcG K01752 E4.3.1.17; L-serine dehydratase [EC:4.3.1.17]
D I597_1357 cysM; Cysteine synthase B K12339 cysM; S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) [EC:2.5.1.144]
D I597_0456 serA_1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I597_2318 serA_2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I597_2317 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
C 00280 Valine, leucine and isoleucine degradation [PATH:ddo00280]
D I597_0190 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_1120 ilvK; Branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_2641 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_1939 bfmBAB_3; 2-oxoisovalerate dehydrogenase subunit beta K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D I597_1121 bfmBAB_2; 2-oxoisovalerate dehydrogenase subunit beta K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2233 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D I597_0145 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein K05606 MCEE; methylmalonyl-CoA/ethylmalonyl-CoA epimerase [EC:5.1.99.1]
D I597_0331 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I597_0333 scpA_1; Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_2667 accD5; putative propionyl-CoA carboxylase beta chain 5 K01969 MCCC2; 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4]
D I597_2245 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D I597_0542 scoA; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit A K01028 scoA; 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
D I597_0541 scoB; Succinyl-CoA:3-ketoacid coenzyme A transferase subunit B K01029 scoB; 3-oxoacid CoA-transferase subunit B [EC:2.8.3.5]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00290 Valine, leucine and isoleucine biosynthesis [PATH:ddo00290]
D I597_2650 tdcB; L-threonine dehydratase catabolic TdcB K01754 E4.3.1.19; threonine dehydratase [EC:4.3.1.19]
D I597_1168 leuC; 3-isopropylmalate dehydratase large subunit K01703 leuC; 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
D I597_1167 leuD; 3-isopropylmalate dehydratase small subunit K01704 leuD; 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:4.2.1.33 4.2.1.35]
D I597_1166 leuB; 3-isopropylmalate dehydrogenase K00052 leuB; 3-isopropylmalate dehydrogenase [EC:1.1.1.85]
D I597_2653 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I597_2652 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I597_2651 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D I597_2654 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D I597_0190 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_1120 ilvK; Branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_2641 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_1169 leuA; 2-isopropylmalate synthase K01649 leuA; 2-isopropylmalate synthase [EC:2.3.3.13]
C 00300 Lysine biosynthesis [PATH:ddo00300]
D I597_0218 thrA_1; Bifunctional aspartokinase/homoserine dehydrogenase 1 K00003 hom; homoserine dehydrogenase [EC:1.1.1.3]
D I597_0445 lysC_1; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I597_0999 lysC_2; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I597_2326 thrA_2; Bifunctional aspartokinase/homoserine dehydrogenase 1 K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D I597_0768 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I597_2750 dapA_2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D I597_2784 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
D I597_2598 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase K00674 dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [EC:2.3.1.117]
D I597_1159 argD_1; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D I597_2378 argD_2; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D I597_2524 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D I597_2831 dapL; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D I597_2388 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D I597_1321 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D I597_1189 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
C 00310 Lysine degradation [PATH:ddo00310]
D I597_0731 betB; NAD/NADP-dependent betaine aldehyde dehydrogenase K26061 amaB; L-aminoadipate-semialdehyde dehydrogenase
D I597_2728 odhB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_1119 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_0327 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_0316 acd; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I597_1904 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I597_2154 sad; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00220 Arginine biosynthesis [PATH:ddo00220]
D I597_1156 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D I597_1163 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D I597_0182 glsA; Thermolabile glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D I597_2491 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_2492 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_0758 gdhA_2; NAD(P)-specific glutamate dehydrogenase K00262 E1.4.1.4; glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
D I597_2873 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1301 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1161 argB; Acetylglutamate kinase K00930 argB; acetylglutamate kinase [EC:2.7.2.8]
D I597_1157 argC; N-acetyl-gamma-glutamyl-phosphate reductase K00145 argC; N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]
D I597_1159 argD_1; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D I597_2378 argD_2; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D I597_1162 dapE_2; Succinyl-diaminopimelate desuccinylase K01438 argE; acetylornithine deacetylase [EC:3.5.1.16]
C 00330 Arginine and proline metabolism [PATH:ddo00330]
D I597_2167 speA; Biosynthetic arginine decarboxylase K01585 speA; arginine decarboxylase [EC:4.1.1.19]
D I597_2168 N(1)-aminopropylagmatine ureohydrolase K01480 speB; agmatinase [EC:3.5.3.11]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_2523 speG; Spermidine N(1)-acetyltransferase K00657 speG; diamine N-acetyltransferase [EC:2.3.1.57]
D I597_1395 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I597_1617 rocD2; Ornithine aminotransferase 2 K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D I597_1158 proC; Pyrroline-5-carboxylate reductase K00286 proC; pyrroline-5-carboxylate reductase [EC:1.5.1.2]
D I597_1745 fadM; Proline dehydrogenase 1 K00318 PRODH; proline dehydrogenase [EC:1.5.5.2]
D I597_0212 rocA; 1-pyrroline-5-carboxylate dehydrogenase K00294 E1.2.1.88; 1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]
D I597_2873 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1301 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
C 00340 Histidine metabolism [PATH:ddo00340]
D I597_1994 hisG; ATP phosphoribosyltransferase K00765 hisG; ATP phosphoribosyltransferase [EC:2.4.2.17]
D I597_2302 hisE; Phosphoribosyl-ATP pyrophosphatase K11755 hisIE; phosphoribosyl-AMP cyclohydrolase / phosphoribosyl-ATP pyrophosphohydrolase [EC:3.5.4.19 3.6.1.31]
D I597_1999 hisA; 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase K01814 hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
D I597_1998 hisH; Imidazole glycerol phosphate synthase subunit HisH K02501 hisH; imidazole glycerol-phosphate synthase subunit HisH [EC:4.3.2.10]
D I597_2303 hisF; Imidazole glycerol phosphate synthase subunit HisF K02500 hisF; imidazole glycerol-phosphate synthase subunit HisF [EC:4.3.2.10]
D I597_1997 hisB; Histidine biosynthesis bifunctional protein HisB K01089 hisB; imidazoleglycerol-phosphate dehydratase / histidinol-phosphatase [EC:4.2.1.19 3.1.3.15]
D I597_1996 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I597_1995 hisD; Histidinol dehydrogenase K00013 hisD; histidinol dehydrogenase [EC:1.1.1.23]
D I597_2084 hutH; Histidine ammonia-lyase K01745 hutH; histidine ammonia-lyase [EC:4.3.1.3]
D I597_1123 hutU; Urocanate hydratase K01712 hutU; urocanate hydratase [EC:4.2.1.49]
D I597_2353 hutI; Imidazolonepropionase K01468 hutI; imidazolonepropionase [EC:3.5.2.7]
D I597_2355 hutG_2; Formimidoylglutamase K01479 hutG; formiminoglutamase [EC:3.5.3.8]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_0250 egtD; Histidine-specific methyltransferase EgtD K18911 egtD; L-histidine Nalpha-methyltransferase [EC:2.1.1.44]
C 00350 Tyrosine metabolism [PATH:ddo00350]
D I597_2873 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1301 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1996 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I597_0355 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D I597_0356 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D I597_1883 Fumarylacetoacetate (FAA) hydrolase family protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D I597_1904 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I597_2154 sad; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00360 Phenylalanine metabolism [PATH:ddo00360]
D I597_1100 phhA; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D I597_1111 paaI; Acyl-coenzyme A thioesterase PaaI K02614 paaI; acyl-CoA thioesterase [EC:3.1.2.-]
D I597_1104 paaA; 1,2-phenylacetyl-CoA epoxidase, subunit A K02609 paaA; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149]
D I597_1105 paaB; 1,2-phenylacetyl-CoA epoxidase, subunit B K02610 paaB; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB
D I597_1106 paaC; 1,2-phenylacetyl-CoA epoxidase, subunit C K02611 paaC; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149]
D I597_1107 paaD; Putative 1,2-phenylacetyl-CoA epoxidase, subunit D K02612 paaD; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD
D I597_1103 paaE_2; 1,2-phenylacetyl-CoA epoxidase, subunit E K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D I597_0666 paaE_1; 1,2-phenylacetyl-CoA epoxidase, subunit E K02613 paaE; ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE
D I597_1108 paaG; 1,2-epoxyphenylacetyl-CoA isomerase K15866 paaG; 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase [EC:5.3.3.18]
D I597_1114 paaZ; Bifunctional protein PaaZ K02618 paaZ; oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase [EC:3.3.2.12 1.2.1.91]
D I597_2733 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I597_1110 paaH; 3-hydroxyadipyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I597_2873 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1301 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1996 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I597_0355 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D I597_0358 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
D I597_0431 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
D I597_1395 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
C 00380 Tryptophan metabolism [PATH:ddo00380]
D I597_0349 kynA; Tryptophan 2,3-dioxygenase K00453 TDO2; tryptophan 2,3-dioxygenase [EC:1.13.11.11]
D I597_1379 kmo; Kynurenine 3-monooxygenase K00486 KMO; kynurenine 3-monooxygenase [EC:1.14.13.9]
D I597_1381 kynU; Kynureninase K01556 KYNU; kynureninase [EC:3.7.1.3]
D I597_0732 nbaC; 3-hydroxyanthranilate 3,4-dioxygenase K00452 HAAO; 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
D I597_1373 Amidohydrolase K03392 ACMSD; aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45]
D I597_1376 amnC; 2-aminomuconic 6-semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D I597_1378 amnD; 2-aminomuconate deaminase K15067 amnD; 2-aminomuconate deaminase [EC:3.5.99.5]
D I597_2728 odhB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_1119 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_0327 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_0316 acd; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_1018 Aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D I597_1395 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I597_0431 katG; Catalase-peroxidase K03782 katG; catalase-peroxidase [EC:1.11.1.21]
C 00400 Phenylalanine, tyrosine and tryptophan biosynthesis [PATH:ddo00400]
D I597_1744 aroB; 3-dehydroquinate synthase K01735 aroB; 3-dehydroquinate synthase [EC:4.2.3.4]
D I597_2631 aroQ; 3-dehydroquinate dehydratase K03786 aroQ; 3-dehydroquinate dehydratase II [EC:4.2.1.10]
D I597_1415 aroK; Shikimate kinase K00891 aroK; shikimate kinase [EC:2.7.1.71]
D I597_2821 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase K00800 aroA; 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
D I597_2433 aroC; Chorismate synthase K01736 aroC; chorismate synthase [EC:4.2.3.5]
D I597_1445 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D I597_1444 pabA; Aminodeoxychorismate/anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D I597_1442 trpD2; Anthranilate phosphoribosyltransferase 2 K00766 trpD; anthranilate phosphoribosyltransferase [EC:2.4.2.18]
D I597_1439 trpF; N-(5'-phosphoribosyl)anthranilate isomerase K01817 trpF; phosphoribosylanthranilate isomerase [EC:5.3.1.24]
D I597_1441 trpC; Indole-3-glycerol phosphate synthase K01609 trpC; indole-3-glycerol phosphate synthase [EC:4.1.1.48]
D I597_1436 trpA; Tryptophan synthase alpha chain K01695 trpA; tryptophan synthase alpha chain [EC:4.2.1.20]
D I597_1438 trpB; Tryptophan synthase beta chain K01696 trpB; tryptophan synthase beta chain [EC:4.2.1.20]
D I597_2829 aroF; Phospho-2-dehydro-3-deoxyheptonate aldolase K04516 AROA1; chorismate mutase [EC:5.4.99.5]
D I597_2830 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D I597_2832 pheA; P-protein K04518 pheA2; prephenate dehydratase [EC:4.2.1.51]
D I597_2873 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1301 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1996 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I597_1100 phhA; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
B
B 09106 Metabolism of other amino acids
C 00410 beta-Alanine metabolism [PATH:ddo00410]
D I597_0406 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_0405 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
C 00430 Taurine and hypotaurine metabolism [PATH:ddo00430]
D I597_2223 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D I597_0823 ald; Alanine dehydrogenase K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
D I597_1748 ald2; Alanine dehydrogenase 2 K00259 ald; alanine dehydrogenase [EC:1.4.1.1]
C 00440 Phosphonate and phosphinate metabolism
D I597_2072 phnP; Phosphoribosyl 1,2-cyclic phosphodiesterase K06167 phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]
C 00450 Selenocompound metabolism [PATH:ddo00450]
D I597_2352 mccB_1; Cystathionine gamma-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I597_0756 metC; Cystathionine beta-lyase K01760 metC; cysteine-S-conjugate beta-lyase [EC:4.4.1.13]
D I597_0215 metH_1; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I597_0216 metH_2; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I597_2560 mccB_2; Cystathionine gamma-lyase K01761 E4.4.1.11; methionine-gamma-lyase [EC:4.4.1.11]
D I597_0977 csd_1; putative cysteine desulfurase K11717 sufS; cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]
D I597_2777 trxB; Thioredoxin reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D I597_0964 Ferredoxin--NADP reductase K00384 trxB; thioredoxin reductase (NADPH) [EC:1.8.1.9]
D I597_1733 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D I597_1732 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D I597_0482 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
C 00460 Cyanoamino acid metabolism [PATH:ddo00460]
D I597_1018 Aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
D I597_2223 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D I597_2901 ansA; L-asparaginase 1 K01424 E3.5.1.1; L-asparaginase [EC:3.5.1.1]
D I597_0734 iaaA; Isoaspartyl peptidase precursor K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D I597_1884 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
C 00470 D-Amino acid metabolism [PATH:ddo00470]
D I597_0766 vanT; Serine/alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D I597_1433 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I597_0182 glsA; Thermolabile glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D I597_0309 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D I597_1323 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D I597_2524 dapF; Diaminopimelate epimerase K01778 dapF; diaminopimelate epimerase [EC:5.1.1.7]
D I597_2388 lysA; Diaminopimelate decarboxylase K01586 lysA; diaminopimelate decarboxylase [EC:4.1.1.20]
D I597_0359 4-hydroxyproline epimerase K12658 lhpA; 4-hydroxyproline epimerase [EC:5.1.1.8]
D I597_0363 dapA_1; 4-hydroxy-tetrahydrodipicolinate synthase K21062 lhpC; 1-pyrroline-4-hydroxy-2-carboxylate deaminase [EC:3.5.4.22]
D I597_0361 Alpha-ketoglutaric semialdehyde dehydrogenase K13877 aldH; 2,5-dioxopentanoate dehydrogenase [EC:1.2.1.26]
D I597_0358 dadA; D-amino acid dehydrogenase small subunit K00285 dadA; D-amino-acid dehydrogenase [EC:1.4.5.1]
C 00480 Glutathione metabolism [PATH:ddo00480]
D I597_2223 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D I597_2659 LamB/YcsF family protein K07160 pxpA; 5-oxoprolinase (ATP-hydrolysing) subunit A [EC:3.5.2.9]
D I597_2333 pepN_2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I597_1553 pepD; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D I597_0499 garB; Glutathione amide reductase K00383 GSR; glutathione reductase (NADPH) [EC:1.8.1.7]
D I597_1627 icd2; Isocitrate dehydrogenase [NADP] 2 K00031 IDH1; isocitrate dehydrogenase [EC:1.1.1.42]
D I597_1647 gndA; 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating K00033 PGD; 6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]
D I597_1648 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
B
B 09107 Glycan biosynthesis and metabolism
C 00510 N-Glycan biosynthesis
C 00513 Various types of N-glycan biosynthesis
C 00512 Mucin type O-glycan biosynthesis
C 00515 Mannose type O-glycan biosynthesis
C 00514 Other types of O-glycan biosynthesis
C 00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
C 00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
C 00533 Glycosaminoglycan biosynthesis - keratan sulfate
C 00531 Glycosaminoglycan degradation
C 00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
C 00601 Glycosphingolipid biosynthesis - lacto and neolacto series
C 00603 Glycosphingolipid biosynthesis - globo and isoglobo series
C 00604 Glycosphingolipid biosynthesis - ganglio series
C 00511 Other glycan degradation [PATH:ddo00511]
D I597_2424 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D I597_0156 N(4)-(Beta-N-acetylglucosaminyl)-L-asparaginase precursor K01444 AGA; N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]
C 00540 Lipopolysaccharide biosynthesis [PATH:ddo00540]
D I597_1982 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D I597_1981 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D I597_1980 lpxD_1; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D I597_1984 lpxD_2; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D I597_0553 lpxH_1; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D I597_0088 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D I597_2886 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D I597_2705 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D I597_2892 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D I597_1799 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D I597_2200 kpsU; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D I597_0261 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D I597_2219 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D I597_0024 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D I597_0646 O-Antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
C 00542 O-Antigen repeat unit biosynthesis [PATH:ddo00542]
D I597_2178 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 00541 O-Antigen nucleotide sugar biosynthesis [PATH:ddo00541]
D I597_1179 galE_1; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I597_1407 galE_2; UDP-glucose 4-epimerase K01784 galE; UDP-glucose 4-epimerase [EC:5.1.3.2]
D I597_2189 tuaD; UDP-glucose 6-dehydrogenase TuaD K00012 UGDH; UDPglucose 6-dehydrogenase [EC:1.1.1.22]
D I597_2190 UDP-glucose 4-epimerase K08679 GAE; UDP-glucuronate 4-epimerase [EC:5.1.3.6]
D I597_2194 rmlA2; Glucose-1-phosphate thymidylyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I597_0685 glmU; Bifunctional protein GlmU K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I597_2195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I597_0650 UDP-glucose 4-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I597_2193 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D I597_2192 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
D I597_1031 gmuF; putative mannose-6-phosphate isomerase GmuF K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I597_1867 yvyI_1; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I597_1868 yvyI_2; Putative mannose-6-phosphate isomerase YvyI K01809 manA; mannose-6-phosphate isomerase [EC:5.3.1.8]
D I597_2221 algC; Phosphomannomutase/phosphoglucomutase K01840 manB; phosphomannomutase [EC:5.4.2.8]
D I597_1199 rfbM; Mannose-1-phosphate guanylyltransferase RfbM K00971 manC; mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
D I597_0641 gmd; GDP-mannose 4,6-dehydratase K01711 gmd; GDPmannose 4,6-dehydratase [EC:4.2.1.47]
D I597_0642 fcl; GDP-L-fucose synthase K02377 TSTA3; GDP-L-fucose synthase [EC:1.1.1.271]
D I597_2184 capD; UDP-glucose 4-epimerase K15894 pseB; UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase [EC:4.2.1.115 5.1.3.-]
D I597_2182 NAD dependent epimerase/dehydratase family protein K19068 wbjC; UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase [EC:1.1.1.367]
D I597_2181 wbpI; UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase K24258 wbjD; UDP-N-acetyl-L-fucosamine synthase [EC:5.1.3.28]
D I597_2196 wbpA; UDP-N-acetyl-D-glucosamine 6-dehydrogenase K02474 wbpO; UDP-N-acetyl-D-glucosamine/UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.136 1.1.1.-]
D I597_0262 wbpE; UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
D I597_2197 UDP-glucose 4-epimerase K02473 wbpP; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine 4-epimerase [EC:5.1.3.7 5.1.3.-]
C 00550 Peptidoglycan biosynthesis [PATH:ddo00550]
D I597_1645 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I597_2872 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D I597_1326 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D I597_1323 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D I597_1321 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D I597_1433 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I597_1189 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D I597_0305 ispU; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D I597_0714 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I597_1493 undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I597_1370 phosphatidylglycerophosphatase B K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I597_1322 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D I597_1325 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D I597_0543 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D I597_0880 pbpD; Penicillin-binding protein 4 precursor K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D I597_0049 spoVD_1; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D I597_1320 spoVD_2; Stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
C 00552 Teichoic acid biosynthesis [PATH:ddo00552]
D I597_0714 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I597_1493 undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I597_1370 phosphatidylglycerophosphatase B K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I597_2178 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D I597_2601 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase K18704 tarL; CDP-ribitol ribitolphosphotransferase / teichoic acid ribitol-phosphate polymerase [EC:2.7.8.14 2.7.8.47]
C 00571 Lipoarabinomannan (LAM) biosynthesis
C 00572 Arabinogalactan biosynthesis - Mycobacterium
C 00543 Exopolysaccharide biosynthesis [PATH:ddo00543]
D I597_0649 putative glycosyl transferase K03208 wcaI; putative colanic acid biosynthesis glycosyltransferase WcaI
D I597_0648 Putative acetyltransferase K03818 wcaF; putative colanic acid biosynthesis acetyltransferase WcaF [EC:2.3.1.-]
D I597_2178 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D I597_1527 patA; Peptidoglycan O-acetyltransferase K19294 algI; alginate O-acetyltransferase complex protein AlgI
D I597_1358 cysE_1; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
D I597_1532 cysE_2; Serine acetyltransferase K00640 cysE; serine O-acetyltransferase [EC:2.3.1.30]
B
B 09108 Metabolism of cofactors and vitamins
C 00730 Thiamine metabolism [PATH:ddo00730]
D I597_1622 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I597_1014 dxs_1; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D I597_0375 hypothetical protein K00788 thiE; thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
D I597_0994 thiL; Thiamine-monophosphate kinase K00946 thiL; thiamine-monophosphate kinase [EC:2.7.4.16]
D I597_2827 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D I597_1203 phoB_1; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D I597_1220 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
C 00740 Riboflavin metabolism [PATH:ddo00740]
D I597_0383 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D I597_2570 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D I597_2760 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D I597_2792 ribH; 6,7-dimethyl-8-ribityllumazine synthase K00794 ribH; 6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]
