+D Messenger RNA Biogenesis KO
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Prokaryotic Defense System - Denitratisoma oestradiolicum
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ACRISPR-Cas system
B Universal Cas proteins
C DENOEST_0921 ygbT; conserved hypothetical protein K15342 cas1; CRISP-associated protein Cas1
C DENOEST_0922 ygbF; hypothetical protein K09951 cas2; CRISPR-associated protein Cas2
B Type I CRISPR-Cas system
C Type I signiture cas proteins
D DENOEST_0913 CRISPR-associated helicase/endonuclease Cas3 K07012 cas3; CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
C Subtype I-A factors
D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-B factors
D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-C factors
D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-D factors
D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
C Subtype I-E factors
D DENOEST_0914 putative CRISPR system Cascade subunit CasA K19123 casA; CRISPR system Cascade subunit CasA
D DENOEST_0915 conserved protein of unknown function K19046 casB; CRISPR system Cascade subunit CasB
D DENOEST_0916 CRISPR-associated protein Cas7/Cse4/CasC, subtype I-E K19124 casC; CRISPR system Cascade subunit CasC
D DENOEST_0917 conserved protein of unknown function K19125 casD; CRISPR system Cascade subunit CasD
D DENOEST_0918 putative CRISPR-associated protein, Cse3 family K19126 casE; CRISPR system Cascade subunit CasE
C Subtype I-F factors
C Subtype I-U factors
B Type II CRISPR-Cas system
C Type II signiture cas proteins
C Subtype II-A factors
C Subtype II-B factors
D DENOEST_P0016 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
D DENOEST_P0115 conserved protein of unknown function K07464 cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]
B Type III CRISPR-Cas system
C Type III signiture cas proteins
C Subtype III-A factors
C Subtype III-B factors
C Subtype III-U factors
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ARestriction and modification system (R-M system)
B Type I R-M system
C DENOEST_2152 conserved protein of unknown function K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C DENOEST_3000 Type I restriction-modification system R subunit K01153 hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]
C DENOEST_2154 Restriction endonuclease subunit S (fragment) K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C DENOEST_3004 conserved protein of unknown function K01154 hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]
C DENOEST_2153 conserved protein of unknown function K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
C DENOEST_3003 putative Site-specific DNA-methyltransferase (adenine-specific) K03427 hsdM; type I restriction enzyme M protein [EC:2.1.1.72]
B Type II R-M system
C Restriction endonucleases
D DENOEST_1706 Type II restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
D DENOEST_1864 Type II restriction endonuclease K01155 E3.1.21.4; type II restriction enzyme [EC:3.1.21.4]
C DNA methyltransferases
D DENOEST_0275 Eco57I restriction endonuclease K07317 K07317; adenine-specific DNA-methyltransferase [EC:2.1.1.72]
D DENOEST_P0083 conserved protein of unknown function K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DENOEST_P0179 conserved protein of unknown function K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
D DENOEST_P0180 C-5 cytosine-specific DNA methylase (fragment) K00558 DNMT1; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]
B Type III R-M system
B Type IV R-M system
C DENOEST_3972 conserved protein of unknown function K07448 mrr; restriction system protein
C DENOEST_0045 conserved protein of unknown function K07448 mrr; restriction system protein
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AToxin-antitoxin system (TA system)
B Type I TA system
C Hok-Sok
C SymE-SymR
C Ldr-Rdl
C TisB-IstR
C Ibs-Sib
C ShoB-OhsC
C RalR-RalA
B Type II TA system
C MazF-MazE
C ChpB-ChpS
C YhaV-PrlF
C RelE/StbE-RelB/StbD
C YafQ-dinJ
D DENOEST_3848 Addiction module toxin, RelE/StbE family K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D DENOEST_P0091 yafQ; toxin of the YafQ-DinJ toxin-antitoxin system K19157 yafQ; mRNA interferase YafQ [EC:3.1.-.-]
D DENOEST_3847 Translation repressor RelB K07473 dinJ; DNA-damage-inducible protein J
D DENOEST_P0092 putative addiction module antitoxin component DinJ K07473 dinJ; DNA-damage-inducible protein J
C YoeB-YefM
D DENOEST_2772 yoeB; toxin of the YoeB-YefM toxin-antitoxin system K19158 yoeB; toxin YoeB [EC:3.1.-.-]
D DENOEST_2773 yefM; antitoxin of the YoeB-YefM toxin-antitoxin system K19159 yefM; antitoxin YefM
C HipA-HipB
D DENOEST_1771 Phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DENOEST_1900 Phosphatidylinositol kinase K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DENOEST_3618 conserved protein of unknown function K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DENOEST_0104 putative kinase Y4mE K07154 hipA; serine/threonine-protein kinase HipA [EC:2.7.11.1]
D DENOEST_0105 Uncharacterized HTH-type transcriptional regulator y4mF K15773 hipB; HTH-type transcriptional regulator / antitoxin HipB
C HicA-HicB
C YafO-YafN
C Hha-TomB
C PspC-PspB
C CcdB-CcdA
C ParE-ParD
C Doc-Phd
C HigB-HigA
D DENOEST_3995 conserved protein of unknown function K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D DENOEST_0069 conserved protein of unknown function K19166 higB; mRNA interferase HigB [EC:3.1.-.-]
D DENOEST_0400 conserved protein of unknown function K07334 higB-1; toxin HigB-1
D DENOEST_3994 Transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
D DENOEST_0068 Transcriptional regulator K18831 higA; HTH-type transcriptional regulator / antitoxin HigA
C MqsR-MqsA
C VapC-VapB
C PezT-PezA
C YobL-YobK
C YokI-YokJ
C YqcG-YqcF
C YxiD-YxxD
C FitB-FitA
C BC_0920-BC_0921
C Type II TA system related factors
D DENOEST_3079 ftsZ; GTP-binding tubulin-like cell division protein K03531 ftsZ; cell division protein FtsZ
D DENOEST_0573 mreB; rod shape-determining protein K03569 mreB; rod shape-determining protein MreB and related proteins
D DENOEST_3358 parC; DNA topoisomerase 4 subunit A K02621 parC; topoisomerase IV subunit A [EC:5.6.2.2]
D DENOEST_3357 parE; DNA topoisomerase IV, subunit B K02622 parE; topoisomerase IV subunit B [EC:5.6.2.2]
D DENOEST_0634 gltX; glutamyl-tRNA synthetase K01885 EARS; glutamyl-tRNA synthetase [EC:6.1.1.17]
B Type III TA system
C AbiQ system
B Type IV TA system
C YeeV-YeeU
C CptA-CptB
D DENOEST_2210 conserved protein of unknown function K19168 cptA; toxin CptA
D DENOEST_2143 conserved protein of unknown function K09159 cptB; antitoxin CptB
B Type V TA system
C GhoT-GhoS
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ADNA phosphothiolation system
B Sulfur modification proteins
C DENOEST_1543 iscS; cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
C DENOEST_1544 iscS; cysteine desulfurase used in synthesis of Fe-S cluster (tRNA 4-thiouridine sulfurtransferase) K04487 iscS; cysteine desulfurase [EC:2.8.1.7]
B DNA phosphorothioation-dependent restriction proteins
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#[ BRITE | KEGG2 | KEGG ]
#Last updated: November 7, 2023