+E Ribosome biogenesis KO
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Ribosome Biogenesis - Dehalococcoides mccartyi BTF08
%
!
AEukaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B 90S particles
C U3 small nucleolar RNA-associated proteins
C Helicases
C GTPase
C RNase
D btf_979 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C Kinase
C Other 90S particles
B Pre-40S particles
C Kinases
C Export and cytoplasmic maturation factors
C Other pre-40S particles
B Pre-60S particles
C Helicases
C GTPases
C RNases
D RNase MRP
C Kinases
C Export and cytoplasmic maturation factors
C 5-FMC complex
C Ribosome quality control proteins
C Other pre-60S particles
B Other ribosome biogenesis factors
C btf_2 obgE; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
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AProkaryotic type
B Sno RNPs
C Box C/D snoRNPs
C Box H/ACA snoRNPs
B rRNA transcription factors
C btf_1251 putative transcriptional regulator, DksA/TraR family K06204 dksA; RNA polymerase-binding transcription factor
C btf_934 nusA; transcription termination protein NusA K02600 nusA; transcription termination/antitermination protein NusA
C btf_1156 nusB; transcription termination protein NusB K03625 nusB; transcription antitermination protein NusB
C btf_943 nusG; transcription antitermination protein NusG K02601 nusG; transcription termination/antitermination protein NusG
B rRNA modification factors
C 16S rRNA modification factors
D btf_370 rsmA; ribosomal RNA small subunit methyltransferase A K02528 ksgA; 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182]
D btf_129 putative ribosomal RNA small subunit methyltransferase K08316 rsmD; 16S rRNA (guanine966-N2)-methyltransferase [EC:2.1.1.171]
D btf_698 gidB; ribosomal RNA small subunit methyltransferase G K03501 gidB; 16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]
D btf_316 mraW; ribosomal RNA small subunit methyltransferase H K03438 mraW; 16S rRNA (cytosine1402-N4)-methyltransferase [EC:2.1.1.199]
D btf_353 tetrapyrrole methylase superfamily protein K07056 rsmI; 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198]
C 23S rRNA modification factors
D btf_1019 RNA methyltransferase, TrmA family K03215 rumA; 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
D btf_712 rsuA; pseudouridine synthase, RsuA family K06178 rluB; 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
D btf_1253 ribosomal large subunit pseudouridine synthase, RluD subfamily K06180 rluD; 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]
B ribosomal protein modification factors
C btf_569 ribosomal-protein-alanine acetyltransferase K03789 rimI; [ribosomal protein S18]-alanine N-acetyltransferase [EC:2.3.1.266]
C btf_527 16S rRNA processing protein RimM K02860 rimM; 16S rRNA processing protein RimM
B rRNA processing factors
C btf_979 rnc; ribonuclease III K03685 rnc; ribonuclease III [EC:3.1.26.3]
C btf_49 holliday junction resolvase-like protein K07447 ruvX; putative pre-16S rRNA nuclease [EC:3.1.-.-]
B rRNA helicases
B GTPases
C btf_1273 GTP-binding protein EngA K03977 engA; GTPase
C btf_2 obgE; GTPase Obg K03979 obgE; GTPase [EC:3.6.5.-]
C btf_659 GTP-binding protein HflX K03665 hflX; GTPase
B Other maturation factors
C btf_756 YrdC/Sua5 family protein K07566 tsaC; L-threonylcarbamoyladenylate synthase [EC:2.7.7.87]
C btf_5 relA; GTP pyrophosphokinase, (p)ppGpp synthetase I K01139 spoT; GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:2.7.6.5 3.1.7.2]
C btf_931 ribosome-binding factor A K02834 rbfA; ribosome-binding factor A
C btf_359 Iojap protein K09710 ybeB; ribosome-associated protein
C btf_1248 hypothetical protein K07042 ybeY; probable rRNA maturation factor
C btf_1335 ribosomal subunit interface protein K05808 hpf; ribosome hibernation promoting factor
C btf_43 GTP-binding and nucleic acid-binding protein YchF K06942 ychF; ribosome-binding ATPase
C btf_1152 hypothetical protein K07040 yceD; DUF177 domain-containing protein
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ARelated small nucleolar RNAs
B Box C/D snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for 2'-O-ribose methylation
B Box H/ACA snoRNAs
C SnoRNAs involved in processing reactions
C SnoRNAs act as guides for pseudouridynation
B Other snoRNA
!
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: April 22, 2024