D I597_0142 ribE; Riboflavin synthase K00793 ribE; riboflavin synthase [EC:2.5.1.9]
D I597_0467 ribF; Riboflavin biosynthesis protein RibF K11753 ribF; riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2]
C 00750 Vitamin B6 metabolism [PATH:ddo00750]
D I597_2264 pdxH; Pyridoxine/pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D I597_0169 pyridoxamine 5'-phosphate oxidase K00275 pdxH; pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]
D I597_2317 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D I597_0301 pdxJ; Pyridoxine 5'-phosphate synthase K03474 pdxJ; pyridoxine 5-phosphate synthase [EC:2.6.99.2]
D I597_1772 thrC; Threonine synthase K01733 thrC; threonine synthase [EC:4.2.3.1]
C 00760 Nicotinate and nicotinamide metabolism [PATH:ddo00760]
D I597_2034 nadC; Nicotinate-nucleotide pyrophosphorylase K00767 nadC; nicotinate-nucleotide pyrophosphorylase (carboxylating) [EC:2.4.2.19]
D I597_0116 punA; Purine nucleoside phosphorylase 1 K03783 punA; purine-nucleoside phosphorylase [EC:2.4.2.1]
D I597_2753 yfkN_2; Trifunctional nucleotide phosphoesterase protein YfkN precursor K01081 E3.1.3.5; 5'-nucleotidase [EC:3.1.3.5]
D I597_0086 surE; 5'-nucleotidase SurE K03787 surE; 5'/3'-nucleotidase [EC:3.1.3.5 3.1.3.6]
D I597_0698 nadD; Nicotinate-nucleotide adenylyltransferase K00969 nadD; nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18]
D I597_1311 nadE; NH(3)-dependent NAD(+) synthetase K01916 nadE; NAD+ synthase [EC:6.3.1.5]
D I597_2027 cobB; NAD-dependent protein deacylase K12410 cobB; NAD-dependent protein deacetylase/lipoamidase [EC:2.3.1.286 2.3.1.313]
D I597_0303 ppnK; putative inorganic polyphosphate/ATP-NAD kinase K00858 ppnK; NAD+ kinase [EC:2.7.1.23]
D I597_1904 gabD1; Succinate-semialdehyde dehydrogenase [NADP(+)] 1 K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
D I597_2154 sad; Succinate semialdehyde dehydrogenase [NAD(P)+] Sad K00135 gabD; succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:1.2.1.16 1.2.1.79 1.2.1.20]
C 00770 Pantothenate and CoA biosynthesis [PATH:ddo00770]
D I597_2653 ilvB; Acetolactate synthase large subunit K01652 E2.2.1.6L; acetolactate synthase I/II/III large subunit [EC:2.2.1.6]
D I597_2652 ilvH; Putative acetolactate synthase small subunit K01653 E2.2.1.6S; acetolactate synthase I/III small subunit [EC:2.2.1.6]
D I597_2651 ilvC; Ketol-acid reductoisomerase K00053 ilvC; ketol-acid reductoisomerase [EC:1.1.1.86]
D I597_2654 ilvD; Dihydroxy-acid dehydratase K01687 ilvD; dihydroxy-acid dehydratase [EC:4.2.1.9]
D I597_1173 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase K00606 panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]
D I597_0405 panC; Pantothenate synthetase K01918 panC; pantoate--beta-alanine ligase [EC:6.3.2.1]
D I597_0102 coaX; Type III pantothenate kinase K03525 coaX; type III pantothenate kinase [EC:2.7.1.33]
D I597_2747 coaBC; Coenzyme A biosynthesis bifunctional protein CoaBC K13038 coaBC; phosphopantothenoylcysteine decarboxylase / phosphopantothenate---cysteine ligase [EC:4.1.1.36 6.3.2.5]
D I597_1434 coaD; Phosphopantetheine adenylyltransferase K00954 E2.7.7.3A; pantetheine-phosphate adenylyltransferase [EC:2.7.7.3]
D I597_2741 coaE; Dephospho-CoA kinase K00859 coaE; dephospho-CoA kinase [EC:2.7.1.24]
D I597_0826 hypothetical protein K06133 LYS5; 4'-phosphopantetheinyl transferase [EC:2.7.8.-]
D I597_2222 acpH; Acyl carrier protein phosphodiesterase K08682 acpH; acyl carrier protein phosphodiesterase [EC:3.1.4.14]
D I597_0190 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_1120 ilvK; Branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_2641 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_0406 panD; Aspartate 1-decarboxylase precursor K01579 panD; aspartate 1-decarboxylase [EC:4.1.1.11]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00780 Biotin metabolism [PATH:ddo00780]
D I597_0575 fabF_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I597_1948 fabF_3; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I597_0391 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I597_1988 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1375 gno_2; Gluconate 5-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1655 linC; 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1947 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D I597_2744 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D I597_0395 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D I597_0393 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D I597_0394 bioD1; ATP-dependent dethiobiotin synthetase BioD 1 K01935 bioD; dethiobiotin synthetase [EC:6.3.3.3]
D I597_0390 bioB; Biotin synthase K01012 bioB; biotin synthase [EC:2.8.1.6]
D I597_2882 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
C 00785 Lipoic acid metabolism [PATH:ddo00785]
D I597_1140 lipB; Octanoyltransferase K03801 lipB; lipoyl(octanoyl) transferase [EC:2.3.1.181]
D I597_2883 lipA; Lipoyl synthase K03644 lipA; lipoyl synthase [EC:2.8.1.8]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_1194 acoA; Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha K00161 PDHA; pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1]
D I597_0240 bfmBAB_1; 2-oxoisovalerate dehydrogenase subunit beta K00162 PDHB; pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1]
D I597_1195 pdhC; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00627 DLAT; pyruvate dehydrogenase E2 component (dihydrolipoyllysine-residue acetyltransferase) [EC:2.3.1.12]
D I597_0328 sucA; 2-oxoglutarate dehydrogenase E1 component K00164 OGDH; 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]
D I597_2728 odhB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_1119 aceF; Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_0327 sucB; Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex K00658 DLST; 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61]
D I597_1939 bfmBAB_3; 2-oxoisovalerate dehydrogenase subunit beta K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D I597_1121 bfmBAB_2; 2-oxoisovalerate dehydrogenase subunit beta K11381 bkdA; 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4]
D I597_1207 gcvP; Glycine dehydrogenase (decarboxylating) K00281 GLDC; glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
D I597_1770 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D I597_1061 gcvH; Glycine cleavage system H protein K02437 gcvH; glycine cleavage system H protein
C 00790 Folate biosynthesis [PATH:ddo00790]
D I597_2715 folE_2; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D I597_2082 folE_1; GTP cyclohydrolase 1 K01495 GCH1; GTP cyclohydrolase IA [EC:3.5.4.16]
D I597_1203 phoB_1; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D I597_0616 folB; Dihydroneopterin aldolase K01633 folB; 7,8-dihydroneopterin aldolase/epimerase/oxygenase [EC:4.1.2.25 5.1.99.8 1.13.11.81]
D I597_1549 folP; Dihydropteroate synthase K00796 folP; dihydropteroate synthase [EC:2.5.1.15]
D I597_0255 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D I597_0075 folC; Bifunctional protein FolC K11754 folC; dihydrofolate synthase / folylpolyglutamate synthase [EC:6.3.2.12 6.3.2.17]
D I597_0383 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D I597_2570 ribBA; Riboflavin biosynthesis protein RibBA K14652 ribBA; 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]
D I597_2590 pabB; Aminodeoxychorismate synthase component 1 K01665 pabB; para-aminobenzoate synthetase component I [EC:2.6.1.85]
D I597_0552 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D I597_1757 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D I597_2605 phhB; Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D I597_1100 phhA; Phenylalanine-4-hydroxylase K00500 phhA; phenylalanine-4-hydroxylase [EC:1.14.16.1]
D I597_1384 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
C 00670 One carbon pool by folate [PATH:ddo00670]
D I597_0255 dfrA; Dihydrofolate reductase K00287 DHFR; dihydrofolate reductase [EC:1.5.1.3]
D I597_2412 folD; Bifunctional protein FolD protein K01491 folD; methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9]
D I597_1884 glyA; Serine hydroxymethyltransferase K00600 glyA; glycine hydroxymethyltransferase [EC:2.1.2.1]
D I597_0577 purN; Phosphoribosylglycinamide formyltransferase K11175 purN; phosphoribosylglycinamide formyltransferase 1 [EC:2.1.2.2]
D I597_0045 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D I597_1640 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D I597_1770 gcvT; Aminomethyltransferase K00605 gcvT; glycine cleavage system T protein (aminomethyltransferase) [EC:2.1.2.10]
D I597_0215 metH_1; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I597_0216 metH_2; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I597_0246 thyA2; Thymidylate synthase 2 K00560 thyA; thymidylate synthase [EC:2.1.1.45]
D I597_2471 purU; Formyltetrahydrofolate deformylase K01433 purU; formyltetrahydrofolate deformylase [EC:3.5.1.10]
D I597_0214 metF; 5,10-methylenetetrahydrofolate reductase K00297 metF; methylenetetrahydrofolate reductase (NADH) [EC:1.5.1.54]
D I597_0564 putative 5-formyltetrahydrofolate cyclo-ligase K01934 MTHFS; 5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]
C 00830 Retinol metabolism
C 00860 Porphyrin metabolism [PATH:ddo00860]
D I597_0624 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I597_0519 hemA; Glutamyl-tRNA reductase K02492 hemA; glutamyl-tRNA reductase [EC:1.2.1.70]
D I597_1127 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D I597_0528 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D I597_0520 hemC; Porphobilinogen deaminase K01749 hemC; hydroxymethylbilane synthase [EC:2.5.1.61]
D I597_0521 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D I597_0946 uroporphyrinogen-III synthase K01719 hemD; uroporphyrinogen-III synthase [EC:4.2.1.75]
D I597_0522 hemE; Uroporphyrinogen decarboxylase K01599 hemE; uroporphyrinogen decarboxylase [EC:4.1.1.37]
D I597_0526 hemF; Coproporphyrinogen-III oxidase, aerobic K00228 CPOX; coproporphyrinogen III oxidase [EC:1.3.3.3]
D I597_0513 hypothetical protein K08973 hemJ; protoporphyrinogen IX oxidase [EC:1.3.99.-]
D I597_0517 hemH; Ferrochelatase K01772 hemH; protoporphyrin/coproporphyrin ferrochelatase [EC:4.98.1.1 4.99.1.9]
D I597_1069 ctaB1; Protoheme IX farnesyltransferase 1 K02257 COX10; heme o synthase [EC:2.5.1.141]
D I597_1663 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D I597_1504 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D I597_2021 hypothetical protein K03405 chlI; magnesium chelatase subunit I [EC:6.6.1.1]
C 00130 Ubiquinone and other terpenoid-quinone biosynthesis [PATH:ddo00130]
D I597_2805 ubiE; Demethylmenaquinone methyltransferase K03183 ubiE; demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]
D I597_1591 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
D I597_1592 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase K02551 menD; 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:2.2.1.9]
D I597_2637 menE; 2-succinylbenzoate--CoA ligase K01911 menE; o-succinylbenzoate---CoA ligase [EC:6.2.1.26]
D I597_1596 menB; 1,4-Dihydroxy-2-naphthoyl-CoA synthase K01661 menB; naphthoate synthase [EC:4.1.3.36]
D I597_1590 Putative esterase K19222 menI; 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [EC:3.1.2.28]
D I597_1638 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D I597_0466 Vitamin K-dependent gamma-carboxylase K10106 GGCX; vitamin K-dependent gamma-carboxylase [EC:4.1.1.90]
D I597_0355 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
B
B 09109 Metabolism of terpenoids and polyketides
C 00900 Terpenoid backbone biosynthesis [PATH:ddo00900]
D I597_1014 dxs_1; 1-deoxy-D-xylulose-5-phosphate synthase K01662 dxs; 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I597_0094 mvaA; 3-hydroxy-3-methylglutaryl-coenzyme A reductase K00054 mvaA; hydroxymethylglutaryl-CoA reductase [EC:1.1.1.88]
D I597_0938 hypothetical protein K00869 MVK; mevalonate kinase [EC:2.7.1.36]
D I597_0937 hypothetical protein K01597 MVD; diphosphomevalonate decarboxylase [EC:4.1.1.33]
D I597_1756 idi; Isopentenyl-diphosphate Delta-isomerase K01823 idi; isopentenyl-diphosphate Delta-isomerase [EC:5.3.3.2]
D I597_0280 (2E,6E)-farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D I597_2813 sdsA; All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D I597_0305 ispU; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
C 00902 Monoterpenoid biosynthesis
C 00909 Sesquiterpenoid and triterpenoid biosynthesis
C 00904 Diterpenoid biosynthesis
C 00906 Carotenoid biosynthesis [PATH:ddo00906]
D I597_1409 crtB; All-trans-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D I597_1410 carA2; zeta-carotene-forming phytoene desaturase K10027 crtI; phytoene desaturase [EC:1.3.99.26 1.3.99.28 1.3.99.29 1.3.99.31]
D I597_0502 Lycopene cyclase protein K06443 lcyB; lycopene beta-cyclase [EC:5.5.1.19]
D I597_1408 Fatty acid hydroxylase superfamily protein K15746 crtZ; beta-carotene 3-hydroxylase [EC:1.14.15.24]
C 00905 Brassinosteroid biosynthesis
C 00981 Insect hormone biosynthesis
C 00908 Zeatin biosynthesis
C 00903 Limonene degradation
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
C 00907 Pinene, camphor and geraniol degradation [PATH:ddo00907]
D I597_2245 yngG; Hydroxymethylglutaryl-CoA lyase YngG K01640 HMGCL; hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]
D I597_2233 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 01052 Type I polyketide structures
C 00522 Biosynthesis of 12-, 14- and 16-membered macrolides
C 01051 Biosynthesis of ansamycins
D I597_1420 dxs_2; 1-deoxy-D-xylulose-5-phosphate synthase K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
D I597_1421 tktA; Transketolase 1 K00615 E2.2.1.1; transketolase [EC:2.2.1.1]
C 01059 Biosynthesis of enediyne antibiotics
D I597_0929 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
D I597_0931 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
D I597_1183 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
D I597_1250 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
C 01056 Biosynthesis of type II polyketide backbone
C 01057 Biosynthesis of type II polyketide products
D I597_1068 cphA; Beta-lactamase precursor K05555 actIV; cyclase [EC:4.-.-.-]
C 00253 Tetracycline biosynthesis
C 00523 Polyketide sugar unit biosynthesis [PATH:ddo00523]
D I597_2194 rmlA2; Glucose-1-phosphate thymidylyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I597_0685 glmU; Bifunctional protein GlmU K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I597_2195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I597_0650 UDP-glucose 4-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I597_2193 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D I597_2192 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 01054 Nonribosomal peptide structures
C 01053 Biosynthesis of siderophore group nonribosomal peptides
D I597_1591 dhbC; Isochorismate synthase DhbC K02361 entC; isochorismate synthase [EC:5.4.4.2]
C 01055 Biosynthesis of vancomycin group antibiotics
D I597_2195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I597_0650 UDP-glucose 4-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
B
B 09110 Biosynthesis of other secondary metabolites
C 00940 Phenylpropanoid biosynthesis
C 00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis
C 00941 Flavonoid biosynthesis
C 00944 Flavone and flavonol biosynthesis
C 00942 Anthocyanin biosynthesis
C 00943 Isoflavonoid biosynthesis
C 00946 Degradation of flavonoids
C 00901 Indole alkaloid biosynthesis
C 00403 Indole diterpene alkaloid biosynthesis
C 00950 Isoquinoline alkaloid biosynthesis
C 00960 Tropane, piperidine and pyridine alkaloid biosynthesis
C 00996 Biosynthesis of various alkaloids
C 00232 Caffeine metabolism
C 00965 Betalain biosynthesis
C 00966 Glucosinolate biosynthesis
C 00402 Benzoxazinoid biosynthesis
C 00311 Penicillin and cephalosporin biosynthesis
D I597_2226 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
C 00332 Carbapenem biosynthesis
C 00261 Monobactam biosynthesis [PATH:ddo00261]
D I597_1733 cysNC; Bifunctional enzyme CysN/CysC K00956 cysN; sulfate adenylyltransferase subunit 1 [EC:2.7.7.4]
D I597_1732 cysD; Sulfate adenylyltransferase subunit 2 K00957 cysD; sulfate adenylyltransferase subunit 2 [EC:2.7.7.4]
D I597_0445 lysC_1; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I597_0999 lysC_2; Lysine-sensitive aspartokinase 3 K00928 lysC; aspartate kinase [EC:2.7.2.4]
D I597_2326 thrA_2; Bifunctional aspartokinase/homoserine dehydrogenase 1 K12524 thrA; bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]
D I597_0768 asd; Aspartate-semialdehyde dehydrogenase K00133 asd; aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]
D I597_2750 dapA_2; 4-hydroxy-tetrahydrodipicolinate synthase K01714 dapA; 4-hydroxy-tetrahydrodipicolinate synthase [EC:4.3.3.7]
D I597_2784 dapB; 4-hydroxy-tetrahydrodipicolinate reductase K00215 dapB; 4-hydroxy-tetrahydrodipicolinate reductase [EC:1.17.1.8]
C 00331 Clavulanic acid biosynthesis
C 00521 Streptomycin biosynthesis [PATH:ddo00521]
D I597_2419 pgcA; Phosphoglucomutase K01835 pgm; phosphoglucomutase [EC:5.4.2.2]
D I597_2194 rmlA2; Glucose-1-phosphate thymidylyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I597_0685 glmU; Bifunctional protein GlmU K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I597_2195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I597_0650 UDP-glucose 4-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I597_2193 rmlC; dTDP-4-dehydrorhamnose 3,5-epimerase K01790 rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13]
D I597_2192 rmlD; dTDP-4-dehydrorhamnose reductase K00067 rfbD; dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
C 00524 Neomycin, kanamycin and gentamicin biosynthesis
C 00525 Acarbose and validamycin biosynthesis [PATH:ddo00525]
D I597_2194 rmlA2; Glucose-1-phosphate thymidylyltransferase 2 K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I597_0685 glmU; Bifunctional protein GlmU K00973 rfbA; glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24]
D I597_2195 rfbB; dTDP-glucose 4,6-dehydratase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
D I597_0650 UDP-glucose 4-epimerase K01710 rfbB; dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
C 00401 Novobiocin biosynthesis [PATH:ddo00401]
D I597_2830 prephenate dehydrogenase K04517 tyrA2; prephenate dehydrogenase [EC:1.3.1.12]
D I597_2873 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1301 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1996 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
C 00404 Staurosporine biosynthesis
C 00405 Phenazine biosynthesis
D I597_1445 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D I597_1444 pabA; Aminodeoxychorismate/anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
C 00333 Prodigiosin biosynthesis
D I597_0256 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D I597_1988 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1375 gno_2; Gluconate 5-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1655 linC; 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_2744 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
C 00254 Aflatoxin biosynthesis
C 00998 Biosynthesis of various antibiotics
D I597_1949 acpP_2; Acyl carrier protein K02078 acpP; acyl carrier protein
D I597_0576 acpP_1; Acyl carrier protein K02078 acpP; acyl carrier protein
C 00999 Biosynthesis of various plant secondary metabolites
D I597_0221 metK; S-adenosylmethionine synthase K00789 metK; S-adenosylmethionine synthetase [EC:2.5.1.6]
C 00997 Biosynthesis of various other secondary metabolites
B
B 09111 Xenobiotics biodegradation and metabolism
C 00362 Benzoate degradation [PATH:ddo00362]
D I597_2233 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
D I597_1112 pcaF; Beta-ketoadipyl-CoA thiolase K07823 pcaF; 3-oxoadipyl-CoA thiolase [EC:2.3.1.174]
D I597_1376 amnC; 2-aminomuconic 6-semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
D I597_2232 fadN; putative 3-hydroxyacyl-CoA dehydrogenase K07516 fadN; 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
D I597_0316 acd; Glutaryl-CoA dehydrogenase K00252 GCDH; glutaryl-CoA dehydrogenase [EC:1.3.8.6]
D I597_2733 mmgB; putative 3-hydroxybutyryl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I597_1110 paaH; 3-hydroxyadipyl-CoA dehydrogenase K00074 paaH; 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
C 00627 Aminobenzoate degradation [PATH:ddo00627]
D I597_1395 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I597_1018 Aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00364 Fluorobenzoate degradation [PATH:ddo00364]
D I597_2242 clcD; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00625 Chloroalkane and chloroalkene degradation [PATH:ddo00625]
D I597_2655 alkH; Aldehyde dehydrogenase K00128 ALDH; aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]
D I597_0503 (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D I597_2312 Phosphorylated carbohydrates phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00361 Chlorocyclohexane and chlorobenzene degradation [PATH:ddo00361]
D I597_2242 clcD; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
D I597_0503 (S)-2-haloacid dehalogenase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
D I597_2312 Phosphorylated carbohydrates phosphatase K01560 E3.8.1.2; 2-haloacid dehalogenase [EC:3.8.1.2]
C 00623 Toluene degradation [PATH:ddo00623]
D I597_2242 clcD; Carboxymethylenebutenolidase K01061 E3.1.1.45; carboxymethylenebutenolidase [EC:3.1.1.45]
C 00622 Xylene degradation
D I597_1376 amnC; 2-aminomuconic 6-semialdehyde dehydrogenase K10217 dmpC; aminomuconate-semialdehyde/2-hydroxymuconate-6-semialdehyde dehydrogenase [EC:1.2.1.32 1.2.1.85]
C 00633 Nitrotoluene degradation [PATH:ddo00633]
D I597_2125 nemA; N-ethylmaleimide reductase K10680 nemA; N-ethylmaleimide reductase [EC:1.-.-.-]
C 00642 Ethylbenzene degradation
D I597_2233 fadA; 3-ketoacyl-CoA thiolase K00632 fadA; acetyl-CoA acyltransferase [EC:2.3.1.16]
C 00643 Styrene degradation [PATH:ddo00643]
D I597_0356 hmgA; Homogentisate 1,2-dioxygenase K00451 HGD; homogentisate 1,2-dioxygenase [EC:1.13.11.5]
D I597_1883 Fumarylacetoacetate (FAA) hydrolase family protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D I597_1395 gatA; Glutamyl-tRNA(Gln) amidotransferase subunit A K01426 E3.5.1.4; amidase [EC:3.5.1.4]
D I597_1018 Aliphatic nitrilase K01501 E3.5.5.1; nitrilase [EC:3.5.5.1]
C 00791 Atrazine degradation
C 00930 Caprolactam degradation
D I597_0625 alkB2; Alkane 1-monooxygenase 2 K00496 alkB1_2; alkane 1-monooxygenase [EC:1.14.15.3]
C 00363 Bisphenol degradation
C 00621 Dioxin degradation
C 00626 Naphthalene degradation
C 00624 Polycyclic aromatic hydrocarbon degradation
C 00365 Furfural degradation
C 00984 Steroid degradation
C 00980 Metabolism of xenobiotics by cytochrome P450
C 00982 Drug metabolism - cytochrome P450
C 00983 Drug metabolism - other enzymes
B
B 09112 Not included in regular maps
C 09113 Global maps only
#
A09120 Genetic Information Processing
B
B 09121 Transcription
C 03020 RNA polymerase [PATH:ddo03020]
D I597_2684 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D I597_2683 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D I597_1288 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
C 03022 Basal transcription factors
C 03040 Spliceosome
B
B 09122 Translation
C 03010 Ribosome [PATH:ddo03010]
D I597_2602 rpsA_2; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D I597_0162 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D I597_1269 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D I597_1287 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D I597_1280 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D I597_2040 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D I597_1260 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D I597_1277 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D I597_0161 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D I597_1262 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D I597_1286 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D I597_1259 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D I597_1285 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D I597_1276 rpsN2; Alternate 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D I597_2835 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D I597_0319 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D I597_1272 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D I597_2041 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D I597_1267 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D I597_1630 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D I597_2699 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D I597_2687 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D I597_1266 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D I597_1263 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D I597_1264 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D I597_1275 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D I597_1278 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D I597_2685 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D I597_2042 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D I597_2686 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D I597_2688 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D I597_0160 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D I597_1273 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D I597_1282 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D I597_1270 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D I597_1289 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D I597_1279 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D I597_1629 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D I597_0064 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D I597_2910 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D I597_1268 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D I597_1265 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D I597_1274 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D I597_0469 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D I597_2909 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D I597_2721 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D I597_1271 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D I597_1281 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D I597_2415 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D I597_0139 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D I597_2720 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D I597_2376 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D I597_0063 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D I597_1605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I597_0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I597_1144 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I597_0057 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I597_1147 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I597_1608 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I597_0056 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I597_1148 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I597_1609 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
