+D Messenger RNA Biogenesis KO #

  Prokaryotic Defense System - Denitratisoma oestradiolicum

% ! ACRISPR-Cas system B Universal Cas proteins C DENOEST_0921 ygbT; conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1 C DENOEST_0922 ygbF; hypothetical protein K09951 cas2; CRISPR-associated protein Cas2 B Type I CRISPR-Cas system C Type I signiture cas proteins D DENOEST_0913 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4] C Subtype I-A factors D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-B factors D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-C factors D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-D factors D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] C Subtype I-E factors D DENOEST_0914 putative CRISPR system Cascade subunit CasA K19123 casA; CRISPR system Cascade subunit CasA D DENOEST_0915 conserved protein of unknown function K19046 casB; CRISPR system Cascade subunit CasB D DENOEST_0916 CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E K19124 casC; CRISPR system Cascade subunit CasC D DENOEST_0917 conserved protein of unknown function K19125 casD; CRISPR system Cascade subunit CasD D DENOEST_0918 putative CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE C Subtype I-F factors C Subtype I-U factors B Type II CRISPR-Cas system C Type II signiture cas proteins C Subtype II-A factors C Subtype II-B factors D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1] B Type III CRISPR-Cas system C Type III signiture cas proteins C Subtype III-A factors C Subtype III-B factors C Subtype III-U factors # ARestriction and modification system (R-M system) B Type I R-M system C DENOEST_2152 conserved protein of unknown function K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C DENOEST_3000 Type I restriction-modification system R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3] C DENOEST_2154 Restriction endonuclease subunit S (fragment) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C DENOEST_3004 conserved protein of unknown function K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3] C DENOEST_2153 conserved protein of unknown function K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] C DENOEST_3003 putative Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72] B Type II R-M system C Restriction endonucleases D DENOEST_1706 Type II restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] D DENOEST_1864 Type II restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4] C DNA methyltransferases D DENOEST_0275 Eco57I restriction endonuclease K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72] D DENOEST_P0083 conserved protein of unknown function K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DENOEST_P0179 conserved protein of unknown function K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] D DENOEST_P0180 C-5 cytosine-specific DNA methylase (fragment) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] B Type III R-M system B Type IV R-M system C DENOEST_3972 conserved protein of unknown function K07448 mrr; restriction system protein C DENOEST_0045 conserved protein of unknown function K07448 mrr; restriction system protein # AToxin-antitoxin system (TA system) B Type I TA system C Hok-Sok C SymE-SymR C Ldr-Rdl C TisB-IstR C Ibs-Sib C ShoB-OhsC C RalR-RalA B Type II TA system C MazF-MazE C ChpB-ChpS C YhaV-PrlF C RelE/StbE-RelB/StbD C YafQ-dinJ D DENOEST_3848 Addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D DENOEST_P0091 yafQ; toxin of the YafQ-DinJ toxin-antitoxin system K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-] D DENOEST_3847 Translation repressor RelB K07473 dinJ; DNA-damage-inducible protein J D DENOEST_P0092 putative addiction module antitoxin component DinJ K07473 dinJ; DNA-damage-inducible protein J C YoeB-YefM D DENOEST_2772 yoeB; toxin of the YoeB-YefM toxin-antitoxin system K19158 yoeB; toxin YoeB [EC:3.1.-.-] D DENOEST_2773 yefM; antitoxin of the YoeB-YefM toxin-antitoxin system K19159 yefM; antitoxin YefM C HipA-HipB D DENOEST_1771 Phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DENOEST_1900 Phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DENOEST_3618 conserved protein of unknown function K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DENOEST_0104 putative kinase Y4mE K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1] D DENOEST_0105 Uncharacterized HTH-type transcriptional regulator y4mF K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB C HicA-HicB C YafO-YafN C Hha-TomB C PspC-PspB C CcdB-CcdA C ParE-ParD C Doc-Phd C HigB-HigA D DENOEST_3995 conserved protein of unknown function K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D DENOEST_0069 conserved protein of unknown function K19166 higB; mRNA interferase HigB [EC:3.1.-.-] D DENOEST_0400 conserved protein of unknown function K07334 higB-1; toxin HigB-1 D DENOEST_3994 Transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA D DENOEST_0068 Transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA C MqsR-MqsA C VapC-VapB C PezT-PezA C YobL-YobK C YokI-YokJ C YqcG-YqcF C YxiD-YxxD C FitB-FitA C BC_0920-BC_0921 C Type II TA system related factors D DENOEST_3079 ftsZ; GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ D DENOEST_0573 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins D DENOEST_3358 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2] D DENOEST_3357 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2] D DENOEST_0634 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17] B Type III TA system C AbiQ system B Type IV TA system C YeeV-YeeU C CptA-CptB D DENOEST_2210 conserved protein of unknown function K19168 cptA; toxin CptA D DENOEST_2143 conserved protein of unknown function K09159 cptB; antitoxin CptB B Type V TA system C GhoT-GhoS # ADNA phosphothiolation system B Sulfur modification proteins C DENOEST_1543 iscS; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7] C DENOEST_1544 iscS; cysteine desulfurase used in synthesis of Fe-S cluster (tRNA 4-thiouridine sulfurtransferase) K04487 iscS; cysteine desulfurase [EC:2.8.1.7] B DNA phosphorothioation-dependent restriction proteins ! #
#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023