C 00970 Aminoacyl-tRNA biosynthesis [PATH:ddo00970]
D I597_0058 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I597_0592 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I597_1146 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I597_1607 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I597_1875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I597_1332 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I597_1957 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I597_1342 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I597_0815 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D I597_0818 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D I597_0615 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D I597_1036 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I597_1631 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I597_1632 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I597_1232 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I597_2694 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I597_0270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I597_2350 tRNA-His K14226 tRNA-His; tRNA His
D I597_0059 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I597_1145 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I597_1606 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I597_0271 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I597_0471 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I597_0892 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I597_1412 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I597_1413 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I597_1414 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I597_0144 tRNA-Met K14230 tRNA-Met; tRNA Met
D I597_0008 tRNA-Met K14230 tRNA-Met; tRNA Met
D I597_2643 tRNA-Met K14230 tRNA-Met; tRNA Met
D I597_2917 tRNA-Met K14230 tRNA-Met; tRNA Met
D I597_0104 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D I597_0969 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I597_0967 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I597_1956 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I597_1813 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I597_1955 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I597_2900 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I597_2693 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I597_1759 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I597_2696 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I597_2691 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D I597_2695 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D I597_0073 tRNA-Val K14237 tRNA-Val; tRNA Val
D I597_0074 tRNA-Val K14237 tRNA-Val; tRNA Val
D I597_0624 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I597_0618 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D I597_1097 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D I597_0944 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I597_0170 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D I597_0417 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D I597_0061 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D I597_0465 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D I597_2716 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D I597_0482 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D I597_1640 fmt; Methionyl-tRNA formyltransferase K00604 MTFMT; methionyl-tRNA formyltransferase [EC:2.1.2.9]
D I597_2875 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D I597_0825 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I597_0558 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D I597_1137 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D I597_2797 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I597_1633 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D I597_1922 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D I597_0774 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D I597_2336 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D I597_0952 tyrS1; Tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I597_0551 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
C 03013 Nucleocytoplasmic transport
C 03015 mRNA surveillance pathway
C 03008 Ribosome biogenesis in eukaryotes
B
B 09123 Folding, sorting and degradation
C 03060 Protein export [PATH:ddo03060]
D I597_1283 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I597_2690 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I597_0029 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I597_1386 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D I597_2011 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I597_1686 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I597_1502 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I597_2413 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I597_1393 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D I597_1369 twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D I597_0636 tatAy; Sec-independent protein translocase protein TatAy K03116 tatA; sec-independent protein translocase protein TatA
D I597_2706 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
D I597_2785 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I597_0561 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
C 04141 Protein processing in endoplasmic reticulum
C 04130 SNARE interactions in vesicular transport
C 04120 Ubiquitin mediated proteolysis
C 04122 Sulfur relay system [PATH:ddo04122]
D I597_1622 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I597_0155 sseA; 3-mercaptopyruvate sulfurtransferase K01011 TST; thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
D I597_2393 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
C 03050 Proteasome
C 03018 RNA degradation [PATH:ddo03018]
D I597_1292 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I597_2836 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D I597_1669 rhlE_1; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D I597_1676 rhlE_2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D I597_0612 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D I597_2030 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I597_2143 rhlE_3; ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I597_2704 recQ_3; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I597_0381 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I597_1641 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I597_1729 hypothetical protein K03628 rho; transcription termination factor Rho
D I597_1154 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D I597_2253 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I597_2506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I597_0032 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I597_1933 ppk_1; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D I597_2262 ppk_2; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D I597_1672 cca; Multifunctional CCA protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
B
B 09124 Replication and repair
C 03030 DNA replication [PATH:ddo03030]
D I597_2725 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2736 uvrC_2; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2123 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_0423 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_0322 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I597_2285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I597_0631 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I597_2449 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I597_2348 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I597_2860 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D I597_1309 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D I597_0380 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0840 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0578 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D I597_1142 rnhB; Ribonuclease K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D I597_0157 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I597_2755 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03410 Base excision repair [PATH:ddo03410]
D I597_2069 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D I597_1931 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D I597_0843 yfhQ; putative A/G-specific adenine glycosylase YfhQ K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D I597_0718 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D I597_0413 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D I597_0157 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I597_0554 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D I597_2755 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03420 Nucleotide excision repair [PATH:ddo03420]
D I597_0497 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D I597_2066 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D I597_2096 uvrA_2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D I597_2379 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D I597_0568 uvrC_1; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D I597_2457 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I597_0157 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I597_2755 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03430 Mismatch repair [PATH:ddo03430]
D I597_0273 mutS_1; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D I597_1930 mutS2_2; Endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D I597_2790 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D I597_2457 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I597_0554 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D I597_0380 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0840 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0322 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I597_2348 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I597_2285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I597_2449 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I597_0631 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I597_2725 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2736 uvrC_2; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2123 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_0423 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2755 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
C 03440 Homologous recombination [PATH:ddo03440]
D I597_0554 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D I597_0380 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0840 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_2794 recF_2; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D I597_0760 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D I597_2730 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D I597_0547 recombinase A K03553 recA; recombination protein RecA
D I597_0157 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I597_1059 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D I597_1051 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D I597_0875 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D I597_2334 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D I597_0322 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I597_2348 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I597_2285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I597_2449 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I597_0631 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I597_2725 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2736 uvrC_2; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2123 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_0423 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2038 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
C 03450 Non-homologous end-joining
C 03460 Fanconi anemia pathway
B
B 09126 Chromosome
C 03082 ATP-dependent chromatin remodeling
C 03083 Polycomb repressive complex
B
B 09125 Information processing in viruses
C 03230 Viral genome structure
C 03240 Viral replication
C 03250 Viral life cycle - HIV-1 [PATH:ddo03250]
D I597_2511 ppiB_2; putative peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
C 03260 Virion - Human immunodeficiency virus
C 03271 Virion - Rotavirus
C 03262 Virion - Coronavirus
C 03261 Virion - Influenza virus
C 03263 Virion - Enterovirus
C 03264 Virion - Flavivirus
C 03265 Virion - Ebolavirus and Lyssavirus
C 03266 Virion - Herpesvirus
C 03268 Virion - Orthopoxvirus
C 03267 Virion - Adenovirus
C 03259 Virion - Bacteriophages T4 and T7
C 03258 Virion - Bacteriophage lambda
#
A09130 Environmental Information Processing
B
B 09131 Membrane transport
C 02010 ABC transporters [PATH:ddo02010]
D I597_2445 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I597_1202 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I597_1201 metN; Methionine import ATP-binding protein MetN K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D I597_0854 troA; Periplasmic zinc-binding protein TroA precursor K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D I597_0857 mntB_1; Manganese transport system membrane protein MntB K11708 troC; manganese/zinc/iron transport system permease protein
D I597_0858 mntB_2; Manganese transport system membrane protein MntB K11709 troD; manganese/zinc/iron transport system permease protein
D I597_0855 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D I597_1511 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D I597_1512 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D I597_0147 lolE; Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D I597_2362 ytrF; ABC transporter permease YtrF precursor K09808 lolC_E; lipoprotein-releasing system permease protein
D I597_2080 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D I597_2569 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D I597_2863 lptG; Lipopolysaccharide export system permease protein LptG K11720 lptG; lipopolysaccharide export system permease protein
D I597_0663 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D I597_2708 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D I597_0712 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D I597_1568 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D I597_2420 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D I597_2008 yheI; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I597_2514 putative ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I597_0583 lagD; Lactococcin-G-processing and transport ATP-binding protein LagD K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
C 02060 Phosphotransferase system (PTS)
C 03070 Bacterial secretion system [PATH:ddo03070]
D I597_1084 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_0010 bepC_1; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_0278 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_2919 bepC_2; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_1386 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D I597_2690 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I597_0029 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I597_1283 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I597_2011 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I597_1686 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I597_1502 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I597_1393 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D I597_2413 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I597_1369 twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D I597_0636 tatAy; Sec-independent protein translocase protein TatAy K03116 tatA; sec-independent protein translocase protein TatA
D I597_2706 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
B
B 09132 Signal transduction
C 02020 Two-component system [PATH:ddo02020]
D I597_2740 phoR_2; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I597_0957 phoR_1; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I597_0956 phoP_1; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D I597_1203 phoB_1; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D I597_2525 degP; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D I597_1663 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D I597_1583 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D I597_0229 mprA_1; Response regulator MprA K07672 trcR; two-component system, OmpR family, response regulator TrcR
D I597_2426 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D I597_0793 kinD; Sporulation kinase D K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D I597_1579 glnB; Nitrogen regulatory protein P-II K04751 glnB; nitrogen regulatory protein P-II 1
D I597_2491 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_2492 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I597_2893 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D I597_2681 cph1_10; Phytochrome-like protein cph1 K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D I597_2680 cph1_9; Phytochrome-like protein cph1 K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D I597_2290 ntcA_2; Global nitrogen regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I597_0182 glsA; Thermolabile glutaminase K01425 glsA; glutaminase [EC:3.5.1.2]
D I597_1084 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_0010 bepC_1; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_0278 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_2919 bepC_2; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_2175 Polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D I597_1509 Polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D I597_1577 yfkJ; Low molecular weight protein-tyrosine-phosphatase YfkJ K25307 wzb; low molecular weight protein-tyrosine phosphatase [EC:3.1.3.48]
D I597_2174 ptk; Tyrosine-protein kinase ptk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D I597_1510 ywqD; Tyrosine-protein kinase YwqD K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D I597_0070 engD; Endoglucanase D precursor K01179 E3.2.1.4; endoglucanase [EC:3.2.1.4]
D I597_1878 fec operon regulator FecR K07165 fecR; transmembrane sensor
C 04010 MAPK signaling pathway
C 04013 MAPK signaling pathway - fly
C 04016 MAPK signaling pathway - plant
C 04011 MAPK signaling pathway - yeast
C 04012 ErbB signaling pathway
C 04014 Ras signaling pathway
C 04015 Rap1 signaling pathway
C 04310 Wnt signaling pathway
C 04330 Notch signaling pathway
C 04340 Hedgehog signaling pathway
C 04341 Hedgehog signaling pathway - fly
C 04350 TGF-beta signaling pathway
C 04390 Hippo signaling pathway
C 04391 Hippo signaling pathway - fly
C 04392 Hippo signaling pathway - multiple species
C 04370 VEGF signaling pathway
C 04371 Apelin signaling pathway
C 04630 JAK-STAT signaling pathway
C 04064 NF-kappa B signaling pathway
C 04668 TNF signaling pathway
C 04066 HIF-1 signaling pathway
C 04068 FoxO signaling pathway
C 04020 Calcium signaling pathway
C 04070 Phosphatidylinositol signaling system
C 04072 Phospholipase D signaling pathway
C 04071 Sphingolipid signaling pathway
C 04024 cAMP signaling pathway
C 04022 cGMP-PKG signaling pathway
C 04151 PI3K-Akt signaling pathway
C 04152 AMPK signaling pathway
C 04150 mTOR signaling pathway
C 04075 Plant hormone signal transduction
B
B 09133 Signaling molecules and interaction
C 04080 Neuroactive ligand-receptor interaction
C 04060 Cytokine-cytokine receptor interaction
C 04061 Viral protein interaction with cytokine and cytokine receptor
C 04512 ECM-receptor interaction
C 04514 Cell adhesion molecules
#
A09140 Cellular Processes
B
B 09141 Transport and catabolism
C 04144 Endocytosis
C 04145 Phagosome
C 04142 Lysosome
C 04146 Peroxisome
C 04140 Autophagy - animal
C 04138 Autophagy - yeast
C 04136 Autophagy - other
C 04137 Mitophagy - animal
C 04139 Mitophagy - yeast
C 04148 Efferocytosis
B
B 09143 Cell growth and death
C 04110 Cell cycle
C 04111 Cell cycle - yeast
C 04112 Cell cycle - Caulobacter
C 04113 Meiosis - yeast
C 04114 Oocyte meiosis
C 04210 Apoptosis
C 04214 Apoptosis - fly
C 04215 Apoptosis - multiple species
C 04216 Ferroptosis
C 04217 Necroptosis
C 04115 p53 signaling pathway
C 04218 Cellular senescence
B
B 09144 Cellular community - eukaryotes
C 04510 Focal adhesion
C 04520 Adherens junction
C 04530 Tight junction
C 04540 Gap junction
C 04550 Signaling pathways regulating pluripotency of stem cells
B
B 09145 Cellular community - prokaryotes
C 02024 Quorum sensing [PATH:ddo02024]
D I597_1445 trpE; Anthranilate synthase component 1 K01657 trpE; anthranilate synthase component I [EC:4.1.3.27]
D I597_1444 pabA; Aminodeoxychorismate/anthranilate synthase component 2 K01658 trpG; anthranilate synthase component II [EC:4.1.3.27]
D I597_0981 attM; N-acyl homoserine lactonase AttM K13075 ahlD; N-acyl homoserine lactone hydrolase [EC:3.1.1.81]
D I597_0065 hypothetical protein K20276 bapA; large repetitive protein
D I597_1971 hypothetical protein K20276 bapA; large repetitive protein
D I597_0266 hypothetical protein K20276 bapA; large repetitive protein
D I597_0269 hypothetical protein K20276 bapA; large repetitive protein
D I597_1426 HYR domain protein K20276 bapA; large repetitive protein
D I597_1550 hypothetical protein K20276 bapA; large repetitive protein
D I597_1753 bca; C protein alpha-antigen precursor K20276 bapA; large repetitive protein
D I597_2098 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I597_2290 ntcA_2; Global nitrogen regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I597_0383 ribA; GTP cyclohydrolase-2 K01497 ribA; GTP cyclohydrolase II [EC:3.5.4.25]
D I597_2760 ribD; Riboflavin biosynthesis protein RibD K11752 ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
D I597_0583 lagD; Lactococcin-G-processing and transport ATP-binding protein LagD K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D I597_0582 hlyD; Hemolysin secretion protein D, chromosomal K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D I597_1586 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I597_1546 dppB; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I597_0084 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I597_0539 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I597_1686 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I597_1371 apr; Subtilisin DY K14645 K14645; serine protease [EC:3.4.21.-]
D I597_1386 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D I597_2690 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I597_0029 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I597_1283 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I597_2011 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I597_1502 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I597_1393 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D I597_2413 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
C 05111 Biofilm formation - Vibrio cholerae
C 02025 Biofilm formation - Pseudomonas aeruginosa
C 02026 Biofilm formation - Escherichia coli
B
B 09142 Cell motility
C 02030 Bacterial chemotaxis [PATH:ddo02030]
D I597_2681 cph1_10; Phytochrome-like protein cph1 K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D I597_0313 motB_1; Motility protein B K02557 motB; chemotaxis protein MotB
D I597_0412 yiaD_1; putative lipoprotein YiaD precursor K02557 motB; chemotaxis protein MotB
D I597_2452 motB_2; Motility protein B K02557 motB; chemotaxis protein MotB
C 02040 Flagellar assembly [PATH:ddo02040]
D I597_0313 motB_1; Motility protein B K02557 motB; chemotaxis protein MotB
D I597_0412 yiaD_1; putative lipoprotein YiaD precursor K02557 motB; chemotaxis protein MotB
D I597_2452 motB_2; Motility protein B K02557 motB; chemotaxis protein MotB
D I597_2110 sigA_2; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D I597_1368 sigA_1; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D I597_2893 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
C 04814 Motor proteins
C 04820 Cytoskeleton in muscle cells
D I597_1292 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
C 04810 Regulation of actin cytoskeleton
#
A09150 Organismal Systems
B
B 09151 Immune system
C 04640 Hematopoietic cell lineage
C 04610 Complement and coagulation cascades
C 04611 Platelet activation
C 04613 Neutrophil extracellular trap formation
C 04620 Toll-like receptor signaling pathway
C 04624 Toll and Imd signaling pathway
C 04621 NOD-like receptor signaling pathway
C 04622 RIG-I-like receptor signaling pathway
C 04623 Cytosolic DNA-sensing pathway
C 04625 C-type lectin receptor signaling pathway
C 04650 Natural killer cell mediated cytotoxicity
C 04612 Antigen processing and presentation
C 04660 T cell receptor signaling pathway
C 04658 Th1 and Th2 cell differentiation
C 04659 Th17 cell differentiation
C 04657 IL-17 signaling pathway
C 04662 B cell receptor signaling pathway
C 04664 Fc epsilon RI signaling pathway
C 04666 Fc gamma R-mediated phagocytosis
C 04670 Leukocyte transendothelial migration
C 04672 Intestinal immune network for IgA production
C 04062 Chemokine signaling pathway
B
B 09152 Endocrine system
C 04911 Insulin secretion
C 04910 Insulin signaling pathway
C 04922 Glucagon signaling pathway
C 04923 Regulation of lipolysis in adipocytes
C 04920 Adipocytokine signaling pathway
C 03320 PPAR signaling pathway
C 04929 GnRH secretion
C 04912 GnRH signaling pathway
C 04913 Ovarian steroidogenesis
C 04915 Estrogen signaling pathway
C 04914 Progesterone-mediated oocyte maturation
C 04917 Prolactin signaling pathway
C 04921 Oxytocin signaling pathway
C 04926 Relaxin signaling pathway
C 04935 Growth hormone synthesis, secretion and action
C 04918 Thyroid hormone synthesis
C 04919 Thyroid hormone signaling pathway
C 04928 Parathyroid hormone synthesis, secretion and action
C 04916 Melanogenesis
C 04924 Renin secretion
C 04614 Renin-angiotensin system
C 04925 Aldosterone synthesis and secretion
C 04927 Cortisol synthesis and secretion
B
B 09153 Circulatory system
C 04260 Cardiac muscle contraction
C 04261 Adrenergic signaling in cardiomyocytes
C 04270 Vascular smooth muscle contraction
B
B 09154 Digestive system
C 04970 Salivary secretion
C 04971 Gastric acid secretion
C 04972 Pancreatic secretion
C 04976 Bile secretion
C 04973 Carbohydrate digestion and absorption
C 04974 Protein digestion and absorption
C 04975 Fat digestion and absorption
C 04979 Cholesterol metabolism
C 04977 Vitamin digestion and absorption
C 04980 Cobalamin transport and metabolism [PATH:ddo04980]
D I597_1504 yvqK; Cob(I)yrinic acid a,c-diamide adenosyltransferase K00798 MMAB; cob(I)alamin adenosyltransferase [EC:2.5.1.17]
D I597_1495 putative GTPase K07588 MMAA; GTPase [EC:3.6.5.-]
D I597_0331 mutB; Methylmalonyl-CoA mutase large subunit K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I597_0333 scpA_1; Methylmalonyl-CoA mutase K01847 MUT; methylmalonyl-CoA mutase [EC:5.4.99.2]
D I597_0215 metH_1; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
D I597_0216 metH_2; Methionine synthase K00548 metH; 5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
C 04978 Mineral absorption
B
B 09155 Excretory system
C 04962 Vasopressin-regulated water reabsorption
C 04960 Aldosterone-regulated sodium reabsorption
C 04961 Endocrine and other factor-regulated calcium reabsorption
C 04964 Proximal tubule bicarbonate reclamation
C 04966 Collecting duct acid secretion
B
B 09156 Nervous system
C 04724 Glutamatergic synapse
C 04727 GABAergic synapse
C 04725 Cholinergic synapse
C 04728 Dopaminergic synapse
C 04726 Serotonergic synapse
C 04720 Long-term potentiation
C 04730 Long-term depression
C 04723 Retrograde endocannabinoid signaling
C 04721 Synaptic vesicle cycle
C 04722 Neurotrophin signaling pathway
B
B 09157 Sensory system
C 04744 Phototransduction
C 04745 Phototransduction - fly
C 04740 Olfactory transduction
C 04742 Taste transduction
C 04750 Inflammatory mediator regulation of TRP channels
B
B 09158 Development and regeneration
C 04320 Dorso-ventral axis formation
C 04360 Axon guidance
C 04361 Axon regeneration
C 04380 Osteoclast differentiation
B
B 09149 Aging
C 04211 Longevity regulating pathway
C 04212 Longevity regulating pathway - worm
C 04213 Longevity regulating pathway - multiple species
B
B 09159 Environmental adaptation
C 04710 Circadian rhythm
C 04713 Circadian entrainment
C 04711 Circadian rhythm - fly
C 04712 Circadian rhythm - plant
C 04714 Thermogenesis
C 04626 Plant-pathogen interaction
#
A09160 Human Diseases
B
B 09161 Cancer: overview
C 05200 Pathways in cancer
C 05202 Transcriptional misregulation in cancer
C 05206 MicroRNAs in cancer
C 05205 Proteoglycans in cancer
C 05204 Chemical carcinogenesis - DNA adducts
C 05207 Chemical carcinogenesis - receptor activation
C 05208 Chemical carcinogenesis - reactive oxygen species
C 05203 Viral carcinogenesis
C 05230 Central carbon metabolism in cancer
C 05231 Choline metabolism in cancer
C 05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
B
B 09162 Cancer: specific types
C 05210 Colorectal cancer
C 05212 Pancreatic cancer
C 05225 Hepatocellular carcinoma
C 05226 Gastric cancer
C 05214 Glioma
C 05216 Thyroid cancer
C 05221 Acute myeloid leukemia
C 05220 Chronic myeloid leukemia
C 05217 Basal cell carcinoma
C 05218 Melanoma
C 05211 Renal cell carcinoma
C 05219 Bladder cancer
C 05215 Prostate cancer
C 05213 Endometrial cancer
C 05224 Breast cancer
C 05222 Small cell lung cancer
C 05223 Non-small cell lung cancer
B
B 09172 Infectious disease: viral
C 05166 Human T-cell leukemia virus 1 infection
C 05170 Human immunodeficiency virus 1 infection
C 05161 Hepatitis B
C 05160 Hepatitis C
C 05171 Coronavirus disease - COVID-19
C 05164 Influenza A
C 05162 Measles
C 05168 Herpes simplex virus 1 infection
C 05163 Human cytomegalovirus infection
C 05167 Kaposi sarcoma-associated herpesvirus infection
C 05169 Epstein-Barr virus infection
C 05165 Human papillomavirus infection
B
B 09171 Infectious disease: bacterial
C 05110 Vibrio cholerae infection
C 05120 Epithelial cell signaling in Helicobacter pylori infection
C 05130 Pathogenic Escherichia coli infection
C 05132 Salmonella infection
C 05131 Shigellosis
C 05135 Yersinia infection
C 05133 Pertussis
C 05134 Legionellosis
C 05150 Staphylococcus aureus infection
C 05152 Tuberculosis
C 05100 Bacterial invasion of epithelial cells
B
B 09174 Infectious disease: parasitic
C 05146 Amoebiasis
C 05144 Malaria
C 05145 Toxoplasmosis
C 05140 Leishmaniasis
C 05142 Chagas disease
C 05143 African trypanosomiasis
B
B 09163 Immune disease
C 05310 Asthma
C 05322 Systemic lupus erythematosus
C 05323 Rheumatoid arthritis
C 05320 Autoimmune thyroid disease
C 05321 Inflammatory bowel disease
C 05330 Allograft rejection
C 05332 Graft-versus-host disease
C 05340 Primary immunodeficiency
B
B 09164 Neurodegenerative disease
C 05010 Alzheimer disease
C 05012 Parkinson disease
C 05014 Amyotrophic lateral sclerosis
C 05016 Huntington disease
C 05017 Spinocerebellar ataxia
C 05020 Prion disease
C 05022 Pathways of neurodegeneration - multiple diseases
B
B 09165 Substance dependence
C 05030 Cocaine addiction
C 05031 Amphetamine addiction
C 05032 Morphine addiction
C 05033 Nicotine addiction
C 05034 Alcoholism
B
B 09166 Cardiovascular disease
C 05417 Lipid and atherosclerosis
C 05418 Fluid shear stress and atherosclerosis
C 05410 Hypertrophic cardiomyopathy
C 05412 Arrhythmogenic right ventricular cardiomyopathy
C 05414 Dilated cardiomyopathy
C 05415 Diabetic cardiomyopathy
C 05416 Viral myocarditis
B
B 09167 Endocrine and metabolic disease
C 04930 Type II diabetes mellitus
C 04940 Type I diabetes mellitus
C 04950 Maturity onset diabetes of the young
C 04936 Alcoholic liver disease
C 04932 Non-alcoholic fatty liver disease
C 04931 Insulin resistance
C 04933 AGE-RAGE signaling pathway in diabetic complications
C 04934 Cushing syndrome
B
B 09175 Drug resistance: antimicrobial
C 01501 beta-Lactam resistance [PATH:ddo01501]
D I597_2439 ybbD; putative lipoprotein YbbD precursor K01207 nagZ; beta-N-acetylhexosaminidase [EC:3.2.1.52]
D I597_2055 BlaR1 peptidase M56 K02172 blaR1; bla regulator protein blaR1
D I597_0869 blaR1; Regulatory protein BlaR1 K02172 blaR1; bla regulator protein blaR1
D I597_0889 BlaR1 peptidase M56 K02172 blaR1; bla regulator protein blaR1
D I597_0870 BlaR1 peptidase M56 K02172 blaR1; bla regulator protein blaR1
D I597_2056 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I597_0868 blaI; Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I597_0890 mecI; Methicillin resistance regulatory protein MecI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I597_2226 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D I597_1084 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_0010 bepC_1; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_0278 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_2919 bepC_2; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_0543 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D I597_0049 spoVD_1; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D I597_1320 spoVD_2; Stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D I597_1670 Beta-lactamase IMP-1 precursor K17837 bla2; metallo-beta-lactamase class B [EC:3.5.2.6]
C 01502 Vancomycin resistance [PATH:ddo01502]
D I597_2426 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D I597_1433 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I597_0766 vanT; Serine/alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D I597_1189 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase K01929 murF; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:6.3.2.10]
D I597_1322 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D I597_1325 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
C 01503 Cationic antimicrobial peptide (CAMP) resistance [PATH:ddo01503]
D I597_2446 amiA; N-acetylmuramoyl-L-alanine amidase AmiA precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D I597_2525 degP; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D I597_2511 ppiB_2; putative peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D I597_1084 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_0010 bepC_1; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_0278 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_2919 bepC_2; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_1982 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
B
B 09176 Drug resistance: antineoplastic
C 01521 EGFR tyrosine kinase inhibitor resistance
C 01524 Platinum drug resistance
C 01523 Antifolate resistance
C 01522 Endocrine resistance
#
A09180 Brite Hierarchies
B
B 09181 Protein families: metabolism
C 01000 Enzymes [BR:ddo01000]
C 01001 Protein kinases [BR:ddo01001]
D I597_1432 PASTA domain protein K12132 prkC; eukaryotic-like serine/threonine-protein kinase [EC:2.7.11.1]
D I597_1475 putative DNA-binding transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D I597_2174 ptk; Tyrosine-protein kinase ptk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D I597_1510 ywqD; Tyrosine-protein kinase YwqD K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D I597_2740 phoR_2; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I597_0957 phoR_1; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I597_0177 nreB; Oxygen sensor histidine kinase NreB K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D I597_0793 kinD; Sporulation kinase D K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D I597_2713 ypdA_3; Sensor histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D I597_0311 ypdA_1; Sensor histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D I597_0351 ypdA_2; Sensor histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D I597_2680 cph1_9; Phytochrome-like protein cph1 K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D I597_0573 rcsC; Sensor histidine kinase RcsC K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 01009 Protein phosphatases and associated proteins [BR:ddo01009]
D I597_0827 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D I597_2253 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I597_2520 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 01002 Peptidases and inhibitors [BR:ddo01002]
D I597_0561 lipoprotein signal peptidase K03101 lspA; signal peptidase II [EC:3.4.23.36]
D I597_1595 Peptidase C1-like family protein K01372 BLMH; bleomycin hydrolase [EC:3.4.22.40]
D I597_2404 guaA; GMP synthase K01951 guaA; GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
D I597_0583 lagD; Lactococcin-G-processing and transport ATP-binding protein LagD K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D I597_2090 ykfC; Gamma-D-glutamyl-L-lysine endopeptidase K20742 ykfC; gamma-D-glutamyl-L-lysine dipeptidyl-peptidase [EC:3.4.14.13]
D I597_0089 mepS; Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase precursor K13695 nlpC; probable lipoprotein NlpC
D I597_0585 purF; Amidophosphoribosyltransferase precursor K00764 purF; amidophosphoribosyltransferase [EC:2.4.2.14]
D I597_1581 gltB_1; Ferredoxin-dependent glutamate synthase 1 K00265 gltB; glutamate synthase (NADPH) large chain [EC:1.4.1.13]
D I597_0402 glmS; Glutamine--fructose-6-phosphate aminotransferase K00820 glmS; glutamine---fructose-6-phosphate transaminase (isomerizing) [EC:2.6.1.16]
D I597_2856 asnB; Asparagine synthetase B K01953 asnB; asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]
D I597_1895 yfkM; General stress protein 18 K05520 yhbO; deglycase [EC:3.5.1.124]
D I597_0581 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D I597_2638 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D I597_1178 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D I597_2558 CAAX amino terminal protease self-immunity K07052 K07052; CAAX protease family protein
D I597_2333 pepN_2; Aminopeptidase N K01256 pepN; aminopeptidase N [EC:3.4.11.2]
D I597_2145 pepO_2; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D I597_0740 pepO_1; Neutral endopeptidase K07386 pepO; putative endopeptidase [EC:3.4.24.-]
D I597_2099 cpt; Carboxypeptidase T precursor K05996 cpt; carboxypeptidase T [EC:3.4.17.18]
D I597_2426 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D I597_0053 ptrA_1; Protease 3 precursor K07263 pqqL; zinc protease [EC:3.4.24.-]
D I597_1805 ptrA_2; Protease 3 precursor K07263 pqqL; zinc protease [EC:3.4.24.-]
D I597_2207 Peptidase M16 inactive domain protein K07263 pqqL; zinc protease [EC:3.4.24.-]
D I597_2208 ptrA_3; Protease 3 precursor K07263 pqqL; zinc protease [EC:3.4.24.-]
D I597_2157 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D I597_0813 cpg2; Carboxypeptidase G2 precursor K01295 cpg; glutamate carboxypeptidase [EC:3.4.17.11]
D I597_2276 pepT; Peptidase T K01258 pepT; tripeptide aminopeptidase [EC:3.4.11.4]
D I597_1553 pepD; Cytosol non-specific dipeptidase K01270 pepD; dipeptidase D [EC:3.4.13.-]
D I597_1653 abgB; p-aminobenzoyl-glutamate hydrolase subunit B K12941 abgB; aminobenzoyl-glutamate utilization protein B
D I597_0197 map; Methionine aminopeptidase 1 K01265 map; methionyl aminopeptidase [EC:3.4.11.18]
D I597_1405 pepP_2; Xaa-Pro aminopeptidase K01271 pepQ; Xaa-Pro dipeptidase [EC:3.4.13.9]
D I597_1000 pepP_1; Xaa-Pro aminopeptidase K01262 pepP; Xaa-Pro aminopeptidase [EC:3.4.11.9]
D I597_2241 ywaD; Aminopeptidase YwaD precursor K01302 CPQ; carboxypeptidase Q [EC:3.4.17.-]
D I597_1013 vpr; Minor extracellular protease vpr precursor K01417 MEP; extracellular elastinolytic metalloproteinase [EC:3.4.24.-]
D I597_0538 chiA1; Chitinase A1 precursor K01417 MEP; extracellular elastinolytic metalloproteinase [EC:3.4.24.-]
D I597_2880 ftsH3; ATP-dependent zinc metalloprotease FtsH 3 K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D I597_2396 Peptidase family M49 K01277 DPP3; dipeptidyl-peptidase III [EC:3.4.14.4]
D I597_0863 Putative zinc metalloprotease K11749 rseP; regulator of sigma E protease [EC:3.4.24.-]
D I597_2055 BlaR1 peptidase M56 K02172 blaR1; bla regulator protein blaR1
D I597_0869 blaR1; Regulatory protein BlaR1 K02172 blaR1; bla regulator protein blaR1
D I597_0889 BlaR1 peptidase M56 K02172 blaR1; bla regulator protein blaR1
D I597_0870 BlaR1 peptidase M56 K02172 blaR1; bla regulator protein blaR1
D I597_0103 mtfA; Protein MtfA K09933 mtfA; MtfA peptidase
D I597_2525 degP; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D I597_0598 Thermophilic serine proteinase precursor K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D I597_1371 apr; Subtilisin DY K14645 K14645; serine protease [EC:3.4.21.-]
D I597_2392 aprN; Subtilisin NAT precursor K17734 aprX; serine protease AprX [EC:3.4.21.-]
D I597_0771 Prolyl endopeptidase K01322 PREP; prolyl oligopeptidase [EC:3.4.21.26]
D I597_0093 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D I597_1695 ptrB; Protease 2 K01354 ptrB; oligopeptidase B [EC:3.4.21.83]
D I597_0295 clpP_1; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D I597_0820 clpP_2; ATP-dependent Clp protease proteolytic subunit K01358 clpP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]
D I597_2614 lon2; Lon protease 2 K01338 lon; ATP-dependent Lon protease [EC:3.4.21.53]
D I597_0604 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D I597_2785 lepB; Signal peptidase I K03100 lepB; signal peptidase I [EC:3.4.21.89]
D I597_0435 ctpB; Carboxy-terminal processing protease CtpB precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D I597_0607 putative CtpA-like serine protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D I597_0085 prc; Tail-specific protease precursor K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D I597_2365 putative CtpA-like serine protease K03797 E3.4.21.102; carboxyl-terminal processing protease [EC:3.4.21.102]
D I597_1233 pepE; Peptidase E K05995 pepE; dipeptidase E [EC:3.4.13.21]
D I597_2788 Rhomboid family protein K07059 K07059; rhomboid family protein
D I597_0485 ykfA; putative murein peptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D I597_0734 iaaA; Isoaspartyl peptidase precursor K13051 ASRGL1; L-asparaginase / beta-aspartyl-peptidase [EC:3.5.1.1 3.4.19.5]
D I597_2223 ggt; Gamma-glutamyltranspeptidase precursor K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase [EC:2.3.2.2 3.4.19.13]
D I597_1455 protease TldD K03568 tldD; TldD protein
D I597_0879 hypothetical protein K06894 yfhM; alpha-2-macroglobulin
C 01003 Glycosyltransferases [BR:ddo01003]
D I597_1866 arnC_3; Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase K00729 ALG5; dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117]
D I597_0948 Undecaprenyl-phosphate mannosyltransferase K00721 DPM1; dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
D I597_2649 pgaC; Poly-beta-1,6-N-acetyl-D-glucosamine synthase K00752 hasA; hyaluronan synthase [EC:2.4.1.212]
D I597_1529 Glycogen synthase K16150 K16150; glycogen synthase [EC:2.4.1.11]
D I597_0404 glgA_1; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D I597_2627 glgA_2; Glycogen synthase K00703 glgA; starch synthase [EC:2.4.1.21]
D I597_0880 pbpD; Penicillin-binding protein 4 precursor K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D I597_0543 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D I597_2178 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
D I597_1024 hypothetical protein K14337 mptA; alpha-1,6-mannosyltransferase [EC:2.4.1.-]
C 01005 Lipopolysaccharide biosynthesis proteins [BR:ddo01005]
D I597_1982 lpxA; Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase K00677 lpxA; UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]
D I597_0088 lpxB; Lipid-A-disaccharide synthase K00748 lpxB; lipid-A-disaccharide synthase [EC:2.4.1.182]
D I597_1981 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D I597_1980 lpxD_1; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D I597_1984 lpxD_2; UDP-3-O-acylglucosamine N-acyltransferase K02536 lpxD; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase [EC:2.3.1.191]
D I597_0553 lpxH_1; UDP-2,3-diacylglucosamine hydrolase K03269 lpxH; UDP-2,3-diacylglucosamine hydrolase [EC:3.6.1.54]
D I597_2886 lpxK; Tetraacyldisaccharide 4'-kinase K00912 lpxK; tetraacyldisaccharide 4'-kinase [EC:2.7.1.130]
D I597_2219 htrB; Lipid A biosynthesis lauroyl acyltransferase K02517 lpxL; Kdo2-lipid IVA lauroyltransferase/acyltransferase [EC:2.3.1.241 2.3.1.-]
D I597_0024 hypothetical protein K09953 lpxR; lipid A 3-O-deacylase [EC:3.1.1.-]
D I597_0261 waaA; 3-deoxy-D-manno-octulosonic acid transferase K02527 kdtA; 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15]
D I597_2892 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase K01627 kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55]
D I597_2200 kpsU; 3-deoxy-manno-octulosonate cytidylyltransferase K00979 kdsB; 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
D I597_1799 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC K03270 kdsC; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) [EC:3.1.3.45]
D I597_2705 kdsD; Arabinose 5-phosphate isomerase KdsD K06041 kdsD; arabinose-5-phosphate isomerase [EC:5.3.1.13]
D I597_0646 O-Antigen ligase K02847 waaL; O-antigen ligase [EC:2.4.99.26]
D I597_2178 tagO; putative undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase K02851 wecA; UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase [EC:2.7.8.33 2.7.8.35]
C 01011 Peptidoglycan biosynthesis and degradation proteins [BR:ddo01011]
D I597_1645 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase K00790 murA; UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7]
D I597_2872 murB; UDP-N-acetylenolpyruvoylglucosamine reductase K00075 murB; UDP-N-acetylmuramate dehydrogenase [EC:1.3.1.98]
D I597_1326 murC; UDP-N-acetylmuramate--L-alanine ligase K01924 murC; UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8]
D I597_1323 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase K01925 murD; UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
D I597_1321 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--LD-lysine ligase K01928 murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
D I597_1433 ddlB; D-alanine--D-alanine ligase B K01921 ddl; D-alanine-D-alanine ligase [EC:6.3.2.4]
D I597_0766 vanT; Serine/alanine racemase K01775 alr; alanine racemase [EC:5.1.1.1]
D I597_0309 murI; Glutamate racemase K01776 murI; glutamate racemase [EC:5.1.1.3]
D I597_0485 ykfA; putative murein peptide carboxypeptidase K01297 ldcA; muramoyltetrapeptide carboxypeptidase [EC:3.4.17.13]
D I597_1322 mraY; Phospho-N-acetylmuramoyl-pentapeptide-transferase K01000 mraY; phospho-N-acetylmuramoyl-pentapeptide-transferase [EC:2.7.8.13]
D I597_1325 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase K02563 murG; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]
D I597_0714 uppP; Undecaprenyl-diphosphatase K06153 bacA; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I597_1493 undecaprenyl pyrophosphate phosphatase K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I597_1370 phosphatidylglycerophosphatase B K19302 bcrC; undecaprenyl-diphosphatase [EC:3.6.1.27]
D I597_0543 mrcA; Penicillin-binding protein 1A K05366 mrcA; penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
D I597_0880 pbpD; Penicillin-binding protein 4 precursor K05367 pbpC; penicillin-binding protein 1C [EC:2.4.99.28]
D I597_0049 spoVD_1; Stage V sporulation protein D K05515 mrdA; penicillin-binding protein 2 [EC:3.4.16.4]
D I597_1320 spoVD_2; Stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D I597_2426 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D I597_0633 mltD_1; Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D I597_2499 mltD_2; Membrane-bound lytic murein transglycosylase D precursor K08307 mltD; peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
D I597_2522 putative aminodeoxychorismate lyase K07082 mltG; peptidoglycan lytic transglycosylase G [EC:4.2.2.29]
D I597_2446 amiA; N-acetylmuramoyl-L-alanine amidase AmiA precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
C 01004 Lipid biosynthesis proteins [BR:ddo01004]
D I597_0256 fabD; Malonyl CoA-acyl carrier protein transacylase K00645 fabD; [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
D I597_0138 fabH_1; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I597_1206 fabH_2; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I597_2509 fabH_3; 3-oxoacyl-[acyl-carrier-protein] synthase 3 K00648 fabH; 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
D I597_0575 fabF_2; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I597_1948 fabF_3; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I597_0391 fabF_1; 3-oxoacyl-[acyl-carrier-protein] synthase 2 K09458 fabF; 3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]
D I597_1988 fabG_2; 3-oxoacyl-[acyl-carrier-protein] reductase FabG K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1375 gno_2; Gluconate 5-dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1655 linC; 2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase K00059 fabG; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
D I597_1947 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ K02372 fabZ; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]
D I597_1981 lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase K16363 lpxC-fabZ; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:3.5.1.108 4.2.1.59]
D I597_2744 fabI; Enoyl-[acyl-carrier-protein] reductase [NADH] FabI K00208 fabI; enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]
D I597_2391 Nitronate monooxygenase K02371 fabK; enoyl-[acyl-carrier protein] reductase II [EC:1.3.1.9]
D I597_1946 fabL; Enoyl-[acyl-carrier-protein] reductase [NADPH] FabL K10780 fabL; enoyl-[acyl-carrier protein] reductase III [EC:1.3.1.104]
D I597_2137 Fatty acid desaturase K00507 SCD; stearoyl-CoA desaturase (Delta-9 desaturase) [EC:1.14.19.1]
D I597_1302 desA3; Stearoyl-CoA 9-desaturase K00508 E1.14.19.3; linoleoyl-CoA desaturase [EC:1.14.19.3]
D I597_0378 acsA; Acetyl-coenzyme A synthetase K01895 ACSS1_2; acetyl-CoA synthetase [EC:6.2.1.1]
D I597_2098 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I597_0550 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655 plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]
C 01008 Polyketide biosynthesis proteins [BR:ddo01008]
D I597_1068 cphA; Beta-lactamase precursor K05555 actIV; cyclase [EC:4.-.-.-]
D I597_1945 Polyketide synthase-like Pks10 K16167 bpsA; alkylresorcinol/alkylpyrone synthase
D I597_0929 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
D I597_0931 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
D I597_1183 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
D I597_1250 FG-GAP repeat protein K21162 sgcE4; enediyne biosynthesis protein E4
C 01006 Prenyltransferases [BR:ddo01006]
D I597_0280 (2E,6E)-farnesyl diphosphate synthase K13789 GGPS; geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]
D I597_2813 sdsA; All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) K02523 ispB; octaprenyl-diphosphate synthase [EC:2.5.1.90]
D I597_0305 ispU; Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) K00806 uppS; undecaprenyl diphosphate synthase [EC:2.5.1.31]
D I597_1409 crtB; All-trans-phytoene synthase K02291 crtB; 15-cis-phytoene synthase [EC:2.5.1.32]
D I597_2738 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D I597_1638 menA; 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase [EC:2.5.1.74]
D I597_1069 ctaB1; Protoheme IX farnesyltransferase 1 K02257 COX10; heme o synthase [EC:2.5.1.141]
C 01007 Amino acid related enzymes [BR:ddo01007]
D I597_0624 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I597_0618 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D I597_0952 tyrS1; Tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I597_0551 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D I597_2716 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D I597_2797 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I597_0482 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D I597_0558 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D I597_2875 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D I597_0825 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I597_1137 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D I597_0944 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I597_0170 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D I597_1922 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D I597_0417 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D I597_0465 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D I597_1633 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D I597_0061 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D I597_1097 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D I597_0774 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D I597_2336 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D I597_2873 aspC; Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_1301 Aspartate aminotransferase K00812 aspB; aspartate aminotransferase [EC:2.6.1.1]
D I597_0428 ybdL; Methionine aminotransferase K14287 ybdL; methionine transaminase [EC:2.6.1.88]
D I597_2831 dapL; LL-diaminopimelate aminotransferase K10206 E2.6.1.83; LL-diaminopimelate aminotransferase [EC:2.6.1.83]
D I597_1996 hisC; Histidinol-phosphate aminotransferase K00817 hisC; histidinol-phosphate aminotransferase [EC:2.6.1.9]
D I597_0589 kbl; 2-amino-3-ketobutyrate coenzyme A ligase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D I597_1697 Putative pyridoxal phosphate-dependent acyltransferase K00639 kbl; glycine C-acetyltransferase [EC:2.3.1.29]
D I597_0395 bioF; 8-amino-7-oxononanoate synthase K00652 bioF; 8-amino-7-oxononanoate synthase [EC:2.3.1.47]
D I597_1617 rocD2; Ornithine aminotransferase 2 K00819 rocD; ornithine--oxo-acid transaminase [EC:2.6.1.13]
D I597_1159 argD_1; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D I597_2378 argD_2; Acetylornithine aminotransferase K00821 argD; acetylornithine/N-succinyldiaminopimelate aminotransferase [EC:2.6.1.11 2.6.1.17]
D I597_0393 bioA; Adenosylmethionine-8-amino-7-oxononanoate aminotransferase K00833 bioA; adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:2.6.1.62]
D I597_1127 hemL; Glutamate-1-semialdehyde 2,1-aminomutase K01845 hemL; glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]
D I597_0190 ilvE; putative branched-chain-amino-acid aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_1120 ilvK; Branched-chain-amino-acid aminotransferase 2 K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_2641 dat; D-alanine aminotransferase K00826 E2.6.1.42; branched-chain amino acid aminotransferase [EC:2.6.1.42]
D I597_2816 Soluble hydrogenase 42 kDa subunit K00830 AGXT; alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]
D I597_2317 serC; Phosphoserine aminotransferase K00831 serC; phosphoserine aminotransferase [EC:2.6.1.52]
D I597_0262 wbpE; UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase K13017 wbpE; UDP-2-acetamido-2-deoxy-ribo-hexuluronate aminotransferase [EC:2.6.1.98]
C 00199 Cytochrome P450
C 00194 Photosynthesis proteins [BR:ddo00194]
D I597_0400 F0F1 ATP synthase subunit epsilon K02114 ATPF1E; F-type H+-transporting ATPase subunit epsilon
D I597_0401 atpD; ATP synthase subunit beta K02112 ATPF1B; F-type H+/Na+-transporting ATPase subunit beta [EC:7.1.2.2 7.2.2.1]
D I597_0678 atpG; ATP synthase gamma chain K02115 ATPF1G; F-type H+-transporting ATPase subunit gamma
D I597_0677 atpA; ATP synthase subunit alpha K02111 ATPF1A; F-type H+/Na+-transporting ATPase subunit alpha [EC:7.1.2.2 7.2.2.1]
D I597_0676 atpH; ATP synthase subunit delta K02113 ATPF1D; F-type H+-transporting ATPase subunit delta
D I597_0675 atpF; ATP synthase subunit b K02109 ATPF0B; F-type H+-transporting ATPase subunit b
D I597_0674 atpE; ATP synthase subunit c K02110 ATPF0C; F-type H+-transporting ATPase subunit c
D I597_0673 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
B
B 09182 Protein families: genetic information processing
C 03000 Transcription factors [BR:ddo03000]
D I597_2848 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I597_2676 pchR_2; Regulatory protein PchR K12243 pchR; AraC family transcriptional regulator, transcriptional activator of the genes for pyochelin and ferripyochelin receptors
D I597_1333 araC_1; Arabinose operon regulatory protein K18954 pobR; AraC family transcriptional regulator, transcriptional activator of pobA
D I597_0679 Uncharacterized protein K19693 tfoS; AraC family transcriptional regulator, chitin signaling transcriptional activator
D I597_1294 Bacterial transcription activator, effector binding domain K13653 K13653; AraC family transcriptional regulator
D I597_1789 oxyR; Hydrogen peroxide-inducible gene activator K04761 oxyR; LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
D I597_0922 cytR; HTH-type transcriptional repressor CytR K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D I597_1873 ccpA; Catabolite control protein A K02529 galR; LacI family transcriptional regulator, galactose operon repressor
D I597_0897 lutR; HTH-type transcriptional regulator LutR K05799 pdhR; GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
D I597_2854 comR; HTH-type transcriptional repressor ComR K16137 nemR; TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
D I597_0831 asnC_1; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D I597_1742 asnC_2; Regulatory protein AsnC K03718 asnC; Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA
D I597_2406 lrp_2; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D I597_2559 lrp_3; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D I597_1118 lrp_1; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D I597_2231 sarZ; HTH-type transcriptional regulator SarZ K23775 ohrR; MarR family transcriptional regulator, organic hydroperoxide resistance regulator
D I597_1411 ycgE_2; HTH-type transcriptional repressor YcgE K22491 litR; MerR family transcriptional regulator, light-induced transcriptional regulator
D I597_2495 fur; Ferric uptake regulation protein K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D I597_1819 zinc uptake transcriptional repressor K03711 fur; Fur family transcriptional regulator, ferric uptake regulator
D I597_2290 ntcA_2; Global nitrogen regulator K10914 crp; CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
D I597_1355 ntcA_1; Global nitrogen regulator K01420 fnr; CRP/FNR family transcriptional regulator, anaerobic regulatory protein
D I597_0907 czrA; HTH-type transcriptional repressor CzrA K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D I597_0452 putative HTH-type transcriptional regulator K03892 arsR; ArsR family transcriptional regulator, arsenate/arsenite/antimonite-responsive transcriptional repressor
D I597_2819 Helix-turn-helix domain protein K21686 prpR; XRE family transcriptional regulator, fatty acid utilization regulator
D I597_2766 Transcriptional regulator PadR-like family protein K10947 K10947; PadR family transcriptional regulator
D I597_0853 ideR; Iron-dependent repressor IdeR K03709 troR; DtxR family transcriptional regulator, Mn-dependent transcriptional regulator
D I597_2056 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I597_0868 blaI; Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I597_0890 mecI; Methicillin resistance regulatory protein MecI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I597_2882 birA; Bifunctional ligase/repressor BirA K03524 birA; BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15]
D I597_0399 hypothetical protein K07727 K07727; putative transcriptional regulator
D I597_1774 hypothetical protein K07729 K07729; putative transcriptional regulator
D I597_2782 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I597_1416 pyrR_1; Bifunctional protein PyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D I597_2269 pyrR_2; Bifunctional protein pyrR K02825 pyrR; pyrimidine operon attenuation protein / uracil phosphoribosyltransferase [EC:2.4.2.9]
D I597_1380 paiB; Protease synthase and sporulation protein PAI 2 K07734 paiB; transcriptional regulator
D I597_2640 hypothetical protein K07735 algH; putative transcriptional regulator
D I597_0559 yocK; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D I597_1317 cell division protein MraZ K03925 mraZ; transcriptional regulator MraZ
C 03021 Transcription machinery [BR:ddo03021]
D I597_1288 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D I597_2684 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D I597_2683 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D I597_2110 sigA_2; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D I597_1368 sigA_1; RNA polymerase sigma factor SigA K03086 rpoD; RNA polymerase primary sigma factor
D I597_1781 rpoE_1; ECF RNA polymerase sigma-E factor K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I597_2870 rpoE_4; ECF RNA polymerase sigma factor RpoE K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I597_1360 sigK; ECF RNA polymerase sigma factor SigK K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I597_2866 sigW_4; ECF RNA polymerase sigma factor SigW K03088 rpoE; RNA polymerase sigma-70 factor, ECF subfamily
D I597_2893 rpoN; RNA polymerase sigma-54 factor K03092 rpoN; RNA polymerase sigma-54 factor
D I597_1040 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D I597_2009 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D I597_2689 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D I597_0559 yocK; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D I597_0798 greA_1; Transcription elongation factor GreA K03624 greA; transcription elongation factor GreA
D I597_1729 hypothetical protein K03628 rho; transcription termination factor Rho
C 03019 Messenger RNA biogenesis [BR:ddo03019]
D I597_0845 rng; Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D I597_0574 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D I597_1154 rny; Ribonuclease Y K18682 rny; ribonucrease Y [EC:3.1.-.-]
D I597_0612 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D I597_1669 rhlE_1; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D I597_1676 rhlE_2; ATP-dependent RNA helicase RhlE K11927 rhlE; ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
D I597_2030 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I597_2143 rhlE_3; ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I597_2704 recQ_3; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I597_0381 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I597_1641 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I597_1292 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I597_2836 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
D I597_1729 hypothetical protein K03628 rho; transcription termination factor Rho
D I597_2253 pfkA; 6-phosphofructokinase isozyme 1 K00850 pfkA; 6-phosphofructokinase 1 [EC:2.7.1.11]
D I597_2506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I597_0032 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I597_1933 ppk_1; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D I597_2262 ppk_2; Polyphosphate kinase K00937 ppk1; polyphosphate kinase [EC:2.7.4.1]
D I597_1672 cca; Multifunctional CCA protein K00970 pcnB; poly(A) polymerase [EC:2.7.7.19]
C 03041 Spliceosome
C 03011 Ribosome [BR:ddo03011]
D I597_2602 rpsA_2; 30S ribosomal protein S1 K02945 RP-S1; small subunit ribosomal protein S1
D I597_0162 rpsB; 30S ribosomal protein S2 K02967 RP-S2; small subunit ribosomal protein S2
D I597_1269 rpsC; 30S ribosomal protein S3 K02982 RP-S3; small subunit ribosomal protein S3
D I597_1287 rpsD; 30S ribosomal protein S4 K02986 RP-S4; small subunit ribosomal protein S4
D I597_1280 rpsE; 30S ribosomal protein S5 K02988 RP-S5; small subunit ribosomal protein S5
D I597_2040 rpsF; 30S ribosomal protein S6 K02990 RP-S6; small subunit ribosomal protein S6
D I597_1260 rpsG; 30S ribosomal protein S7 K02992 RP-S7; small subunit ribosomal protein S7
D I597_1277 rpsH; 30S ribosomal protein S8 K02994 RP-S8; small subunit ribosomal protein S8
D I597_0161 rpsI; 30S ribosomal protein S9 K02996 RP-S9; small subunit ribosomal protein S9
D I597_1262 rpsJ; 30S ribosomal protein S10 K02946 RP-S10; small subunit ribosomal protein S10
D I597_1286 rpsK; 30S ribosomal protein S11 K02948 RP-S11; small subunit ribosomal protein S11
D I597_1259 rpsL; 30S ribosomal protein S12 K02950 RP-S12; small subunit ribosomal protein S12
D I597_1285 rpsM; 30S ribosomal protein S13 K02952 RP-S13; small subunit ribosomal protein S13
D I597_1276 rpsN2; Alternate 30S ribosomal protein S14 K02954 RP-S14; small subunit ribosomal protein S14
D I597_2835 rpsO; 30S ribosomal protein S15 K02956 RP-S15; small subunit ribosomal protein S15
D I597_0319 rpsP; 30S ribosomal protein S16 K02959 RP-S16; small subunit ribosomal protein S16
D I597_1272 rpsQ; 30S ribosomal protein S17 K02961 RP-S17; small subunit ribosomal protein S17
D I597_2041 rpsR; 30S ribosomal protein S18 K02963 RP-S18; small subunit ribosomal protein S18
D I597_1267 rpsS; 30S ribosomal protein S19 K02965 RP-S19; small subunit ribosomal protein S19
D I597_1630 rpsT; 30S ribosomal protein S20 K02968 RP-S20; small subunit ribosomal protein S20
D I597_2699 30S ribosomal protein S21 K02970 RP-S21; small subunit ribosomal protein S21
D I597_1428 hypothetical protein K19033 PSRP4; 30S ribosomal protein S31
D I597_2687 rplA; 50S ribosomal protein L1 K02863 RP-L1; large subunit ribosomal protein L1
D I597_1266 rplB; 50S ribosomal protein L2 K02886 RP-L2; large subunit ribosomal protein L2
D I597_1263 rplC; 50S ribosomal protein L3 K02906 RP-L3; large subunit ribosomal protein L3
D I597_1264 rplD; 50S ribosomal protein L4 K02926 RP-L4; large subunit ribosomal protein L4
D I597_1275 rplE; 50S ribosomal protein L5 K02931 RP-L5; large subunit ribosomal protein L5
D I597_1278 rplF; 50S ribosomal protein L6 K02933 RP-L6; large subunit ribosomal protein L6
D I597_2042 rplI; 50S ribosomal protein L9 K02939 RP-L9; large subunit ribosomal protein L9
D I597_2686 rplJ; 50S ribosomal protein L10 K02864 RP-L10; large subunit ribosomal protein L10
D I597_2688 rplK; 50S ribosomal protein L11 K02867 RP-L11; large subunit ribosomal protein L11
D I597_2685 rplL; 50S ribosomal protein L7/L12 K02935 RP-L7; large subunit ribosomal protein L7/L12
D I597_0160 rplM; 50S ribosomal protein L13 K02871 RP-L13; large subunit ribosomal protein L13
D I597_1273 rplN; 50S ribosomal protein L14 K02874 RP-L14; large subunit ribosomal protein L14
D I597_1282 rplO; 50S ribosomal protein L15 K02876 RP-L15; large subunit ribosomal protein L15
D I597_1270 rplP; 50S ribosomal protein L16 K02878 RP-L16; large subunit ribosomal protein L16
D I597_1289 rplQ; 50S ribosomal protein L17 K02879 RP-L17; large subunit ribosomal protein L17
D I597_1279 rplR; 50S ribosomal protein L18 K02881 RP-L18; large subunit ribosomal protein L18
D I597_1629 rplS; 50S ribosomal protein L19 K02884 RP-L19; large subunit ribosomal protein L19
D I597_0064 rplT; 50S ribosomal protein L20 K02887 RP-L20; large subunit ribosomal protein L20
D I597_2910 rplU; 50S ribosomal protein L21 K02888 RP-L21; large subunit ribosomal protein L21
D I597_1268 rplV; 50S ribosomal protein L22 K02890 RP-L22; large subunit ribosomal protein L22
D I597_1265 rplW; 50S ribosomal protein L23 K02892 RP-L23; large subunit ribosomal protein L23
D I597_1274 rplX; 50S ribosomal protein L24 K02895 RP-L24; large subunit ribosomal protein L24
D I597_2909 rpmA; 50S ribosomal protein L27 K02899 RP-L27; large subunit ribosomal protein L27
D I597_2721 rpmB; 50S ribosomal protein L28 K02902 RP-L28; large subunit ribosomal protein L28
D I597_1271 rpmC; 50S ribosomal protein L29 K02904 RP-L29; large subunit ribosomal protein L29
D I597_1281 rpmD; 50S ribosomal protein L30 K02907 RP-L30; large subunit ribosomal protein L30
D I597_2415 rpmE2; 50S ribosomal protein L31 type B K02909 RP-L31; large subunit ribosomal protein L31
D I597_0139 rpmF; 50S ribosomal protein L32 K02911 RP-L32; large subunit ribosomal protein L32
D I597_2720 rpmG2; 50S ribosomal protein L33 2 K02913 RP-L33; large subunit ribosomal protein L33
D I597_2376 rpmH; 50S ribosomal protein L34 K02914 RP-L34; large subunit ribosomal protein L34
D I597_0063 rpmI; 50S ribosomal protein L35 K02916 RP-L35; large subunit ribosomal protein L35
D I597_0469 rplY; 50S ribosomal protein L25 K02897 RP-L25; large subunit ribosomal protein L25
D I597_0056 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I597_1148 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I597_1609 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I597_1605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I597_0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I597_1144 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I597_0057 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I597_1147 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I597_1608 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
C 03009 Ribosome biogenesis [BR:ddo03009]
D I597_0574 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D I597_2913 era_4; GTPase Era K03595 era; GTPase
D I597_1221 obg; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
D I597_0559 yocK; General stress protein 16O K06204 dksA; RNA polymerase-binding transcription factor
D I597_1040 hypothetical protein K02600 nusA; transcription termination/antitermination protein NusA
D I597_2009 hypothetical protein K03625 nusB; transcription antitermination protein NusB
D I597_2689 hypothetical protein K02601 nusG; transcription termination/antitermination protein NusG
D I597_0462 rsmA; Ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D I597_2105 rsmB; Ribosomal RNA small subunit methyltransferase B K03500 rsmB; 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]
D I597_2205 rsmD; Ribosomal RNA small subunit methyltransferase D K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D I597_2256 rsmE; Ribosomal RNA small subunit methyltransferase E K09761 rsmE; 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
D I597_1303 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D I597_1318 rsmH; Ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D I597_1576 rsmI_2; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D I597_0762 rsmI_1; Ribosomal RNA small subunit methyltransferase I K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
D I597_1253 Putative TrmH family tRNA/rRNA methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D I597_2912 trmH_5; tRNA (guanosine(18)-2'-O)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D I597_2210 trmH_3; tRNA (guanosine(18)-2'-O)-methyltransferase K03218 rlmB; 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185]
D I597_2121 rlmF; Ribosomal RNA large subunit methyltransferase F K06970 rlmF; 23S rRNA (adenine1618-N6)-methyltransferase [EC:2.1.1.181]
D I597_2033 rlmH; Ribosomal RNA large subunit methyltransferase H K00783 rlmH; 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]
D I597_2425 rlmI; Ribosomal RNA large subunit methyltransferase I K06969 rlmI; 23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]
D I597_1612 rlmL; Ribosomal RNA large subunit methyltransferase L K25137 rlmL; 23S rRNA (guanine2445-N2)-methyltransferase [EC:2.1.1.173]
D I597_2815 rlmN; Dual-specificity RNA methyltransferase RlmN K06941 rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
D I597_1615 rlmCD; 23S rRNA (uracil-C(5))-methyltransferase RlmCD K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D I597_1020 rluF_1; Ribosomal large subunit pseudouridine synthase F K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D I597_1172 rluA; Ribosomal large subunit pseudouridine synthase A K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D I597_1431 rluD; Ribosomal large subunit pseudouridine synthase D K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
D I597_2119 rluE; Ribosomal large subunit pseudouridine synthase E K06181 rluE; 23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
D I597_2215 rluF_2; Ribosomal large subunit pseudouridine synthase F K06182 rluF; 23S rRNA pseudouridine2604 synthase [EC:5.4.99.21]
D I597_0566 rimK; Ribosomal protein S6 modification protein K05844 rimK; ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
D I597_0318 rimM; Ribosome maturation factor RimM K02860 rimM; 16S rRNA processing protein RimM
D I597_1397 rimO; Ribosomal protein S12 methylthiotransferase RimO K14441 rimO; ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
D I597_1542 prmA; Ribosomal protein L11 methyltransferase K02687 prmA; ribosomal protein L11 methyltransferase [EC:2.1.1.-]
D I597_0845 rng; Ribonuclease G K08301 rng; ribonuclease G [EC:3.1.26.-]
D I597_2597 yrrK; Putative Holliday junction resolvase K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
D I597_2044 dbpA; ATP-dependent RNA helicase DbpA K05591 dbpA; ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
D I597_2030 deaD; ATP-dependent RNA helicase DeaD K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I597_2143 rhlE_3; ATP-dependent RNA helicase RhlE K05592 deaD; ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
D I597_2827 rsgA; Putative ribosome biogenesis GTPase RsgA K06949 rsgA; ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.- 3.1.3.100]
D I597_0288 der; GTPase Der K03977 engA; GTPase
D I597_0336 hflX; GTPase HflX K03665 hflX; GTPase
D I597_1673 ywlC_1; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D I597_2494 relA; GTP pyrophosphokinase K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
D I597_0146 rbfA; Ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
D I597_1039 hypothetical protein K09748 rimP; ribosome maturation factor RimP
D I597_2881 rsfS; Ribosomal silencing factor RsfS K09710 ybeB; ribosome-associated protein
D I597_0627 ybeY; Endoribonuclease YbeY K07042 ybeY; probable rRNA maturation factor
D I597_2697 ribosome hibernation promoting factor HPF K05808 hpf; ribosome hibernation promoting factor
D I597_1902 Sigma 54 modulation protein / S30EA ribosomal protein K05809 raiA; ribosome-associated inhibitor A
D I597_1811 ychF; Ribosome-binding ATPase YchF K06942 ychF; ribosome-binding ATPase
D I597_0140 hypothetical protein K07040 yceD; DUF177 domain-containing protein
C 03016 Transfer RNA biogenesis [BR:ddo03016]
D I597_2266 rnz; Ribonuclease Z K00784 rnz; ribonuclease Z [EC:3.1.26.11]
D I597_0624 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I597_1633 proS; Proline--tRNA ligase K01881 PARS; prolyl-tRNA synthetase [EC:6.1.1.15]
D I597_0558 ileS; Isoleucine--tRNA ligase K01870 IARS; isoleucyl-tRNA synthetase [EC:6.1.1.5]
D I597_0825 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I597_0482 metG; Methionine--tRNA ligase K01874 MARS; methionyl-tRNA synthetase [EC:6.1.1.10]
D I597_0618 glnS; Glutamine--tRNA ligase K01886 QARS; glutaminyl-tRNA synthetase [EC:6.1.1.18]
D I597_2797 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I597_1137 lysS; Lysine--tRNA ligase K04567 KARS; lysyl-tRNA synthetase, class II [EC:6.1.1.6]
D I597_0944 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I597_1097 alaS; Alanine--tRNA ligase K01872 AARS; alanyl-tRNA synthetase [EC:6.1.1.7]
D I597_0170 asnS; Asparagine--tRNA ligase K01893 NARS; asparaginyl-tRNA synthetase [EC:6.1.1.22]
D I597_0417 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D I597_0061 thrS; Threonine--tRNA ligase K01868 TARS; threonyl-tRNA synthetase [EC:6.1.1.3]
D I597_0465 serS; Serine--tRNA ligase K01875 SARS; seryl-tRNA synthetase [EC:6.1.1.11]
D I597_2716 cysS; Cysteine--tRNA ligase K01883 CARS; cysteinyl-tRNA synthetase [EC:6.1.1.16]
D I597_2875 valS; Valine--tRNA ligase K01873 VARS; valyl-tRNA synthetase [EC:6.1.1.9]
D I597_1922 hisS; Histidine--tRNA ligase K01892 HARS; histidyl-tRNA synthetase [EC:6.1.1.21]
D I597_0774 pheS; Phenylalanine--tRNA ligase alpha subunit K01889 FARSA; phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
D I597_2336 pheT; Phenylalanine--tRNA ligase beta subunit K01890 FARSB; phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]
D I597_0952 tyrS1; Tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I597_0551 trpS; Tryptophan--tRNA ligase K01867 WARS; tryptophanyl-tRNA synthetase [EC:6.1.1.2]
D I597_2826 dtd; D-tyrosyl-tRNA(Tyr) deacylase K07560 dtd; D-aminoacyl-tRNA deacylase [EC:3.1.1.96]
D I597_0796 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I597_0959 trmB; tRNA (guanine-N(7)-)-methyltransferase K03439 trmB; tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
D I597_1894 truA_1; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D I597_2513 truA_2; tRNA pseudouridine synthase A K06173 truA; tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
D I597_0715 truB; tRNA pseudouridine synthase B K03177 truB; tRNA pseudouridine55 synthase [EC:5.4.99.25]
D I597_1622 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I597_1673 ywlC_1; Threonylcarbamoyl-AMP synthase K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
D I597_2738 miaA; tRNA dimethylallyltransferase K00791 miaA; tRNA dimethylallyltransferase [EC:2.5.1.75]
D I597_2165 mnmE; tRNA modification GTPase MnmE K03650 mnmE; tRNA modification GTPase [EC:3.6.-.-]
D I597_0628 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D I597_2191 cysQ; 3'(2'),5'-bisphosphate nucleotidase CysQ K01082 cysQ; 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]
D I597_0605 ribonuclease P K03536 rnpA; ribonuclease P protein component [EC:3.1.26.5]
D I597_2589 yjjK; putative ABC transporter ATP-binding protein YjjK K06020 ettA; energy-dependent translational throttle protein EttA
D I597_1015 tadA; tRNA-specific adenosine deaminase K11991 tadA; tRNA(adenine34) deaminase [EC:3.5.4.33]
D I597_0148 dus_1; putative tRNA-dihydrouridine synthase K05540 dusB; tRNA-dihydrouridine synthase B [EC:1.-.-.-]
D I597_0025 miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB K06168 miaB; tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:2.8.4.3]
D I597_1587 mtaB; Threonylcarbamoyladenosine tRNA methylthiotransferase MtaB K18707 mtaB; threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:2.8.4.5]
D I597_2556 trmD; tRNA (guanine-N(1)-)-methyltransferase K00554 trmD; tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]
D I597_2028 trmH_2; tRNA (guanosine(18)-2'-O)-methyltransferase K00556 trmH; tRNA (guanosine-2'-O-)-methyltransferase [EC:2.1.1.34]
D I597_1403 trmL; tRNA (cytidine(34)-2'-O)-methyltransferase K03216 trmL; tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
D I597_0317 yfiC; tRNA1(Val) (adenine(37)-N6)-methyltransferase K15460 yfiC; tRNA1Val (adenine37-N6)-methyltransferase [EC:2.1.1.223]
D I597_2807 trmH_4; tRNA (guanosine(18)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D I597_1776 aviRb; 23S rRNA (uridine(2479)-2'-O)-methyltransferase K03437 spoU; RNA methyltransferase, TrmH family
D I597_2393 mnmA; tRNA-specific 2-thiouridylase MnmA K00566 mnmA; tRNA-uridine 2-sulfurtransferase [EC:2.8.1.13]
D I597_0983 erpA; Iron-sulfur cluster insertion protein ErpA K13628 iscA; iron-sulfur cluster assembly protein
D I597_2286 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 miaE; tRNA 2-(methylsulfanyl)-N6-isopentenyladenosine37 hydroxylase [EC:1.14.99.69]
D I597_2820 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase K07568 queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase [EC:2.4.99.17]
D I597_0552 6-pyruvoyl tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D I597_1757 queD; 6-carboxy-5,6,7,8-tetrahydropterin synthase K01737 queD; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase [EC:4.2.3.12 4.1.2.50]
D I597_1384 queE; 7-carboxy-7-deazaguanine synthase K10026 queE; 7-carboxy-7-deazaguanine synthase [EC:4.3.99.3]
D I597_1053 queG; Epoxyqueuosine reductase K18979 queG; epoxyqueuosine reductase [EC:1.17.99.6]
D I597_2864 tgt; Queuine tRNA-ribosyltransferase K00773 tgt; queuine tRNA-ribosyltransferase [EC:2.4.2.29]
D I597_2665 tilS; tRNA(Ile)-lysidine synthase K04075 tilS; tRNA(Ile)-lysidine synthase [EC:6.3.4.19]
D I597_1086 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB K14742 tsaB; tRNA threonylcarbamoyladenosine biosynthesis protein TsaB
D I597_2255 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase K25706 tsaD; tRNA N6-adenosine threonylcarbamoyltransferase [EC:2.3.1.234]
D I597_1974 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE K06925 tsaE; tRNA threonylcarbamoyladenosine biosynthesis protein TsaE
D I597_0612 rnr; Ribonuclease R K12573 rnr; ribonuclease R [EC:3.1.13.1]
D I597_2836 pnp; Polyribonucleotide nucleotidyltransferase K00962 pnp; polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
C 03012 Translation factors [BR:ddo03012]
D I597_1936 translation initiation factor Sui1 K03113 EIF1; translation initiation factor 1
D I597_1041 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D I597_0062 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D I597_0014 yheS_1; putative ABC transporter ATP-binding protein YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D I597_2923 yheS_4; putative ABC transporter ATP-binding protein YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D I597_1650 yheS_2; putative ABC transporter ATP-binding protein YheS K06158 ABCF3; ATP-binding cassette, subfamily F, member 3
D I597_0163 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D I597_2692 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D I597_1261 fusA; Elongation factor G K02355 fusA; elongation factor G
D I597_2477 prfA; Peptide chain release factor 1 K02835 prfA; peptide chain release factor 1
D I597_0166 frr; Ribosome-recycling factor K02838 frr; ribosome recycling factor
D I597_2758 prmC; Release factor glutamine methyltransferase K02493 hemK; release factor glutamine methyltransferase [EC:2.1.1.297]
D I597_0468 pth; Peptidyl-tRNA hydrolase K01056 PTH1; peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]
D I597_1284 infA; Translation initiation factor IF-1 K02518 infA; translation initiation factor IF-1
D I597_1983 efp; Elongation factor P K02356 efp; elongation factor P
D I597_2557 prfB; Peptide chain release factor 2 K02836 prfB; peptide chain release factor 2
D I597_1751 prfC; Peptide chain release factor 3 K02837 prfC; peptide chain release factor 3
D I597_0745 arfB; Peptidyl-tRNA hydrolase ArfB K15034 yaeJ; ribosome-associated protein
C 03110 Chaperones and folding catalysts [BR:ddo03110]
D I597_2053 clpB1; Chaperone protein ClpB 1 K03695 clpB; ATP-dependent Clp protease ATP-binding subunit ClpB
D I597_2087 clpC; Negative regulator of genetic competence ClpC/MecB K03696 clpC; ATP-dependent Clp protease ATP-binding subunit ClpC
D I597_0294 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX K03544 clpX; ATP-dependent Clp protease ATP-binding subunit ClpX
D I597_2520 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D I597_2506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I597_0032 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I597_1482 dnaJ_2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D I597_0504 dnaJ_1; Chaperone protein DnaJ K05801 djlA; DnaJ like chaperone protein
D I597_1481 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D I597_2380 18 kDa heat shock protein K13993 HSP20; HSP20 family protein
D I597_1417 hslR; Heat shock protein 15 K04762 hslR; ribosome-associated heat shock protein Hsp15
D I597_0030 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D I597_2525 degP; Periplasmic serine endoprotease DegP precursor K04771 degP; serine protease Do [EC:3.4.21.107]
D I597_2880 ftsH3; ATP-dependent zinc metalloprotease FtsH 3 K08956 AFG3; AFG3 family protein [EC:3.4.24.-]
D I597_0673 atpB; ATP synthase subunit a K02108 ATPF0A; F-type H+-transporting ATPase subunit a
D I597_1128 hypothetical protein K06006 cpxP; periplasmic protein CpxP/Spy
D I597_0598 Thermophilic serine proteinase precursor K13274 wprA; cell wall-associated protease [EC:3.4.21.-]
D I597_1371 apr; Subtilisin DY K14645 K14645; serine protease [EC:3.4.21.-]
D I597_2424 Beta-N-acetylhexosaminidase K12373 HEXA_B; hexosaminidase [EC:3.2.1.52]
D I597_2511 ppiB_2; putative peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D I597_0096 surA_1; Chaperone SurA precursor K03770 ppiD; peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
D I597_2296 surA_2; Chaperone SurA precursor K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D I597_2298 prsA1; Foldase protein PrsA 1 precursor K03771 surA; peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8]
D I597_1033 Thioredoxin-like protein K03671 TXN; thioredoxin
D I597_0376 Thioredoxin-like protein K03671 TXN; thioredoxin
D I597_0821 trxA; Thioredoxin-1 K03671 TXN; thioredoxin
D I597_2563 trxC; Putative thioredoxin-2 K03671 TXN; thioredoxin
D I597_2047 dsbE; Thiol:disulfide interchange protein DsbE K02199 ccmG; cytochrome c biogenesis protein CcmG, thiol:disulfide interchange protein DsbE
C 04131 Membrane trafficking [BR:ddo04131]
D I597_1557 ndk; Nucleoside diphosphate kinase K00940 ndk; nucleoside-diphosphate kinase [EC:2.7.4.6]
D I597_2884 gap1; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I597_2252 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I597_2526 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I597_2578 Histidine phosphatase superfamily (branch 1) K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
D I597_0571 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I597_2520 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D I597_2622 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family
C 04121 Ubiquitin system
C 03051 Proteasome [BR:ddo03051]
D I597_2520 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
C 03032 DNA replication proteins [BR:ddo03032]
D I597_0578 rnhA; Ribonuclease H K03469 rnhA; ribonuclease HI [EC:3.1.26.4]
D I597_2848 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I597_1639 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D I597_0844 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D I597_1583 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D I597_2860 dnaC; Replicative DNA helicase K02314 dnaB; replicative DNA helicase [EC:5.6.2.3]
D I597_1309 dnaG; DNA primase K02316 dnaG; DNA primase [EC:2.7.7.101]
D I597_0380 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0840 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0322 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I597_2348 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I597_2449 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I597_0631 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I597_2725 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2736 uvrC_2; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2123 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_0423 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I597_1142 rnhB; Ribonuclease K03470 rnhB; ribonuclease HII [EC:3.1.26.4]
D I597_0157 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I597_2755 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D I597_2088 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D I597_1390 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D I597_1953 gyrA_1; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D I597_1952 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D I597_0022 topA_1; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D I597_2670 Eukaryotic DNA topoisomerase I, catalytic core K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
C 03036 Chromosome and associated proteins [BR:ddo03036]
D I597_2848 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I597_0574 rnc; Ribonuclease 3 K03685 rnc; ribonuclease III [EC:3.1.26.3]
D I597_1639 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D I597_0844 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D I597_1583 dnaA; Chromosomal replication initiator protein DnaA K02313 dnaA; chromosomal replication initiator protein
D I597_2198 dps_2; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D I597_1348 dps_1; DNA protection during starvation protein K04047 dps; starvation-inducible DNA-binding protein
D I597_2406 lrp_2; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D I597_2559 lrp_3; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D I597_1118 lrp_1; Leucine-responsive regulatory protein K03719 lrp; Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
D I597_1328 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D I597_1568 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D I597_1320 spoVD_2; Stage V sporulation protein D K03587 ftsI; cell division protein FtsI (penicillin-binding protein 3) [EC:3.4.16.4]
D I597_2567 spoIIIE; DNA translocase SpoIIIE K03466 ftsK; DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
D I597_1327 ftsQ; Cell division protein FtsQ K03589 ftsQ; cell division protein FtsQ
D I597_1324 ftsW; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D I597_0712 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D I597_1329 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D I597_1153 Cell division protein ZapA K09888 zapA; cell division protein ZapA
D I597_2446 amiA; N-acetylmuramoyl-L-alanine amidase AmiA precursor K01448 amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]
D I597_0046 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D I597_0047 mreC; Cell shape-determining protein MreC precursor K03570 mreC; rod shape-determining protein MreC
D I597_0050 mrdB; Rod shape-determining protein RodA K05837 rodA; rod shape determining protein RodA
D I597_2781 soj; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D I597_2782 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
D I597_1953 gyrA_1; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D I597_1952 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D I597_0628 mnmG; tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG K03495 gidA; tRNA uridine 5-carboxymethylaminomethyl modification enzyme
D I597_1303 rsmG; Ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D I597_2698 xerC; Tyrosine recombinase XerC K03733 xerC; integrase/recombinase XerC
D I597_2633 xerD_3; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D I597_2527 xerD_2; Tyrosine recombinase XerD K04763 xerD; integrase/recombinase XerD
D I597_0962 minD; Septum site-determining protein MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D I597_1315 engB; putative GTP-binding protein EngB K03978 engB; GTP-binding protein
C 03400 DNA repair and recombination proteins [BR:ddo03400]
D I597_0533 ogt_1; Methylated-DNA--protein-cysteine methyltransferase K00567 ogt; methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
D I597_1654 phr; Deoxyribodipyrimidine photo-lyase K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D I597_0809 cry2; Cryptochrome-like protein cry2 K01669 phr; deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
D I597_1931 ung; Uracil-DNA glycosylase K03648 UNG; uracil-DNA glycosylase [EC:3.2.2.27]
D I597_0843 yfhQ; putative A/G-specific adenine glycosylase YfhQ K03575 mutY; A/G-specific adenine glycosylase [EC:3.2.2.31]
D I597_2069 nth; Endonuclease III K10773 NTHL1; endonuclease III [EC:3.2.2.- 4.2.99.18]
D I597_1765 S1/P1 Nuclease K05986 NUCS; nuclease S1 [EC:3.1.30.1]
D I597_0683 dut; Deoxyuridine 5'-triphosphate nucleotidohydrolase K01520 dut; dUTP diphosphatase [EC:3.6.1.23]
D I597_0808 Deoxyribodipyrimidine photo-lyase-related protein K06876 phrB; (6-4)DNA photolyase [EC:4.1.99.13]
D I597_0718 tag; DNA-3-methyladenine glycosylase 1 K01246 tag; DNA-3-methyladenine glycosylase I [EC:3.2.2.20]
D I597_0413 exoA; Exodeoxyribonuclease K01142 E3.1.11.2; exodeoxyribonuclease III [EC:3.1.11.2]
D I597_0554 recJ; Single-stranded-DNA-specific exonuclease RecJ K07462 recJ; single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
D I597_2755 ligA; DNA ligase K01972 E6.5.1.2; DNA ligase (NAD+) [EC:6.5.1.2]
D I597_0157 polA; DNA polymerase I K02335 polA; DNA polymerase I [EC:2.7.7.7]
D I597_2066 uvrA_1; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D I597_2096 uvrA_2; UvrABC system protein A K03701 uvrA; excinuclease ABC subunit A
D I597_2379 uvrB; UvrABC system protein B K03702 uvrB; excinuclease ABC subunit B
D I597_0568 uvrC_1; UvrABC system protein C K03703 uvrC; excinuclease ABC subunit C
D I597_2457 pcrA; ATP-dependent DNA helicase PcrA K03657 uvrD; ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
D I597_2684 rpoB; DNA-directed RNA polymerase subunit beta K03043 rpoB; DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
D I597_2683 rpoC; DNA-directed RNA polymerase subunit beta' K03046 rpoC; DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
D I597_1288 rpoA; DNA-directed RNA polymerase subunit alpha K03040 rpoA; DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
D I597_0497 mfd; Transcription-repair-coupling factor K03723 mfd; transcription-repair coupling factor (superfamily II helicase) [EC:5.6.2.4]
D I597_0273 mutS_1; DNA mismatch repair protein MutS K03555 mutS; DNA mismatch repair protein MutS
D I597_1930 mutS2_2; Endonuclease MutS2 K07456 mutS2; DNA mismatch repair protein MutS2
D I597_2790 mutL; DNA mismatch repair protein MutL K03572 mutL; DNA mismatch repair protein MutL
D I597_0322 dnaE_2; DNA polymerase III subunit alpha K02337 dnaE; DNA polymerase III subunit alpha [EC:2.7.7.7]
D I597_2348 dnaN; DNA polymerase III subunit beta K02338 dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]
D I597_2449 DNA polymerase III subunit delta K02340 holA; DNA polymerase III subunit delta [EC:2.7.7.7]
D I597_0631 holB; DNA polymerase III subunit delta' K02341 holB; DNA polymerase III subunit delta' [EC:2.7.7.7]
D I597_2725 DNA polymerase III subunit epsilon K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2736 uvrC_2; UvrABC system protein C K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2123 hypothetical protein K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_0423 polC; DNA polymerase III PolC-type K02342 dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]
D I597_2285 dnaX; DNA polymerase III subunit tau K02343 dnaX; DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
D I597_0380 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0840 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0547 recombinase A K03553 recA; recombination protein RecA
D I597_1059 ruvA; Holliday junction ATP-dependent DNA helicase RuvA K03550 ruvA; holliday junction DNA helicase RuvA
D I597_1051 ruvB; Holliday junction ATP-dependent DNA helicase RuvB K03551 ruvB; holliday junction DNA helicase RuvB [EC:5.6.2.4]
D I597_0875 ruvC; Crossover junction endodeoxyribonuclease RuvC K01159 ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]
D I597_2038 priA; Primosomal protein N' K04066 priA; primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
D I597_0410 hypothetical protein K04485 radA; DNA repair protein RadA/Sms
D I597_2794 recF_2; DNA replication and repair protein RecF K03629 recF; DNA replication and repair protein RecF
D I597_2334 recG; ATP-dependent DNA helicase RecG K03655 recG; ATP-dependent DNA helicase RecG [EC:5.6.2.4]
D I597_0760 recO; DNA repair protein RecO K03584 recO; DNA repair protein RecO (recombination protein O)
D I597_2730 recR; Recombination protein RecR K06187 recR; recombination protein RecR
D I597_2745 recN; DNA repair protein RecN K03631 recN; DNA repair protein RecN (Recombination protein N)
D I597_2004 AAA-like domain protein K06915 herA; DNA double-strand break repair helicase HerA and related ATPase
D I597_2088 gyrA_2; DNA gyrase subunit A K02469 gyrA; DNA gyrase subunit A [EC:5.6.2.2]
D I597_1390 gyrB; DNA gyrase subunit B K02470 gyrB; DNA gyrase subunit B [EC:5.6.2.2]
D I597_0022 topA_1; DNA topoisomerase 1 K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D I597_2670 Eukaryotic DNA topoisomerase I, catalytic core K03168 topA; DNA topoisomerase I [EC:5.6.2.1]
D I597_1639 hupB; DNA-binding protein HU-beta K03530 hupB; DNA-binding protein HU-beta
D I597_0844 DNA-binding protein HU K03530 hupB; DNA-binding protein HU-beta
D I597_2704 recQ_3; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I597_0381 recQ_1; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I597_1641 recQ_2; ATP-dependent DNA helicase RecQ K03654 recQ; ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
D I597_0885 dinB_3; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D I597_0054 dinB_1; DNA polymerase IV K02346 dinB; DNA polymerase IV [EC:2.7.7.7]
D I597_0603 dinB_2; DNA polymerase IV K03502 umuC; DNA polymerase V
D I597_0604 DNA polymerase V subunit UmuD K03503 umuD; DNA polymerase V [EC:3.4.21.-]
D I597_0055 dnaE_1; DNA polymerase III subunit alpha K14162 dnaE2; error-prone DNA polymerase [EC:2.7.7.7]
D I597_0846 recombination regulator RecX K03565 recX; regulatory protein
D I597_0478 cshB; DEAD-box ATP-dependent RNA helicase CshB K03724 lhr; ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
D I597_1006 nrdA; Ribonucleoside-diphosphate reductase 1 subunit alpha K00525 E1.17.4.1A; ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
D I597_1005 nrdB; Ribonucleoside-diphosphate reductase subunit beta K00526 E1.17.4.1B; ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1]
D I597_1556 nrnA; Bifunctional oligoribonuclease and PAP phosphatase NrnA K06881 nrnA; bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:3.1.3.7 3.1.13.3]
C 03029 Mitochondrial biogenesis [BR:ddo03029]
D I597_1041 infB; Translation initiation factor IF-2 K02519 infB; translation initiation factor IF-2
D I597_0062 infC; Translation initiation factor IF-3 K02520 infC; translation initiation factor IF-3
D I597_0163 tsf; Elongation factor Ts K02357 tsf; elongation factor Ts
D I597_2692 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D I597_1261 fusA; Elongation factor G K02355 fusA; elongation factor G
D I597_2913 era_4; GTPase Era K03595 era; GTPase
D I597_0952 tyrS1; Tyrosine--tRNA ligase 1 K01866 YARS; tyrosyl-tRNA synthetase [EC:6.1.1.1]
D I597_0825 leuS; Leucine--tRNA ligase K01869 LARS; leucyl-tRNA synthetase [EC:6.1.1.4]
D I597_0944 aspS; Aspartate--tRNA ligase K01876 DARS2; aspartyl-tRNA synthetase [EC:6.1.1.12]
D I597_0417 glyQS; Glycine--tRNA ligase K01880 GARS; glycyl-tRNA synthetase [EC:6.1.1.14]
D I597_2797 argS; Arginine--tRNA ligase K01887 RARS; arginyl-tRNA synthetase [EC:6.1.1.19]
D I597_0083 nucA; Nuclease precursor K01173 ENDOG; endonuclease G, mitochondrial
D I597_0380 ssb_1; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0840 ssb_2; Single-stranded DNA-binding protein K03111 ssb; single-strand DNA-binding protein
D I597_0306 bamA_2; Outer membrane protein assembly factor BamA precursor K07277 SAM50; outer membrane protein insertion porin family
D I597_2129 bamA_4; Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D I597_2506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I597_1481 heat shock protein GrpE K03687 GRPE; molecular chaperone GrpE
D I597_0032 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I597_0030 groS; 10 kDa chaperonin K04078 groES; chaperonin GroES
D I597_1482 dnaJ_2; Chaperone protein DnaJ K03686 dnaJ; molecular chaperone DnaJ
D I597_1622 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
D I597_0965 thcC; Rhodocoxin K22071 FDX2; ferredoxin-2, mitochondrial
D I597_0315 Fe/S biogenesis protein NfuA K22074 NFU1; NFU1 iron-sulfur cluster scaffold homolog, mitochondrial
D I597_0962 minD; Septum site-determining protein MinD K03593 mrp; ATP-binding protein involved in chromosome partitioning
D I597_1069 ctaB1; Protoheme IX farnesyltransferase 1 K02257 COX10; heme o synthase [EC:2.5.1.141]
D I597_1663 ctaA; Heme A synthase K02259 COX15; heme a synthase [EC:1.17.99.9]
D I597_1686 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I597_1074 hypothetical protein K07152 SCO1; protein SCO1
D I597_0862 hypothetical protein K07152 SCO1; protein SCO1
D I597_0912 hypothetical protein K07152 SCO1; protein SCO1
D I597_1990 SPFH domain / Band 7 family protein K17080 PHB1; prohibitin 1
D I597_2520 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
B
B 09183 Protein families: signaling and cellular processes
C 02000 Transporters [BR:ddo02000]
D I597_2420 msbA; Lipid A export ATP-binding/permease protein MsbA K11085 msbA; ATP-binding cassette, subfamily B, bacterial MsbA [EC:7.5.2.6]
D I597_2008 yheI; putative multidrug resistance ABC transporter ATP-binding/permease protein YheI K18889 mdlA; ATP-binding cassette, subfamily B, multidrug efflux pump
D I597_2514 putative ABC transporter ATP-binding protein K18890 mdlB; ATP-binding cassette, subfamily B, multidrug efflux pump
D I597_0583 lagD; Lactococcin-G-processing and transport ATP-binding protein LagD K20344 blpA; ATP-binding cassette, subfamily C, bacteriocin exporter
D I597_1508 putative ABC transporter ATP-binding protein K15738 uup; ABC transport system ATP-binding/permease protein
D I597_2445 mce related protein K02067 mlaD; phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
D I597_1202 mlaE; putative phospholipid ABC transporter permease protein MlaE K02066 mlaE; phospholipid/cholesterol/gamma-HCH transport system permease protein
D I597_1201 metN; Methionine import ATP-binding protein MetN K02065 mlaF; phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein
D I597_1586 hbpA; Heme-binding protein A precursor K02035 ABC.PE.S; peptide/nickel transport system substrate-binding protein
D I597_1546 dppB; Dipeptide transport system permease protein DppB K02033 ABC.PE.P; peptide/nickel transport system permease protein
D I597_0084 gsiD; Glutathione transport system permease protein GsiD K02034 ABC.PE.P1; peptide/nickel transport system permease protein
D I597_0539 gsiA; Glutathione import ATP-binding protein GsiA K02031 ddpD; peptide/nickel transport system ATP-binding protein
D I597_2368 Periplasmic binding protein K25034 btuF; cobalamin transport system substrate-binding protein
D I597_2369 hmuU; Hemin transport system permease protein HmuU K25027 btuC; cobalamin transport system permease protein
D I597_2370 yusV; putative siderophore transport system ATP-binding protein YusV K25028 btuD; cobalamin transport system ATP-binding protein [EC:7.6.2.8]
D I597_0854 troA; Periplasmic zinc-binding protein TroA precursor K11707 troA; manganese/zinc/iron transport system substrate-binding protein
D I597_0857 mntB_1; Manganese transport system membrane protein MntB K11708 troC; manganese/zinc/iron transport system permease protein
D I597_0858 mntB_2; Manganese transport system membrane protein MntB K11709 troD; manganese/zinc/iron transport system permease protein
D I597_0855 znuC; High-affinity zinc uptake system ATP-binding protein ZnuC K11710 troB; manganese/zinc/iron transport system ATP- binding protein [EC:7.2.2.5]
D I597_1511 tagG; Teichoic acid translocation permease protein TagG K09690 wzm; homopolymeric O-antigen transport system permease protein
D I597_1512 tagH; Teichoic acids export ATP-binding protein TagH K09691 wzt; homopolymeric O-antigen transport system ATP-binding protein [EC:7.5.2.14]
D I597_2569 putative permease YjgP/YjgQ family protein K07091 lptF; lipopolysaccharide export system permease protein
D I597_2863 lptG; Lipopolysaccharide export system permease protein LptG K11720 lptG; lipopolysaccharide export system permease protein
D I597_0663 lptB_1; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D I597_2708 lptB_3; Lipopolysaccharide export system ATP-binding protein LptB K06861 lptB; lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
D I597_2347 ABC-type uncharacterized transport system K25151 gldF; gliding motility-associated transport system permease protein
D I597_2833 yxlF_3; putative ABC transporter ATP-binding protein YxlF K25152 gldA; gliding motility-associated transport system ATP-binding protein
D I597_0147 lolE; Lipoprotein-releasing system transmembrane protein LolE K09808 lolC_E; lipoprotein-releasing system permease protein
D I597_2362 ytrF; ABC transporter permease YtrF precursor K09808 lolC_E; lipoprotein-releasing system permease protein
D I597_2080 lolD; Lipoprotein-releasing system ATP-binding protein LolD K09810 lolD; lipoprotein-releasing system ATP-binding protein [EC:7.6.2.-]
D I597_0712 ftsX; Cell division protein FtsX K09811 ftsX; cell division transport system permease protein
D I597_1568 ftsE; Cell division ATP-binding protein FtsE K09812 ftsE; cell division transport system ATP-binding protein
D I597_1484 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I597_0071 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I597_1668 ABC-2 family transporter protein K01992 ABC-2.P; ABC-2 type transport system permease protein
D I597_1483 lptB_2; Lipopolysaccharide export system ATP-binding protein LptB K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I597_0668 opuBA; Choline transport ATP-binding protein OpuBA K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I597_1667 yxlF_2; putative ABC transporter ATP-binding protein YxlF K01990 ABC-2.A; ABC-2 type transport system ATP-binding protein
D I597_1921 macB_6; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D I597_1081 macB_3; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D I597_1082 macB_4; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D I597_0044 macB_1; Macrolide export ATP-binding/permease protein MacB K02004 ABC.CD.P; putative ABC transport system permease protein
D I597_1080 macB_2; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D I597_1506 macB_5; Macrolide export ATP-binding/permease protein MacB K02003 ABC.CD.A; putative ABC transport system ATP-binding protein
D I597_0979 sufC; putative ATP-dependent transporter SufC K09013 sufC; Fe-S cluster assembly ATP-binding protein
D I597_1870 sglT_3; Sodium/glucose cotransporter K14386 SLC5A6; solute carrier family 5 (sodium-dependent multivitamin transporter), member 6
D I597_0382 sdcS; Sodium-dependent dicarboxylate transporter SdcS K14445 SLC13A2_3_5; solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
D I597_1491 norM; Multidrug resistance protein NorM K26939 norM; MATE family, multidrug efflux pump
D I597_0595 dinF; DNA-damage-inducible protein F K26937 dinF; MATE family, multidrug efflux pump
D I597_0515 mepA; Multidrug export protein MepA K26937 dinF; MATE family, multidrug efflux pump
D I597_0920 xylE; D-xylose-proton symporter K02100 araE; MFS transporter, SP family, arabinose:H+ symporter
D I597_1055 putative transporter K08174 glcP; MFS transporter, FHS family, glucose/mannose:H+ symporter
D I597_0896 exuT; Hexuronate transporter K08191 exuT; MFS transporter, ACS family, aldohexuronate transporter
D I597_2153 bcr; Bicyclomycin resistance protein K07552 bcr; MFS transporter, DHA1 family, multidrug resistance protein
D I597_2244 yqcE; Inner membrane protein YqcE K26602 yihN; MFS transporter, GlpU family, inner membrane protein
D I597_2622 Vacuole effluxer Atg22 like protein K06902 UMF1; MFS transporter, UMF1 family
D I597_2756 aqpZ; Aquaporin Z K06188 aqpZ; aquaporin Z
D I597_1658 aqpZ2; Aquaporin Z 2 K09874 NIP; aquaporin NIP
D I597_2737 Cyclic nucleotide-gated potassium channel K10716 kch; voltage-gated potassium channel
D I597_2703 kch; Voltage-gated potassium channel Kch K10716 kch; voltage-gated potassium channel
D I597_1578 amtB; Ammonia channel precursor K03320 amt; ammonium transporter, Amt family
D I597_0784 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D I597_0785 von Willebrand factor type A domain protein K07114 yfbK; Ca-activated chloride channel homolog
D I597_2020 hypothetical protein K07114 yfbK; Ca-activated chloride channel homolog
D I597_0783 Tetratricopeptide repeat protein K07114 yfbK; Ca-activated chloride channel homolog
D I597_0767 mscL_1; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D I597_2621 mscL_2; Large-conductance mechanosensitive channel K03282 mscL; large conductance mechanosensitive channel
D I597_1087 mscS_1; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D I597_1088 mscS_2; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D I597_1698 mscS_3; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D I597_1903 mscS_4; Small-conductance mechanosensitive channel K03442 mscS; small conductance mechanosensitive channel
D I597_0888 ybdG; Miniconductance mechanosensitive channel YbdG K16053 ybdG; miniconductance mechanosensitive channel
D I597_0461 Magnesium transporter MgtE K06213 mgtE; magnesium transporter
D I597_0313 motB_1; Motility protein B K02557 motB; chemotaxis protein MotB
D I597_0412 yiaD_1; putative lipoprotein YiaD precursor K02557 motB; chemotaxis protein MotB
D I597_2452 motB_2; Motility protein B K02557 motB; chemotaxis protein MotB
D I597_2899 biopolymer transport protein ExbB K03561 exbB; biopolymer transport protein ExbB
D I597_0078 colicin uptake protein TolQ K03561 exbB; biopolymer transport protein ExbB
D I597_0077 biopolymer transport protein ExbD K03559 exbD; biopolymer transport protein ExbD
D I597_1795 corA; Magnesium transport protein CorA K03284 corA; magnesium transporter
D I597_2398 crcB; Putative fluoride ion transporter CrcB K06199 crcB; fluoride exporter
D I597_1821 copA; Copper-exporting P-type ATPase A K08363 merT; mercuric ion transport protein
D I597_0223 hypothetical protein K24915 TMEM175; TMEM175 potassium channel family protein
D I597_0097 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I597_0839 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I597_0531 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I597_1899 oprF_7; Outer membrane porin F precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D I597_0590 oprF_4; Outer membrane porin F precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D I597_0729 Outer membrane lipoprotein Omp16 precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D I597_1693 oprF_5; Outer membrane porin F precursor K03286 TC.OOP; OmpA-OmpF porin, OOP family
D I597_0299 Putative outer membrane protein precursor K06076 fadL; long-chain fatty acid transport protein
D I597_1681 fecA_2; Fe(3+) dicitrate transport protein FecA precursor K16091 fecA; Fe(3+) dicitrate transport protein
D I597_2367 btuB_7; Vitamin B12 transporter BtuB precursor K16092 btuB; vitamin B12 transporter
D I597_0274 btuB_1; Vitamin B12 transporter BtuB K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D I597_1185 TonB dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D I597_2059 btuB_6; Vitamin B12 transporter BtuB K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D I597_0901 vitamin B12/cobalamin outer membrane transporter K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D I597_0933 TonB dependent receptor K21573 susC; TonB-dependent starch-binding outer membrane protein SusC
D I597_0852 cirA_3; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D I597_1843 btuB_5; Vitamin B12 transporter BtuB precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D I597_1818 cirA_4; Colicin I receptor precursor K16089 TC.FEV.OM2; outer membrane receptor for ferrienterochelin and colicins
D I597_0761 cirA_2; Colicin I receptor precursor K16087 TC.FEV.OM3; hemoglobin/transferrin/lactoferrin receptor protein
D I597_2845 fhuA; Ferrichrome-iron receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D I597_0386 cirA_1; Colicin I receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D I597_2323 putative TonB-dependent receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D I597_0800 btuB_2; Vitamin B12 transporter BtuB K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D I597_0985 fecA_1; Fe(3+) dicitrate transport protein FecA precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D I597_1872 hemR; Hemin receptor precursor K02014 TC.FEV.OM; iron complex outermembrane recepter protein
D I597_1084 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_0010 bepC_1; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_0278 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_2919 bepC_2; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_2175 Polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D I597_1509 Polysaccharide biosynthesis/export protein K01991 wza; polysaccharide biosynthesis/export protein
D I597_0306 bamA_2; Outer membrane protein assembly factor BamA precursor K07277 SAM50; outer membrane protein insertion porin family
D I597_2129 bamA_4; Outer membrane protein assembly factor BamA K07277 SAM50; outer membrane protein insertion porin family
D I597_2749 tol-pal system protein YbgF K05807 bamD; outer membrane protein assembly factor BamD
D I597_1231 hypothetical protein K21449 ata; trimeric autotransporter adhesin
D I597_0099 Lipopolysaccharide-assembly, LptC-related K11719 lptC; lipopolysaccharide export system protein LptC
D I597_1054 Major Facilitator Superfamily protein K16211 malY; maltose/moltooligosaccharide transporter
D I597_1465 ZIP Zinc transporter K07238 TC.ZIP; zinc transporter, ZIP family
D I597_0276 mexB; Multidrug resistance protein MexB K18989 vexF; multidrug efflux pump
D I597_2493 yrbG; Inner membrane protein YrbG K07301 yrbG; cation:H+ antiporter
D I597_2561 nhaC; Na(+)/H(+) antiporter NhaC K03315 nhaC; Na+:H+ antiporter, NhaC family
D I597_1466 nhaH; Na(+)/H(+) antiporter NhaH K24160 NHA1; sodium/hydrogen antiporter
D I597_1841 kefC; Glutathione-regulated potassium-efflux system protein KefC K11747 kefB; glutathione-regulated potassium-efflux system protein KefB
D I597_2803 trkH; Trk system potassium uptake protein TrkH K03498 trkH; trk/ktr system potassium uptake protein
D I597_0524 ktrB; Ktr system potassium uptake protein B K03498 trkH; trk/ktr system potassium uptake protein
D I597_2804 trkA; Trk system potassium uptake protein TrkA K03499 trkA; trk/ktr system potassium uptake protein
D I597_0777 bicA; Bicarbonate transporter BicA K03321 TC.SULP; sulfate permease, SulP family
D I597_1734 dauA_2; C4-dicarboxylic acid transporter DauA K03321 TC.SULP; sulfate permease, SulP family
D I597_2660 mntH; Divalent metal cation transporter MntH K03322 mntH; manganese transport protein
D I597_0289 LysE type translocator K11249 eamB; cysteine/O-acetylserine efflux protein
D I597_0283 hypothetical protein K09125 yhhQ; queuosine precursor transporter
D I597_1242 hypothetical protein K05595 marC; multiple antibiotic resistance protein
D I597_0432 hypothetical protein K05595 marC; multiple antibiotic resistance protein
D I597_1874 hypothetical protein K05595 marC; multiple antibiotic resistance protein
D I597_1324 ftsW; Lipid II flippase FtsW K03588 ftsW; cell division protein FtsW
D I597_0824 PQ loop repeat protein K15383 K15383; MtN3 and saliva related transmembrane protein
D I597_1063 Gram-negative bacterial tonB protein K03832 tonB; periplasmic protein TonB
D I597_1064 Gram-negative bacterial tonB protein K03832 tonB; periplasmic protein TonB
D I597_0076 hypothetical protein K03832 tonB; periplasmic protein TonB
D I597_0237 hppA1; Putative K(+)-stimulated pyrophosphate-energized sodium pump K15987 hppA; K(+)-stimulated pyrophosphate-energized sodium pump [EC:7.2.3.1]
D I597_0277 czcB; Cobalt-zinc-cadmium resistance protein CzcB K18990 vexE; membrane fusion protein, multidrug efflux system
D I597_0582 hlyD; Hemolysin secretion protein D, chromosomal K20345 blpB; membrane fusion protein, peptide pheromone/bacteriocin exporter
D I597_2174 ptk; Tyrosine-protein kinase ptk K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D I597_1510 ywqD; Tyrosine-protein kinase YwqD K16692 etk-wzc; tyrosine-protein kinase Etk/Wzc [EC:2.7.10.3]
D I597_0932 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D I597_1184 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D I597_0900 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D I597_2058 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D I597_0275 SusD family protein K21572 susD; starch-binding outer membrane protein, SusD/RagB family
D I597_0804 Nicotinamide mononucleotide transporter K03811 pnuC; nicotinamide mononucleotide transporter
D I597_0861 ferrous iron transport protein A K04758 feoA; ferrous iron transport protein A
D I597_0860 feoB; Ferrous iron transport protein B K04759 feoB; ferrous iron transport protein B
D I597_0936 TspO/MBR family protein K05770 TSPO; translocator protein
C 02044 Secretion system [BR:ddo02044]
D I597_1084 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_0010 bepC_1; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_0278 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_2919 bepC_2; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_0436 tRNA-specific adenosine deaminase K01493 comEB; dCMP deaminase [EC:3.5.4.12]
D I597_0090 ComEC family competence protein K02238 comEC; competence protein ComEC
D I597_2043 hypothetical protein K12109 cag24; cag pathogenicity island protein 24
D I597_2485 curli assembly protein CsgF K04338 csgF; curli production assembly/transport component CsgF
D I597_2484 Curli production assembly/transport component CsgG K06214 csgG; curli production assembly/transport component CsgG
D I597_1502 preprotein translocase subunit SecA K03070 secA; preprotein translocase subunit SecA [EC:7.4.2.8]
D I597_1386 bifunctional preprotein translocase subunit SecD/SecF K12257 secDF; SecD/SecF fusion protein
D I597_2690 preprotein translocase subunit SecE K03073 secE; preprotein translocase subunit SecE
D I597_0029 preprotein translocase subunit SecG K03075 secG; preprotein translocase subunit SecG
D I597_1283 preprotein translocase subunit SecY K03076 secY; preprotein translocase subunit SecY
D I597_2413 ffh; Signal recognition particle protein K03106 SRP54; signal recognition particle subunit SRP54 [EC:3.6.5.4]
D I597_1393 ftsY; Signal recognition particle receptor FtsY K03110 ftsY; fused signal recognition particle receptor
D I597_2011 preprotein translocase subunit YajC K03210 yajC; preprotein translocase subunit YajC
D I597_1686 yidC; Membrane protein insertase YidC K03217 yidC; YidC/Oxa1 family membrane protein insertase
D I597_1369 twin arginine translocase protein A K03116 tatA; sec-independent protein translocase protein TatA
D I597_0636 tatAy; Sec-independent protein translocase protein TatAy K03116 tatA; sec-independent protein translocase protein TatA
D I597_2706 tatC; Sec-independent protein translocase protein TatC K03118 tatC; sec-independent protein translocase protein TatC
C 02042 Bacterial toxins [BR:ddo02042]
D I597_0097 tlyC; Hemolysin C K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I597_0839 corC_2; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I597_0531 corC_1; Magnesium and cobalt efflux protein CorC K03699 tlyC; magnesium and cobalt exporter, CNNM family
D I597_2046 hemolysin-III related K11068 hlyIII; hemolysin III
C 02022 Two-component system [BR:ddo02022]
D I597_2740 phoR_2; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I597_0957 phoR_1; Alkaline phosphatase synthesis sensor protein PhoR K07636 phoR; two-component system, OmpR family, phosphate regulon sensor histidine kinase PhoR [EC:2.7.13.3]
D I597_0956 phoP_1; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP K07658 phoB1; two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP
D I597_0229 mprA_1; Response regulator MprA K07672 trcR; two-component system, OmpR family, response regulator TrcR
D I597_2739 phoP_2; Alkaline phosphatase synthesis transcriptional regulatory protein PhoP K02483 K02483; two-component system, OmpR family, response regulator
D I597_0177 nreB; Oxygen sensor histidine kinase NreB K02480 K02480; two-component system, NarL family, sensor kinase [EC:2.7.13.3]
D I597_0793 kinD; Sporulation kinase D K13532 kinD; two-component system, sporulation sensor kinase D [EC:2.7.13.3]
D I597_2713 ypdA_3; Sensor histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D I597_0311 ypdA_1; Sensor histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D I597_0351 ypdA_2; Sensor histidine kinase YpdA K02478 K02478; two-component system, LytTR family, sensor kinase [EC:2.7.13.3]
D I597_0310 yehT_1; Transcriptional regulatory protein YehT K02477 K02477; two-component system, LytTR family, response regulator
D I597_0352 yehT_2; Transcriptional regulatory protein YehT K02477 K02477; two-component system, LytTR family, response regulator
D I597_1855 ypdB_2; Transcriptional regulatory protein YpdB K02477 K02477; two-component system, LytTR family, response regulator
D I597_2714 yehT_3; Transcriptional regulatory protein YehT K02477 K02477; two-component system, LytTR family, response regulator
D I597_2039 ypdB_3; Transcriptional regulatory protein YpdB K02477 K02477; two-component system, LytTR family, response regulator
D I597_2681 cph1_10; Phytochrome-like protein cph1 K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D I597_2680 cph1_9; Phytochrome-like protein cph1 K11354 cph1; two-component system, chemotaxis family, sensor kinase Cph1 [EC:2.7.13.3]
D I597_0573 rcsC; Sensor histidine kinase RcsC K11527 K11527; two-component system, sensor histidine kinase and response regulator [EC:2.7.13.3]
C 02035 Bacterial motility proteins [BR:ddo02035]
D I597_2681 cph1_10; Phytochrome-like protein cph1 K13924 cheBR; two-component system, chemotaxis family, CheB/CheR fusion protein [EC:2.1.1.80 3.1.1.61]
D I597_0313 motB_1; Motility protein B K02557 motB; chemotaxis protein MotB
D I597_0412 yiaD_1; putative lipoprotein YiaD precursor K02557 motB; chemotaxis protein MotB
D I597_2452 motB_2; Motility protein B K02557 motB; chemotaxis protein MotB
C 03037 Cilium and associated proteins
C 04812 Cytoskeleton proteins [BR:ddo04812]
D I597_0046 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D I597_1329 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D I597_1328 ftsA; Cell division protein FtsA K03590 ftsA; cell division protein FtsA
D I597_2781 soj; Sporulation initiation inhibitor protein Soj K03496 parA; chromosome partitioning protein
D I597_2782 parB; putative chromosome-partitioning protein ParB K03497 parB; ParB family transcriptional regulator, chromosome partitioning protein
C 04147 Exosome [BR:ddo04147]
D I597_2520 htpG; Chaperone protein HtpG K04079 HSP90A; molecular chaperone HtpG
D I597_1292 eno; Enolase K01689 ENO1_2_3; enolase 1/2/3 [EC:4.2.1.11]
D I597_2884 gap1; Glyceraldehyde-3-phosphate dehydrogenase 1 K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I597_2252 gapA; Glyceraldehyde-3-phosphate dehydrogenase A K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I597_2526 gap; Glyceraldehyde-3-phosphate dehydrogenase K00134 GAPDH; glyceraldehyde 3-phosphate dehydrogenase (phosphorylating) [EC:1.2.1.12]
D I597_0632 pgk; Phosphoglycerate kinase K00927 PGK; phosphoglycerate kinase [EC:2.7.2.3]
D I597_0571 pyk; Pyruvate kinase K00873 PK; pyruvate kinase [EC:2.7.1.40]
D I597_2511 ppiB_2; putative peptidyl-prolyl cis-trans isomerase K03767 PPIA; peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8]
D I597_2157 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
D I597_2562 tsaA; putative peroxiredoxin K03386 PRDX2_4; peroxiredoxin 2/4 [EC:1.11.1.24]
D I597_1990 SPFH domain / Band 7 family protein K17080 PHB1; prohibitin 1
D I597_0032 groL; 60 kDa chaperonin K04077 groEL; chaperonin GroEL [EC:5.6.1.7]
D I597_2506 dnaK; Chaperone protein DnaK K04043 dnaK; molecular chaperone DnaK
D I597_0347 pgi; Glucose-6-phosphate isomerase K01810 GPI; glucose-6-phosphate isomerase [EC:5.3.1.9]
D I597_0093 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
D I597_1683 guaB; Inosine-5'-monophosphate dehydrogenase K00088 IMPDH; IMP dehydrogenase [EC:1.1.1.205]
D I597_2692 tuf; Elongation factor Tu K02358 tuf; elongation factor Tu
D I597_0796 HIT-like protein K02503 HINT1_2; histidine triad (HIT) family protein [EC:3.9.1.-]
D I597_2098 Long-chain-fatty-acid--CoA ligase FadD15 K01897 ACSL; long-chain acyl-CoA synthetase [EC:6.2.1.3]
D I597_2091 putative acetyl-CoA acyltransferase K00626 ACAT; acetyl-CoA C-acetyltransferase [EC:2.3.1.9]
D I597_0827 ahcY; Adenosylhomocysteinase K01251 AHCY; adenosylhomocysteinase [EC:3.13.2.1]
D I597_1220 adk; Adenylate kinase K00939 adk; adenylate kinase [EC:2.7.4.3]
D I597_1876 apt; Adenine phosphoribosyltransferase K00759 APRT; adenine phosphoribosyltransferase [EC:2.4.2.7]
D I597_1163 argH; Argininosuccinate lyase K01755 argH; argininosuccinate lyase [EC:4.3.2.1]
D I597_1156 argG; Argininosuccinate synthase K01940 argG; argininosuccinate synthase [EC:6.3.4.5]
D I597_1883 Fumarylacetoacetate (FAA) hydrolase family protein K01555 FAH; fumarylacetoacetase [EC:3.7.1.2]
D I597_0443 fbp; Fructose-1,6-bisphosphatase class 1 K03841 FBP; fructose-1,6-bisphosphatase I [EC:3.1.3.11]
D I597_1187 galK; Galactokinase K00849 galK; galactokinase [EC:2.7.1.6]
D I597_2625 glgB; 1,4-alpha-glucan branching enzyme GlgB K00700 GBE1; 1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
D I597_1181 glpK; Glycerol kinase K00864 glpK; glycerol kinase [EC:2.7.1.30]
D I597_2491 glnA; Glutamine synthetase K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_2492 glnII; Glutamine synthetase 2 K01915 glnA; glutamine synthetase [EC:6.3.1.2]
D I597_0528 hemB; Delta-aminolevulinic acid dehydratase K01698 hemB; porphobilinogen synthase [EC:4.2.1.24]
D I597_0355 hpd; 4-hydroxyphenylpyruvate dioxygenase K00457 HPD; 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]
D I597_2605 phhB; Putative pterin-4-alpha-carbinolamine dehydratase K01724 PCBD; 4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]
D I597_1203 phoB_1; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D I597_0456 serA_1; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I597_2318 serA_2; D-3-phosphoglycerate dehydrogenase K00058 serA; D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:1.1.1.95 1.1.1.399]
D I597_0045 purH; Bifunctional purine biosynthesis protein PurH K00602 purH; phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]
D I597_1660 lpd3; Dihydrolipoyl dehydrogenase 3 K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_2630 lpdC; Dihydrolipoyl dehydrogenase K00382 DLD; dihydrolipoyl dehydrogenase [EC:1.8.1.4]
D I597_0242 etfA; Electron transfer flavoprotein subunit alpha K03522 fixB; electron transfer flavoprotein alpha subunit
D I597_1648 zwf; Glucose-6-phosphate 1-dehydrogenase K00036 G6PD; glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]
D I597_1545 tpiA; Triosephosphate isomerase K01803 TPI; triosephosphate isomerase (TIM) [EC:5.3.1.1]
D I597_2578 Histidine phosphatase superfamily (branch 1) K01834 PGAM; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]
C 02048 Prokaryotic defense system [BR:ddo02048]
D I597_1965 hsdR; Type-1 restriction enzyme R protein K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
D I597_1959 EcoKI restriction-modification system protein HsdS K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
D I597_1958 putative type I restriction enzymeP M protein K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
D I597_1296 fokIM_2; Modification methylase FokI K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D I597_0659 fokIM_1; Modification methylase FokI K07318 K07318; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D I597_2848 haeIIIM; Modification methylase HaeIII K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D I597_1833 mrr; Mrr restriction system protein K07448 mrr; restriction system protein
D I597_1475 putative DNA-binding transcriptional regulator K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D I597_2543 parE1_1; Toxin ParE1 K19092 parE1_3_4; toxin ParE1/3/4
D I597_2547 parE1_2; Toxin ParE1 K19092 parE1_3_4; toxin ParE1/3/4
D I597_2542 parD1_1; Antitoxin ParD1 K07746 parD1_3_4; antitoxin ParD1/3/4
D I597_2546 parD1_2; Antitoxin ParD1 K07746 parD1_3_4; antitoxin ParD1/3/4
D I597_1329 ftsZ; Cell division protein FtsZ K03531 ftsZ; cell division protein FtsZ
D I597_0046 mreB; Rod shape-determining protein MreB K03569 mreB; rod shape-determining protein MreB and related proteins
D I597_1953 gyrA_1; DNA gyrase subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D I597_1952 parE; DNA topoisomerase 4 subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D I597_0624 gltX; Glutamate--tRNA ligase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
D I597_1622 iscS; Cysteine desulfurase K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C 04030 G protein-coupled receptors [BR:ddo04030]
D I597_1806 Green-light absorbing proteorhodopsin precursor K04643 sop; sensory rhodopsin
C 04050 Cytokine receptors
C 04054 Pattern recognition receptors
C 03310 Nuclear receptors
C 04040 Ion channels
C 04031 GTP-binding proteins
C 04052 Cytokines and neuropeptides
C 04515 Cell adhesion molecules
C 04090 CD molecules [BR:ddo04090]
D I597_0093 ptpA_1; Prolyl tripeptidyl peptidase precursor K01278 DPP4; dipeptidyl-peptidase 4 [EC:3.4.14.5]
C 01504 Antimicrobial resistance genes [BR:ddo01504]
D I597_0769 cat3; Chloramphenicol acetyltransferase 3 K19271 catA; chloramphenicol O-acetyltransferase type A [EC:2.3.1.28]
D I597_2055 BlaR1 peptidase M56 K02172 blaR1; bla regulator protein blaR1
D I597_0869 blaR1; Regulatory protein BlaR1 K02172 blaR1; bla regulator protein blaR1
D I597_0889 BlaR1 peptidase M56 K02172 blaR1; bla regulator protein blaR1
D I597_0870 BlaR1 peptidase M56 K02172 blaR1; bla regulator protein blaR1
D I597_2056 Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I597_0868 blaI; Penicillinase repressor K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I597_0890 mecI; Methicillin resistance regulatory protein MecI K02171 blaI; BlaI family transcriptional regulator, penicillinase repressor
D I597_2226 hypothetical protein K17836 penP; beta-lactamase class A [EC:3.5.2.6]
D I597_2426 ddpX; D-alanyl-D-alanine dipeptidase K08641 vanX; zinc D-Ala-D-Ala dipeptidase [EC:3.4.13.22]
D I597_1084 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_0010 bepC_1; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
D I597_0278 outer membrane channel protein K12340 tolC; outer membrane protein
D I597_2919 bepC_2; Outer membrane efflux protein BepC precursor K12340 tolC; outer membrane protein
C 00535 Proteoglycans
C 00536 Glycosaminoglycan binding proteins
C 00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:ddo00537]
D I597_1203 phoB_1; Alkaline phosphatase 3 precursor K01077 E3.1.3.1; alkaline phosphatase [EC:3.1.3.1]
D I597_1056 treF; Cytoplasmic trehalase K01194 TREH; alpha,alpha-trehalase [EC:3.2.1.28]
D I597_2157 Membrane dipeptidase (Peptidase family M19) K01273 DPEP; membrane dipeptidase [EC:3.4.13.19]
C 04091 Lectins
C 04990 Domain-containing proteins not elsewhere classified [BR:ddo04990]
D I597_2395 Fasciclin domain protein K19519 TGFBI; transforming growth factor-beta-induced protein
B
B 09185 Viral protein families
C 03200 Viral proteins
C 03210 Viral fusion proteins
B
B 09184 RNA family
C 03100 Non-coding RNAs [BR:ddo03100]
D I597_0058 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I597_0592 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I597_1146 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I597_1607 tRNA-Ala K14218 tRNA-Ala; tRNA Ala
D I597_1875 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I597_1332 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I597_1957 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I597_1342 tRNA-Arg K14219 tRNA-Arg; tRNA Arg
D I597_0815 tRNA-Asn K14220 tRNA-Asn; tRNA Asn
D I597_0818 tRNA-Asp K14221 tRNA-Asp; tRNA Asp
D I597_0615 tRNA-Cys K14222 tRNA-Cys; tRNA Cys
D I597_1036 tRNA-Gln K14223 tRNA-Gln; tRNA Gln
D I597_1631 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I597_1632 tRNA-Glu K14224 tRNA-Glu; tRNA Glu
D I597_1232 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I597_2694 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I597_0270 tRNA-Gly K14225 tRNA-Gly; tRNA Gly
D I597_2350 tRNA-His K14226 tRNA-His; tRNA His
D I597_0059 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I597_1145 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I597_1606 tRNA-Ile K14227 tRNA-Ile; tRNA Ile
D I597_0271 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I597_0471 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I597_0892 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I597_1412 tRNA-Leu K14228 tRNA-Leu; tRNA Leu
D I597_1413 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I597_1414 tRNA-Lys K14229 tRNA-Lys; tRNA Lys
D I597_0144 tRNA-Met K14230 tRNA-Met; tRNA Met
D I597_0008 tRNA-Met K14230 tRNA-Met; tRNA Met
D I597_2643 tRNA-Met K14230 tRNA-Met; tRNA Met
D I597_2917 tRNA-Met K14230 tRNA-Met; tRNA Met
D I597_0104 tRNA-Phe K14231 tRNA-Phe; tRNA Phe
D I597_0969 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I597_0967 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I597_1956 tRNA-Pro K14232 tRNA-Pro; tRNA Pro
D I597_1813 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I597_1955 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I597_2900 tRNA-Ser K14233 tRNA-Ser; tRNA Ser
D I597_2693 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I597_1759 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I597_2696 tRNA-Thr K14234 tRNA-Thr; tRNA Thr
D I597_2691 tRNA-Trp K14235 tRNA-Trp; tRNA Trp
D I597_2695 tRNA-Tyr K14236 tRNA-Tyr; tRNA Tyr
D I597_0073 tRNA-Val K14237 tRNA-Val; tRNA Val
D I597_0074 tRNA-Val K14237 tRNA-Val; tRNA Val
D I597_1605 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I597_0060 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I597_1144 16S ribosomal RNA K01977 16SrRNA; 16S ribosomal RNA
D I597_0057 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I597_1147 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I597_1608 23S ribosomal RNA K01980 23SrRNA; 23S ribosomal RNA
D I597_0056 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I597_1148 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I597_1609 5S ribosomal RNA K01985 5SrRNA; 5S ribosomal RNA
D I597_1477 ssrA; transfer-messenger RNA, SsrA K15035 ssrA; transfer-messenger RNA
#
A09190 Not Included in Pathway or Brite
B
B 09191 Unclassified: metabolism
C 99980 Enzymes with EC numbers
D I597_0709 fdhL; Fructose dehydrogenase large subunit K26059 gtd1; glucoside 3-dehydrogenase (cytochrome c) catalytic subunit [EC:1.1.2.11]
D I597_2778 yliI; Soluble aldose sugar dehydrogenase YliI precursor K21430 yliI; aldose sugar dehydrogenase [EC:1.1.5.-]
D I597_1838 Zinc-type alcohol dehydrogenase-like protein K00344 qor; NADPH:quinone reductase [EC:1.6.5.5]
D I597_2237 yfmJ; Putative NADP-dependent oxidoreductase YfmJ K00359 qorA; NADPH:quinone reductase [EC:1.6.5.5]
D I597_2802 ahpF; NADH dehydrogenase K26960 bdr; bacillithiol disulfide reductase [EC:1.8.1.-]
D I597_2889 msrA1; Peptide methionine sulfoxide reductase MsrA 1 K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D I597_0812 mrsA; Peptide methionine sulfoxide reductase MsrA K07304 msrA; peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]
D I597_2628 msrB_1; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D I597_2629 msrB_2; Peptide methionine sulfoxide reductase MsrB K07305 msrB; peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]
D I597_1452 ccp_2; Cytochrome c551 peroxidase precursor K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D I597_0989 ccp_1; Cytochrome c551 peroxidase precursor K00428 E1.11.1.5; cytochrome c peroxidase [EC:1.11.1.5]
D I597_2070 bcp_2; Putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D I597_1758 bcp_1; Putative peroxiredoxin bcp K03564 BCP; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D I597_2565 tpx; putative thiol peroxidase K11065 tpx; thioredoxin-dependent peroxiredoxin [EC:1.11.1.24]
D I597_0726 osmC; Peroxiredoxin OsmC K04063 osmC; lipoyl-dependent peroxiredoxin [EC:1.11.1.28]
D I597_1709 yhhW; Quercetin 2,3-dioxygenase K06911 PIR; quercetin 2,3-dioxygenase [EC:1.13.11.24]
D I597_1807 hypothetical protein K21817 blh; beta-carotene 15,15'-dioxygenase [EC:1.13.11.63]
D I597_2313 arsC_2; Arsenate reductase K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D I597_0752 transcriptional regulator Spx K00537 arsC; arsenate reductase (glutaredoxin) [EC:1.20.4.1]
D I597_0909 arsC_1; Protein ArsC K03741 arsC; arsenate reductase (thioredoxin) [EC:1.20.4.4]
D I597_2731 pcm; Protein-L-isoaspartate O-methyltransferase K00573 E2.1.1.77; protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]
D I597_0384 tpm; Thiopurine S-methyltransferase K21552 HOL; methyl halide transferase [EC:2.1.1.165]
D I597_1160 argF'; N-acetylornithine carbamoyltransferase K13043 argF; N-succinyl-L-ornithine transcarbamylase [EC:2.1.3.11]
D I597_1177 paiA_2; Protease synthase and sporulation negative regulatory protein PAI 1 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D I597_0975 paiA_1; Protease synthase and sporulation negative regulatory protein PAI 1 K22441 paiA; diamine N-acetyltransferase [EC:2.3.1.57]
D I597_1562 maa; Maltose O-acetyltransferase K00661 maa; maltose O-acetyltransferase [EC:2.3.1.79]
D I597_2759 acetyltransferase K03828 yjgM; putative acetyltransferase [EC:2.3.1.-]
D I597_2571 Glutamine cyclotransferase K22757 QCT; glutaminyl-peptide cyclotransferase [EC:2.3.2.5]
D I597_0719 aat; Leucyl/phenylalanyl-tRNA--protein transferase K00684 aat; leucyl/phenylalanyl-tRNA---protein transferase [EC:2.3.2.6]
D I597_2438 Glycogen synthase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D I597_1533 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D I597_1536 cotSA; Spore coat protein SA K00754 bshA; L-malate glycosyltransferase [EC:2.4.1.-]
D I597_2169 putative deoxyhypusine synthase K00809 DHPS; deoxyhypusine synthase [EC:2.5.1.46]
D I597_2717 lgt; Prolipoprotein diacylglyceryl transferase K13292 lgt; phosphatidylglycerol---prolipoprotein diacylglyceryl transferase [EC:2.5.1.145]
D I597_0199 apbE; Thiamine biosynthesis lipoprotein ApbE precursor K03734 apbE; FAD:protein FMN transferase [EC:2.7.1.180]
D I597_2518 disA; DNA integrity scanning protein DisA K18672 dacA; diadenylate cyclase [EC:2.7.7.85]
D I597_0460 Acyl-ACP thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D I597_1584 acyl-CoA thioesterase YbgC K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D I597_0748 Acyl-ACP thioesterase K07107 ybgC; acyl-CoA thioester hydrolase [EC:3.1.2.-]
D I597_2173 ywqE; Tyrosine-protein phosphatase YwqE K01104 E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]
D I597_2263 Histidine phosphatase superfamily (branch 1) K08296 sixA; phosphohistidine phosphatase [EC:3.1.3.-]
D I597_2092 hypothetical protein K07037 pgpH; cyclic-di-AMP phosphodiesterase PgpH [EC:3.1.4.-]
D I597_2903 ycfH; putative deoxyribonuclease YcfH K03424 tatD; TatD DNase family protein [EC:3.1.21.-]
D I597_0300 ybfF; Esterase YbfF K01175 ybfF; esterase [EC:3.1.-.-]
D I597_1134 pbpE; Penicillin-binding protein 4* K01286 E3.4.16.4; D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
D I597_2596 def; Peptide deformylase K01462 PDF; peptide deformylase [EC:3.5.1.88]
D I597_1034 pgdA; Peptidoglycan-N-acetylglucosamine deacetylase K22278 pgdA; peptidoglycan-N-acetylglucosamine deacetylase [EC:3.5.1.104]
D I597_2351 galB; 4-oxalmesaconate hydratase K01463 bshB1; N-acetylglucosamine malate deacetylase 1 [EC:3.5.1.-]
D I597_2448 yabJ; Enamine/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D I597_2005 ridA; Enamine/imine deaminase K09022 ridA; 2-iminobutanoate/2-iminopropanoate deaminase [EC:3.5.99.10]
D I597_1912 nirQ; Denitrification regulatory protein NirQ K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D I597_2295 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D I597_1459 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D I597_0788 ATPase family associated with various cellular activities (AAA) K03924 moxR; MoxR-like ATPase [EC:3.6.3.-]
D I597_2325 nnr; Bifunctional NAD(P)H-hydrate repair enzyme Nnr K23997 nnr; ADP-dependent NAD(P)H-hydrate dehydratase / NAD(P)H-hydrate epimerase [EC:4.2.1.136 5.1.99.6]
D I597_0903 Alginate lyase K20525 alg17C; oligo-alginate lyase [EC:4.2.2.26]
D I597_2470 scpA_2; Methylmalonyl-CoA mutase K11942 icmF; isobutyryl-CoA mutase [EC:5.4.99.13]
D I597_1392 mpl; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase K02558 mpl; UDP-N-acetylmuramate: L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase [EC:6.3.2.45]
D I597_0206 nqrA; Na(+)-translocating NADH-quinone reductase subunit A K00346 nqrA; Na+-transporting NADH:ubiquinone oxidoreductase subunit A [EC:7.2.1.1]
D I597_0205 nqrB; Na(+)-translocating NADH-quinone reductase subunit B K00347 nqrB; Na+-transporting NADH:ubiquinone oxidoreductase subunit B [EC:7.2.1.1]
D I597_0204 nqrC; Na(+)-translocating NADH-quinone reductase subunit C K00348 nqrC; Na+-transporting NADH:ubiquinone oxidoreductase subunit C [EC:7.2.1.1]
D I597_0203 nqrD; Na(+)-translocating NADH-quinone reductase subunit D K00349 nqrD; Na+-transporting NADH:ubiquinone oxidoreductase subunit D [EC:7.2.1.1]
D I597_0202 nqrE; Na(+)-translocating NADH-quinone reductase subunit E K00350 nqrE; Na+-transporting NADH:ubiquinone oxidoreductase subunit E [EC:7.2.1.1]
D I597_0201 nqrF; Na(+)-translocating NADH-quinone reductase subunit F K00351 nqrF; Na+-transporting NADH:ubiquinone oxidoreductase subunit F [EC:7.2.1.1]
D I597_1822 ziaA; Zinc-transporting ATPase K01534 zntA; Zn2+/Cd2+-exporting ATPase [EC:7.2.2.12 7.2.2.21]
C 99981 Carbohydrate metabolism
D I597_1400 hypothetical protein K22136 bshC; bacillithiol synthase
D I597_0710 hypothetical protein K26060 gtd2; glucoside 3-dehydrogenase (cytochrome c) hitch-hiker subunit
C 99982 Energy metabolism
D I597_0241 etfB; Electron transfer flavoprotein subunit beta K03521 fixA; electron transfer flavoprotein beta subunit
D I597_1090 hypothetical protein K09165 K09165; dodecin
C 99983 Lipid metabolism
C 99984 Nucleotide metabolism
C 99985 Amino acid metabolism
D I597_0525 putative sulfate transport protein CysZ K06203 cysZ; CysZ protein
D I597_2735 hypothetical protein K06997 yggS; PLP dependent protein
C 99986 Glycan metabolism
D I597_0407 hypothetical protein K07027 K07027; glycosyltransferase 2 family protein
C 99987 Cofactor metabolism
C 99988 Secondary metabolism
D I597_1636 NADPH-dependent FMN reductase K19784 chrR; chromate reductase, NAD(P)H dehydrogenase (quinone)
C 99999 Others
D I597_0770 hypothetical protein K15977 K15977; putative oxidoreductase
D I597_2074 mhqD; Putative hydrolase MhqD K06999 K06999; phospholipase/carboxylesterase
D I597_0505 hypothetical protein K26958 brxA_B; bacilliredoxin
D I597_2054 hypothetical protein K26959 brxC; monothiol bacilliredoxin
B
B 09192 Unclassified: genetic information processing
C 99973 Transcription
D I597_2146 cspC_1; Cold shock-like protein CspC K03704 cspA; cold shock protein
D I597_2214 cspC_2; Cold shock-like protein CspC K03704 cspA; cold shock protein
D I597_0940 cspV; Cold shock protein CspV K03704 cspA; cold shock protein
D I597_0481 rpsA_1; 30S ribosomal protein S1 K06959 tex; protein Tex
C 99974 Translation
D I597_0475 Beta-lactamase superfamily domain protein K07577 K07577; putative mRNA 3-end processing factor
C 99975 Protein processing
D I597_0976 META domain protein K03668 hslJ; heat shock protein HslJ
D I597_1541 ATP-dependent Clp protease adaptor protein ClpS K06891 clpS; ATP-dependent Clp protease adaptor protein ClpS
D I597_0296 tig; Trigger factor K03545 tig; trigger factor
D I597_1338 putative sulfite oxidase subunit YedZ K17247 msrQ; methionine sulfoxide reductase heme-binding subunit
D I597_2576 smpB; SsrA-binding protein K03664 smpB; SsrA-binding protein
D I597_2662 comM; Competence protein ComM K07391 comM; magnesium chelatase family protein
D I597_0556 hypothetical protein K07397 yhfA; putative redox protein
C 99976 Replication and repair
D I597_0961 ogt_2; Methylated-DNA--protein-cysteine methyltransferase K07443 ybaZ; methylated-DNA-protein-cysteine methyltransferase related protein
D I597_1244 hypothetical protein K03630 radC; DNA repair protein RadC
D I597_2373 rmuC; DNA recombination protein RmuC K09760 rmuC; DNA recombination protein RmuC
D I597_0487 hypothetical protein K07460 yraN; putative endonuclease
D I597_0477 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D I597_0480 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D I597_1377 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D I597_1437 GIY-YIG nuclease superfamily protein K07461 K07461; putative endonuclease
D I597_0693 hypothetical protein K04096 smf; DNA processing protein
D I597_1251 rarA; Replication-associated recombination protein A K07478 ycaJ; putative ATPase
D I597_0536 putative 3'-5' exonuclease related to the exonuclease domain of PolB K07501 K07501; 3'-5' exonuclease
D I597_2133 Transposase IS116/IS110/IS902 family protein K07486 K07486; transposase
D I597_1472 IS2 transposase TnpB K07497 K07497; putative transposase
D I597_1473 Transposase K07497 K07497; putative transposase
D I597_1888 Integrase core domain protein K07497 K07497; putative transposase
C 99979 Viral proteins
C 99998 Others
D I597_2772 hypothetical protein K03969 pspA; phage shock protein A
D I597_1694 Nucleoid-associated protein K09747 ebfC; nucleoid-associated protein EbfC
D I597_0807 cry; Cryptochrome DASH K25656 cry; cryptochrome
B
B 09193 Unclassified: signaling and cellular processes
C 99977 Transport
D I597_1598 hypothetical protein K03292 TC.GPH; glycoside/pentoside/hexuronide:cation symporter, GPH family
D I597_2227 TLC ATP/ADP transporter K03301 TC.AAA; ATP:ADP antiporter, AAA family
D I597_2465 dtpT_2; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D I597_0092 dtpT_1; Di-/tripeptide transporter K03305 TC.POT; proton-dependent oligopeptide transporter, POT family
D I597_1180 yidK; putative symporter YidK K03307 TC.SSS; solute:Na+ symporter, SSS family
D I597_0110 hypothetical protein K03307 TC.SSS; solute:Na+ symporter, SSS family
D I597_0180 sglT_1; Sodium/glucose cotransporter K03307 TC.SSS; solute:Na+ symporter, SSS family
D I597_2669 alsT_1; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D I597_2702 alsT_2; Amino-acid carrier protein AlsT K03310 TC.AGCS; alanine or glycine:cation symporter, AGCS family
D I597_0997 brnQ; Branched-chain amino acid transport system 2 carrier protein K03311 TC.LIVCS; branched-chain amino acid:cation transporter, LIVCS family
D I597_0244 nupX; Nucleoside permease NupX K03317 TC.CNT; concentrative nucleoside transporter, CNT family
C 99978 Cell growth
D I597_0281 CotH protein K06330 cotH; spore coat protein H
D I597_2657 kipA; KipI antagonist K06350 kipA; antagonist of KipI
D I597_0688 envC; Murein hydrolase activator EnvC precursor K22719 envC; murein hydrolase activator
C 99993 Cell motility
C 99995 Signaling proteins
D I597_1558 typA; GTP-binding protein TypA/BipA K06207 typA; GTP-binding protein
D I597_2673 ybeZ; PhoH-like protein K06217 phoH; phosphate starvation-inducible protein PhoH and related proteins
D I597_0422 inosine 5'-monophosphate dehydrogenase K07182 K07182; CBS domain-containing protein
C 99992 Structural proteins
D I597_0308 periplasmic chaperone K06142 hlpA; outer membrane protein
D I597_2300 periplasmic chaperone K06142 hlpA; outer membrane protein
D I597_0630 Outer membrane protein 26 precursor K06142 hlpA; outer membrane protein
D I597_1083 mdtE; Multidrug resistance protein MdtE precursor K02005 ABC.CD.TX; HlyD family secretion protein
D I597_1085 macA; Macrolide export protein MacA K02005 ABC.CD.TX; HlyD family secretion protein
C 99994 Others
D I597_0153 cutC; Copper homeostasis protein CutC K06201 cutC; copper homeostasis protein
D I597_0209 CO2+/MG2+ efflux protein ApaG K06195 apaG; ApaG protein
B
B 09194 Poorly characterized
C 99996 General function prediction only
D I597_0776 Colicin V production protein K03558 cvpA; membrane protein required for colicin V production
D I597_0610 putative acyltransferase K02348 elaA; ElaA protein
D I597_1117 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase K02617 paaY; phenylacetic acid degradation protein
D I597_0230 ctb; globin K06886 glbN; hemoglobin
D I597_0569 rssA_1; NTE family protein RssA K07001 K07001; NTE family protein
D I597_2644 rssA_2; NTE family protein RssA K07001 K07001; NTE family protein
D I597_1246 yjjG; Pyrimidine 5'-nucleotidase YjjG K07025 K07025; putative hydrolase of the HAD superfamily
D I597_2431 dUMP phosphatase K07025 K07025; putative hydrolase of the HAD superfamily
D I597_0982 sufB; FeS cluster assembly protein SufB K09014 sufB; Fe-S cluster assembly protein SufB
D I597_0978 sufD; FeS cluster assembly protein SufD K09015 sufD; Fe-S cluster assembly protein SufD
D I597_0368 hypothetical protein K07038 K07038; inner membrane protein
D I597_2035 hypothetical protein K07058 K07058; membrane protein
D I597_0974 sufE; Cysteine desulfuration protein SufE K02426 sufE; cysteine desulfuration protein SufE
D I597_0546 moeZ_2; putative adenylyltransferase/sulfurtransferase MoeZ K07146 K07146; UPF0176 protein
D I597_1093 LemA family protein K03744 lemA; LemA protein
D I597_1198 hypothetical protein K02742 sprT; SprT protein
D I597_2346 vancomycin high temperature exclusion protein K03748 sanA; SanA protein
D I597_1349 hypothetical protein K00389 yidH; putative membrane protein
D I597_0297 Membrane protein of unknown function K08972 K08972; putative membrane protein
D I597_2583 hypothetical protein K08974 K08974; putative membrane protein
D I597_2582 hypothetical protein K08974 K08974; putative membrane protein
D I597_1075 hypothetical protein K08976 K08976; putative membrane protein
D I597_0426 hypothetical protein K08996 yagU; putative membrane protein
D I597_2390 hypothetical protein K06193 phnA; protein PhnA
C 99997 Function unknown
D I597_0425 Ankyrin repeats (3 copies) K06867 K06867; uncharacterized protein
D I597_1845 ankX; Phosphocholine transferase AnkX K06867 K06867; uncharacterized protein
D I597_1091 hypothetical protein K06872 K06872; uncharacterized protein
D I597_1662 hypothetical protein K06872 K06872; uncharacterized protein
D I597_1979 HD domain protein K06885 K06885; uncharacterized protein
D I597_1089 hypothetical protein K06888 K06888; uncharacterized protein
D I597_1764 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D I597_1808 Alpha/beta hydrolase family protein K06889 K06889; uncharacterized protein
D I597_1809 luxD; Acyl transferase K06889 K06889; uncharacterized protein
D I597_0427 hsaD; 4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase K06889 K06889; uncharacterized protein
D I597_1334 SnoaL-like domain protein K06893 K06893; uncharacterized protein
D I597_2399 Flagellin N-methylase K06940 K06940; uncharacterized protein
D I597_0506 putative hydrolase K06950 K06950; uncharacterized protein
D I597_0501 hypothetical protein K06953 K06953; uncharacterized protein
D I597_0822 Putative neutral zinc metallopeptidase K06973 K06973; uncharacterized protein
D I597_1226 hypothetical protein K06975 K06975; uncharacterized protein
D I597_2663 cocE; Cocaine esterase K06978 K06978; uncharacterized protein
D I597_0565 Succinylglutamate desuccinylase / Aspartoacylase family protein K06987 K06987; uncharacterized protein
D I597_2305 Glyoxalase-like domain protein K06991 K06991; uncharacterized protein
D I597_0168 aminoglycoside/multidrug efflux system K07003 K07003; uncharacterized protein
D I597_0408 Putative esterase K07017 K07017; uncharacterized protein
D I597_0747 putative hydrolase K07019 K07019; uncharacterized protein
D I597_0617 hypothetical protein K07069 K07069; uncharacterized protein
D I597_1212 Epimerase family protein K07071 K07071; uncharacterized protein
D I597_1479 Epimerase family protein K07071 K07071; uncharacterized protein
D I597_0492 hypothetical protein K07086 K07086; uncharacterized protein
D I597_1354 Sulfite exporter TauE/SafE K07090 K07090; uncharacterized protein
D I597_0986 hypothetical protein K07090 K07090; uncharacterized protein
D I597_2512 Calcineurin-like phosphoesterase superfamily domain protein K07095 K07095; uncharacterized protein
D I597_1032 putative metallophosphoesterase K07098 K07098; uncharacterized protein
D I597_1346 hypothetical protein K07112 K07112; uncharacterized protein
D I597_1347 hypothetical protein K07112 K07112; uncharacterized protein
D I597_2246 hypothetical protein K07137 K07137; uncharacterized protein
D I597_2888 Putative zinc ribbon domain protein K07164 K07164; uncharacterized protein
D I597_0243 UvrB/uvrC motif protein K08999 K08999; uncharacterized protein
D I597_2718 hypothetical protein K09005 K09005; uncharacterized protein
D I597_1330 glutamyl-tRNA(Gln) amidotransferase subunit E K09117 K09117; uncharacterized protein
D I597_0330 YciI-like protein K09780 K09780; uncharacterized protein
D I597_0867 hypothetical protein K09793 K09793; uncharacterized protein
D I597_2217 26 kDa periplasmic immunogenic protein precursor K09807 K09807; uncharacterized protein
D I597_1594 hypothetical protein K00243 K00243; uncharacterized protein
D I597_1430 hypothetical protein K09861 K09861; uncharacterized protein
D I597_0115 cofC; 2-phospho-L-lactate guanylyltransferase K09931 K09931; uncharacterized protein
D I597_0107 hypothetical protein K09931 K09931; uncharacterized protein
D I597_2765 hypothetical protein K09940 K09940; uncharacterized protein
D I597_2164 hypothetical protein K09940 K09940; uncharacterized protein
D I597_1575 DNA polymerase III subunit epsilon K09954 K09954; uncharacterized protein
D I597_2114 hypothetical protein K09966 K09966; uncharacterized protein
D I597_1892 hypothetical protein K09977 K09977; uncharacterized protein
D I597_0362 hypothetical protein K09984 K09984; uncharacterized protein
D I597_0987 Trehalose utilization K09992 K09992; uncharacterized protein
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#[ KO | BRITE | KEGG2 | KEGG ]
#Last updated: May 9, 2024